static char help[] = "Tests interpolation and output of hybrid meshes\n\n"; #include #include /* Much can be learned using -rd_dm_view -rd2_dm_view -rd_section_view -rd_vec_view -rd2_section_view */ static PetscErrorCode redistribute_vec(DM dist_dm, PetscSF sf, Vec *v) { DM dm, dist_v_dm; PetscSection section, dist_section; Vec dist_v; PetscMPIInt rank, size, p; PetscFunctionBegin; PetscCall(VecGetDM(*v, &dm)); PetscCall(DMGetLocalSection(dm, §ion)); PetscCall(DMViewFromOptions(dm, NULL, "-rd_dm_view")); PetscCall(DMViewFromOptions(dist_dm, NULL, "-rd2_dm_view")); PetscCall(DMClone(dm, &dist_v_dm)); PetscCall(VecCreate(PetscObjectComm((PetscObject)*v), &dist_v)); PetscCall(VecSetDM(dist_v, dist_v_dm)); PetscCall(PetscSectionCreate(PetscObjectComm((PetscObject)*v), &dist_section)); PetscCall(DMSetLocalSection(dist_v_dm, dist_section)); PetscCall(PetscObjectViewFromOptions((PetscObject)section, NULL, "-rd_section_view")); PetscCallMPI(MPI_Comm_rank(PetscObjectComm((PetscObject)dm), &rank)); PetscCallMPI(MPI_Comm_size(PetscObjectComm((PetscObject)dm), &size)); for (p = 0; p < size; ++p) { if (p == rank) PetscCall(PetscObjectViewFromOptions((PetscObject)*v, NULL, "-rd_vec_view")); PetscCall(PetscBarrier((PetscObject)dm)); PetscCall(PetscViewerFlush(PETSC_VIEWER_STDOUT_WORLD)); } PetscCall(DMPlexDistributeField(dm, sf, section, *v, dist_section, dist_v)); for (p = 0; p < size; ++p) { if (p == rank) { PetscCall(PetscObjectViewFromOptions((PetscObject)dist_section, NULL, "-rd2_section_view")); PetscCall(PetscObjectViewFromOptions((PetscObject)dist_v, NULL, "-rd2_vec_view")); } PetscCall(PetscBarrier((PetscObject)dm)); PetscCall(PetscViewerFlush(PETSC_VIEWER_STDOUT_WORLD)); } PetscCall(PetscSectionDestroy(&dist_section)); PetscCall(DMDestroy(&dist_v_dm)); PetscCall(VecDestroy(v)); *v = dist_v; PetscFunctionReturn(PETSC_SUCCESS); } static PetscErrorCode dm_view_geometry(DM dm, Vec cell_geom, Vec face_geom) { DM cell_dm, face_dm; PetscSection cell_section, face_section; const PetscScalar *cell_array, *face_array; const PetscInt *cells; PetscInt c, start_cell, end_cell; PetscInt f, start_face, end_face; PetscInt supportSize, offset; PetscMPIInt rank; PetscFunctionBegin; PetscCallMPI(MPI_Comm_rank(PETSC_COMM_WORLD, &rank)); /* cells */ PetscCall(DMPlexGetHeightStratum(dm, 0, &start_cell, &end_cell)); PetscCall(VecGetDM(cell_geom, &cell_dm)); PetscCall(DMGetLocalSection(cell_dm, &cell_section)); PetscCall(VecGetArrayRead(cell_geom, &cell_array)); for (c = start_cell; c < end_cell; ++c) { const PetscFVCellGeom *geom; PetscCall(PetscSectionGetOffset(cell_section, c, &offset)); geom = (PetscFVCellGeom *)&cell_array[offset]; PetscCall(PetscSynchronizedPrintf(PETSC_COMM_WORLD, "rank %d c %" PetscInt_FMT " centroid %g,%g,%g vol %g\n", rank, c, (double)geom->centroid[0], (double)geom->centroid[1], (double)geom->centroid[2], (double)geom->volume)); } PetscCall(PetscSynchronizedFlush(PETSC_COMM_WORLD, NULL)); PetscCall(VecRestoreArrayRead(cell_geom, &cell_array)); /* faces */ PetscCall(DMPlexGetHeightStratum(dm, 1, &start_face, &end_face)); PetscCall(VecGetDM(face_geom, &face_dm)); PetscCall(DMGetLocalSection(face_dm, &face_section)); PetscCall(VecGetArrayRead(face_geom, &face_array)); for (f = start_face; f < end_face; ++f) { PetscCall(DMPlexGetSupport(dm, f, &cells)); PetscCall(DMPlexGetSupportSize(dm, f, &supportSize)); if (supportSize > 1) { PetscCall(PetscSectionGetOffset(face_section, f, &offset)); PetscCall(PetscSynchronizedPrintf(PETSC_COMM_WORLD, "rank %d f %" PetscInt_FMT " cells %" PetscInt_FMT ",%" PetscInt_FMT " normal %g,%g,%g centroid %g,%g,%g\n", rank, f, cells[0], cells[1], (double)PetscRealPart(face_array[offset + 0]), (double)PetscRealPart(face_array[offset + 1]), (double)PetscRealPart(face_array[offset + 2]), (double)PetscRealPart(face_array[offset + 3]), (double)PetscRealPart(face_array[offset + 4]), (double)PetscRealPart(face_array[offset + 5]))); } } PetscCall(PetscSynchronizedFlush(PETSC_COMM_WORLD, NULL)); PetscCall(VecRestoreArrayRead(cell_geom, &cell_array)); PetscFunctionReturn(PETSC_SUCCESS); } int main(int argc, char **argv) { DM dm, redist_dm; PetscPartitioner part; PetscSF redist_sf; Vec cell_geom, face_geom; PetscInt overlap2 = 1; PetscFunctionBeginUser; PetscCall(PetscInitialize(&argc, &argv, NULL, help)); PetscCall(DMCreate(PETSC_COMM_WORLD, &dm)); PetscCall(DMSetType(dm, DMPLEX)); PetscCall(DMSetFromOptions(dm)); PetscCall(DMViewFromOptions(dm, NULL, "-dm_view")); PetscCall(DMPlexComputeGeometryFVM(dm, &cell_geom, &face_geom)); PetscCall(dm_view_geometry(dm, cell_geom, face_geom)); /* redistribute */ PetscCall(DMPlexGetPartitioner(dm, &part)); PetscCall(PetscPartitionerSetFromOptions(part)); PetscCall(PetscOptionsGetInt(NULL, NULL, "-overlap2", &overlap2, NULL)); PetscCall(DMPlexDistribute(dm, overlap2, &redist_sf, &redist_dm)); if (redist_dm) { PetscCall(redistribute_vec(redist_dm, redist_sf, &cell_geom)); PetscCall(redistribute_vec(redist_dm, redist_sf, &face_geom)); PetscCall(PetscObjectViewFromOptions((PetscObject)redist_sf, NULL, "-rd2_sf_view")); PetscCall(PetscPrintf(PETSC_COMM_WORLD, "redistributed:\n")); PetscCall(dm_view_geometry(redist_dm, cell_geom, face_geom)); } PetscCall(VecDestroy(&cell_geom)); PetscCall(VecDestroy(&face_geom)); PetscCall(PetscSFDestroy(&redist_sf)); PetscCall(DMDestroy(&redist_dm)); PetscCall(DMDestroy(&dm)); PetscCall(PetscFinalize()); return 0; } /*TEST test: suffix: 0 nsize: 3 args: -dm_plex_dim 3 -dm_plex_box_faces 8,1,1 -dm_plex_simplex 0 -dm_plex_adj_cone 1 -dm_plex_adj_closure 0 -petscpartitioner_type simple -dm_distribute_overlap 1 -overlap2 1 TEST*/