static char help[] = "Tests MatSolve() and MatMatSolve() with MUMPS or MKL_PARDISO sequential solvers in Schur complement mode.\n\ Example: mpiexec -n 1 ./ex192 -f -nrhs 4 -symmetric_solve -hermitian_solve -schur_ratio 0.3\n\n"; #include int main(int argc,char **args) { Mat A,RHS,C,F,X,S; Vec u,x,b; Vec xschur,bschur,uschur; IS is_schur; PetscMPIInt size; PetscInt isolver=0,size_schur,m,n,nfact,nsolve,nrhs; PetscReal norm,tol=PETSC_SQRT_MACHINE_EPSILON; PetscRandom rand; PetscBool data_provided,herm,symm,use_lu,cuda = PETSC_FALSE; PetscReal sratio = 5.1/12.; PetscViewer fd; /* viewer */ char solver[256]; char file[PETSC_MAX_PATH_LEN]; /* input file name */ PetscCall(PetscInitialize(&argc,&args,(char*)0,help)); PetscCallMPI(MPI_Comm_size(PETSC_COMM_WORLD, &size)); PetscCheck(size == 1,PETSC_COMM_WORLD,PETSC_ERR_WRONG_MPI_SIZE,"This is a uniprocessor test"); /* Determine which type of solver we want to test for */ herm = PETSC_FALSE; symm = PETSC_FALSE; PetscCall(PetscOptionsGetBool(NULL,NULL,"-symmetric_solve",&symm,NULL)); PetscCall(PetscOptionsGetBool(NULL,NULL,"-hermitian_solve",&herm,NULL)); if (herm) symm = PETSC_TRUE; PetscCall(PetscOptionsGetBool(NULL,NULL,"-cuda_solve",&cuda,NULL)); PetscCall(PetscOptionsGetReal(NULL,NULL,"-tol",&tol,NULL)); /* Determine file from which we read the matrix A */ PetscCall(PetscOptionsGetString(NULL,NULL,"-f",file,sizeof(file),&data_provided)); if (!data_provided) { /* get matrices from PETSc distribution */ PetscCall(PetscStrncpy(file,"${PETSC_DIR}/share/petsc/datafiles/matrices/",sizeof(file))); if (symm) { #if defined (PETSC_USE_COMPLEX) PetscCall(PetscStrlcat(file,"hpd-complex-",sizeof(file))); #else PetscCall(PetscStrlcat(file,"spd-real-",sizeof(file))); #endif } else { #if defined (PETSC_USE_COMPLEX) PetscCall(PetscStrlcat(file,"nh-complex-",sizeof(file))); #else PetscCall(PetscStrlcat(file,"ns-real-",sizeof(file))); #endif } #if defined(PETSC_USE_64BIT_INDICES) PetscCall(PetscStrlcat(file,"int64-",sizeof(file))); #else PetscCall(PetscStrlcat(file,"int32-",sizeof(file))); #endif #if defined (PETSC_USE_REAL_SINGLE) PetscCall(PetscStrlcat(file,"float32",sizeof(file))); #else PetscCall(PetscStrlcat(file,"float64",sizeof(file))); #endif } /* Load matrix A */ PetscCall(PetscViewerBinaryOpen(PETSC_COMM_WORLD,file,FILE_MODE_READ,&fd)); PetscCall(MatCreate(PETSC_COMM_WORLD,&A)); PetscCall(MatLoad(A,fd)); PetscCall(PetscViewerDestroy(&fd)); PetscCall(MatGetSize(A,&m,&n)); PetscCheck(m == n,PETSC_COMM_SELF,PETSC_ERR_ARG_SIZ, "This example is not intended for rectangular matrices (%" PetscInt_FMT ", %" PetscInt_FMT ")", m, n); /* Create dense matrix C and X; C holds true solution with identical columns */ nrhs = 