static char help[] = "Test sequential FFTW convolution\n\n"; /* Compiling the code: This code uses the complex numbers, so configure must be given --with-scalar-type=complex to enable this */ #include int main(int argc,char **args) { typedef enum {RANDOM, CONSTANT, TANH, NUM_FUNCS} FuncType; const char *funcNames[NUM_FUNCS] = {"random", "constant", "tanh"}; Mat A; PetscMPIInt size; PetscInt n = 10,N,ndim=4,dim[4],DIM,i,j; Vec w,x,y1,y2,z1,z2; PetscScalar *a, *a2, *a3; PetscScalar s; PetscRandom rdm; PetscReal enorm; PetscInt func = 0; FuncType function = RANDOM; PetscBool view = PETSC_FALSE; PetscErrorCode ierr; ierr = PetscInitialize(&argc,&args,(char*)0,help);if (ierr) return ierr; ierr = MPI_Comm_size(PETSC_COMM_WORLD, &size);CHKERRMPI(ierr); if (size != 1) SETERRQ(PETSC_COMM_WORLD,PETSC_ERR_SUP, "This is a uniprocessor example only!"); ierr = PetscOptionsBegin(PETSC_COMM_WORLD, NULL, "FFTW Options", "ex112");CHKERRQ(ierr); ierr = PetscOptionsEList("-function", "Function type", "ex121", funcNames, NUM_FUNCS, funcNames[function], &func, NULL);CHKERRQ(ierr); ierr = PetscOptionsBool("-vec_view draw", "View the functions", "ex112", view, &view, NULL);CHKERRQ(ierr); function = (FuncType) func; ierr = PetscOptionsEnd();CHKERRQ(ierr); for (DIM = 0; DIM < ndim; DIM++) { dim[DIM] = n; /* size of transformation in DIM-dimension */ } ierr = PetscRandomCreate(PETSC_COMM_SELF, &rdm);CHKERRQ(ierr); ierr = PetscRandomSetFromOptions(rdm);CHKERRQ(ierr); for (DIM = 1; DIM < 5; DIM++) { /* create vectors of length N=n^DIM */ for (i = 0, N = 1; i < DIM; i++) N *= dim[i]; ierr = PetscPrintf(PETSC_COMM_SELF, "\n %d-D: FFTW on vector of size %d \n",DIM,N);CHKERRQ(ierr); ierr = VecCreateSeq(PETSC_COMM_SELF,N,&x);CHKERRQ(ierr); ierr = PetscObjectSetName((PetscObject) x, "Real space vector");CHKERRQ(ierr); ierr = VecDuplicate(x,&w);CHKERRQ(ierr); ierr = PetscObjectSetName((PetscObject) w, "Window vector");CHKERRQ(ierr); ierr = VecDuplicate(x,&y1);CHKERRQ(ierr); ierr = PetscObjectSetName((PetscObject) y1, "Frequency space vector");CHKERRQ(ierr); ierr = VecDuplicate(x,&y2);CHKERRQ(ierr); ierr = PetscObjectSetName((PetscObject) y2, "Frequency space window vector");CHKERRQ(ierr); ierr = VecDuplicate(x,&z1);CHKERRQ(ierr); ierr = PetscObjectSetName((PetscObject) z1, "Reconstructed convolution");CHKERRQ(ierr); ierr = VecDuplicate(x,&z2);CHKERRQ(ierr); ierr = PetscObjectSetName((PetscObject) z2, "Real space convolution");CHKERRQ(ierr); if (function == RANDOM) { ierr = VecSetRandom(x, rdm);CHKERRQ(ierr); } else if (function == CONSTANT) { ierr = VecSet(x, 1.0);CHKERRQ(ierr); } else if (function == TANH) { ierr = VecGetArray(x, &a);CHKERRQ(ierr); for (i = 0; i < N; ++i) { a[i] = tanh((i - N/2.0)*(10.0/N)); } ierr = VecRestoreArray(x, &a);CHKERRQ(ierr); } if (view) {ierr = VecView(x, PETSC_VIEWER_DRAW_WORLD);CHKERRQ(ierr);} /* Create window function */ ierr = VecGetArray(w, &a);CHKERRQ(ierr); for (i = 0; i < N; ++i) { /* Step Function */ a[i] = (i > N/4 && i < 3*N/4) ? 1.0 : 0.0; /* Delta Function */ /*a[i] = (i == N/2)? 1.0: 0.0; */ } ierr = VecRestoreArray(w, &a);CHKERRQ(ierr); if (view) {ierr = VecView(w, PETSC_VIEWER_DRAW_WORLD);CHKERRQ(ierr);} /* create FFTW object */ ierr = MatCreateFFT(PETSC_COMM_SELF,DIM,dim,MATFFTW,&A);CHKERRQ(ierr); /* Convolve x with w*/ ierr = MatMult(A,x,y1);CHKERRQ(ierr); ierr = MatMult(A,w,y2);CHKERRQ(ierr); ierr = VecPointwiseMult(y1, y1, y2);CHKERRQ(ierr); if (view && i == 0) {ierr = VecView(y1, PETSC_VIEWER_DRAW_WORLD);CHKERRQ(ierr);} ierr = MatMultTranspose(A,y1,z1);CHKERRQ(ierr); /* Compute the real space convolution */ ierr = VecGetArray(x, &a);CHKERRQ(ierr); ierr = VecGetArray(w, &a2);CHKERRQ(ierr); ierr = VecGetArray(z2, &a3);CHKERRQ(ierr); for (i = 0; i < N; ++i) { /* PetscInt checkInd = (i > N/2-1)? i-N/2: i+N/2;*/ a3[i] = 0.0; for (j = -N/2+1; j < N/2; ++j) { PetscInt xpInd = (j < 0) ? N+j : j; PetscInt diffInd = (i-j < 0) ? N-(j-i) : (i-j > N-1) ? i-j-N : i-j; a3[i] += a[xpInd]*a2[diffInd]; } } ierr = VecRestoreArray(x, &a);CHKERRQ(ierr); ierr = VecRestoreArray(w, &a2);CHKERRQ(ierr); ierr = VecRestoreArray(z2, &a3);CHKERRQ(ierr); /* compare z1 and z2. FFTW computes an unnormalized DFT, thus z1 = N*z2 */ s = 1.0/(PetscReal)N; ierr = VecScale(z1,s);CHKERRQ(ierr); if (view) {ierr = VecView(z1, PETSC_VIEWER_DRAW_WORLD);CHKERRQ(ierr);} if (view) {ierr = VecView(z2, PETSC_VIEWER_DRAW_WORLD);CHKERRQ(ierr);} ierr = VecAXPY(z1,-1.0,z2);CHKERRQ(ierr); ierr = VecNorm(z1,NORM_1,&enorm);CHKERRQ(ierr); if (enorm > 1.e-11) { ierr = PetscPrintf(PETSC_COMM_SELF," Error norm of |z1 - z2| %g\n",(double)enorm);CHKERRQ(ierr); } /* free spaces */ ierr = VecDestroy(&x);CHKERRQ(ierr); ierr = VecDestroy(&y1);CHKERRQ(ierr); ierr = VecDestroy(&y2);CHKERRQ(ierr); ierr = VecDestroy(&z1);CHKERRQ(ierr); ierr = VecDestroy(&z2);CHKERRQ(ierr); ierr = VecDestroy(&w);CHKERRQ(ierr); ierr = MatDestroy(&A);CHKERRQ(ierr); } ierr = PetscRandomDestroy(&rdm);CHKERRQ(ierr); ierr = PetscFinalize(); return ierr; } /*TEST build: requires: fftw complex test: output_file: output/ex121.out TODO: Example or FFTW interface is broken TEST*/