#pragma once #include #include /* MANSEC = DM */ /* SUBMANSEC = DMSwarm */ typedef struct _p_DMSwarmDataField *DMSwarmDataField; typedef struct _p_DMSwarmDataBucket *DMSwarmDataBucket; typedef struct _p_DMSwarmSort *DMSwarmSort; /*E DMSwarmType - Defines the type of `DMSWARM` Values: + `DMSWARM_BASIC` - defines N entries of varied data-types which the user may register. - `DMSWARM_PIC` - suitable for particle-in-cell methods. Configured as `DMSWARM_PIC`, the swarm will be aware of, another `DM` which serves as the background mesh. Fields specific to particle-in-cell methods are registered by default. These include spatial coordinates, a unique identifier, a cell index and an index for the owning rank. The background mesh will (by default) define the spatial decomposition of the points defined in the swarm. `DMSWARM_PIC` provides support for particle-in-cell operations such as defining initial point coordinates, communicating particles between sub-domains, projecting particle data fields on to the mesh. Level: beginner .seealso: [](ch_dmbase), `DMSWARM`, `DMSwarmSetType()` E*/ typedef enum { DMSWARM_BASIC, DMSWARM_PIC } DMSwarmType; PETSC_EXTERN const char *DMSwarmTypeNames[]; typedef enum { DMSWARM_MIGRATE_BASIC, DMSWARM_MIGRATE_DMCELLNSCATTER, DMSWARM_MIGRATE_DMCELLEXACT, DMSWARM_MIGRATE_USER } DMSwarmMigrateType; PETSC_EXTERN const char *DMSwarmMigrateTypeNames[]; typedef enum { DMSWARM_COLLECT_BASIC, DMSWARM_COLLECT_DMDABOUNDINGBOX, DMSWARM_COLLECT_GENERAL, DMSWARM_COLLECT_USER } DMSwarmCollectType; PETSC_EXTERN const char *DMSwarmCollectTypeNames[]; typedef enum { DMSWARM_REMAP_NONE = 0, DMSWARM_REMAP_PFAK = 1, DMSWARM_REMAP_COLELLA = 2 } DMSwarmRemapType; PETSC_EXTERN const char *DMSwarmRemapTypeNames[]; /*E DMSwarmPICLayoutType - Defines the method used to define particle coordinates within each cell. The layouts are constructured using the reference cell geometry Values: + `DMSWARMPIC_LAYOUT_REGULAR` - defines points on a regular ijk mesh. In this case the `fill_param` argument of `DMSwarmInsertPointsUsingCellDM()` defines the number of points in each spatial direction. . `DMSWARMPIC_LAYOUT_GAUSS` - defines points using an npoint Gauss-Legendre tensor product quadrature rule. In this case the `fill_param` argument of `DMSwarmInsertPointsUsingCellDM()` defines the number of quadrature points in each spatial direction. - `DMSWARMPIC_LAYOUT_SUBDIVISION` - defines points on the centroid of a sub-divided reference cell. In this case the `fill_param` argument of `DMSwarmInsertPointsUsingCellDM()` defines the number times the reference cell is sub-divided. Level: beginner .seealso: [](ch_dmbase), `DMSWARM`, `DM`, `DMSwarmInsertPointsUsingCellDM()` E*/ typedef enum { DMSWARMPIC_LAYOUT_REGULAR, DMSWARMPIC_LAYOUT_GAUSS, DMSWARMPIC_LAYOUT_SUBDIVISION } DMSwarmPICLayoutType; /*S DMSwarmCellDM - PETSc object for defining a background `DM` for the `DMSWARM` particles Level: intermediate .seealso: [](ch_dmbase), `DM`, `DMSwarmAddCellDM()`, `DMSwarmCellDMCreate()` S*/ typedef struct _p_DMSwarmCellDM *DMSwarmCellDM; PETSC_EXTERN PetscClassId DMSWARMCELLDM_CLASSID; PETSC_EXTERN const char DMSwarmField_pid[]; PETSC_EXTERN const char DMSwarmField_rank[]; PETSC_EXTERN const char DMSwarmPICField_coor[]; PETSC_EXTERN PetscErrorCode DMSwarmCreateGlobalVectorFromField(DM, const char[], Vec *); PETSC_EXTERN PetscErrorCode DMSwarmDestroyGlobalVectorFromField(DM, const char[], Vec *); PETSC_EXTERN PetscErrorCode DMSwarmCreateLocalVectorFromField(DM, const char[], Vec *); PETSC_EXTERN PetscErrorCode DMSwarmDestroyLocalVectorFromField(DM, const char[], Vec *); PETSC_EXTERN PetscErrorCode DMSwarmCreateGlobalVectorFromFields(DM, PetscInt, const char *[], Vec *); PETSC_EXTERN PetscErrorCode DMSwarmDestroyGlobalVectorFromFields(DM, PetscInt, const char *[], Vec *); PETSC_EXTERN PetscErrorCode DMSwarmCreateLocalVectorFromFields(DM, PetscInt, const char *[], Vec *); PETSC_EXTERN PetscErrorCode DMSwarmDestroyLocalVectorFromFields(DM, PetscInt, const char *[], Vec *); PETSC_EXTERN PetscErrorCode DMSwarmInitializeFieldRegister(DM); PETSC_EXTERN PetscErrorCode DMSwarmFinalizeFieldRegister(DM); PETSC_EXTERN PetscErrorCode DMSwarmSetLocalSizes(DM, PetscInt, PetscInt); PETSC_EXTERN PetscErrorCode DMSwarmRegisterPetscDatatypeField(DM, const char[], PetscInt, PetscDataType); PETSC_EXTERN PetscErrorCode DMSwarmRegisterUserStructField(DM, const char[], size_t); PETSC_EXTERN PetscErrorCode DMSwarmRegisterUserDatatypeField(DM, const char[], size_t, PetscInt); PETSC_EXTERN PetscErrorCode DMSwarmGetField(DM, const char[], PetscInt *, PetscDataType *, void **); PETSC_EXTERN PetscErrorCode DMSwarmRestoreField(DM, const char[], PetscInt *, PetscDataType *, void **); PETSC_EXTERN PetscErrorCode DMSwarmGetFieldInfo(DM, const char[], PetscInt *, PetscDataType *); PETSC_EXTERN PetscErrorCode DMSwarmVectorDefineField(DM, const char[]); PETSC_EXTERN PetscErrorCode DMSwarmVectorDefineFields(DM, PetscInt, const char *[]); PETSC_EXTERN PetscErrorCode DMSwarmVectorGetField(DM, PetscInt *, const char **[]); PETSC_EXTERN PetscErrorCode DMSwarmAddPoint(DM); PETSC_EXTERN PetscErrorCode DMSwarmAddNPoints(DM, PetscInt); PETSC_EXTERN PetscErrorCode DMSwarmRemovePoint(DM); PETSC_EXTERN PetscErrorCode DMSwarmRemovePointAtIndex(DM, PetscInt); PETSC_EXTERN PetscErrorCode DMSwarmCopyPoint(DM, PetscInt, PetscInt); PETSC_EXTERN PetscErrorCode DMSwarmGetLocalSize(DM, PetscInt *); PETSC_EXTERN PetscErrorCode DMSwarmGetSize(DM, PetscInt *); PETSC_EXTERN PetscErrorCode DMSwarmGetMigrateType(DM, DMSwarmMigrateType *); PETSC_EXTERN PetscErrorCode DMSwarmSetMigrateType(DM, DMSwarmMigrateType); PETSC_EXTERN PetscErrorCode DMSwarmMigrate(DM, PetscBool); PETSC_EXTERN PetscErrorCode DMSwarmCollectViewCreate(DM); PETSC_EXTERN PetscErrorCode DMSwarmCollectViewDestroy(DM); PETSC_EXTERN PetscErrorCode DMSwarmSetCellDM(DM, DM); PETSC_EXTERN PetscErrorCode DMSwarmGetCellDM(DM, DM *); PETSC_EXTERN PetscErrorCode DMSwarmGetCellDMByName(DM, const char[], DMSwarmCellDM *); PETSC_EXTERN PetscErrorCode DMSwarmGetCellDMNames(DM, PetscInt *, const char **[]); PETSC_EXTERN PetscErrorCode DMSwarmSetCellDMActive(DM, const char[]); PETSC_EXTERN PetscErrorCode DMSwarmGetCellDMActive(DM, DMSwarmCellDM *); PETSC_EXTERN PetscErrorCode DMSwarmAddCellDM(DM, DMSwarmCellDM); PETSC_EXTERN PetscErrorCode DMSwarmGetType(DM, DMSwarmType *); PETSC_EXTERN PetscErrorCode DMSwarmSetType(DM, DMSwarmType); PETSC_EXTERN PetscErrorCode DMSwarmSetPointsUniformCoordinates(DM, PetscReal *, PetscReal *, PetscInt *, InsertMode); PETSC_EXTERN PetscErrorCode DMSwarmSetPointCoordinates(DM, PetscInt, PetscReal *, PetscBool, InsertMode); PETSC_EXTERN PetscErrorCode DMSwarmInsertPointsUsingCellDM(DM, DMSwarmPICLayoutType, PetscInt); PETSC_EXTERN PetscErrorCode DMSwarmSetPointCoordinatesCellwise(DM, PetscInt, PetscReal *); PETSC_EXTERN PetscErrorCode DMSwarmSetPointCoordinatesRandom(DM, PetscInt); PETSC_EXTERN PetscErrorCode DMSwarmViewFieldsXDMF(DM, const char *, PetscInt, const char **); PETSC_EXTERN PetscErrorCode DMSwarmViewXDMF(DM, const char *); PETSC_EXTERN PetscErrorCode DMSwarmSortDestroy(DMSwarmSort *); PETSC_EXTERN PetscErrorCode DMSwarmSortGetAccess(DM); PETSC_EXTERN PetscErrorCode DMSwarmSortRestoreAccess(DM); PETSC_EXTERN PetscErrorCode DMSwarmSortGetPointsPerCell(DM, PetscInt, PetscInt *, PetscInt **); PETSC_EXTERN PetscErrorCode DMSwarmSortRestorePointsPerCell(DM, PetscInt, PetscInt *, PetscInt **); PETSC_EXTERN PetscErrorCode DMSwarmSortGetNumberOfPointsPerCell(DM, PetscInt, PetscInt *); PETSC_EXTERN PetscErrorCode DMSwarmSortGetIsValid(DM, PetscBool *); PETSC_EXTERN PetscErrorCode DMSwarmSortGetSizes(DM, PetscInt *, PetscInt *); PETSC_EXTERN PetscErrorCode DMSwarmCreateMassMatrixSquare(DM, DM, Mat *); PETSC_EXTERN PetscErrorCode DMSwarmGetCellSwarm(DM, PetscInt, DM); PETSC_EXTERN PetscErrorCode DMSwarmRestoreCellSwarm(DM, PetscInt, DM); PETSC_EXTERN PetscErrorCode DMSwarmGetNumSpecies(DM, PetscInt *); PETSC_EXTERN PetscErrorCode DMSwarmSetNumSpecies(DM, PetscInt); PETSC_EXTERN PetscErrorCode DMSwarmGetCoordinateFunction(DM, PetscErrorCode (**)(PetscInt, PetscReal, const