static char help[] = "Tests MatCreateSubmatrix() in parallel.";

#include <petscmat.h>
#include <../src/mat/impls/aij/mpi/mpiaij.h>

PetscErrorCode ISGetSeqIS_SameColDist_Private(Mat mat, IS isrow, IS iscol, IS *isrow_d, IS *iscol_d, IS *iscol_o, const PetscInt *garray[])
{
  Vec             x, cmap;
  const PetscInt *is_idx;
  PetscScalar    *xarray, *cmaparray;
  PetscInt        ncols, isstart, *idx, m, rstart, count;
  Mat_MPIAIJ     *a    = (Mat_MPIAIJ *)mat->data;
  Mat             B    = a->B;
  Vec             lvec = a->lvec, lcmap;
  PetscInt        i, cstart, cend, Bn = B->cmap->N;
  MPI_Comm        comm;
  PetscMPIInt     rank;
  VecScatter      Mvctx;

  PetscFunctionBegin;
  PetscCall(PetscObjectGetComm((PetscObject)mat, &comm));
  PetscCallMPI(MPI_Comm_rank(comm, &rank));
  PetscCall(ISGetLocalSize(iscol, &ncols));

  /* (1) iscol is a sub-column vector of mat, pad it with '-1.' to form a full vector x */
  PetscCall(MatCreateVecs(mat, &x, NULL));
  PetscCall(VecDuplicate(x, &cmap));
  PetscCall(VecSet(x, -1.0));
  PetscCall(VecSet(cmap, -1.0));

  PetscCall(VecDuplicate(lvec, &lcmap));

  /* Get start indices */
  PetscCallMPI(MPI_Scan(&ncols, &isstart, 1, MPIU_INT, MPI_SUM, comm));
  isstart -= ncols;
  PetscCall(MatGetOwnershipRangeColumn(mat, &cstart, &cend));

  PetscCall(ISGetIndices(iscol, &is_idx));
  PetscCall(VecGetArray(x, &xarray));
  PetscCall(VecGetArray(cmap, &cmaparray));
  PetscCall(PetscMalloc1(ncols, &idx));
  for (i = 0; i < ncols; i++) {
    xarray[is_idx[i] - cstart]    = (PetscScalar)is_idx[i];
    cmaparray[is_idx[i] - cstart] = (PetscScalar)(i + isstart); /* global index of iscol[i] */
    idx[i]                        = is_idx[i] - cstart;         /* local index of iscol[i]  */
  }
  PetscCall(VecRestoreArray(x, &xarray));
  PetscCall(VecRestoreArray(cmap, &cmaparray));
  PetscCall(ISRestoreIndices(iscol, &is_idx));

  /* Get iscol_d */
  PetscCall(ISCreateGeneral(PETSC_COMM_SELF, ncols, idx, PETSC_OWN_POINTER, iscol_d));
  PetscCall(ISGetBlockSize(iscol, &i));
  PetscCall(ISSetBlockSize(*iscol_d, i));

  /* Get isrow_d */
  PetscCall(ISGetLocalSize(isrow, &m));
  rstart = mat->rmap->rstart;
  PetscCall(PetscMalloc1(m, &idx));
  PetscCall(ISGetIndices(isrow, &is_idx));
  for (i = 0; i < m; i++) idx[i] = is_idx[i] - rstart;
  PetscCall(ISRestoreIndices(isrow, &is_idx));

  PetscCall(ISCreateGeneral(PETSC_COMM_SELF, m, idx, PETSC_OWN_POINTER, isrow_d));
  PetscCall(ISGetBlockSize(isrow, &i));
  PetscCall(ISSetBlockSize(*isrow_d, i));

  /* (2) Scatter x and cmap using aij->Mvctx to get their off-process portions (see MatMult_MPIAIJ) */
#if 0
  if (!a->Mvctx_mpi1) {
    /* a->Mvctx causes random 'count' in o-build? See src/mat/tests/runex59_2 */
    a->Mvctx_mpi1_flg = PETSC_TRUE;
    PetscCall(MatSetUpMultiply_MPIAIJ(mat));
  }
  Mvctx = a->Mvctx_mpi1;
#endif
  Mvctx = a->Mvctx;
  PetscCall(VecScatterBegin(Mvctx, x, lvec, INSERT_VALUES, SCATTER_FORWARD));
  PetscCall(VecScatterEnd(Mvctx, x, lvec, INSERT_VALUES, SCATTER_FORWARD));

  PetscCall(VecScatterBegin(Mvctx, cmap, lcmap, INSERT_VALUES, SCATTER_FORWARD));
  PetscCall(VecScatterEnd(Mvctx, cmap, lcmap, INSERT_VALUES, SCATTER_FORWARD));

