#if !defined(__MPIAIJ_H) #define __MPIAIJ_H #include <../src/mat/impls/aij/seq/aij.h> #include typedef struct { /* used by MatCreateMPIAIJSumSeqAIJ for reusing the merged matrix */ PetscLayout rowmap; PetscInt **buf_ri,**buf_rj; PetscMPIInt *len_s,*len_r,*id_r; /* array of length of comm->size, store send/recv matrix values */ PetscMPIInt nsend,nrecv; PetscInt *bi,*bj; /* i and j array of the local portion of mpi C (matrix product) - rename to ci, cj! */ PetscInt *owners_co,*coi,*coj; /* i and j array of (p->B)^T*A*P - used in the communication */ PetscErrorCode (*destroy)(Mat); PetscErrorCode (*duplicate)(Mat,MatDuplicateOption,Mat*); } Mat_Merge_SeqsToMPI; typedef struct { /* used by MatPtAP_MPIAIJ_MPIAIJ() and MatMatMult_MPIAIJ_MPIAIJ() */ PetscInt *startsj_s,*startsj_r; /* used by MatGetBrowsOfAoCols_MPIAIJ */ PetscScalar *bufa; /* used by MatGetBrowsOfAoCols_MPIAIJ */ Mat P_loc,P_oth; /* partial B_seq -- intend to replace B_seq */ PetscInt *api,*apj; /* symbolic i and j arrays of the local product A_loc*B_seq */ PetscInt rmax; /* max num of nnz in a local row of the matrix product */ MatReuse reuse; /* flag to skip MatGetBrowsOfAoCols_MPIAIJ() and MatMPIAIJGetLocalMat() in 1st call of MatPtAPNumeric_MPIAIJ_MPIAIJ() */ PetscScalar *apa; /* tmp array for store a row of A*P used in MatMatMult() */ Mat A_loc; /* used by MatTransposeMatMult(), contains api and apj */ Mat Pt; /* used by MatTransposeMatMult(), Pt = P^T */ PetscBool scalable; /* flag determines scalable or non-scalable implementation */ Mat_Merge_SeqsToMPI *merge; PetscErrorCode (*destroy)(Mat); PetscErrorCode (*duplicate)(Mat,MatDuplicateOption,Mat*); } Mat_PtAPMPI; typedef struct { Mat A,B; /* local submatrices: A (diag part), B (off-diag part) */ PetscMPIInt size; /* size of communicator */ PetscMPIInt rank; /* rank of proc in communicator */ /* The following variables are used for matrix assembly */ PetscBool donotstash; /* PETSC_TRUE if off processor entries dropped */ MPI_Request *send_waits; /* array of send requests */ MPI_Request *recv_waits; /* array of receive requests */ PetscInt nsends,nrecvs; /* numbers of sends and receives */ PetscScalar *svalues,*rvalues; /* sending and receiving data */ PetscInt rmax; /* maximum message length */ #if defined(PETSC_USE_CTABLE) PetscTable colmap; #else PetscInt *colmap; /* local col number of off-diag col */ #endif PetscInt *garray; /* global index of all off-processor columns */ /* The following variables are used for matrix-vector products */ Vec lvec; /* local vector */ Vec diag; VecScatter Mvctx; /* scatter context for vector */ PetscBool roworiented; /* if true, row-oriented input, default true */ /* The following variables are for MatGetRow() */ PetscInt *rowindices; /* column