static char help[] = "Illustrate how to use mpi FFTW and PETSc-FFTW interface \n\n"; /* Compiling the code: This code uses the complex numbers version of PETSc, so configure must be run to enable this Usage: mpiexec -n ./ex143 -use_FFTW_interface NO mpiexec -n ./ex143 -use_FFTW_interface YES */ #include #include int main(int argc,char **args) { PetscErrorCode ierr; PetscMPIInt rank,size; PetscInt N0=50,N1=20,N=N0*N1,DIM; PetscRandom rdm; PetscScalar a; PetscReal enorm; Vec x,y,z; PetscBool view=PETSC_FALSE,use_interface=PETSC_TRUE; ierr = PetscInitialize(&argc,&args,(char*)0,help);if (ierr) return ierr; ierr = PetscOptionsBegin(PETSC_COMM_WORLD, NULL, "FFTW Options", "ex143");CHKERRQ(ierr); ierr = PetscOptionsBool("-vec_view draw", "View the vectors", "ex143", view, &view, NULL);CHKERRQ(ierr); ierr = PetscOptionsBool("-use_FFTW_interface", "Use PETSc-FFTW interface", "ex143",use_interface, &use_interface, NULL);CHKERRQ(ierr); ierr = PetscOptionsEnd();CHKERRQ(ierr); ierr = PetscOptionsGetBool(NULL,NULL,"-use_FFTW_interface",&use_interface,NULL);CHKERRQ(ierr); ierr = MPI_Comm_size(PETSC_COMM_WORLD, &size);CHKERRMPI(ierr); ierr = MPI_Comm_rank(PETSC_COMM_WORLD, &rank);CHKERRMPI(ierr); ierr = PetscRandomCreate(PETSC_COMM_WORLD, &rdm);CHKERRQ(ierr); ierr = PetscRandomSetFromOptions(rdm);CHKERRQ(ierr); if (!use_interface) { /* Use mpi FFTW without PETSc-FFTW interface, 2D case only */ /*---------------------------------------------------------*/ fftw_plan fplan,bplan; fftw_complex *data_in,*data_out,*data_out2; ptrdiff_t alloc_local,local_n0,local_0_start; DIM = 2; if (rank == 0) { ierr = PetscPrintf(PETSC_COMM_SELF,"Use FFTW without PETSc-FFTW interface, DIM %D\n",DIM);CHKERRQ(ierr); } fftw_mpi_init(); N = N0*N1; alloc_local = fftw_mpi_local_size_2d(N0,N1,PETSC_COMM_WORLD,&local_n0,&local_0_start); data_in = (fftw_complex*)fftw_malloc(sizeof(fftw_complex)*alloc_local); data_out = (fftw_complex*)fftw_malloc(sizeof(fftw_complex)*alloc_local); data_out2 = (fftw_complex*)fftw_malloc(sizeof(fftw_complex)*alloc_local); ierr = VecCreateMPIWithArray(PETSC_COMM_WORLD,1,(PetscInt)local_n0*N1,(PetscInt)N,(const PetscScalar*)data_in,&x);CHKERRQ(ierr); ierr = PetscObjectSetName((PetscObject) x, "Real Space vector");CHKERRQ(ierr); ierr = VecCreateMPIWithArray(PETSC_COMM_WORLD,1,(PetscInt)local_n0*N1,(PetscInt)N,(const PetscScalar*)data_out,&y);CHKERRQ(ierr); ierr = PetscObjectSetName((PetscObject) y, "Frequency space vector");CHKERRQ(ierr); ierr = VecCreateMPIWithArray(PETSC_COMM_WORLD,1,(PetscInt)local_n0*N1,(PetscInt)N,(const PetscScalar*)data_out2,&z);CHKERRQ(ierr); ierr = PetscObjectSetName((PetscObject) z, "Reconstructed vector");CHKERRQ(ierr); fplan = fftw_mpi_plan_dft_2d(N0,N1,data_in,data_out,PETSC_COMM_WORLD,FFTW_FORWARD,FFTW_ESTIMATE); bplan = fftw_mpi_plan_dft_2d(N0,N1,data_out,data_out2,PETSC_COMM_WORLD,FFTW_BACKWARD,FFTW_ESTIMATE); ierr = VecSetRandom(x, rdm);CHKERRQ(ierr); if (view) {ierr = VecView(x,PETSC_VIEWER_STDOUT_WORLD);CHKERRQ(ierr);} fftw_execute(fplan); if (view) {ierr = VecView(y,PETSC_VIEWER_STDOUT_WORLD);CHKERRQ(ierr);} fftw_execute(bplan); /* Compare x and z. FFTW computes an unnormalized DFT, thus z = N*x */ a = 1.0/(PetscReal)N; ierr = VecScale(z,a);CHKERRQ(ierr); if (view) {ierr = VecView(z, PETSC_VIEWER_STDOUT_WORLD);CHKERRQ(ierr);} ierr = VecAXPY(z,-1.0,x);CHKERRQ(ierr); ierr = VecNorm(z,NORM_1,&enorm);CHKERRQ(ierr); if (enorm > 1.e-11 && rank == 0) { ierr = PetscPrintf(PETSC_COMM_SELF," Error norm of |x - z| %g\n",(double)enorm);CHKERRQ(ierr); } /* Free spaces */ fftw_destroy_plan(fplan); fftw_destroy_plan(bplan); fftw_free(data_in); ierr = VecDestroy(&x);CHKERRQ(ierr); fftw_free(data_out); ierr = VecDestroy(&y);CHKERRQ(ierr); fftw_free(data_out2);ierr = VecDestroy(&z);CHKERRQ(ierr); } else { /* Use PETSc-FFTW interface */ /*-------------------------------------------*/ PetscInt i,*dim,k; Mat A; N=1; for (i=1; i<5; i++) { DIM = i; ierr = PetscMalloc1(i,&dim);CHKERRQ(ierr); for (k=0; k 1.e-9 && rank == 0) { ierr = PetscPrintf(PETSC_COMM_SELF," Error norm of |x - z| %e\n",enorm);CHKERRQ(ierr); } ierr = VecDestroy(&x);CHKERRQ(ierr); ierr = VecDestroy(&y);CHKERRQ(ierr); ierr = VecDestroy(&z);CHKERRQ(ierr); ierr = MatDestroy(&A);CHKERRQ(ierr); ierr = PetscFree(dim);CHKERRQ(ierr); } } ierr = PetscRandomDestroy(&rdm);CHKERRQ(ierr); ierr = PetscFinalize(); return ierr; } /*TEST build: requires: fftw complex test: output_file: output/ex143.out test: suffix: 2 nsize: 3 output_file: output/ex143.out TEST*/