#include const char *MatOptions[] = {"ROW_ORIENTED","NEW_NONZERO_LOCATIONS", "SYMMETRIC", "STRUCTURALLY_SYMMETRIC", "NEW_DIAGONALS", "IGNORE_OFF_PROC_ENTRIES", "NEW_NONZERO_LOCATION_ERR", "NEW_NONZERO_ALLOCATION_ERR","USE_HASH_TABLE", "KEEP_NONZERO_PATTERN","IGNORE_ZERO_ENTRIES","USE_INODES", "HERMITIAN", "SYMMETRY_ETERNAL", "CHECK_COMPRESSED_ROW", "IGNORE_LOWER_TRIANGULAR","ERROR_LOWER_TRIANGULAR","GETROW_UPPERTRIANGULAR","SPD","NO_OFF_PROC_ENTRIES","NO_OFF_PROC_ZERO_ROWS","MatOption","MAT_",0}; const char *const MatFactorShiftTypes[] = {"NONE","NONZERO","POSITIVE_DEFINITE","INBLOCKS","MatFactorShiftType","PC_FACTOR_",0}; const char *const MPPTScotchStrategyTypes[] = {"QUALITY","SPEED","BALANCE","SAFETY","SCALABILITY","MPPTScotchStrategyType","MP_PTSCOTCH_",0}; const char *const MPChacoGlobalTypes[] = {"","MULTILEVEL","SPECTRAL","","LINEAR","RANDOM","SCATTERED","MPChacoGlobalType","MP_CHACO_",0}; const char *const MPChacoLocalTypes[] = {"","KERNIGHAN","NONE","MPChacoLocalType","MP_CHACO_",0}; const char *const MPChacoEigenTypes[] = {"LANCZOS","RQI","MPChacoEigenType","MP_CHACO_",0}; extern PetscErrorCode MatMFFDInitializePackage(const char[]); static PetscBool MatPackageInitialized = PETSC_FALSE; #undef __FUNCT__ #define __FUNCT__ "MatFinalizePackage" /*@C MatFinalizePackage - This function destroys everything in the Petsc interface to the Mat package. It is called from PetscFinalize(). Level: developer .keywords: Petsc, destroy, package, mathematica .seealso: PetscFinalize() @*/ PetscErrorCode MatFinalizePackage(void) { MatBaseName nnames,names = MatBaseNameList; PetscErrorCode ierr; PetscFunctionBegin; while (names) { nnames = names->next; ierr = PetscFree(names->bname);CHKERRQ(ierr); ierr = PetscFree(names->sname);CHKERRQ(ierr); ierr = PetscFree(names->mname);CHKERRQ(ierr); ierr = PetscFree(names);CHKERRQ(ierr); names = nnames; } MatBaseNameList = PETSC_NULL; MatPackageInitialized = PETSC_FALSE; MatRegisterAllCalled = PETSC_FALSE; MatList = PETSC_NULL; MatOrderingRegisterAllCalled = PETSC_FALSE; MatOrderingList = PETSC_NULL; MatColoringList = PETSC_NULL; MatColoringRegisterAllCalled = PETSC_FALSE; MatPartitioningList = PETSC_NULL; MatPartitioningRegisterAllCalled = PETSC_FALSE; MatCoarsenList = PETSC_NULL; MatCoarsenRegisterAllCalled = PETSC_FALSE; PetscFunctionReturn(0); } #undef __FUNCT__ #define __FUNCT__ "MatInitializePackage" /*@C MatInitializePackage - This function initializes everything in the Mat package. It is called from PetscDLLibraryRegister() when using dynamic libraries, and on the first call to MatCreate() when using static libraries. Input Parameter: path - The dynamic library path, or PETSC_NULL Level: developer .keywords: Mat, initialize, package .seealso: PetscInitialize() @*/ PetscErrorCode