const char help[] = "Test DMPlexCoordinatesToReference().\n\n"; #include #include static PetscErrorCode testIdentity(DM dm, PetscBool dmIsSimplicial, PetscInt cell, PetscRandom randCtx, PetscInt numPoints, PetscReal tol) { PetscInt i, j, dimC, dimR; PetscReal *preimage, *mapped, *inverted; PetscFunctionBegin; PetscCall(DMGetDimension(dm,&dimR)); PetscCall(DMGetCoordinateDim(dm,&dimC)); PetscCall(DMGetWorkArray(dm,dimR * numPoints,MPIU_REAL,&preimage)); PetscCall(DMGetWorkArray(dm,dimC * numPoints,MPIU_REAL,&mapped)); PetscCall(DMGetWorkArray(dm,dimR * numPoints,MPIU_REAL,&inverted)); for (i = 0; i < dimR * numPoints; i++) { PetscCall(PetscRandomGetValueReal(randCtx, &preimage[i])); } if (dmIsSimplicial && dimR > 1) { for (i = 0; i < numPoints; i++) { for (j = 0; j < dimR; j++) { PetscReal x = preimage[i * dimR + j]; PetscReal y = preimage[i * dimR + ((j + 1) % dimR)]; preimage[i * dimR + ((j + 1) % dimR)] = -1. + (y + 1.) * 0.5 * (1. - x); } } } PetscCall(DMPlexReferenceToCoordinates(dm,cell,numPoints,preimage,mapped)); PetscCall(DMPlexCoordinatesToReference(dm,cell,numPoints,mapped,inverted)); for (i = 0; i < numPoints; i++) { PetscReal max = 0.; for (j = 0; j < dimR; j++) { max = PetscMax(max,PetscAbsReal(preimage[i * dimR + j] - inverted[i * dimR + j])); } if (max > tol) { PetscCall(PetscPrintf(PETSC_COMM_SELF,"Bad inversion for cell %" PetscInt_FMT " with error %g (tol %g): (",cell,(double)max,(double)tol)); for (j = 0; j < dimR; j++) { PetscCall(PetscPrintf(PETSC_COMM_SELF,"%+f",(double) preimage[i * dimR + j])); if (j < dimR - 1) { PetscCall(PetscPrintf(PETSC_COMM_SELF,",")); } } PetscCall(PetscPrintf(PETSC_COMM_SELF,") --> (")); for (j = 0; j < dimC; j++) { PetscCall(PetscPrintf(PETSC_COMM_SELF,"%+f",(double) mapped[i * dimC + j])); if (j < dimC - 1) { PetscCall(PetscPrintf(PETSC_COMM_SELF,",")); } } PetscCall(PetscPrintf(PETSC_COMM_SELF,") --> (")); for (j = 0; j < dimR; j++) { PetscCall(PetscPrintf(PETSC_COMM_SELF,"%+f",(double) inverted[i * dimR + j])); if (j < dimR - 1) { PetscCall(PetscPrintf(PETSC_COMM_SELF,",")); } } PetscCall(PetscPrintf(PETSC_COMM_SELF,")\n")); } else { char strBuf[BUFSIZ] = {'\0'}; size_t offset = 0, count; PetscCall(PetscSNPrintfCount(strBuf + offset,BUFSIZ-offset,"Good inversion for cell %" PetscInt_FMT ": (",&count,cell)); offset += count; for (j = 0; j < dimR; j++) { PetscCall(PetscSNPrintfCount(strBuf + offset,BUFSIZ-offset,"%+f",&count,(double) preimage[i * dimR + j])); offset += count; if (j < dimR - 1) { PetscCall(PetscSNPrintfCount(strBuf + offset,BUFSIZ-offset,",",&count)); offset += count; } } PetscCall(PetscSNPrintfCount(strBuf + offset,BUFSIZ-offset,") --> (",&count)); offset += count; for (j = 0; j < dimC; j++) { PetscCall(PetscSNPrintfCount(strBuf + offset,BUFSIZ-offset,"%+f",&count,(double) mapped[i * dimC + j])); offset += count; if (j < dimC - 1) { PetscCall(PetscSNPrintfCount(strBuf + offset,BUFSIZ-offset,",",&count)); offset += count; } } PetscCall(PetscSNPrintfCount(strBuf + offset,BUFSIZ-offset,") --> (",&count)); offset += count; for (j = 0; j < dimR; j++) { PetscCall(PetscSNPrintfCount(strBuf + offset,BUFSIZ-offset,"%+f",&count,(double) inverted[i * dimR + j])); offset += count; if (j < dimR - 1) { PetscCall(PetscSNPrintfCount(strBuf + offset,BUFSIZ-offset,",",&count)); offset += count; } } PetscCall(PetscSNPrintfCount(strBuf + offset,BUFSIZ-offset,")\n",&count)); PetscCall(PetscInfo(dm,"%s",strBuf)); } } PetscCall(DMRestoreWorkArray(dm,dimR * numPoints,MPIU_REAL,&inverted)); PetscCall(DMRestoreWorkArray(dm,dimC * numPoints,MPIU_REAL,&mapped)); PetscCall(DMRestoreWorkArray(dm,dimR * numPoints,MPIU_REAL,&preimage)); PetscFunctionReturn(0); } static PetscErrorCode identityEmbedding(PetscInt dim, PetscReal time, const PetscReal *x, PetscInt Nf, PetscScalar *u, void *ctx) { PetscInt i; for (i = 0; i < dim; i++) {u[i] = x[i];}; return 0; } int main(int argc, char **argv) { PetscRandom randCtx; PetscInt dim, dimC, isSimplex, isFE, numTests = 10; PetscReal perturb = 0.1, tol = 10. * PETSC_SMALL; PetscFunctionBeginUser; PetscCall(PetscInitialize(&argc,&argv,NULL,help)); PetscCall(PetscRandomCreate(PETSC_COMM_SELF,&randCtx)); PetscCall(PetscRandomSetInterval(randCtx,-1.,1.)); PetscCall(PetscRandomSetFromOptions(randCtx)); PetscOptionsBegin(PETSC_COMM_WORLD,NULL,"ex21",NULL); PetscCall(PetscOptionsReal("-vertex_perturbation","scale of random vertex distortion",NULL,perturb,&perturb,NULL)); PetscCall(PetscOptionsBoundedInt("-num_test_points","number of points to test",NULL,numTests,&numTests,NULL,0)); PetscOptionsEnd(); for (dim = 1; dim <= 3; dim++) { for (dimC = dim; dimC <= PetscMin(3,dim + 1); dimC++) { for (isSimplex = 0; isSimplex < 2; isSimplex++) { for (isFE = 0; isFE < 2; isFE++) { DM dm; Vec coords; PetscScalar *coordArray; PetscReal noise; PetscInt i, n, order = 1; PetscCall(DMPlexCreateReferenceCell(PETSC_COMM_SELF, DMPolytopeTypeSimpleShape(dim, isSimplex ? PETSC_TRUE : PETSC_FALSE), &dm)); if (isFE) { DM dmCoord; PetscSpace sp; PetscFE fe; Vec localCoords; PetscErrorCode (*funcs[1])(PetscInt, PetscReal, const PetscReal[], PetscInt, PetscScalar[], void *) = {identityEmbedding}; void *ctxs[1] = {NULL}; PetscCall(PetscFECreateDefault(PetscObjectComm((PetscObject) dm),dim,dim,isSimplex ? PETSC_TRUE : PETSC_FALSE,isSimplex ? NULL : "tensor_" ,PETSC_DEFAULT,&fe)); PetscCall(PetscFEGetBasisSpace(fe,&sp)); PetscCall(PetscSpaceGetDegree(sp,&order,NULL)); PetscCall(DMSetField(dm,0,NULL,(PetscObject)fe)); PetscCall(DMCreateDS(dm)); PetscCall(DMCreateLocalVector(dm,&localCoords)); PetscCall(DMProjectFunctionLocal(dm,0,funcs,ctxs,INSERT_VALUES,localCoords)); PetscCall(VecSetDM(localCoords,NULL)); /* This is necessary to prevent a reference loop */ PetscCall(DMClone(dm,&dmCoord)); PetscCall(DMSetField(dmCoord,0,NULL,(PetscObject)fe)); PetscCall(PetscFEDestroy(&fe)); PetscCall(DMCreateDS(dmCoord)); PetscCall(DMSetCoordinateDM(dm,dmCoord)); PetscCall(DMDestroy(&dmCoord)); PetscCall(DMSetCoordinatesLocal(dm,localCoords)); PetscCall(VecDestroy(&localCoords)); } PetscCall(PetscInfo(dm,"Testing %s%" PetscInt_FMT " %" PetscInt_FMT "D mesh embedded in %" PetscInt_FMT "D\n",isSimplex ? "P" : "Q" , order, dim, dimC)); PetscCall(DMGetCoordinatesLocal(dm,&coords)); PetscCall(VecGetLocalSize(coords,&n)); if (dimC > dim) { /* reembed in higher dimension */ PetscSection sec, newSec; PetscInt pStart, pEnd, p, i, newN; Vec newVec; DM coordDM; PetscScalar *newCoordArray; PetscCall(DMGetCoordinateSection(dm,&sec)); PetscCall(PetscSectionCreate(PetscObjectComm((PetscObject)sec),&newSec)); PetscCall(PetscSectionSetNumFields(newSec,1)); PetscCall(PetscSectionGetChart(sec,&pStart,&pEnd)); PetscCall(PetscSectionSetChart(newSec,pStart,pEnd)); for (p = pStart; p < pEnd; p++) { PetscInt nDof; PetscCall(PetscSectionGetDof(sec,p,&nDof)); PetscCheck(nDof % dim == 0,PETSC_COMM_SELF,PETSC_ERR_PLIB,"Coordinate section point %" PetscInt_FMT " has %" PetscInt_FMT " dofs != 0 mod %" PetscInt_FMT,p,nDof,dim); PetscCall(PetscSectionSetDof(newSec,p,(nDof/dim)*dimC)); PetscCall(PetscSectionSetFieldDof(newSec,p,0,(nDof/dim)*dimC)); } PetscCall(PetscSectionSetUp(newSec)); PetscCall(PetscSectionGetStorageSize(newSec,&newN)); PetscCall(VecCreateSeq(PETSC_COMM_SELF,newN,&newVec)); PetscCall(VecGetArray(newVec,&newCoordArray)); PetscCall(VecGetArray(coords,&coordArray)); for (i = 0; i < n / dim; i++) { PetscInt j; for (j = 0; j < dim; j++) { newCoordArray[i * dimC + j] = coordArray[i * dim + j]; } for (; j < dimC; j++) { newCoordArray[i * dimC + j] = 0.; } } PetscCall(VecRestoreArray(coords,&coordArray)); PetscCall(VecRestoreArray(newVec,&newCoordArray)); PetscCall(DMSetCoordinateDim(dm,dimC)); PetscCall(DMSetCoordinateSection(dm,dimC,newSec)); PetscCall(DMSetCoordinatesLocal(dm,newVec)); PetscCall(VecDestroy(&newVec)); PetscCall(PetscSectionDestroy(&newSec)); PetscCall(DMGetCoordinatesLocal(dm,&coords)); PetscCall(DMGetCoordinateDM(dm,&coordDM)); if (isFE) { PetscFE fe; PetscCall(PetscFECreateDefault(PetscObjectComm((PetscObject) dm),dim,dimC,isSimplex ? PETSC_TRUE : PETSC_FALSE,isSimplex ? NULL : "tensor_",PETSC_DEFAULT,&fe)); PetscCall(DMSetField(coordDM,0,NULL,(PetscObject)fe)); PetscCall(PetscFEDestroy(&fe)); PetscCall(DMCreateDS(coordDM)); } PetscCall(DMSetCoordinateDim(coordDM,dimC)); PetscCall(VecGetLocalSize(coords,&n)); } PetscCall(VecGetArray(coords,&coordArray)); for (i = 0; i < n; i++) { PetscCall(PetscRandomGetValueReal(randCtx,&noise)); coordArray[i] += noise * perturb; } PetscCall(VecRestoreArray(coords,&coordArray)); PetscCall(DMSetCoordinatesLocal(dm, coords)); PetscCall(testIdentity(dm, isSimplex ? PETSC_TRUE : PETSC_FALSE, 0, randCtx, numTests, tol)); PetscCall(DMDestroy(&dm)); } } } } PetscCall(PetscRandomDestroy(&randCtx)); PetscCall(PetscFinalize()); return 0; } /*TEST test: suffix: 0 args: -petscspace_degree 2 -tensor_petscspace_degree 2 TEST*/