indices for row */ PetscScalar *rowvalues; /* nonzero values in row */ PetscBool getrowactive; /* indicates MatGetRow(), not restored */ /* Used by MatDistribute_MPIAIJ() to allow reuse of previous matrix allocation and nonzero pattern */ PetscInt *ld; /* number of entries per row left of diagona block */ /* Used by MatMatMult() and MatPtAP() */ Mat_PtAPMPI *ptap; /* used by MatMatMatMult() */ Mat_MatMatMatMult *matmatmatmult; /* Used by MPICUSP and MPICUSPARSE classes */ void * spptr; } Mat_MPIAIJ; PETSC_EXTERN PetscErrorCode MatCreate_MPIAIJ(Mat); PETSC_INTERN PetscErrorCode MatSetColoring_MPIAIJ(Mat,ISColoring); PETSC_INTERN PetscErrorCode MatSetValuesAdifor_MPIAIJ(Mat,PetscInt,void*); PETSC_INTERN PetscErrorCode MatSetUpMultiply_MPIAIJ(Mat); PETSC_INTERN PetscErrorCode MatDisAssemble_MPIAIJ(Mat); PETSC_INTERN PetscErrorCode MatDuplicate_MPIAIJ(Mat,MatDuplicateOption,Mat*); PETSC_INTERN PetscErrorCode MatIncreaseOverlap_MPIAIJ(Mat,PetscInt,IS [],PetscInt); PETSC_INTERN PetscErrorCode MatFDColoringCreate_MPIXAIJ(Mat,ISColoring,MatFDColoring); PETSC_INTERN PetscErrorCode MatFDColoringSetUp_MPIXAIJ(Mat,ISColoring,MatFDColoring); PETSC_INTERN PetscErrorCode MatGetSubMatrices_MPIAIJ (Mat,PetscInt,const IS[],const IS[],MatReuse,Mat *[]); PETSC_INTERN PetscErrorCode MatGetSubMatricesMPI_MPIAIJ (Mat,PetscInt,const IS[],const IS[],MatReuse,Mat *[]); PETSC_INTERN PetscErrorCode MatGetSubMatrix_MPIAIJ_All(Mat,MatGetSubMatrixOption,MatReuse,Mat *[]); PETSC_INTERN PetscErrorCode MatGetSubMatrix_MPIAIJ(Mat,IS,IS,MatReuse,Mat*); PETSC_INTERN PetscErrorCode MatGetSubMatrix_MPIAIJ_Private (Mat,IS,IS,PetscInt,MatReuse,Mat*); PETSC_INTERN PetscErrorCode MatGetMultiProcBlock_MPIAIJ(Mat,MPI_Comm,MatReuse,Mat*); PETSC_INTERN PetscErrorCode MatLoad_MPIAIJ(Mat,PetscViewer); PETSC_INTERN PetscErrorCode MatCreateColmap_MPIAIJ_Private(Mat); PETSC_INTERN PetscErrorCode MatMatMult_MPIDense_MPIAIJ(Mat,Mat,MatReuse,PetscReal,Mat*); PETSC_INTERN PetscErrorCode MatMatMult_MPIAIJ_MPIAIJ(Mat,Mat,MatReuse,PetscReal,Mat*); PETSC_INTERN PetscErrorCode MatMatMultSymbolic_MPIAIJ_MPIAIJ_nonscalable(Mat,Mat,PetscReal,Mat*); PETSC_INTERN PetscErrorCode MatMatMultSymbolic_MPIAIJ_MPIAIJ(Mat,Mat,PetscReal,Mat*); PETSC_INTERN PetscErrorCode MatMatMultNumeric_MPIAIJ_MPIAIJ(Mat,Mat,Mat); PETSC_INTERN PetscErrorCode MatMatMultNumeric_MPIAIJ_MPIAIJ_nonscalable(Mat,Mat,Mat); PETSC_INTERN PetscErrorCode MatMatMatMult_MPIAIJ_MPIAIJ_MPIAIJ(Mat,Mat,Mat,MatReuse,PetscReal,Mat*); PETSC_INTERN PetscErrorCode MatMatMatMultSymbolic_MPIAIJ_MPIAIJ_MPIAIJ(Mat,Mat,Mat,PetscReal,Mat*); PETSC_INTERN PetscErrorCode MatMatMatMultNumeric_MPIAIJ_MPIAIJ_MPIAIJ(Mat,Mat,Mat,Mat); PETSC_INTERN PetscErrorCode MatPtAP_MPIAIJ_MPIAIJ(Mat,Mat,MatReuse,PetscReal,Mat*); PETSC_INTERN