#include /*I "petscmat.h" I*/ typedef struct { Mat A; } Mat_Transpose; PetscErrorCode MatMult_Transpose(Mat N,Vec x,Vec y) { Mat_Transpose *Na = (Mat_Transpose*)N->data; PetscErrorCode ierr; PetscFunctionBegin; ierr = MatMultTranspose(Na->A,x,y);CHKERRQ(ierr); PetscFunctionReturn(0); } PetscErrorCode MatMultAdd_Transpose(Mat N,Vec v1,Vec v2,Vec v3) { Mat_Transpose *Na = (Mat_Transpose*)N->data; PetscErrorCode ierr; PetscFunctionBegin; ierr = MatMultTransposeAdd(Na->A,v1,v2,v3);CHKERRQ(ierr); PetscFunctionReturn(0); } PetscErrorCode MatMultTranspose_Transpose(Mat N,Vec x,Vec y) { Mat_Transpose *Na = (Mat_Transpose*)N->data; PetscErrorCode ierr; PetscFunctionBegin; ierr = MatMult(Na->A,x,y);CHKERRQ(ierr); PetscFunctionReturn(0); } PetscErrorCode MatMultTransposeAdd_Transpose(Mat N,Vec v1,Vec v2,Vec v3) { Mat_Transpose *Na = (Mat_Transpose*)N->data; PetscErrorCode ierr; PetscFunctionBegin; ierr = MatMultAdd(Na->A,v1,v2,v3);CHKERRQ(ierr); PetscFunctionReturn(0); } PetscErrorCode MatDestroy_Transpose(Mat N) { Mat_Transpose *Na = (Mat_Transpose*)N->data; PetscErrorCode ierr; PetscFunctionBegin; ierr = MatDestroy(&Na->A);CHKERRQ(ierr); ierr = PetscObjectComposeFunction((PetscObject)N,"MatTransposeGetMat_C",NULL);CHKERRQ(ierr); ierr = PetscObjectComposeFunction((PetscObject)N,"MatProductSetFromOptions_anytype_C",NULL);CHKERRQ(ierr); ierr = PetscFree(N->data);CHKERRQ(ierr); PetscFunctionReturn(0); } PetscErrorCode MatDuplicate_Transpose(Mat N, MatDuplicateOption op, Mat* m) { Mat_Transpose *Na = (Mat_Transpose*)N->data; PetscErrorCode ierr; PetscFunctionBegin; if (op == MAT_COPY_VALUES) { ierr = MatTranspose(Na->A,MAT_INITIAL_MATRIX,m);CHKERRQ(ierr); } else if (op == MAT_DO_NOT_COPY_VALUES) { ierr = MatDuplicate(Na->A,MAT_DO_NOT_COPY_VALUES,m);CHKERRQ(ierr); ierr = MatTranspose(*m,MAT_INPLACE_MATRIX,m);CHKERRQ(ierr); } else SETERRQ(PetscObjectComm((PetscObject)N),PETSC_ERR_SUP,"MAT_SHARE_NONZERO_PATTERN not supported for this matrix type"); PetscFunctionReturn(0); } PetscErrorCode MatCreateVecs_Transpose(Mat A,Vec *r, Vec *l) { Mat_Transpose *Aa = (Mat_Transpose*)A->data; PetscErrorCode ierr; PetscFunctionBegin; ierr = MatCreateVecs(Aa->A,l,r);CHKERRQ(ierr); PetscFunctionReturn(0); } PetscErrorCode MatAXPY_Transpose(Mat Y,PetscScalar a,Mat X,MatStructure str) { Mat_Transpose *Ya = (Mat_Transpose*)Y->data; Mat_Transpose *Xa = (Mat_Transpose*)X->data; Mat M = Ya->A; Mat N = Xa->A; PetscErrorCode ierr; PetscFunctionBegin; ierr = MatAXPY(M,a,N,str);CHKERRQ(ierr); PetscFunctionReturn(0); } PetscErrorCode MatHasOperation_Transpose(Mat mat,MatOperation op,PetscBool *has) { Mat_Transpose *X = (Mat_Transpose*)mat->data; PetscErrorCode ierr; PetscFunctionBegin; *has = PETSC_FALSE; if (op == MATOP_MULT) { ierr = MatHasOperation(X->A,MATOP_MULT_TRANSPOSE,has);CHKERRQ(ierr); } else if (op == MATOP_MULT_TRANSPOSE) { ierr = MatHasOperation(X->A,MATOP_MULT,has);CHKERRQ(ierr); } else if (op == MATOP_MULT_ADD) { ierr = MatHasOperation(X->A,MATOP_MULT_TRANSPOSE_ADD,has);CHKERRQ(ierr); } else if (op == MATOP_MULT_TRANSPOSE_ADD) { ierr = MatHasOperation(X->A,MATOP_MULT_ADD,has);CHKERRQ(ierr); } else if (((void**)mat->ops)[op]) *has = PETSC_TRUE; PetscFunctionReturn(0); } /* used by hermitian transpose */ PETSC_INTERN PetscErrorCode MatProductSetFromOptions_Transpose(Mat D) { Mat A,B,C,Ain,Bin,Cin; PetscBool Aistrans,Bistrans,Cistrans; PetscInt Atrans,Btrans,Ctrans; MatProductType ptype; PetscErrorCode ierr; PetscFunctionBegin; MatCheckProduct(D,1); A = D->product->A; B = D->product->B; C = D->product->C; ierr = PetscObjectTypeCompare((PetscObject)A,MATTRANSPOSEMAT,&Aistrans);CHKERRQ(ierr); ierr = PetscObjectTypeCompare((PetscObject)B,MATTRANSPOSEMAT,&Bistrans);CHKERRQ(ierr); ierr = PetscObjectTypeCompare((PetscObject)C,MATTRANSPOSEMAT,&Cistrans);CHKERRQ(ierr); if (!Aistrans && !Bistrans && !Cistrans) SETERRQ(PetscObjectComm((PetscObject)D),PETSC_ERR_PLIB,"This should not happen"); Atrans = 0; Ain = A; while (Aistrans) { Atrans++; ierr = MatTransposeGetMat(Ain,&Ain);CHKERRQ(ierr); ierr = PetscObjectTypeCompare((PetscObject)Ain,MATTRANSPOSEMAT,&Aistrans);CHKERRQ(ierr); } Btrans = 0; Bin = B; while (Bistrans) { Btrans++; ierr = MatTransposeGetMat(Bin,&Bin);CHKERRQ(ierr); ierr = PetscObjectTypeCompare((PetscObject)Bin,MATTRANSPOSEMAT,&Bistrans);CHKERRQ(ierr); } Ctrans = 0; Cin = C; while (Cistrans) { Ctrans++; ierr = MatTransposeGetMat(Cin,&Cin);CHKERRQ(ierr); ierr = PetscObjectTypeCompare((PetscObject)Cin,MATTRANSPOSEMAT,&Cistrans);CHKERRQ(ierr); } Atrans = Atrans%2; Btrans = Btrans%2; Ctrans = Ctrans%2; ptype = D->product->type; /* same product type by default */ if (Ain->symmetric) Atrans = 0; if (Bin->symmetric) Btrans = 0; if (Cin && Cin->symmetric) Ctrans = 0; if (Atrans || Btrans || Ctrans) { ptype = MATPRODUCT_UNSPECIFIED; switch (D->product->type) { case MATPRODUCT_AB: if (Atrans && Btrans) { /* At * Bt we do not have support for this */ /* TODO custom implementation ? */ } else if (Atrans) { /* At * B */ ptype = MATPRODUCT_AtB; } else { /* A * Bt */ ptype = MATPRODUCT_ABt; } break; case MATPRODUCT_AtB: if (Atrans && Btrans) { /* A * Bt */ ptype = MATPRODUCT_ABt; } else if (Atrans) { /* A * B */ ptype = MATPRODUCT_AB; } else { /* At * Bt we do not have support for this */ /* TODO custom implementation ? */ } break; case MATPRODUCT_ABt: if (Atrans && Btrans) { /* At * B */ ptype = MATPRODUCT_AtB; } else if (Atrans) { /* At * Bt we do not have support for this */ /* TODO custom implementation ? */ } else { /* A * B */ ptype = MATPRODUCT_AB; } break; case MATPRODUCT_PtAP: if (Atrans) { /* PtAtP */ /* TODO custom implementation ? */ } else { /* RARt */ ptype = MATPRODUCT_RARt; } break; case MATPRODUCT_RARt: if (Atrans) { /* RAtRt */ /* TODO custom implementation ? */ } else { /* PtAP */ ptype = MATPRODUCT_PtAP; } break; case MATPRODUCT_ABC: /* TODO custom implementation ? */ break; default: SETERRQ1(PetscObjectComm((PetscObject)D),PETSC_ERR_SUP,"ProductType %s is not supported",MatProductTypes[D->product->type]); } } ierr = MatProductReplaceMats(Ain,Bin,Cin,D);CHKERRQ(ierr); ierr = MatProductSetType(D,ptype);CHKERRQ(ierr); ierr = MatProductSetFromOptions(D);CHKERRQ(ierr); PetscFunctionReturn(0); } PetscErrorCode MatTransposeGetMat_Transpose(Mat A,Mat *M) { Mat_Transpose *Aa = (Mat_Transpose*)A->data; PetscFunctionBegin; *M = Aa->A; PetscFunctionReturn(0); } /*@ MatTransposeGetMat - Gets the Mat object stored inside a MATTRANSPOSEMAT Logically collective on Mat Input Parameter: . A - the MATTRANSPOSE matrix Output Parameter: . M - the matrix object stored inside A Level: intermediate .seealso: MatCreateTranspose() @*/ PetscErrorCode MatTransposeGetMat(Mat A,Mat *M) { PetscErrorCode ierr; PetscFunctionBegin; PetscValidHeaderSpecific(A,MAT_CLASSID,1); PetscValidType(A,1); PetscValidPointer(M,2); ierr = PetscUseMethod(A,"MatTransposeGetMat_C",(Mat,Mat*),(A,M));CHKERRQ(ierr); PetscFunctionReturn(0); } /*@ MatCreateTranspose - Creates a new matrix object that behaves like A' Collective on Mat Input Parameter: . A - the (possibly rectangular) matrix Output Parameter: . N - the matrix that represents A' Level: intermediate Notes: The transpose A' is NOT actually formed! Rather the new matrix object performs the matrix-vector product by using the MatMultTranspose() on the original matrix .seealso: MatCreateNormal(), MatMult(), MatMultTranspose(), MatCreate() @*/ PetscErrorCode MatCreateTranspose(Mat A,Mat *N) { PetscErrorCode ierr; PetscInt m,n; Mat_Transpose *Na; VecType vtype; PetscFunctionBegin; ierr = MatGetLocalSize(A,&m,&n);CHKERRQ(ierr); ierr = MatCreate(PetscObjectComm((PetscObject)A),N);CHKERRQ(ierr); ierr = MatSetSizes(*N,n,m,PETSC_DECIDE,PETSC_DECIDE);CHKERRQ(ierr); ierr = PetscLayoutSetUp((*N)->rmap);CHKERRQ(ierr); ierr = PetscLayoutSetUp((*N)->cmap);CHKERRQ(ierr); ierr = PetscObjectChangeTypeName((PetscObject)*N,MATTRANSPOSEMAT);CHKERRQ(ierr); ierr = PetscNewLog(*N,&Na);CHKERRQ(ierr); (*N)->data = (void*) Na; ierr = PetscObjectReference((PetscObject)A);CHKERRQ(ierr); Na->A = A; (*N)->ops->destroy = MatDestroy_Transpose; (*N)->ops->mult = MatMult_Transpose; (*N)->ops->multadd = MatMultAdd_Transpose; (*N)->ops->multtranspose = MatMultTranspose_Transpose; (*N)->ops->multtransposeadd = MatMultTransposeAdd_Transpose; (*N)->ops->duplicate = MatDuplicate_Transpose; (*N)->ops->getvecs = MatCreateVecs_Transpose; (*N)->ops->axpy = MatAXPY_Transpose; (*N)->ops->hasoperation = MatHasOperation_Transpose; (*N)->ops->productsetfromoptions = MatProductSetFromOptions_Transpose; (*N)->assembled = PETSC_TRUE; ierr = PetscObjectComposeFunction((PetscObject)(*N),"MatTransposeGetMat_C",MatTransposeGetMat_Transpose);CHKERRQ(ierr); ierr = PetscObjectComposeFunction((PetscObject)(*N),"MatProductSetFromOptions_anytype_C",MatProductSetFromOptions_Transpose);CHKERRQ(ierr); ierr = MatSetBlockSizes(*N,PetscAbs(A->cmap->bs),PetscAbs(A->rmap->bs));CHKERRQ(ierr); ierr = MatGetVecType(A,&vtype);CHKERRQ(ierr); ierr = MatSetVecType(*N,vtype);CHKERRQ(ierr); #if defined(PETSC_HAVE_DEVICE) ierr = MatBindToCPU(*N,A->boundtocpu);CHKERRQ(ierr); #endif ierr = MatSetUp(*N);CHKERRQ(ierr); PetscFunctionReturn(0); }