#define PETSCMAT_DLL /* Defines matrix-matrix product routines for pairs of MPIAIJ matrices C = A * B */ #include "src/mat/impls/aij/seq/aij.h" /*I "petscmat.h" I*/ #include "src/mat/utils/freespace.h" #include "src/mat/impls/aij/mpi/mpiaij.h" #include "petscbt.h" #undef __FUNCT__ #define __FUNCT__ "MatMatMult_MPIAIJ_MPIAIJ" PetscErrorCode MatMatMult_MPIAIJ_MPIAIJ(Mat A,Mat B,MatReuse scall,PetscReal fill, Mat *C) { PetscErrorCode ierr; PetscFunctionBegin; if (scall == MAT_INITIAL_MATRIX){ ierr = MatMatMultSymbolic_MPIAIJ_MPIAIJ(A,B,fill,C);CHKERRQ(ierr);/* numeric product is computed as well */ } else if (scall == MAT_REUSE_MATRIX){ ierr = MatMatMultNumeric_MPIAIJ_MPIAIJ(A,B,*C);CHKERRQ(ierr); } else { SETERRQ1(PETSC_ERR_ARG_WRONG,"Invalid MatReuse %d",(int)scall); } PetscFunctionReturn(0); } #undef __FUNCT__ #define __FUNCT__ "PetscObjectContainerDestroy_Mat_MatMatMultMPI" PetscErrorCode PetscObjectContainerDestroy_Mat_MatMatMultMPI(void *ptr) { PetscErrorCode ierr; Mat_MatMatMultMPI *mult=(Mat_MatMatMultMPI*)ptr; PetscFunctionBegin; if (mult->startsj){ierr = PetscFree(mult->startsj);CHKERRQ(ierr);} if (mult->bufa){ierr = PetscFree(mult->bufa);CHKERRQ(ierr);} if (mult->isrowa){ierr = ISDestroy(mult->isrowa);CHKERRQ(ierr);} if (mult->isrowb){ierr = ISDestroy(mult->isrowb);CHKERRQ(ierr);} if (mult->iscolb){ierr = ISDestroy(mult->iscolb);CHKERRQ(ierr);} if (mult->C_seq){ierr = MatDestroy(mult->C_seq);CHKERRQ(ierr);} if (mult->A_loc){ierr = MatDestroy(mult->A_loc);CHKERRQ(ierr); } if (mult->B_seq){ierr = MatDestroy(mult->B_seq);CHKERRQ(ierr);} if (mult->B_loc){ierr = MatDestroy(mult->B_loc);CHKERRQ(ierr);} if (mult->B_oth){ierr = MatDestroy(mult->B_oth);CHKERRQ(ierr);} if (mult->abi){ierr = PetscFree(mult->abi);CHKERRQ(ierr);} if (mult->abj){ierr = PetscFree(mult->abj);CHKERRQ(ierr);} ierr = PetscFree(mult);CHKERRQ(ierr); PetscFunctionReturn(0); } EXTERN PetscErrorCode MatDestroy_AIJ(Mat); #undef __FUNCT__ #define __FUNCT__ "MatDestroy_MPIAIJ_MatMatMult" PetscErrorCode MatDestroy_MPIAIJ_MatMatMult(Mat A) { PetscErrorCode ierr; PetscObjectContainer container; Mat_MatMatMultMPI *mult=PETSC_NULL; PetscFunctionBegin; ierr = PetscObjectQuery((PetscObject)A,"Mat_MatMatMultMPI",(PetscObject *)&container);CHKERRQ(ierr); if (container) { ierr = PetscObjectContainerGetPointer(container,(void **)&mult);CHKERRQ(ierr); } else { SETERRQ(PETSC_ERR_PLIB,"Container does not exit"); } A->ops->destroy = mult->MatDestroy; ierr = PetscObjectCompose((PetscObject)A,"Mat_MatMatMultMPI",0);CHKERRQ(ierr); ierr = MatDestroy(A);CHKERRQ(ierr); ierr = PetscObjectContainerDestroy(container);CHKERRQ(ierr); PetscFunctionReturn(0); } #undef __FUNCT__ #define __FUNCT__ "MatMatMultSymbolic_MPIAIJ_MPIAIJ" PetscErrorCode MatMatMultSymbolic_MPIAIJ_MPIAIJ(Mat A,Mat B,PetscReal fill,Mat *C) { Mat_MPIAIJ *a=(Mat_MPIAIJ*)A->data,*b=(Mat_MPIAIJ*)B->data; PetscErrorCode ierr; PetscInt start,end; Mat_MatMatMultMPI *mult; PetscObjectContainer container; PetscFunctionBegin; if (a->cstart != b->rstart || a->cend != b->rend){ SETERRQ4(PETSC_ERR_ARG_SIZ,"Matrix local dimensions are incompatible, (%D, %D) != (%D,%D)",a->cstart,a->cend,b->rstart,b->rend); } ierr = PetscNew(Mat_MatMatMultMPI,&mult);CHKERRQ(ierr); /* create a seq matrix B_seq = submatrix of B by taking rows of B that equal to nonzero col of A */ ierr = MatGetBrowsOfAcols(A,B,MAT_INITIAL_MATRIX,&mult->isrowb,&mult->iscolb,&mult->brstart,&mult->B_seq);CHKERRQ(ierr); /* create a seq matrix A_seq = submatrix of A by taking all local rows of A */ start = a->rstart; end = a->rend; ierr = ISCreateStride(PETSC_COMM_SELF,end-start,start,1,&mult->isrowa);CHKERRQ(ierr); ierr = MatGetLocalMatCondensed(A,MAT_INITIAL_MATRIX,&mult->isrowa,&mult->isrowb,&mult->A_loc);CHKERRQ(ierr); /* compute C_seq = A_seq * B_seq */ ierr = MatMatMult_SeqAIJ_SeqAIJ(mult->A_loc,mult->B_seq,MAT_INITIAL_MATRIX,fill,&mult->C_seq);CHKERRQ(ierr); /* create mpi matrix C by concatinating C_seq */ ierr = PetscObjectReference((PetscObject)mult->C_seq);CHKERRQ(ierr); /* prevent C_seq being destroyed by MatMerge() */ ierr = MatMerge(A->comm,mult->C_seq,B->n,MAT_INITIAL_MATRIX,C);CHKERRQ(ierr); /* attach the supporting struct to C for reuse of symbolic C */ ierr = PetscObjectContainerCreate(PETSC_COMM_SELF,&container);CHKERRQ(ierr); ierr = PetscObjectContainerSetPointer(container,mult);CHKERRQ(ierr); ierr = PetscObjectCompose((PetscObject)(*C),"Mat_MatMatMultMPI",(PetscObject)container);CHKERRQ(ierr); ierr = PetscObjectContainerSetUserDestroy(container,PetscObjectContainerDestroy_Mat_MatMatMultMPI);CHKERRQ(ierr); mult->MatDestroy = (*C)->ops->destroy; (*C)->ops->destroy = MatDestroy_MPIAIJ_MatMatMult; PetscFunctionReturn(0); } /* This routine is called ONLY in the case of reusing previously computed symbolic C */ #undef __FUNCT__ #define __FUNCT__ "MatMatMultNumeric_MPIAIJ_MPIAIJ" PetscErrorCode MatMatMultNumeric_MPIAIJ_MPIAIJ(Mat A,Mat B,Mat C) { PetscErrorCode ierr; Mat *seq; Mat_MatMatMultMPI *mult; PetscObjectContainer container; PetscFunctionBegin; ierr = PetscObjectQuery((PetscObject)C,"Mat_MatMatMultMPI",(PetscObject *)&container);CHKERRQ(ierr); if (container) { ierr = PetscObjectContainerGetPointer(container,(void **)&mult);CHKERRQ(ierr); } else { SETERRQ(PETSC_ERR_PLIB,"Container does not exit"); } seq = &mult->B_seq; ierr = MatGetSubMatrices(B,1,&mult->isrowb,&mult->iscolb,MAT_REUSE_MATRIX,&seq);CHKERRQ(ierr); mult->B_seq = *seq; seq = &mult->A_loc; ierr = MatGetSubMatrices(A,1,&mult->isrowa,&mult->isrowb,MAT_REUSE_MATRIX,&seq);CHKERRQ(ierr); mult->A_loc = *seq; ierr = MatMatMult_SeqAIJ_SeqAIJ(mult->A_loc,mult->B_seq,MAT_REUSE_MATRIX,0.0,&mult->C_seq);CHKERRQ(ierr); ierr = PetscObjectReference((PetscObject)mult->C_seq);CHKERRQ(ierr); ierr = MatMerge(A->comm,mult->C_seq,B->n,MAT_REUSE_MATRIX,&C);CHKERRQ(ierr); PetscFunctionReturn(0); }