MatInitializePackage(const char path[]) { char logList[256]; char *className; PetscBool opt; PetscErrorCode ierr; PetscFunctionBegin; if (MatPackageInitialized) PetscFunctionReturn(0); MatPackageInitialized = PETSC_TRUE; /* Inialize subpackage */ ierr = MatMFFDInitializePackage(path);CHKERRQ(ierr); /* Register Classes */ ierr = PetscClassIdRegister("Matrix",&MAT_CLASSID);CHKERRQ(ierr); ierr = PetscClassIdRegister("Matrix FD Coloring",&MAT_FDCOLORING_CLASSID);CHKERRQ(ierr); ierr = PetscClassIdRegister("Matrix MatTranspose Coloring",&MAT_TRANSPOSECOLORING_CLASSID);CHKERRQ(ierr); ierr = PetscClassIdRegister("Matrix Partitioning",&MAT_PARTITIONING_CLASSID);CHKERRQ(ierr); ierr = PetscClassIdRegister("Matrix Coarsen",&MAT_COARSEN_CLASSID);CHKERRQ(ierr); ierr = PetscClassIdRegister("Matrix Null Space",&MAT_NULLSPACE_CLASSID);CHKERRQ(ierr); /* Register Constructors */ ierr = MatRegisterAll(path);CHKERRQ(ierr); ierr = MatOrderingRegisterAll(path);CHKERRQ(ierr); ierr = MatColoringRegisterAll(path);CHKERRQ(ierr); ierr = MatPartitioningRegisterAll(path);CHKERRQ(ierr); ierr = MatCoarsenRegisterAll(path);CHKERRQ(ierr); /* Register Events */ ierr = PetscLogEventRegister("MatMult", MAT_CLASSID,&MAT_Mult);CHKERRQ(ierr); ierr = PetscLogEventRegister("MatMults", MAT_CLASSID,&MAT_Mults);CHKERRQ(ierr); ierr = PetscLogEventRegister("MatMultConstr", MAT_CLASSID,&MAT_MultConstrained);CHKERRQ(ierr); ierr = PetscLogEventRegister("MatMultAdd", MAT_CLASSID,&MAT_MultAdd);CHKERRQ(ierr); ierr = PetscLogEventRegister("MatMultTranspose", MAT_CLASSID,&MAT_MultTranspose);CHKERRQ(ierr); ierr = PetscLogEventRegister("MatMultTrConstr", MAT_CLASSID,&MAT_MultTransposeConstrained);CHKERRQ(ierr); ierr = PetscLogEventRegister("MatMultTrAdd", MAT_CLASSID,&MAT_MultTransposeAdd);CHKERRQ(ierr); ierr = PetscLogEventRegister("MatSolve", MAT_CLASSID,&MAT_Solve);CHKERRQ(ierr); ierr = PetscLogEventRegister("MatSolves", MAT_CLASSID,&MAT_Solves);CHKERRQ(ierr); ierr = PetscLogEventRegister("MatSolveAdd", MAT_CLASSID,&MAT_SolveAdd);CHKERRQ(ierr); ierr = PetscLogEventRegister("MatSolveTranspos", MAT_CLASSID,&MAT_SolveTranspose);CHKERRQ(ierr); ierr = PetscLogEventRegister("MatSolveTrAdd", MAT_CLASSID,&MAT_SolveTransposeAdd);CHKERRQ(ierr); ierr = PetscLogEventRegister("MatSOR", MAT_CLASSID,&MAT_SOR);CHKERRQ(ierr); ierr = PetscLogEventRegister("MatForwardSolve", MAT_CLASSID,&MAT_ForwardSolve);CHKERRQ(ierr); ierr = PetscLogEventRegister("MatBackwardSolve", MAT_CLASSID,&MAT_BackwardSolve);CHKERRQ(ierr); ierr = PetscLogEventRegister("MatLUFactor", MAT_CLASSID,&MAT_LUFactor);CHKERRQ(ierr); ierr = PetscLogEventRegister("MatLUFactorSym", MAT_CLASSID,&MAT_LUFactorSymbolic);CHKERRQ(ierr); ierr = PetscLogEventRegister("MatLUFactorNum", MAT_CLASSID,&MAT_LUFactorNumeric);CHKERRQ(ierr); ierr = PetscLogEventRegister("MatCholeskyFctr", MAT_CLASSID,&MAT_CholeskyFactor);CHKERRQ(ierr); ierr = PetscLogEventRegister("MatCholFctrSym", MAT_CLASSID,&MAT_CholeskyFactorSymbolic);CHKERRQ(ierr); ierr = PetscLogEventRegister("MatCholFctrNum", MAT_CLASSID,&MAT_CholeskyFactorNumeric);CHKERRQ(ierr); ierr = PetscLogEventRegister("MatILUFactor", MAT_CLASSID,&MAT_ILUFactor);CHKERRQ(ierr); ierr = PetscLogEventRegister("MatILUFactorSym", MAT_CLASSID,&MAT_ILUFactorSymbolic);CHKERRQ(ierr); ierr = PetscLogEventRegister("MatICCFactorSym", MAT_CLASSID,&MAT_ICCFactorSymbolic);CHKERRQ(ierr); ierr = PetscLogEventRegister("MatCopy", MAT_CLASSID,&MAT_Copy);CHKERRQ(ierr); ierr = PetscLogEventRegister("MatConvert", MAT_CLASSID,&MAT_Convert);CHKERRQ(ierr); ierr = PetscLogEventRegister("MatScale", MAT_CLASSID,&MAT_Scale);CHKERRQ(ierr); ierr = PetscLogEventRegister("MatAssemblyBegin", MAT_CLASSID,&MAT_AssemblyBegin);CHKERRQ(ierr); ierr = PetscLogEventRegister("MatAssemblyEnd", MAT_CLASSID,&MAT_AssemblyEnd);CHKERRQ(ierr); ierr = PetscLogEventRegister("MatSetValues", MAT_CLASSID,&MAT_SetValues);CHKERRQ(ierr); ierr = PetscLogEventRegister("MatGetValues", MAT_CLASSID,&MAT_GetValues);CHKERRQ(ierr); ierr = PetscLogEventRegister("MatGetRow", MAT_CLASSID,&MAT_GetRow);CHKERRQ(ierr); ierr = PetscLogEventRegister("MatGetRowIJ", MAT_CLASSID,&MAT_GetRowIJ);CHKERRQ(ierr); ierr = PetscLogEventRegister("MatGetSubMatrice", MAT_CLASSID,&MAT_GetSubMatrices);CHKERRQ(ierr); ierr = PetscLogEventRegister("MatGetColoring", MAT_CLASSID,&MAT_GetColoring);CHKERRQ(ierr); ierr = PetscLogEventRegister("MatGetOrdering", MAT_CLASSID,&MAT_GetOrdering);CHKERRQ(ierr); ierr = PetscLogEventRegister("MatIncreaseOvrlp", MAT_CLASSID,&MAT_IncreaseOverlap);CHKERRQ(ierr); ierr = PetscLogEventRegister("MatPartitioning", MAT_PARTITIONING_CLASSID,&MAT_Partitioning);CHKERRQ(ierr); ierr = PetscLogEventRegister("MatCoarsen", MAT_COARSEN_CLASSID,&MAT_Coarsen);CHKERRQ(ierr); ierr = PetscLogEventRegister("MatZeroEntries", MAT_CLASSID,&MAT_ZeroEntries);CHKERRQ(ierr); ierr = PetscLogEventRegister("MatLoad", MAT_CLASSID,&MAT_Load);CHKERRQ(ierr); ierr = PetscLogEventRegister("MatView", MAT_CLASSID,&MAT_View);CHKERRQ(ierr); ierr = PetscLogEventRegister("MatAXPY", MAT_CLASSID,&MAT_AXPY);CHKERRQ(ierr); ierr = PetscLogEventRegister("MatFDColorCreate", MAT_FDCOLORING_CLASSID,&MAT_FDColoringCreate);CHKERRQ(ierr); ierr = PetscLogEventRegister("MatFDColorApply", MAT_FDCOLORING_CLASSID,&MAT_FDColoringApply);CHKERRQ(ierr); ierr = PetscLogEventRegister("MatFDColorFunc", MAT_FDCOLORING_CLASSID,&MAT_FDColoringFunction);CHKERRQ(ierr); ierr = PetscLogEventRegister("MatTranspose", MAT_CLASSID,&MAT_Transpose);CHKERRQ(ierr); ierr = PetscLogEventRegister("MatMatMult", MAT_CLASSID,&MAT_MatMult);CHKERRQ(ierr); ierr = PetscLogEventRegister("MatMatSolve", MAT_CLASSID,&MAT_MatSolve);CHKERRQ(ierr); ierr = PetscLogEventRegister("MatMatMultSym", MAT_CLASSID,&MAT_MatMultSymbolic);CHKERRQ(ierr); ierr = PetscLogEventRegister("MatMatMultNum", MAT_CLASSID,&MAT_MatMultNumeric);CHKERRQ(ierr); ierr = PetscLogEventRegister("MatMatMatMult", MAT_CLASSID,&MAT_MatMatMult);CHKERRQ(ierr); ierr = PetscLogEventRegister("MatMatMatMultSym", MAT_CLASSID,&MAT_MatMatMultSymbolic);CHKERRQ(ierr); ierr = PetscLogEventRegister("MatMatMatMultNum", MAT_CLASSID,&MAT_MatMatMultNumeric);CHKERRQ(ierr); ierr = PetscLogEventRegister("MatPtAP", MAT_CLASSID,&MAT_PtAP);CHKERRQ(ierr); ierr = PetscLogEventRegister("MatPtAPSymbolic", MAT_CLASSID,&MAT_PtAPSymbolic);CHKERRQ(ierr); ierr = PetscLogEventRegister("MatPtAPNumeric", MAT_CLASSID,&MAT_PtAPNumeric);CHKERRQ(ierr); ierr = PetscLogEventRegister("MatRARt", MAT_CLASSID,&MAT_RARt);CHKERRQ(ierr); ierr = PetscLogEventRegister("MatRARtSymbolic", MAT_CLASSID,&MAT_RARtSymbolic);CHKERRQ(ierr); ierr = PetscLogEventRegister("MatRARtNumeric", MAT_CLASSID,&MAT_RARtNumeric);CHKERRQ(ierr); ierr = PetscLogEventRegister("MatMatTransMult", MAT_CLASSID,&MAT_MatTransposeMult);CHKERRQ(ierr); ierr = PetscLogEventRegister("MatMatTrnMultSym", MAT_CLASSID,&MAT_MatTransposeMultSymbolic);CHKERRQ(ierr); ierr = PetscLogEventRegister("MatMatTrnMultNum", MAT_CLASSID,&MAT_MatTransposeMultNumeric);CHKERRQ(ierr); ierr = PetscLogEventRegister("MatTrnMatMult", MAT_CLASSID,&MAT_TransposeMatMult);CHKERRQ(ierr); ierr = PetscLogEventRegister("MatTrnMatMultSym", MAT_CLASSID,&MAT_TransposeMatMultSymbolic);CHKERRQ(ierr); ierr = PetscLogEventRegister("MatTrnMatMultNum", MAT_CLASSID,&MAT_TransposeMatMultNumeric);CHKERRQ(ierr); ierr = PetscLogEventRegister("MatTrnColorCreate", MAT_CLASSID,&MAT_TransposeColoringCreate);CHKERRQ(ierr); ierr = PetscLogEventRegister("MatGetRedundant", MAT_CLASSID,&MAT_GetRedundantMatrix);CHKERRQ(ierr); ierr = PetscLogEventRegister("MatGetSeqNZStrct", MAT_CLASSID,&MAT_GetSequentialNonzeroStructure);CHKERRQ(ierr); ierr = PetscLogEventRegister("MatGetMultiProcBlock", MAT_CLASSID,&MAT_GetMultiProcBlock);CHKERRQ(ierr); /* these may be specific to MPIAIJ matrices */ ierr = PetscLogEventRegister("MatMPISumSeqNumeric",MAT_CLASSID,&MAT_Seqstompinum);CHKERRQ(ierr); ierr = PetscLogEventRegister("MatMPISumSeqSymbolic",MAT_CLASSID,&MAT_Seqstompisym);CHKERRQ(ierr); ierr = PetscLogEventRegister("MatMPISumSeq",MAT_CLASSID,&MAT_Seqstompi);CHKERRQ(ierr); ierr = PetscLogEventRegister("MatMPIConcateSeq",MAT_CLASSID,&MAT_Merge);CHKERRQ(ierr); ierr = PetscLogEventRegister("MatGetLocalMat",MAT_CLASSID,&MAT_Getlocalmat);CHKERRQ(ierr); ierr = PetscLogEventRegister("MatGetLocalMatCondensed",MAT_CLASSID,&MAT_Getlocalmatcondensed);CHKERRQ(ierr); ierr = PetscLogEventRegister("MatGetBrowsOfAcols",MAT_CLASSID,&MAT_GetBrowsOfAcols);CHKERRQ(ierr); ierr = PetscLogEventRegister("MatGetBrAoCol",MAT_CLASSID,&MAT_GetBrowsOfAocols);CHKERRQ(ierr); ierr = PetscLogEventRegister("MatApplyPAPt_Symbolic",MAT_CLASSID,&MAT_Applypapt_symbolic);CHKERRQ(ierr); ierr = PetscLogEventRegister("MatApplyPAPt_Numeric",MAT_CLASSID,&MAT_Applypapt_numeric);CHKERRQ(ierr); ierr = PetscLogEventRegister("MatApplyPAPt",MAT_CLASSID,&MAT_Applypapt);CHKERRQ(ierr); ierr = PetscLogEventRegister("MatGetSymTrans",MAT_CLASSID,&MAT_Getsymtranspose);CHKERRQ(ierr); ierr = PetscLogEventRegister("MatGetSymTransR",MAT_CLASSID,&MAT_Getsymtransreduced);CHKERRQ(ierr); ierr = PetscLogEventRegister("MatTranspose_SeqAIJ_FAST",MAT_CLASSID,&MAT_Transpose_SeqAIJ);CHKERRQ(ierr); ierr = PetscLogEventRegister("MatCUSPCopyTo",MAT_CLASSID,&MAT_CUSPCopyToGPU);CHKERRQ(ierr); ierr = PetscLogEventRegister("MatCUSPARSECopyTo",MAT_CLASSID,&MAT_CUSPARSECopyToGPU);CHKERRQ(ierr); ierr = PetscLogEventRegister("MatSetValBatch",MAT_CLASSID,&MAT_SetValuesBatch);CHKERRQ(ierr); ierr = PetscLogEventRegister("MatSetValBatch1",MAT_CLASSID,&MAT_SetValuesBatchI);CHKERRQ(ierr); ierr = PetscLogEventRegister("MatSetValBatch2",MAT_CLASSID,&MAT_SetValuesBatchII);CHKERRQ(ierr); ierr = PetscLogEventRegister("MatSetValBatch3",MAT_CLASSID,&MAT_SetValuesBatchIII);CHKERRQ(ierr); ierr = PetscLogEventRegister("MatSetValBatch4",MAT_CLASSID,&MAT_SetValuesBatchIV);CHKERRQ(ierr); /* Turn off high traffic events by default */ ierr = PetscLogEventSetActiveAll(MAT_SetValues, PETSC_FALSE);CHKERRQ(ierr); /* Process info exclusions */ ierr = PetscOptionsGetString(PETSC_NULL, "-info_exclude", logList, 256, &opt);CHKERRQ(ierr); if (opt) { ierr = PetscStrstr(logList, "mat", &className);CHKERRQ(ierr); if (className) { ierr = PetscInfoDeactivateClass(MAT_CLASSID);CHKERRQ(ierr); } } /* Process summary exclusions */ ierr = PetscOptionsGetString(PETSC_NULL, "-log_summary_exclude", logList, 256, &opt);CHKERRQ(ierr); if (opt) { ierr = PetscStrstr(logList, "mat", &className);CHKERRQ(ierr); if (className) { ierr = PetscLogEventDeactivateClass(MAT_CLASSID);CHKERRQ(ierr); } } ierr = PetscRegisterFinalize(MatFinalizePackage);CHKERRQ(ierr); PetscFunctionReturn(0); } #if defined(PETSC_USE_DYNAMIC_LIBRARIES) EXTERN_C_BEGIN #undef __FUNCT__ #define __FUNCT__ "PetscDLLibraryRegister_petscmat" /* PetscDLLibraryRegister - This function is called when the dynamic library it is in is opened. This one registers all the matrix methods that are in the basic PETSc Matrix library. Input Parameter: path - library path */ PetscErrorCode PetscDLLibraryRegister_petscmat(const char path[]) { PetscErrorCode ierr; PetscFunctionBegin; ierr = MatInitializePackage(path);CHKERRQ(ierr); PetscFunctionReturn(0); } EXTERN_C_END #endif /* PETSC_USE_DYNAMIC_LIBRARIES */