  /* (3) create sequential iscol_o (a subset of iscol) and isgarray */
  /* off-process column indices */
  count = 0;
  PetscInt *cmap1;
  PetscCall(PetscMalloc1(Bn, &idx));
  PetscCall(PetscMalloc1(Bn, &cmap1));

  PetscCall(VecGetArray(lvec, &xarray));
  PetscCall(VecGetArray(lcmap, &cmaparray));
  for (i = 0; i < Bn; i++) {
    if (PetscRealPart(xarray[i]) > -1.0) {
      idx[count]   = i;                                       /* local column index in off-diagonal part B */
      cmap1[count] = (PetscInt)(PetscRealPart(cmaparray[i])); /* column index in submat */
      count++;
    }
  }
  printf("[%d] Bn %d, count %d\n", rank, Bn, count);
  PetscCall(VecRestoreArray(lvec, &xarray));
  PetscCall(VecRestoreArray(lcmap, &cmaparray));
  if (count != 6) {
    printf("[%d] count %d != 6 lvec:\n", rank, count);
    PetscCall(VecView(lvec, 0));

    printf("[%d] count %d != 6 lcmap:\n", rank, count);
    PetscCall(VecView(lcmap, 0));
    SETERRQ(PETSC_COMM_SELF, PETSC_ERR_ARG_WRONGSTATE, "count %d != 6", count);
  }

  PetscCall(ISCreateGeneral(PETSC_COMM_SELF, count, idx, PETSC_COPY_VALUES, iscol_o));
  /* cannot ensure iscol_o has same blocksize as iscol! */

  PetscCall(PetscFree(idx));

  *garray = cmap1;

  PetscCall(VecDestroy(&x));
  PetscCall(VecDestroy(&cmap));
  PetscCall(VecDestroy(&lcmap));
  PetscFunctionReturn(PETSC_SUCCESS);
}

int main(int argc, char **args)
{
  Mat         C, A;
  PetscInt    i, j, m = 3, n = 2, rstart, rend;
  PetscMPIInt size, rank;
  PetscScalar v;
  IS          isrow, iscol;

  PetscFunctionBeginUser;
  PetscCall(PetscInitialize(&argc, &args, NULL, help));
  PetscCallMPI(MPI_Comm_rank(PETSC_COMM_WORLD, &rank));
  PetscCallMPI(MPI_Comm_size(PETSC_COMM_WORLD, &size));
  n = 2 * size;

  PetscCall(MatCreate(PETSC_COMM_WORLD, &C));
  PetscCall(MatSetSizes(C, PETSC_DECIDE, PETSC_DECIDE, m * n, m * n));
  PetscCall(MatSetFromOptions(C));
  PetscCall(MatSetUp(C));

  /*
        This is JUST to generate a nice test matrix, all processors fill up
    the entire matrix. This is not something one would ever do in practice.
  */
  PetscCall(MatGetOwnershipRange(C, &rstart, &rend));
  for (i = rstart; i < rend; i++) {
    for (j = 0; j < m * n; j++) {
      v = i + j + 1;
      PetscCall(MatSetValues(C, 1, &i, 1, &j, &v, INSERT_VALUES));
    }
  }

  PetscCall(MatAssemblyBegin(C, MAT_FINAL_ASSEMBLY));
  PetscCall(MatAssemblyEnd(C, MAT_FINAL_ASSEMBLY));

  /*
     Generate a new matrix consisting of every second row and column of
   the original matrix
  */
  PetscCall(MatGetOwnershipRange(C, &rstart, &rend));
  /* Create parallel IS with the rows we want on THIS processor */
  PetscCall(ISCreateStride(PETSC_COMM_WORLD, (rend - rstart) / 2, rstart, 2, &isrow));
  /* Create parallel IS with the rows we want on THIS processor (same as rows for now) */
  PetscCall(ISCreateStride(PETSC_COMM_WORLD, (rend - rstart) / 2, rstart, 2, &iscol));

  IS              iscol_d, isrow_d, iscol_o;
  const PetscInt *garray;
  PetscCall(ISGetSeqIS_SameColDist_Private(C, isrow, iscol, &isrow_d, &iscol_d, &iscol_o, &garray));

  PetscCall(ISDestroy(&isrow_d));
  PetscCall(ISDestroy(&iscol_d));
  PetscCall(ISDestroy(&iscol_o));
  PetscCall(PetscFree(garray));

  PetscCall(MatCreateSubMatrix(C, isrow, iscol, MAT_INITIAL_MATRIX, &A));
  PetscCall(MatCreateSubMatrix(C, isrow, iscol, MAT_REUSE_MATRIX, &A));

  PetscCall(ISDestroy(&isrow));
  PetscCall(ISDestroy(&iscol));
  PetscCall(MatDestroy(&A));
  PetscCall(MatDestroy(&C));
  PetscCall(PetscFinalize());
  return 0;
}