static char help[] = "Test memory scalability of MatMatMult() for AIJ and DENSE matrices. \n\ Modified from the code contributed by Ian Lin \n\n"; /* Example: mpiexec -n ./ex33 -mem_view -matmatmult_Bbn */ #include PetscErrorCode Print_memory(PetscLogDouble mem) { double max_mem,min_mem; PetscFunctionBeginUser; PetscCallMPI(MPI_Reduce(&mem, &max_mem, 1, MPI_DOUBLE, MPI_MAX, 0, MPI_COMM_WORLD)); PetscCallMPI(MPI_Reduce(&mem, &min_mem, 1, MPI_DOUBLE, MPI_MIN, 0, MPI_COMM_WORLD)); max_mem = max_mem / 1024.0 / 1024.0; min_mem = min_mem / 1024.0 / 1024.0; PetscCall(PetscPrintf(MPI_COMM_WORLD, " max and min memory across all processors %.4f Mb, %.4f Mb.\n", (double)max_mem,(double)min_mem)); PetscFunctionReturn(0); } /* Illustrate how to use MPI derived data types. It would save memory significantly. See MatMPIDenseScatter() */ PetscErrorCode TestMPIDerivedDataType() { MPI_Datatype type1, type2,rtype1,rtype2; PetscInt i,j; PetscScalar buffer[24]; /* An array of 4 rows, 6 cols */ MPI_Status status; PetscMPIInt rank,size,disp[2]; PetscFunctionBeginUser; PetscCallMPI(MPI_Comm_size(MPI_COMM_WORLD, &size)); PetscCheck(size >= 2,PETSC_COMM_SELF,PETSC_ERR_WRONG_MPI_SIZE,"Must use at least 2 processors"); PetscCallMPI(MPI_Comm_rank(MPI_COMM_WORLD, &rank)); if (rank == 0) { /* proc[0] sends 2 rows to proc[1] */ for (i=0; i<24; i++) buffer[i] = (PetscScalar)i; disp[0] = 0; disp[1] = 2; PetscCallMPI(MPI_Type_create_indexed_block(2, 1, (const PetscMPIInt *)disp, MPIU_SCALAR, &type1)); /* one column has 4 entries */ PetscCallMPI(MPI_Type_create_resized(type1,0,4*sizeof(PetscScalar),&type2)); PetscCallMPI(MPI_Type_commit(&type2)); PetscCallMPI(MPI_Send(buffer, 6, type2, 1, 123, MPI_COMM_WORLD)); } else if (rank == 1) { /* proc[1] receives 2 rows from proc[0], and put them into contiguous rows, starting at the row 1 (disp[0]) */ PetscInt blen = 2; for (i=0; i<24; i++) buffer[i] = 0.0; disp[0] = 1; PetscCallMPI(MPI_Type_create_indexed_block(1, blen, (const PetscMPIInt *)disp, MPIU_SCALAR, &rtype1)); PetscCallMPI(MPI_Type_create_resized(rtype1, 0, 4*sizeof(PetscScalar), &rtype2)); PetscCallMPI(MPI_Type_commit(&rtype2)); PetscCallMPI(MPI_Recv(buffer, 6, rtype2, 0, 123, MPI_COMM_WORLD, &status)); for (i=0; i<4; i++) { for (j=0; j<6; j++) { PetscCall(PetscPrintf(MPI_COMM_SELF," %g", (double)PetscRealPart(buffer[i+j*4]))); } PetscCall(PetscPrintf(MPI_COMM_SELF,"\n")); } } if (rank == 0) { PetscCallMPI(MPI_Type_free(&type1)); PetscCallMPI(MPI_Type_free(&type2)); } else if (rank == 1) { PetscCallMPI(MPI_Type_free(&rtype1)); PetscCallMPI(MPI_Type_free(&rtype2)); } PetscCallMPI(MPI_Barrier(MPI_COMM_WORLD)); PetscFunctionReturn(0); } int main(int argc, char **args) { PetscInt mA = 2700,nX = 80,nz = 40; /* PetscInt mA=6,nX=5,nz=2; //small test */ PetscLogDouble mem; Mat A,X,Y; PetscBool flg = PETSC_FALSE; PetscCall(PetscInitialize(&argc,&args,(char*)0,help)); PetscCall(PetscOptionsGetBool(NULL,NULL,"-test_mpiderivedtype",&flg,NULL)); if (flg) { PetscCall(TestMPIDerivedDataType()); PetscCall(PetscFinalize()); return 0; } PetscCall(PetscOptionsGetBool(NULL,NULL,"-mem_view",&flg,NULL)); PetscCall(PetscMemoryGetCurrentUsage(&mem)); if (flg) { PetscCall(PetscPrintf(MPI_COMM_WORLD, "Before start,")); PetscCall(Print_memory(mem)); } PetscCall(MatCreateAIJ(PETSC_COMM_WORLD,PETSC_DECIDE,PETSC_DECIDE,mA,mA,nz,PETSC_NULL,nz,PETSC_NULL,&A)); PetscCall(MatSetRandom(A,PETSC_NULL)); PetscCall(PetscMemoryGetCurrentUsage(&mem)); if (flg) { PetscCall(PetscPrintf(MPI_COMM_WORLD, "After creating A,")); PetscCall(Print_memory(mem)); } PetscCall(MatCreateDense(PETSC_COMM_WORLD,PETSC_DECIDE,PETSC_DECIDE,mA,nX,PETSC_NULL,&X)); PetscCall(MatSetRandom(X,PETSC_NULL)); PetscCall(PetscMemoryGetCurrentUsage(&mem)); if (flg) { PetscCall(PetscPrintf(MPI_COMM_WORLD, "After creating X,")); PetscCall(Print_memory(mem)); } PetscCall(MatMatMult(A,X,MAT_INITIAL_MATRIX,PETSC_DEFAULT,&Y)); PetscCall(PetscMemoryGetCurrentUsage(&mem)); if (flg) { PetscCall(PetscPrintf(MPI_COMM_WORLD, "After MatMatMult,")); PetscCall(Print_memory(mem)); } /* Test reuse */ PetscCall(MatMatMult(A,X,MAT_REUSE_MATRIX,PETSC_DEFAULT,&Y)); PetscCall(PetscMemoryGetCurrentUsage(&mem)); if (flg) { PetscCall(PetscPrintf(MPI_COMM_WORLD, "After reuse MatMatMult,")); PetscCall(Print_memory(mem)); } /* Check accuracy */ PetscCall(MatMatMultEqual(A,X,Y,10,&flg)); PetscCheck(flg,PETSC_COMM_SELF,PETSC_ERR_ARG_NOTSAMETYPE,"Error in MatMatMult()"); PetscCall(MatDestroy(&A)); PetscCall(MatDestroy(&X)); PetscCall(MatDestroy(&Y)); PetscCall(PetscFinalize()); return 0; } /*TEST test: suffix: 1 nsize: 4 output_file: output/ex33.out test: suffix: 2 nsize: 8 output_file: output/ex33.out test: suffix: 3 nsize: 2 args: -test_mpiderivedtype output_file: output/ex33_3.out TEST*/