static char help[] = "Illustrate how to use mpi FFTW and PETSc-FFTW interface \n\n"; /* Usage: mpiexec -n ./ex158 -use_FFTW_interface NO mpiexec -n ./ex158 -use_FFTW_interface YES */ #include #include int main(int argc,char **args) { PetscErrorCode ierr; PetscMPIInt rank,size; PetscInt N0=50,N1=20,N=N0*N1; PetscRandom rdm; PetscScalar a; PetscReal enorm; Vec x,y,z; PetscBool view=PETSC_FALSE,use_interface=PETSC_TRUE; ierr = PetscInitialize(&argc,&args,(char*)0,help);if (ierr) return ierr; #if defined(PETSC_USE_COMPLEX) SETERRQ(PETSC_COMM_WORLD,PETSC_ERR_SUP, "This example requires real numbers. Your current scalar type is complex"); #endif ierr = PetscOptionsBegin(PETSC_COMM_WORLD, NULL, "FFTW Options", "ex158");CHKERRQ(ierr); ierr = PetscOptionsBool("-use_FFTW_interface", "Use PETSc-FFTW interface", "ex158",use_interface, &use_interface, NULL);CHKERRQ(ierr); ierr = PetscOptionsEnd();CHKERRQ(ierr); ierr = MPI_Comm_size(PETSC_COMM_WORLD, &size);CHKERRMPI(ierr); ierr = MPI_Comm_rank(PETSC_COMM_WORLD, &rank);CHKERRMPI(ierr); ierr = PetscRandomCreate(PETSC_COMM_WORLD, &rdm);CHKERRQ(ierr); ierr = PetscRandomSetFromOptions(rdm);CHKERRQ(ierr); if (!use_interface) { /* Use mpi FFTW without PETSc-FFTW interface, 2D case only */ /*---------------------------------------------------------*/ fftw_plan fplan,bplan; fftw_complex *data_in,*data_out,*data_out2; ptrdiff_t alloc_local,local_n0,local_0_start; if (rank == 0) printf("Use FFTW without PETSc-FFTW interface\n"); fftw_mpi_init(); N = N0*N1; alloc_local = fftw_mpi_local_size_2d(N0,N1,PETSC_COMM_WORLD,&local_n0,&local_0_start); data_in = (fftw_complex*)fftw_malloc(sizeof(fftw_complex)*alloc_local); data_out = (fftw_complex*)fftw_malloc(sizeof(fftw_complex)*alloc_local); data_out2 = (fftw_complex*)fftw_malloc(sizeof(fftw_complex)*alloc_local); ierr = VecCreateMPIWithArray(PETSC_COMM_WORLD,1,(PetscInt)local_n0*N1,(PetscInt)N,(const PetscScalar*)data_in,&x);CHKERRQ(ierr); ierr = PetscObjectSetName((PetscObject) x, "Real Space vector");CHKERRQ(ierr); ierr = VecCreateMPIWithArray(PETSC_COMM_WORLD,1,(PetscInt)local_n0*N1,(PetscInt)N,(const PetscScalar*)data_out,&y);CHKERRQ(ierr); ierr = PetscObjectSetName((PetscObject) y, "Frequency space vector");CHKERRQ(ierr); ierr = VecCreateMPIWithArray(PETSC_COMM_WORLD,1,(PetscInt)local_n0*N1,(PetscInt)N,(const PetscScalar*)data_out2,&z);CHKERRQ(ierr); ierr = PetscObjectSetName((PetscObject) z, "Reconstructed vector");CHKERRQ(ierr); fplan = fftw_mpi_plan_dft_2d(N0,N1,data_in,data_out,PETSC_COMM_WORLD,FFTW_FORWARD,FFTW_ESTIMATE); bplan = fftw_mpi_plan_dft_2d(N0,N1,data_out,data_out2,PETSC_COMM_WORLD,FFTW_BACKWARD,FFTW_ESTIMATE); ierr = VecSetRandom(x, rdm);CHKERRQ(ierr); if (view) {ierr = VecView(x,PETSC_VIEWER_STDOUT_WORLD);CHKERRQ(ierr);} fftw_execute(fplan); if (view) {ierr = VecView(y,PETSC_VIEWER_STDOUT_WORLD);CHKERRQ(ierr);} fftw_execute(bplan); /* Compare x and z. FFTW computes an unnormalized DFT, thus z = N*x */ a = 1.0/(PetscReal)N; ierr = VecScale(z,a);CHKERRQ(ierr); if (view) {ierr = VecView(z, PETSC_VIEWER_STDOUT_WORLD);CHKERRQ(ierr);} ierr = VecAXPY(z,-1.0,x);CHKERRQ(ierr); ierr = VecNorm(z,NORM_1,&enorm);CHKERRQ(ierr); if (enorm > 1.e-11) { ierr = PetscPrintf(PETSC_COMM_SELF," Error norm of |x - z| %g\n",(double)enorm);CHKERRQ(ierr); } /* Free spaces */ fftw_destroy_plan(fplan); fftw_destroy_plan(bplan); fftw_free(data_in); ierr = VecDestroy(&x);CHKERRQ(ierr); fftw_free(data_out); ierr = VecDestroy(&y);CHKERRQ(ierr); fftw_free(data_out2);ierr = VecDestroy(&z);CHKERRQ(ierr); } else { /* Use PETSc-FFTW interface */ /*-------------------------------------------*/ PetscInt i,*dim,k,DIM; Mat A; Vec input,output; N=30; for (i=2; i<3; i++) { /* (i=3,4: -- error in VecScatterPetscToFFTW(A,input,x); */ DIM = i; ierr = PetscMalloc1(i,&dim);CHKERRQ(ierr); for (k=0; k 1.e-09 && rank == 0) { ierr = PetscPrintf(PETSC_COMM_SELF," Error norm of |x - z| %e\n",enorm);CHKERRQ(ierr); } /* Free spaces */ ierr = PetscFree(dim);CHKERRQ(ierr); ierr = VecDestroy(&input);CHKERRQ(ierr); ierr = VecDestroy(&output);CHKERRQ(ierr); ierr = VecDestroy(&x);CHKERRQ(ierr); ierr = VecDestroy(&y);CHKERRQ(ierr); ierr = VecDestroy(&z);CHKERRQ(ierr); ierr = MatDestroy(&A);CHKERRQ(ierr); } } ierr = PetscRandomDestroy(&rdm);CHKERRQ(ierr); ierr = PetscFinalize(); return ierr; } /*TEST build: requires: fftw !complex test: output_file: output/ex158.out test: suffix: 2 nsize: 3 TEST*/