static char help[] = "Tests PetscPartitioner.\n\n"; #include int main(int argc, char **argv) { PetscErrorCode ierr; PetscPartitioner p; PetscSection partSection, vertexSection = NULL, targetSection = NULL; IS partition,is; PetscMPIInt size,rank; PetscInt nparts,i; PetscInt nv = 4; PetscInt vv[5] = {0,2,4,6,8}; PetscInt vadj[8] = {3,1,0,2,1,3,2,0}; PetscBool sequential; PetscBool vwgts = PETSC_FALSE; PetscBool pwgts = PETSC_FALSE; ierr = PetscInitialize(&argc, &argv, NULL, help);if (ierr) return ierr; ierr = MPI_Comm_size(PETSC_COMM_WORLD,&size);CHKERRMPI(ierr); ierr = MPI_Comm_rank(PETSC_COMM_WORLD,&rank);CHKERRMPI(ierr); nparts = size; ierr = PetscOptionsGetInt(NULL,NULL,"-nparts",&nparts,NULL);CHKERRQ(ierr); ierr = PetscOptionsGetBool(NULL,NULL,"-vwgts",&vwgts,NULL);CHKERRQ(ierr); ierr = PetscOptionsGetBool(NULL,NULL,"-pwgts",&pwgts,NULL);CHKERRQ(ierr); /* create PetscPartitioner */ ierr = PetscPartitionerCreate(PETSC_COMM_WORLD,&p);CHKERRQ(ierr); ierr = PetscPartitionerSetType(p,PETSCPARTITIONERSIMPLE);CHKERRQ(ierr); ierr = PetscPartitionerSetFromOptions(p);CHKERRQ(ierr); /* create partition section */ ierr = PetscSectionCreate(PETSC_COMM_WORLD,&partSection);CHKERRQ(ierr); if (vwgts) { /* create vertex weights section */ ierr = PetscSectionCreate(PETSC_COMM_WORLD,&vertexSection);CHKERRQ(ierr); ierr = PetscSectionSetChart(vertexSection,0,nv);CHKERRQ(ierr); for (i = 0; i< nv; i++) {ierr = PetscSectionSetDof(vertexSection,i,1);CHKERRQ(ierr);} ierr = PetscSectionSetUp(vertexSection);CHKERRQ(ierr); } if (pwgts) { /* create partition weights section */ ierr = PetscSectionCreate(PETSC_COMM_WORLD,&targetSection);CHKERRQ(ierr); ierr = PetscSectionSetChart(targetSection,0,nparts);CHKERRQ(ierr); for (i = 0; i< nparts; i++) {ierr = PetscSectionSetDof(targetSection,i,1);CHKERRQ(ierr);} ierr = PetscSectionSetUp(targetSection);CHKERRQ(ierr); } #if defined(PETSC_USE_LOG) { /* Test logging */ PetscLogEvent event; ierr = PetscLogEventRegister("MyPartitionerEvent",PETSCPARTITIONER_CLASSID,&event);CHKERRQ(ierr); { /* PetscLogEventExcludeClass is broken, new events are not deactivated */ char logList[256]; PetscBool opt,pkg; ierr = PetscOptionsGetString(NULL,NULL,"-log_exclude",logList,sizeof(logList),&opt);CHKERRQ(ierr); if (opt) { ierr = PetscStrInList("partitioner",logList,',',&pkg);CHKERRQ(ierr); if (pkg) {ierr = PetscLogEventExcludeClass(PETSCPARTITIONER_CLASSID);CHKERRQ(ierr);} } } ierr = PetscLogEventBegin(event,p,NULL,NULL,NULL);CHKERRQ(ierr); ierr = PetscLogEventEnd(event,p,NULL,NULL,NULL);CHKERRQ(ierr); } #endif /* test setup and reset */ ierr = PetscPartitionerSetUp(p);CHKERRQ(ierr); ierr = PetscPartitionerReset(p);CHKERRQ(ierr); /* test partitioning an empty graph */ ierr = PetscPartitionerPartition(p,nparts,0,NULL,NULL,vertexSection,targetSection,partSection,&partition);CHKERRQ(ierr); ierr = PetscObjectSetName((PetscObject)partSection,"NULL SECTION");CHKERRQ(ierr); ierr = PetscSectionView(partSection,NULL);CHKERRQ(ierr); ierr = ISOnComm(partition,PETSC_COMM_WORLD,PETSC_USE_POINTER,&is);CHKERRQ(ierr); ierr = PetscObjectSetName((PetscObject)is,"NULL PARTITION");CHKERRQ(ierr); ierr = ISView(is,NULL);CHKERRQ(ierr); ierr = ISDestroy(&is);CHKERRQ(ierr); ierr = ISDestroy(&partition);CHKERRQ(ierr); /* test view from options */ ierr = PetscPartitionerViewFromOptions(p,NULL,"-part_view");CHKERRQ(ierr); /* test partitioning a graph on one process only (not main) */ if (rank == size - 1) { ierr = PetscPartitionerPartition(p,nparts,nv,vv,vadj,vertexSection,targetSection,partSection,&partition);CHKERRQ(ierr); } else { ierr = PetscPartitionerPartition(p,nparts,0,NULL,NULL,vertexSection,targetSection,partSection,&partition);CHKERRQ(ierr); } ierr = PetscObjectSetName((PetscObject)partSection,"SEQ SECTION");CHKERRQ(ierr); ierr = PetscSectionView(partSection,NULL);CHKERRQ(ierr); ierr = ISOnComm(partition,PETSC_COMM_WORLD,PETSC_USE_POINTER,&is);CHKERRQ(ierr); ierr = PetscObjectSetName((PetscObject)is,"SEQ PARTITION");CHKERRQ(ierr); ierr = ISView(is,NULL);CHKERRQ(ierr); ierr = ISDestroy(&is);CHKERRQ(ierr); ierr = ISDestroy(&partition);CHKERRQ(ierr); ierr = PetscObjectTypeCompareAny((PetscObject)p,&sequential,PETSCPARTITIONERCHACO,NULL);CHKERRQ(ierr); if (sequential) goto finally; /* test partitioning a graph on a subset of the processess only */ if (rank%2) { ierr = PetscPartitionerPartition(p,nparts,0,NULL,NULL,NULL,targetSection,partSection,&partition);CHKERRQ(ierr); } else { PetscInt i,totv = nv*((size+1)/2),*pvadj; ierr = PetscMalloc1(2*nv,&pvadj);CHKERRQ(ierr); for (i = 0; i < nv; i++) { pvadj[2*i] = (nv*(rank/2) + totv + i - 1)%totv; pvadj[2*i+1] = (nv*(rank/2) + totv + i + 1)%totv; } ierr = PetscPartitionerPartition(p,nparts,nv,vv,pvadj,NULL,targetSection,partSection,&partition);CHKERRQ(ierr); ierr = PetscFree(pvadj);CHKERRQ(ierr); } ierr = PetscObjectSetName((PetscObject)partSection,"PARVOID SECTION");CHKERRQ(ierr); ierr = PetscSectionView(partSection,NULL);CHKERRQ(ierr); ierr = ISOnComm(partition,PETSC_COMM_WORLD,PETSC_USE_POINTER,&is);CHKERRQ(ierr); ierr = PetscObjectSetName((PetscObject)is,"PARVOID PARTITION");CHKERRQ(ierr); ierr = ISView(is,NULL);CHKERRQ(ierr); ierr = ISDestroy(&is);CHKERRQ(ierr); ierr = ISDestroy(&partition);CHKERRQ(ierr); finally: ierr = PetscSectionDestroy(&partSection);CHKERRQ(ierr); ierr = PetscSectionDestroy(&vertexSection);CHKERRQ(ierr); ierr = PetscSectionDestroy(&targetSection);CHKERRQ(ierr); ierr = PetscPartitionerDestroy(&p);CHKERRQ(ierr); ierr = PetscFinalize(); return ierr; } /*TEST test: suffix: default testset: requires: defined(PETSC_USE_LOG) args: -petscpartitioner_type simple -log_summary filter: grep MyPartitionerEvent | cut -d " " -f 1 test: suffix: log_include test: suffix: log_exclude args: -log_exclude partitioner test: suffix: simple nsize: {{1 2 3}separate output} args: -nparts {{1 2 3}separate output} -pwgts {{false true}separate output} -petscpartitioner_type simple -petscpartitioner_view test: suffix: shell nsize: {{1 2 3}separate output} args: -nparts {{1 2 3}separate output} -petscpartitioner_type shell -petscpartitioner_shell_random -petscpartitioner_view test: suffix: gather nsize: {{1 2 3}separate output} args: -nparts {{1 2 3}separate output} -petscpartitioner_type gather -petscpartitioner_view -petscpartitioner_view_graph test: requires: parmetis suffix: parmetis nsize: {{1 2 3}separate output} args: -nparts {{1 2 3}separate output} -pwgts {{false true}} -vwgts {{false true}} args: -petscpartitioner_type parmetis -petscpartitioner_view -petscpartitioner_view_graph test: requires: parmetis suffix: parmetis_type nsize: {{1 2}} args: -petscpartitioner_type parmetis -part_view args: -petscpartitioner_parmetis_type {{kway rb}separate output} filter: grep "ParMetis type" test: requires: ptscotch suffix: ptscotch nsize: {{1 2 3}separate output} args: -nparts {{1 2 3}separate output} -pwgts {{false true}separate output} -vwgts {{false true}} args: -petscpartitioner_type ptscotch -petscpartitioner_view -petscpartitioner_view_graph test: requires: ptscotch suffix: ptscotch_strategy nsize: {{1 2}} args: -petscpartitioner_type ptscotch -part_view args: -petscpartitioner_ptscotch_strategy {{DEFAULT QUALITY SPEED BALANCE SAFETY SCALABILITY RECURSIVE REMAP}separate output} filter: grep "partitioning strategy" test: requires: chaco suffix: chaco nsize: {{1 2 3}separate output} args: -nparts {{1}separate output} -petscpartitioner_type chaco -petscpartitioner_view -petscpartitioner_view_graph test: TODO: non reproducible (uses C stdlib rand()) requires: chaco suffix: chaco nsize: {{1 2 3}separate output} args: -nparts {{2 3}separate output} -petscpartitioner_type chaco -petscpartitioner_view -petscpartitioner_view_graph TEST*/