#include #define NNORMS 6 static PetscErrorCode MatLoadComputeNorms(Mat data_mat, PetscViewer inp_viewer, PetscReal norms[]) { Mat corr_mat; PetscInt M,N; PetscErrorCode ierr; PetscFunctionBegin; ierr = MatLoad(data_mat, inp_viewer);CHKERRQ(ierr); ierr = MatAssemblyBegin(data_mat, MAT_FINAL_ASSEMBLY);CHKERRQ(ierr); ierr = MatAssemblyEnd(data_mat, MAT_FINAL_ASSEMBLY);CHKERRQ(ierr); ierr = MatViewFromOptions(data_mat, NULL, "-view_mat");CHKERRQ(ierr); ierr = MatGetSize(data_mat, &M, &N);CHKERRQ(ierr); ierr = PetscPrintf(PETSC_COMM_WORLD, "Data matrix size: %D %D\n", M,N);CHKERRQ(ierr); /* compute matrix norms */ ierr = MatNorm(data_mat, NORM_1, &norms[0]);CHKERRQ(ierr); ierr = MatNorm(data_mat, NORM_INFINITY, &norms[1]);CHKERRQ(ierr); ierr = MatNorm(data_mat, NORM_FROBENIUS, &norms[2]);CHKERRQ(ierr); ierr = PetscPrintf(PETSC_COMM_WORLD, "Data matrix norms: %g %g %g\n", (double)norms[0],(double)norms[1],(double)norms[2]);CHKERRQ(ierr); /* compute autocorrelation matrix */ ierr = MatMatTransposeMult(data_mat, data_mat, MAT_INITIAL_MATRIX, PETSC_DEFAULT, &corr_mat);CHKERRQ(ierr); /* compute autocorrelation matrix norms */ ierr = MatNorm(corr_mat, NORM_1, &norms[3]);CHKERRQ(ierr); ierr = MatNorm(corr_mat, NORM_INFINITY, &norms[4]);CHKERRQ(ierr); ierr = MatNorm(corr_mat, NORM_FROBENIUS, &norms[5]);CHKERRQ(ierr); ierr = PetscPrintf(PETSC_COMM_WORLD, "Autocorrelation matrix norms: %g %g %g\n", (double)norms[3],(double)norms[4],(double)norms[5]);CHKERRQ(ierr); ierr = MatDestroy(&corr_mat);CHKERRQ(ierr); PetscFunctionReturn(0); } static PetscErrorCode GetReader(MPI_Comm comm, const char option[], PetscViewer *r, PetscViewerFormat *fmt) { PetscBool flg; PetscErrorCode ierr; PetscFunctionBegin; ierr = PetscOptionsGetViewer(PETSC_COMM_SELF, NULL, NULL, option, r, fmt, &flg);CHKERRQ(ierr); if (flg) { PetscFileMode mode; ierr = PetscViewerFileGetMode(*r, &mode);CHKERRQ(ierr); flg = (PetscBool) (mode == FILE_MODE_READ); } if (!flg) SETERRQ1(PETSC_COMM_WORLD,PETSC_ERR_USER_INPUT,"Need to specify %s viewer_type:file:format:read", option); PetscFunctionReturn(0); } int main(int argc, char **argv) { PetscErrorCode ierr; PetscInt i; PetscReal norms0[NNORMS], norms1[NNORMS]; PetscViewer inp_viewer; PetscViewerFormat fmt; Mat data_mat; char mat_name[PETSC_MAX_PATH_LEN]="dmatrix"; ierr = PetscInitialize(&argc, &argv, NULL, NULL);if (ierr) return ierr; ierr = PetscOptionsGetString(NULL,NULL,"-mat_name",mat_name,sizeof(mat_name),NULL);CHKERRQ(ierr); /* load matrix sequentially */ ierr = MatCreate(PETSC_COMM_SELF, &data_mat);CHKERRQ(ierr); ierr = MatSetType(data_mat,MATDENSE);CHKERRQ(ierr); ierr = PetscObjectSetName((PetscObject)data_mat, mat_name);CHKERRQ(ierr); ierr = GetReader(PETSC_COMM_SELF, "-serial_reader", &inp_viewer, &fmt);CHKERRQ(ierr); ierr = PetscViewerPushFormat(inp_viewer, fmt);CHKERRQ(ierr); ierr = MatLoadComputeNorms(data_mat, inp_viewer, norms0);CHKERRQ(ierr); ierr = PetscViewerPopFormat(inp_viewer);CHKERRQ(ierr); ierr = PetscViewerDestroy(&inp_viewer);CHKERRQ(ierr); ierr = MatViewFromOptions(data_mat, NULL, "-view_serial_mat");CHKERRQ(ierr); ierr = MatDestroy(&data_mat);CHKERRQ(ierr); /* load matrix in parallel */ ierr = MatCreate(PETSC_COMM_WORLD, &data_mat);CHKERRQ(ierr); ierr = MatSetType(data_mat,MATDENSE);CHKERRQ(ierr); ierr = PetscObjectSetName((PetscObject)data_mat, mat_name);CHKERRQ(ierr); ierr = GetReader(PETSC_COMM_WORLD, "-parallel_reader", &inp_viewer, &fmt);CHKERRQ(ierr); ierr = PetscViewerPushFormat(inp_viewer, fmt);CHKERRQ(ierr); ierr = MatLoadComputeNorms(data_mat, inp_viewer, norms1);CHKERRQ(ierr); ierr = PetscViewerPopFormat(inp_viewer);CHKERRQ(ierr); ierr = PetscViewerDestroy(&inp_viewer);CHKERRQ(ierr); ierr = MatViewFromOptions(data_mat, NULL, "-view_parallel_mat");CHKERRQ(ierr); ierr = MatDestroy(&data_mat);CHKERRQ(ierr); for (i=0; i PETSC_SMALL) SETERRQ4(PETSC_COMM_SELF, PETSC_ERR_PLIB, "norm0[%D] = %g != %g = norms1[%D]", i, (double)norms0[i], (double)norms1[i], i); } ierr = PetscFinalize(); return ierr; } /*TEST test: suffix: 1 requires: hdf5 datafilespath complex args: -serial_reader hdf5:${DATAFILESPATH}/matrices/hdf5/sample_data.h5::read -parallel_reader hdf5:${DATAFILESPATH}/matrices/hdf5/sample_data.h5::read nsize: {{1 2 4}} test: requires: hdf5 datafilespath args: -serial_reader hdf5:${DATAFILESPATH}/matrices/hdf5/tiny_rectangular_mat.h5::read -parallel_reader hdf5:${DATAFILESPATH}/matrices/hdf5/tiny_rectangular_mat.h5::read nsize: {{1 2}} test: suffix: 2-complex requires: complex args: -mat_name ComplexMat test: suffix: 2-real requires: !complex args: -mat_name RealMat TEST*/