PetscReal[], PetscInt, PetscScalar[], void *)); PETSC_EXTERN PetscErrorCode DMSwarmSetCoordinateFunction(DM, PetscErrorCode (*)(PetscInt, PetscReal, const PetscReal[], PetscInt, PetscScalar[], void *)); PETSC_EXTERN PetscErrorCode DMSwarmGetVelocityFunction(DM, PetscErrorCode (**)(PetscInt, PetscReal, const PetscReal[], PetscInt, PetscScalar[], void *)); PETSC_EXTERN PetscErrorCode DMSwarmSetVelocityFunction(DM, PetscErrorCode (*)(PetscInt, PetscReal, const PetscReal[], PetscInt, PetscScalar[], void *)); PETSC_EXTERN PetscErrorCode DMSwarmComputeLocalSize(DM, PetscInt, PetscProbFn *); PETSC_EXTERN PetscErrorCode DMSwarmComputeLocalSizeFromOptions(DM); PETSC_EXTERN PetscErrorCode DMSwarmInitializeCoordinates(DM); PETSC_EXTERN PetscErrorCode DMSwarmInitializeVelocities(DM, PetscProbFn *, const PetscReal[]); PETSC_EXTERN PetscErrorCode DMSwarmInitializeVelocitiesFromOptions(DM, const PetscReal[]); PETSC_EXTERN PetscErrorCode DMSwarmCreatePointPerCellCount(DM, PetscInt *, PetscInt **); // Interface to internal storage PETSC_EXTERN PetscErrorCode DMSwarmDataFieldGetEntries(const DMSwarmDataField, void **); PETSC_EXTERN PetscErrorCode DMSwarmDataFieldRestoreEntries(const DMSwarmDataField, void **); PETSC_EXTERN PetscErrorCode DMSwarmDataBucketGetDMSwarmDataFieldByName(DMSwarmDataBucket, const char[], DMSwarmDataField *); PETSC_EXTERN PetscErrorCode DMSwarmDataBucketGetDMSwarmDataFieldIdByName(DMSwarmDataBucket, const char[], PetscInt *); PETSC_EXTERN PetscErrorCode DMSwarmDataBucketQueryDMSwarmDataFieldByName(DMSwarmDataBucket, const char[], PetscBool *); PETSC_EXTERN PetscErrorCode DMSwarmDuplicate(DM, DM *); PETSC_EXTERN PetscErrorCode DMSwarmRemap(DM); PETSC_EXTERN PetscErrorCode DMSwarmReplace(DM, DM *); PETSC_EXTERN PetscErrorCode DMSwarmComputeMoments(DM, const char[], const char[], PetscReal[]); PETSC_EXTERN PetscErrorCode DMSwarmCellDMCreate(DM, PetscInt, const char *[], PetscInt, const char *[], DMSwarmCellDM *); PETSC_EXTERN PetscErrorCode DMSwarmCellDMDestroy(DMSwarmCellDM *); PETSC_EXTERN PetscErrorCode DMSwarmCellDMView(DMSwarmCellDM, PetscViewer); PETSC_EXTERN PetscErrorCode DMSwarmCellDMGetDM(DMSwarmCellDM, DM *); PETSC_EXTERN PetscErrorCode DMSwarmCellDMGetFields(DMSwarmCellDM, PetscInt *, const char **[]); PETSC_EXTERN PetscErrorCode DMSwarmCellDMGetCoordinateFields(DMSwarmCellDM, PetscInt *, const char **[]); PETSC_EXTERN PetscErrorCode DMSwarmCellDMGetCellID(DMSwarmCellDM, const char *[]); PETSC_EXTERN PetscErrorCode DMSwarmCellDMGetSort(DMSwarmCellDM, DMSwarmSort *); PETSC_EXTERN PetscErrorCode DMSwarmCellDMSetSort(DMSwarmCellDM, DMSwarmSort); PETSC_EXTERN PetscErrorCode DMSwarmCellDMGetBlockSize(DMSwarmCellDM, DM, PetscInt *);