#include #include /* MatGetOrdering_RCM - Find the Reverse Cuthill-McKee ordering of a given matrix. */ PETSC_INTERN PetscErrorCode MatGetOrdering_RCM(Mat mat, MatOrderingType type, IS *row, IS *col) { PetscInt i, *mask, *xls, nrow, *perm; const PetscInt *ia, *ja; PetscBool done; PetscFunctionBegin; PetscCall(MatGetRowIJ(mat, 1, PETSC_TRUE, PETSC_TRUE, &nrow, &ia, &ja, &done)); PetscCheck(done, PetscObjectComm((PetscObject)mat), PETSC_ERR_SUP, "Cannot get rows for matrix"); PetscCall(PetscMalloc3(nrow, &mask, nrow, &perm, 2 * nrow, &xls)); PetscCall(SPARSEPACKgenrcm(&nrow, ia, ja, perm, mask, xls)); PetscCall(MatRestoreRowIJ(mat, 1, PETSC_TRUE, PETSC_TRUE, NULL, &ia, &ja, &done)); /* shift because Sparsepack indices start at one */ for (i = 0; i < nrow; i++) perm[i]--; PetscCall(ISCreateGeneral(PETSC_COMM_SELF, nrow, perm, PETSC_COPY_VALUES, row)); PetscCall(ISCreateGeneral(PETSC_COMM_SELF, nrow, perm, PETSC_COPY_VALUES, col)); PetscCall(PetscFree3(mask, perm, xls)); PetscFunctionReturn(PETSC_SUCCESS); }