/* Plots vectors obtained with DMDACreate1d() */ #include /*I "petscdmda.h" I*/ #undef __FUNCT__ #define __FUNCT__ "DMDASetUniformCoordinates" /*@ DMDASetUniformCoordinates - Sets a DMDA coordinates to be a uniform grid Collective on DMDA Input Parameters: + da - the distributed array object . xmin,xmax - extremes in the x direction . ymin,ymax - extremes in the y direction (use PETSC_NULL for 1 dimensional problems) - zmin,zmax - extremes in the z direction (use PETSC_NULL for 1 or 2 dimensional problems) Level: beginner .seealso: DMDASetCoordinates(), DMDAGetCoordinates(), DMDACreate1d(), DMDACreate2d(), DMDACreate3d() @*/ PetscErrorCode DMDASetUniformCoordinates(DM da,PetscReal xmin,PetscReal xmax,PetscReal ymin,PetscReal ymax,PetscReal zmin,PetscReal zmax) { MPI_Comm comm; DM cda; DMDABoundaryType bx,by,bz; Vec xcoor; PetscScalar *coors; PetscReal hx,hy,hz_; PetscInt i,j,k,M,N,P,istart,isize,jstart,jsize,kstart,ksize,dim,cnt; PetscErrorCode ierr; PetscFunctionBegin; if (xmax <= xmin) SETERRQ2(((PetscObject)da)->comm,PETSC_ERR_ARG_INCOMP,"xmax must be larger than xmin %G %G",xmin,xmax); ierr = PetscObjectGetComm((PetscObject)da,&comm);CHKERRQ(ierr); ierr = DMDAGetInfo(da,&dim,&M,&N,&P,0,0,0,0,0,&bx,&by,&bz,0);CHKERRQ(ierr); ierr = DMDAGetCorners(da,&istart,&jstart,&kstart,&isize,&jsize,&ksize);CHKERRQ(ierr); ierr = DMDAGetCoordinateDA(da, &cda);CHKERRQ(ierr); ierr = DMCreateGlobalVector(cda, &xcoor);CHKERRQ(ierr); if (dim == 1) { if (bx == DMDA_BOUNDARY_PERIODIC) hx = (xmax-xmin)/M; else hx = (xmax-xmin)/(M-1); ierr = VecGetArray(xcoor,&coors);CHKERRQ(ierr); for (i=0; icomm,PETSC_ERR_ARG_INCOMP,"ymax must be larger than ymin %G %G",ymin,ymax); if (bx == DMDA_BOUNDARY_PERIODIC) hx = (xmax-xmin)/(M); else hx = (xmax-xmin)/(M-1); if (by == DMDA_BOUNDARY_PERIODIC) hy = (ymax-ymin)/(N); else hy = (ymax-ymin)/(N-1); ierr = VecGetArray(xcoor,&coors);CHKERRQ(ierr); cnt = 0; for (j=0; jcomm,PETSC_ERR_ARG_INCOMP,"ymax must be larger than ymin %G %G",ymin,ymax); if (zmax <= zmin) SETERRQ2(((PetscObject)da)->comm,PETSC_ERR_ARG_INCOMP,"zmax must be larger than zmin %G %G",zmin,zmax); if (bx == DMDA_BOUNDARY_PERIODIC) hx = (xmax-xmin)/(M); else hx = (xmax-xmin)/(M-1); if (by == DMDA_BOUNDARY_PERIODIC) hy = (ymax-ymin)/(N); else hy = (ymax-ymin)/(N-1); if (bz == DMDA_BOUNDARY_PERIODIC) hz_ = (zmax-zmin)/(P); else hz_ = (zmax-zmin)/(P-1); ierr = VecGetArray(xcoor,&coors);CHKERRQ(ierr); cnt = 0; for (k=0; kcomm,PETSC_ERR_SUP,"Cannot create uniform coordinates for this dimension %D\n",dim); } ierr = DMDASetCoordinates(da,xcoor);CHKERRQ(ierr); ierr = PetscLogObjectParent(da,xcoor);CHKERRQ(ierr); ierr = VecDestroy(&xcoor);CHKERRQ(ierr); PetscFunctionReturn(0); } #undef __FUNCT__ #define __FUNCT__ "VecView_MPI_Draw_DA1d" PetscErrorCode VecView_MPI_Draw_DA1d(Vec xin,PetscViewer v) { DM da; PetscErrorCode ierr; PetscMPIInt rank,size,tag1,tag2; PetscInt i,n,N,step,istart,isize,j; MPI_Status status; PetscReal coors[4],ymin,ymax,min,max,xmin,xmax,tmp,xgtmp; const PetscScalar *array,*xg; PetscDraw draw; PetscBool isnull,showpoints = PETSC_FALSE; MPI_Comm comm; PetscDrawAxis axis; Vec xcoor; DMDABoundaryType bx; PetscFunctionBegin; ierr = PetscViewerDrawGetDraw(v,0,&draw);CHKERRQ(ierr); ierr = PetscDrawIsNull(draw,&isnull);CHKERRQ(ierr); if (isnull) PetscFunctionReturn(0); ierr = PetscObjectQuery((PetscObject)xin,"DM",(PetscObject*)&da);CHKERRQ(ierr); if (!da) SETERRQ(((PetscObject)xin)->comm,PETSC_ERR_ARG_WRONG,"Vector