PetscErrorCode MatPtAPSymbolic_MPIAIJ_MPIAIJ(Mat,Mat,PetscReal,Mat*); PETSC_INTERN PetscErrorCode MatPtAPNumeric_MPIAIJ_MPIAIJ(Mat,Mat,Mat); PETSC_INTERN PetscErrorCode MatPtAPSymbolic_MPIAIJ_MPIAIJ(Mat,Mat,PetscReal,Mat*); PETSC_INTERN PetscErrorCode MatPtAPNumeric_MPIAIJ_MPIAIJ(Mat,Mat,Mat); PETSC_INTERN PetscErrorCode MatDestroy_MPIAIJ_PtAP(Mat); PETSC_INTERN PetscErrorCode MatDestroy_MPIAIJ(Mat); PETSC_INTERN PetscErrorCode MatGetBrowsOfAoCols_MPIAIJ(Mat,Mat,MatReuse,PetscInt**,PetscInt**,MatScalar**,Mat*); PETSC_INTERN PetscErrorCode MatSetValues_MPIAIJ(Mat,PetscInt,const PetscInt[],PetscInt,const PetscInt[],const PetscScalar [],InsertMode); PETSC_INTERN PetscErrorCode MatDestroy_MPIAIJ_MatMatMult(Mat); PETSC_INTERN PetscErrorCode PetscContainerDestroy_Mat_MatMatMultMPI(void*); PETSC_INTERN PetscErrorCode MatSetOption_MPIAIJ(Mat,MatOption,PetscBool); PETSC_INTERN PetscErrorCode MatTransposeMatMult_MPIAIJ_MPIAIJ(Mat,Mat,MatReuse,PetscReal,Mat*); PETSC_INTERN PetscErrorCode MatTransposeMatMultSymbolic_MPIAIJ_MPIAIJ_nonscalable(Mat,Mat,PetscReal,Mat*); PETSC_INTERN PetscErrorCode MatTransposeMatMultSymbolic_MPIAIJ_MPIAIJ(Mat,Mat,PetscReal,Mat*); PETSC_INTERN PetscErrorCode MatTransposeMatMultNumeric_MPIAIJ_MPIAIJ(Mat,Mat,Mat); PETSC_INTERN PetscErrorCode MatTransposeMatMultNumeric_MPIAIJ_MPIAIJ_nonscalable(Mat,Mat,Mat); PETSC_INTERN PetscErrorCode MatTransposeMatMultNumeric_MPIAIJ_MPIAIJ_matmatmult(Mat,Mat,Mat); PETSC_INTERN PetscErrorCode MatTransposeMatMult_MPIAIJ_MPIDense(Mat,Mat,MatReuse,PetscReal,Mat*); PETSC_INTERN PetscErrorCode MatTransposeMatMultSymbolic_MPIAIJ_MPIDense(Mat,Mat,PetscReal,Mat*); PETSC_INTERN PetscErrorCode MatTransposeMatMultNumeric_MPIAIJ_MPIDense(Mat,Mat,Mat); PETSC_INTERN PetscErrorCode MatGetSeqNonzeroStructure_MPIAIJ(Mat,Mat*); extern PetscErrorCode MatMPIAIJSetPreallocation_MPIAIJ(Mat,PetscInt,const PetscInt[],PetscInt,const PetscInt[]); #if !defined(PETSC_USE_COMPLEX) && !defined(PETSC_USE_REAL_SINGLE) && !defined(PETSC_USE_REAL___FLOAT128) PETSC_INTERN PetscErrorCode MatLUFactorSymbolic_MPIAIJ_TFS(Mat,IS,IS,const MatFactorInfo*,Mat*); #endif PETSC_INTERN PetscErrorCode MatSolve_MPIAIJ(Mat,Vec,Vec); PETSC_INTERN PetscErrorCode MatILUFactor_MPIAIJ(Mat,IS,IS,const MatFactorInfo*); PETSC_INTERN PetscErrorCode MatAXPYGetPreallocation_MPIX_private(PetscInt,const PetscInt*,const PetscInt*,const PetscInt*,const PetscInt*,const PetscInt*,const PetscInt*,PetscInt*); extern PetscErrorCode MatGetDiagonalBlock_MPIAIJ(Mat,Mat*); extern PetscErrorCode MatDiagonalScaleLocal_MPIAIJ(Mat,Vec); PETSC_INTERN PetscErrorCode MatGetSeqMats_MPIAIJ(Mat,Mat*,Mat*); PETSC_INTERN PetscErrorCode MatSetSeqMats_MPIAIJ(Mat,IS,IS,IS,MatStructure,Mat,Mat); #endif