2; PetscCall(PetscOptionsGetInt(NULL,NULL,"-nrhs",&nrhs,NULL)); PetscCall(MatCreate(PETSC_COMM_WORLD,&C)); PetscCall(MatSetSizes(C,m,PETSC_DECIDE,PETSC_DECIDE,nrhs)); PetscCall(MatSetType(C,MATDENSE)); PetscCall(MatSetFromOptions(C)); PetscCall(MatSetUp(C)); PetscCall(PetscRandomCreate(PETSC_COMM_WORLD,&rand)); PetscCall(PetscRandomSetFromOptions(rand)); PetscCall(MatSetRandom(C,rand)); PetscCall(MatDuplicate(C,MAT_DO_NOT_COPY_VALUES,&X)); /* Create vectors */ PetscCall(VecCreate(PETSC_COMM_WORLD,&x)); PetscCall(VecSetSizes(x,n,PETSC_DECIDE)); PetscCall(VecSetFromOptions(x)); PetscCall(VecDuplicate(x,&b)); PetscCall(VecDuplicate(x,&u)); /* save the true solution */ PetscCall(PetscOptionsGetInt(NULL,NULL,"-solver",&isolver,NULL)); switch (isolver) { #if defined(PETSC_HAVE_MUMPS) case 0: PetscCall(PetscStrcpy(solver,MATSOLVERMUMPS)); break; #endif #if defined(PETSC_HAVE_MKL_PARDISO) case 1: PetscCall(PetscStrcpy(solver,MATSOLVERMKL_PARDISO)); break; #endif default: PetscCall(PetscStrcpy(solver,MATSOLVERPETSC)); break; } #if defined (PETSC_USE_COMPLEX) if (isolver == 0 && symm && !data_provided) { /* MUMPS (5.0.0) does not have support for hermitian matrices, so make them symmetric */ PetscScalar im = PetscSqrtScalar((PetscScalar)-1.); PetscScalar val = -1.0; val = val + im; PetscCall(MatSetValue(A,1,0,val,INSERT_VALUES)); PetscCall(MatAssemblyBegin(A,MAT_FINAL_ASSEMBLY)); PetscCall(MatAssemblyEnd(A,MAT_FINAL_ASSEMBLY)); } #endif PetscCall(PetscOptionsGetReal(NULL,NULL,"-schur_ratio",&sratio,NULL)); PetscCheck(sratio >= 0. && sratio <= 1.,PETSC_COMM_SELF,PETSC_ERR_ARG_SIZ, "Invalid ratio for schur degrees of freedom %g", (double)sratio); size_schur = (PetscInt)(sratio*m); PetscCall(PetscPrintf(PETSC_COMM_SELF,"Solving with %s: nrhs %" PetscInt_FMT ", sym %d, herm %d, size schur %" PetscInt_FMT ", size mat %" PetscInt_FMT "\n",solver,nrhs,symm,herm,size_schur,m)); /* Test LU/Cholesky Factorization */ use_lu = PETSC_FALSE; if (!symm) use_lu = PETSC_TRUE; #if defined (PETSC_USE_COMPLEX) if (isolver == 1) use_lu = PETSC_TRUE; #endif if (cuda && symm && !herm) use_lu = PETSC_TRUE; if (herm && !use_lu) { /* test also conversion routines inside the solver packages */ PetscCall(MatSetOption(A,MAT_SYMMETRIC,PETSC_TRUE)); PetscCall(MatConvert(A,MATSEQSBAIJ,MAT_INPLACE_MATRIX,&A)); } if (use_lu) { PetscCall(MatGetFactor(A,solver,MAT_FACTOR_LU,&F)); } else { if (herm) { PetscCall(MatSetOption(A,MAT_SPD,PETSC_TRUE)); } else { PetscCall(MatSetOption(A,MAT_SYMMETRIC,PETSC_TRUE)); PetscCall(MatSetOption(A,MAT_SPD,PETSC_FALSE)); } PetscCall(MatGetFactor(A,solver,MAT_FACTOR_CHOLESKY,&F)); } PetscCall(ISCreateStride(PETSC_COMM_SELF,size_schur,m-size_schur,1,&is_schur)); PetscCall(MatFactorSetSchurIS(F,is_schur)); PetscCall(ISDestroy(&is_schur)); if (use_lu) { PetscCall(MatLUFactorSymbolic(F,A,NULL,NULL,NULL)); } else { PetscCall(MatCholeskyFactorSymbolic(F,A,NULL,NULL)); } for (nfact = 0; nfact < 3; nfact++) { Mat AD; if (!nfact) { PetscCall(VecSetRandom(x,rand)); if (symm && herm) { PetscCall(VecAbs(x)); } PetscCall(MatDiagonalSet(A,x,ADD_VALUES)); } if (use_lu) { PetscCall(MatLUFactorNumeric(F,A,NULL)); } else { PetscCall(MatCholeskyFactorNumeric(F,A,NULL)); } if (cuda) { PetscCall(MatFactorGetSchurComplement(F,&S,NULL)); PetscCall(MatSetType(S,MATSEQDENSECUDA)); PetscCall(MatCreateVecs(S,&xschur,&bschur)); PetscCall(MatFactorRestoreSchurComplement(F,&S,MAT_FACTOR_SCHUR_UNFACTORED)); } PetscCall(MatFactorCreateSchurComplement(F,&S,NULL)); if (!cuda) { PetscCall(MatCreateVecs(S,&xschur,&bschur)); } PetscCall(VecDuplicate(xschur,&uschur)); if (nfact == 1 && (!cuda || (herm && symm))) { PetscCall(MatFactorInvertSchurComplement(F)); } for (nsolve = 0; nsolve < 2; nsolve++) { PetscCall(VecSetRandom(x,rand)); PetscCall(VecCopy(x,u)); if (nsolve) { PetscCall(MatMult(A,x,b)); PetscCall(MatSolve(F,b,x)); } else { PetscCall(MatMultTranspose(A,x,b)); PetscCall(MatSolveTranspose(F,b,x)); } /* Check the error */ PetscCall(VecAXPY(u,-1.0,x)); /* u <- (-1.0)x + u */ PetscCall(VecNorm(u,NORM_2,&norm)); if (norm > tol) { PetscReal resi; if (nsolve) { PetscCall(MatMult(A,x,u)); /* u = A*x */ } else { PetscCall(MatMultTranspose(A,x,u)); /* u = A*x */ } PetscCall(VecAXPY(u,-1.0,b)); /* u <- (-1.0)b + u */ PetscCall(VecNorm(u,NORM_2,&resi)); if (nsolve) { PetscCall(PetscPrintf(PETSC_COMM_SELF,"(f %" PetscInt_FMT ", s %" PetscInt_FMT ") MatSolve error: Norm of error %g, residual %g\n",nfact,nsolve,(double)norm,(double)resi)); } else { PetscCall(PetscPrintf(PETSC_COMM_SELF,"(f %" PetscInt_FMT ", s %" PetscInt_FMT ") MatSolveTranspose error: Norm of error %g, residual %f\n",nfact,nsolve,(double)norm,(double)resi)); } } PetscCall(VecSetRandom(xschur,rand)); PetscCall(VecCopy(xschur,uschur)); if (nsolve) { PetscCall(MatMult(S,xschur,bschur)); PetscCall(MatFactorSolveSchurComplement(F,bschur,xschur)); } else { PetscCall(MatMultTranspose(S,xschur,bschur)); PetscCall(MatFactorSolveSchurComplementTranspose(F,bschur,xschur)); } /* Check the error */ PetscCall(VecAXPY(uschur,-1.0,xschur)); /* u <- (-1.0)x + u */ PetscCall(VecNorm(uschur,NORM_2,&norm)); if (norm > tol) { PetscReal resi; if (nsolve) { PetscCall(MatMult(S,xschur,uschur)); /* u = A*x */ } else { PetscCall(MatMultTranspose(S,xschur,uschur)); /* u = A*x */ } PetscCall(VecAXPY(uschur,-1.0,bschur)); /* u <- (-1.0)b + u */ PetscCall(VecNorm(uschur,NORM_2,&resi)); if (nsolve) { PetscCall(PetscPrintf(PETSC_COMM_SELF,"(f %" PetscInt_FMT ", s %" PetscInt_FMT ") MatFactorSolveSchurComplement error: Norm of error %g, residual %g\n",nfact,nsolve,(double)norm,(double)resi)); } else { PetscCall(PetscPrintf(PETSC_COMM_SELF,"(f %" PetscInt_FMT ", s %" PetscInt_FMT ") MatFactorSolveSchurComplementTranspose error: Norm of error %g, residual %f\n",nfact,nsolve,(double)norm,(double)resi)); } } } PetscCall(MatConvert(A,MATSEQAIJ,MAT_INITIAL_MATRIX,&AD)); if (!nfact) { PetscCall(MatMatMult(AD,C,MAT_INITIAL_MATRIX,2.0,&RHS)); } else { PetscCall(MatMatMult(AD,C,MAT_REUSE_MATRIX,2.0,&RHS)); } PetscCall(MatDestroy(&AD)); for (nsolve = 0; nsolve < 2; nsolve++) { PetscCall(MatMatSolve(F,RHS,X)); /* Check the error */ PetscCall(MatAXPY(X,-1.0,C,SAME_NONZERO_PATTERN)); PetscCall(MatNorm(X,NORM_FROBENIUS,&norm)); if (norm > tol) { PetscCall(PetscPrintf(PETSC_COMM_SELF,"(f %" PetscInt_FMT ", s %" PetscInt_FMT ") MatMatSolve: Norm of error %g\n",nfact,nsolve,(double)norm)); } } if (isolver == 0) { Mat spRHS,spRHST,RHST; PetscCall(MatTranspose(RHS,MAT_INITIAL_MATRIX,&RHST)); PetscCall(MatConvert(RHST,MATSEQAIJ,MAT_INITIAL_MATRIX,&spRHST)); PetscCall(MatCreateTranspose(spRHST,&spRHS)); for (nsolve = 0; nsolve < 2; nsolve++) { PetscCall(MatMatSolve(F,spRHS,X)); /* Check the error */ PetscCall(MatAXPY(X,-1.0,C,SAME_NONZERO_PATTERN)); PetscCall(MatNorm(X,NORM_FROBENIUS,&norm)); if (norm > tol) { PetscCall(PetscPrintf(PETSC_COMM_SELF,"(f %" PetscInt_FMT ", s %" PetscInt_FMT ") sparse MatMatSolve: Norm of error %g\n",nfact,nsolve,(double)norm)); } } PetscCall(MatDestroy(&spRHST)); PetscCall(MatDestroy(&spRHS)); PetscCall(MatDestroy(&RHST)); } PetscCall(MatDestroy(&S)); PetscCall(VecDestroy(&xschur)); PetscCall(VecDestroy(&bschur)); PetscCall(VecDestroy(&uschur)); } /* Free data structures */ PetscCall(MatDestroy(&A)); PetscCall(MatDestroy(&C)); PetscCall(MatDestroy(&F)); PetscCall(MatDestroy(&X)); PetscCall(MatDestroy(&RHS)); PetscCall(PetscRandomDestroy(&rand)); PetscCall(VecDestroy(&x)); PetscCall(VecDestroy(&b)); PetscCall(VecDestroy(&u)); PetscCall(PetscFinalize()); return 0; } /*TEST testset: requires: mkl_pardiso double !complex args: -solver 1 test: suffix: mkl_pardiso test: requires: cuda suffix: mkl_pardiso_cuda args: -cuda_solve output_file: output/ex192_mkl_pardiso.out test: suffix: mkl_pardiso_1 args: -symmetric_solve output_file: output/ex192_mkl_pardiso_1.out test: requires: cuda suffix: mkl_pardiso_cuda_1 args: -symmetric_solve -cuda_solve output_file: output/ex192_mkl_pardiso_1.out test: suffix: mkl_pardiso_3 args: -symmetric_solve -hermitian_solve output_file: output/ex192_mkl_pardiso_3.out test: requires: cuda defined(PETSC_HAVE_CUSOLVERDNDPOTRI) suffix: mkl_pardiso_cuda_3 args: -symmetric_solve -hermitian_solve -cuda_solve output_file: output/ex192_mkl_pardiso_3.out testset: requires: mumps double !complex args: -solver 0 test: suffix: mumps test: requires: cuda suffix: mumps_cuda args: -cuda_solve output_file: output/ex192_mumps.out test: suffix: mumps_2 args: -symmetric_solve output_file: output/ex192_mumps_2.out test: requires: cuda suffix: mumps_cuda_2 args: -symmetric_solve -cuda_solve output_file: output/ex192_mumps_2.out test: suffix: mumps_3 args: -symmetric_solve -hermitian_solve output_file: output/ex192_mumps_3.out test: requires: cuda defined(PETSC_HAVE_CUSOLVERDNDPOTRI) suffix: mumps_cuda_3 args: -symmetric_solve -hermitian_solve -cuda_solve output_file: output/ex192_mumps_3.out TEST*/