#include #define NNORMS 6 static PetscErrorCode MatLoadComputeNorms(Mat data_mat, PetscViewer inp_viewer, PetscReal norms[]) { Mat corr_mat; PetscInt M, N; PetscFunctionBegin; PetscCall(MatLoad(data_mat, inp_viewer)); PetscCall(MatAssemblyBegin(data_mat, MAT_FINAL_ASSEMBLY)); PetscCall(MatAssemblyEnd(data_mat, MAT_FINAL_ASSEMBLY)); PetscCall(MatViewFromOptions(data_mat, NULL, "-view_mat")); PetscCall(MatGetSize(data_mat, &M, &N)); PetscCall(PetscPrintf(PETSC_COMM_WORLD, "Data matrix size: %" PetscInt_FMT " %" PetscInt_FMT "\n", M, N)); /* compute matrix norms */ PetscCall(MatNorm(data_mat, NORM_1, &norms[0])); PetscCall(MatNorm(data_mat, NORM_INFINITY, &norms[1])); PetscCall(MatNorm(data_mat, NORM_FROBENIUS, &norms[2])); PetscCall(PetscPrintf(PETSC_COMM_WORLD, "Data matrix norms: %g %g %g\n", (double)norms[0], (double)norms[1], (double)norms[2])); /* compute autocorrelation matrix */ PetscCall(MatMatTransposeMult(data_mat, data_mat, MAT_INITIAL_MATRIX, PETSC_DETERMINE, &corr_mat)); /* compute autocorrelation matrix norms */ PetscCall(MatNorm(corr_mat, NORM_1, &norms[3])); PetscCall(MatNorm(corr_mat, NORM_INFINITY, &norms[4])); PetscCall(MatNorm(corr_mat, NORM_FROBENIUS, &norms[5])); PetscCall(PetscPrintf(PETSC_COMM_WORLD, "Autocorrelation matrix norms: %g %g %g\n", (double)norms[3], (double)norms[4], (double)norms[5])); PetscCall(MatDestroy(&corr_mat)); PetscFunctionReturn(PETSC_SUCCESS); } static PetscErrorCode GetReader(MPI_Comm comm, const char option[], PetscViewer *r, PetscViewerFormat *fmt) { PetscBool flg; PetscFunctionBegin; PetscCall(PetscOptionsCreateViewer(PETSC_COMM_SELF, NULL, NULL, option, r, fmt, &flg)); if (flg) { PetscFileMode mode; PetscCall(PetscViewerFileGetMode(*r, &mode)); flg = (PetscBool)(mode == FILE_MODE_READ); } PetscCheck(flg, PETSC_COMM_WORLD, PETSC_ERR_USER_INPUT, "Need to specify %s viewer_type:file:format:read", option); PetscFunctionReturn(PETSC_SUCCESS); } int main(int argc, char **argv) { PetscInt i; PetscReal norms0[NNORMS], norms1[NNORMS]; PetscViewer inp_viewer; PetscViewerFormat fmt; Mat data_mat; char mat_name[PETSC_MAX_PATH_LEN] = "dmatrix"; PetscFunctionBeginUser; PetscCall(PetscInitialize(&argc, &argv, NULL, NULL)); PetscCall(PetscOptionsGetString(NULL, NULL, "-mat_name", mat_name, sizeof(mat_name), NULL)); /* load matrix sequentially */ PetscCall(MatCreate(PETSC_COMM_SELF, &data_mat)); PetscCall(MatSetType(data_mat, MATDENSE)); PetscCall(PetscObjectSetName((PetscObject)data_mat, mat_name)); PetscCall(GetReader(PETSC_COMM_SELF, "-serial_reader", &inp_viewer, &fmt)); PetscCall(PetscViewerPushFormat(inp_viewer, fmt)); PetscCall(MatLoadComputeNorms(data_mat, inp_viewer, norms0)); PetscCall(PetscViewerPopFormat(inp_viewer)); PetscCall(PetscViewerDestroy(&inp_viewer)); PetscCall(MatViewFromOptions(data_mat, NULL, "-view_serial_mat")); PetscCall(MatDestroy(&data_mat)); /* load matrix in parallel */ PetscCall(MatCreate(PETSC_COMM_WORLD, &data_mat)); PetscCall(MatSetType(data_mat, MATDENSE)); PetscCall(PetscObjectSetName((PetscObject)data_mat, mat_name)); PetscCall(GetReader(PETSC_COMM_WORLD, "-parallel_reader", &inp_viewer, &fmt)); PetscCall(PetscViewerPushFormat(inp_viewer, fmt)); PetscCall(MatLoadComputeNorms(data_mat, inp_viewer, norms1)); PetscCall(PetscViewerPopFormat(inp_viewer)); PetscCall(PetscViewerDestroy(&inp_viewer)); PetscCall(MatViewFromOptions(data_mat, NULL, "-view_parallel_mat")); PetscCall(MatDestroy(&data_mat)); for (i = 0; i < NNORMS; i++) PetscCheck(PetscAbs(norms0[i] - norms1[i]) <= PETSC_SMALL, PETSC_COMM_SELF, PETSC_ERR_PLIB, "norm0[%" PetscInt_FMT "] = %g != %g = norms1[%" PetscInt_FMT "]", i, (double)norms0[i], (double)norms1[i], i); PetscCall(PetscFinalize()); return 0; } /*TEST test: suffix: 1 requires: hdf5 datafilespath complex args: -serial_reader hdf5:${DATAFILESPATH}/matrices/hdf5/sample_data.h5::read -parallel_reader hdf5:${DATAFILESPATH}/matrices/hdf5/sample_data.h5::read nsize: {{1 2 4}} test: requires: hdf5 datafilespath args: -serial_reader hdf5:${DATAFILESPATH}/matrices/hdf5/tiny_rectangular_mat.h5::read -parallel_reader hdf5:${DATAFILESPATH}/matrices/hdf5/tiny_rectangular_mat.h5::read nsize: {{1 2}} test: suffix: 2-complex requires: complex args: -mat_name ComplexMat test: suffix: 2-real requires: !complex args: -mat_name RealMat TEST*/