/* Routines to project vectors out of null spaces. */ #include "src/mat/matimpl.h" /*I "petscmat.h" I*/ #include "petscsys.h" PetscCookie MAT_NULLSPACE_COOKIE = 0; #undef __FUNCT__ #define __FUNCT__ "MatNullSpaceCreate" /*@C MatNullSpaceCreate - Creates a data structure used to project vectors out of null spaces. Collective on MPI_Comm Input Parameters: + comm - the MPI communicator associated with the object . has_cnst - PETSC_TRUE if the null space contains the constant vector; otherwise PETSC_FALSE . n - number of vectors (excluding constant vector) in null space - vecs - the vectors that span the null space (excluding the constant vector); these vectors must be orthonormal. These vectors are NOT copied, so do not change them after this call. You should free the array that you pass in. Output Parameter: . SP - the null space context Level: advanced Users manual sections: . sec_singular .keywords: PC, null space, create .seealso: MatNullSpaceDestroy(), MatNullSpaceRemove(), KSPSetNullSpace(), MatNullSpace @*/ PetscErrorCode MatNullSpaceCreate(MPI_Comm comm,PetscTruth has_cnst,PetscInt n,const Vec vecs[],MatNullSpace *SP) { MatNullSpace sp; PetscErrorCode ierr; PetscInt i; PetscFunctionBegin; ierr = PetscHeaderCreate(sp,_p_MatNullSpace,int,MAT_NULLSPACE_COOKIE,0,"MatNullSpace",comm,MatNullSpaceDestroy,0);CHKERRQ(ierr); ierr = PetscLogObjectMemory(sp,sizeof(struct _p_MatNullSpace));CHKERRQ(ierr); sp->has_cnst = has_cnst; sp->n = n; sp->vec = PETSC_NULL; if (n) { ierr = PetscMalloc(n*sizeof(Vec),&sp->vecs);CHKERRQ(ierr); for (i=0; ivecs[i] = vecs[i]; } else { sp->vecs = 0; } for (i=0; ivecs[i]);CHKERRQ(ierr); } *SP = sp; PetscFunctionReturn(0); } #undef __FUNCT__ #define __FUNCT__ "MatNullSpaceDestroy" /*@ MatNullSpaceDestroy - Destroys a data structure used to project vectors out of null spaces. Collective on MatNullSpace Input Parameter: . sp - the null space context to be destroyed Level: advanced .keywords: PC, null space, destroy .seealso: MatNullSpaceCreate(), MatNullSpaceRemove() @*/ PetscErrorCode MatNullSpaceDestroy(MatNullSpace sp) { PetscErrorCode ierr; PetscFunctionBegin; if (--sp->refct > 0) PetscFunctionReturn(0); if (sp->vec) {ierr = VecDestroy(sp->vec);CHKERRQ(ierr);} if (sp->vecs) { ierr = VecDestroyVecs(sp->vecs,sp->n);CHKERRQ(ierr); } ierr = PetscHeaderDestroy(sp);CHKERRQ(ierr); PetscFunctionReturn(0); } #undef __FUNCT__ #define __FUNCT__ "MatNullSpaceRemove" /*@ MatNullSpaceRemove - Removes all the components of a null space from a vector. Collective on MatNullSpace Input Parameters: + sp - the null space context . vec - the vector from which the null space is to be removed - out - if this is requested (not PETSC_NULL) then this is a vector with the null space removed otherwise the removal is done in-place (in vec) Level: advanced .keywords: PC, null space, remove .seealso: MatNullSpaceCreate(), MatNullSpaceDestroy() @*/ PetscErrorCode MatNullSpaceRemove(MatNullSpace sp,Vec vec,Vec *out) { PetscScalar sum; PetscErrorCode ierr; PetscInt j,n = sp->n,N; Vec l = vec; PetscFunctionBegin; if (out) { if (!sp->vec) { ierr = VecDuplicate(vec,&sp->vec);CHKERRQ(ierr); } *out = sp->vec; ierr = VecCopy(vec,*out);CHKERRQ(ierr); l = *out; } if (sp->has_cnst) { ierr = VecSum(l,&sum);CHKERRQ(ierr); ierr = VecGetSize(l,&N);CHKERRQ(ierr); sum = sum/(-1.0*N); ierr = VecShift(&sum,l);CHKERRQ(ierr); } for (j=0; jvecs[j],&sum);CHKERRQ(ierr); sum = -sum; ierr = VecAXPY(&sum,sp->vecs[j],l);CHKERRQ(ierr); } PetscFunctionReturn(0); } #undef __FUNCT__ #define __FUNCT__ "MatNullSpaceTest" /*@ MatNullSpaceTest - Tests if the claimed null space is really a null space of a matrix Collective on MatNullSpace Input Parameters: + sp - the null space context - mat - the matrix Level: advanced .keywords: PC, null space, remove .seealso: MatNullSpaceCreate(), MatNullSpaceDestroy() @*/ PetscErrorCode MatNullSpaceTest(MatNullSpace sp,Mat mat) { PetscScalar sum; PetscReal nrm; PetscInt j,n = sp->n,N,m; PetscErrorCode ierr; Vec l,r; MPI_Comm comm = sp->comm; PetscTruth flg1,flg2; PetscFunctionBegin; ierr = PetscOptionsHasName(PETSC_NULL,"-mat_null_space_test_view",&flg1);CHKERRQ(ierr); ierr = PetscOptionsHasName(PETSC_NULL,"-mat_null_space_test_view_draw",&flg2);CHKERRQ(ierr); if (!sp->vec) { if (n) { ierr = VecDuplicate(sp->vecs[0],&sp->vec);CHKERRQ(ierr); } else { ierr = MatGetLocalSize(mat,&m,PETSC_NULL);CHKERRQ(ierr); ierr = VecCreateMPI(sp->comm,m,PETSC_DETERMINE,&sp->vec);CHKERRQ(ierr); } } l = sp->vec; if (sp->has_cnst) { ierr = VecDuplicate(l,&r);CHKERRQ(ierr); ierr = VecGetSize(l,&N);CHKERRQ(ierr); sum = 1.0/N; ierr = VecSet(&sum,l);CHKERRQ(ierr); ierr = MatMult(mat,l,r);CHKERRQ(ierr); ierr = VecNorm(r,NORM_2,&nrm);CHKERRQ(ierr); if (nrm < 1.e-7) {ierr = PetscPrintf(comm,"Constants are likely null vector");CHKERRQ(ierr);} else {ierr = PetscPrintf(comm,"Constants are unlikely null vector ");CHKERRQ(ierr);} ierr = PetscPrintf(comm,"|| A * 1 || = %g\n",nrm);CHKERRQ(ierr); if (nrm > 1.e-7 && flg1) {ierr = VecView(r,PETSC_VIEWER_STDOUT_(comm));CHKERRQ(ierr);} if (nrm > 1.e-7 && flg2) {ierr = VecView(r,PETSC_VIEWER_DRAW_(comm));CHKERRQ(ierr);} ierr = VecDestroy(r);CHKERRQ(ierr); } for (j=0; jops->mult)(mat,sp->vecs[j],l);CHKERRQ(ierr); ierr = VecNorm(l,NORM_2,&nrm);CHKERRQ(ierr); if (nrm < 1.e-7) {ierr = PetscPrintf(comm,"Null vector %D is likely null vector",j);CHKERRQ(ierr);} else {ierr = PetscPrintf(comm,"Null vector %D unlikely null vector ",j);CHKERRQ(ierr);} ierr = PetscPrintf(comm,"|| A * v[%D] || = %g\n",j,nrm);CHKERRQ(ierr); if (nrm > 1.e-7 && flg1) {ierr = VecView(l,PETSC_VIEWER_STDOUT_(comm));CHKERRQ(ierr);} if (nrm > 1.e-7 && flg2) {ierr = VecView(l,PETSC_VIEWER_DRAW_(comm));CHKERRQ(ierr);} } PetscFunctionReturn(0); }