not generated from a DMDA"); ierr = PetscOptionsGetBool(PETSC_NULL,"-draw_vec_mark_points",&showpoints,PETSC_NULL);CHKERRQ(ierr); ierr = DMDAGetInfo(da,0,&N,0,0,0,0,0,&step,0,&bx,0,0,0);CHKERRQ(ierr); ierr = DMDAGetCorners(da,&istart,0,0,&isize,0,0);CHKERRQ(ierr); ierr = VecGetArrayRead(xin,&array);CHKERRQ(ierr); ierr = VecGetLocalSize(xin,&n);CHKERRQ(ierr); n = n/step; /* get coordinates of nodes */ ierr = DMDAGetCoordinates(da,&xcoor);CHKERRQ(ierr); if (!xcoor) { ierr = DMDASetUniformCoordinates(da,0.0,1.0,0.0,0.0,0.0,0.0);CHKERRQ(ierr); ierr = DMDAGetCoordinates(da,&xcoor);CHKERRQ(ierr); } ierr = VecGetArrayRead(xcoor,&xg);CHKERRQ(ierr); ierr = PetscObjectGetComm((PetscObject)xin,&comm);CHKERRQ(ierr); ierr = MPI_Comm_size(comm,&size);CHKERRQ(ierr); ierr = MPI_Comm_rank(comm,&rank);CHKERRQ(ierr); /* Determine the min and max x coordinate in plot */ if (!rank) { xmin = PetscRealPart(xg[0]); } if (rank == size-1) { xmax = PetscRealPart(xg[n-1]); } ierr = MPI_Bcast(&xmin,1,MPIU_REAL,0,comm);CHKERRQ(ierr); ierr = MPI_Bcast(&xmax,1,MPIU_REAL,size-1,comm);CHKERRQ(ierr); for (j=0; j max) max = PetscRealPart(array[j+i*step]); #else if (array[j+i*step] < min) min = array[j+i*step]; if (array[j+i*step] > max) max = array[j+i*step]; #endif } if (min + 1.e-10 > max) { min -= 1.e-5; max += 1.e-5; } ierr = MPI_Reduce(&min,&ymin,1,MPIU_REAL,MPIU_MIN,0,comm);CHKERRQ(ierr); ierr = MPI_Reduce(&max,&ymax,1,MPIU_REAL,MPIU_MAX,0,comm);CHKERRQ(ierr); ierr = PetscDrawSynchronizedClear(draw);CHKERRQ(ierr); ierr = PetscViewerDrawGetDrawAxis(v,j,&axis);CHKERRQ(ierr); ierr = PetscLogObjectParent(draw,axis);CHKERRQ(ierr); if (!rank) { const char *title; ierr = PetscDrawAxisSetLimits(axis,xmin,xmax,ymin,ymax);CHKERRQ(ierr); ierr = PetscDrawAxisDraw(axis);CHKERRQ(ierr); ierr = PetscDrawGetCoordinates(draw,coors,coors+1,coors+2,coors+3);CHKERRQ(ierr); ierr = DMDAGetFieldName(da,j,&title);CHKERRQ(ierr); if (title) {ierr = PetscDrawSetTitle(draw,title);CHKERRQ(ierr);} } ierr = MPI_Bcast(coors,4,MPIU_REAL,0,comm);CHKERRQ(ierr); if (rank) { ierr = PetscDrawSetCoordinates(draw,coors[0],coors[1],coors[2],coors[3]);CHKERRQ(ierr); } /* draw local part of vector */ PetscObjectGetNewTag((PetscObject)xin,&tag1);CHKERRQ(ierr); PetscObjectGetNewTag((PetscObject)xin,&tag2);CHKERRQ(ierr); if (rank < size-1) { /*send value to right */ ierr = MPI_Send((void*)&array[j+(n-1)*step],1,MPIU_REAL,rank+1,tag1,comm);CHKERRQ(ierr); ierr = MPI_Send((void*)&xg[n-1],1,MPIU_REAL,rank+1,tag1,comm);CHKERRQ(ierr); } if (!rank && bx == DMDA_BOUNDARY_PERIODIC && size > 1) { /* first processor sends first value to last */ ierr = MPI_Send((void*)&array[j],1,MPIU_REAL,size-1,tag2,comm);CHKERRQ(ierr); } for (i=1; i 1) { ierr = MPI_Recv(&tmp,1,MPIU_REAL,0,tag2,comm,&status);CHKERRQ(ierr); #if !defined(PETSC_USE_COMPLEX) ierr = PetscDrawLine(draw,xg[n-2],array[j+step*(n-1)],xg[n-1],tmp,PETSC_DRAW_RED);CHKERRQ(ierr); #else ierr = PetscDrawLine(draw,PetscRealPart(xg[n-2]),PetscRealPart(array[j+step*(n-1)]), PetscRealPart(xg[n-1]),tmp,PETSC_DRAW_RED);CHKERRQ(ierr); #endif if (showpoints) { ierr = PetscDrawPoint(draw,PetscRealPart(xg[n-2]),PetscRealPart(array[j+step*(n-1)]),PETSC_DRAW_BLACK);CHKERRQ(ierr); } } ierr = PetscDrawSynchronizedFlush(draw);CHKERRQ(ierr); ierr = PetscDrawPause(draw);CHKERRQ(ierr); } ierr = VecRestoreArrayRead(xcoor,&xg);CHKERRQ(ierr); ierr = VecRestoreArrayRead(xin,&array);CHKERRQ(ierr); PetscFunctionReturn(0); }