static char help[] = "Reads a PETSc matrix and vector from a file; expands the matrix with the vector\n\n"; /* Include "petscmat.h" so that we can use matrices. automatically includes: petscsys.h - base PETSc routines petscvec.h - vectors petscmat.h - matrices petscis.h - index sets petscviewer.h - viewers */ #include /* Adds a new column and row to the vector (the last) containing the vector */ PetscErrorCode PadMatrix(Mat A, Vec v, PetscScalar c, Mat *B) { PetscInt n, i, *cnt, *indices, nc; const PetscInt *aj; const PetscScalar *vv, *aa; PetscFunctionBegin; PetscCall(MatGetSize(A, &n, NULL)); PetscCall(VecGetArrayRead(v, &vv)); PetscCall(PetscMalloc1(n, &indices)); for (i = 0; i < n; i++) indices[i] = i; /* determine number of nonzeros per row in the new matrix */ PetscCall(PetscMalloc1(n + 1, &cnt)); for (i = 0; i < n; i++) { PetscCall(MatGetRow(A, i, &nc, NULL, NULL)); cnt[i] = nc + (vv[i] != 0.0); PetscCall(MatRestoreRow(A, i, &nc, NULL, NULL)); } cnt[n] = 1; for (i = 0; i < n; i++) cnt[n] += (vv[i] != 0.0); PetscCall(MatCreateSeqAIJ(PETSC_COMM_SELF, n + 1, n + 1, 0, cnt, B)); PetscCall(MatSetOption(*B, MAT_IGNORE_ZERO_ENTRIES, PETSC_TRUE)); /* copy over the matrix entries from the matrix and then the vector */ for (i = 0; i < n; i++) { PetscCall(MatGetRow(A, i, &nc, &aj, &aa)); PetscCall(MatSetValues(*B, 1, &i, nc, aj, aa, INSERT_VALUES)); PetscCall(MatRestoreRow(A, i, &nc, &aj, &aa)); } PetscCall(MatSetValues(*B, 1, &n, n, indices, vv, INSERT_VALUES)); PetscCall(MatSetValues(*B, n, indices, 1, &n, vv, INSERT_VALUES)); PetscCall(MatSetValues(*B, 1, &n, 1, &n, &c, INSERT_VALUES)); PetscCall(MatAssemblyBegin(*B, MAT_FINAL_ASSEMBLY)); PetscCall(MatAssemblyEnd(*B, MAT_FINAL_ASSEMBLY)); PetscCall(VecRestoreArrayRead(v, &vv)); PetscCall(PetscFree(cnt)); PetscCall(PetscFree(indices)); PetscFunctionReturn(PETSC_SUCCESS); } int main(int argc, char **args) { Mat A, B; PetscViewer fd; /* viewer */ char file[PETSC_MAX_PATH_LEN]; /* input file name */ PetscBool flg; Vec v; PetscFunctionBeginUser; PetscCall(PetscInitialize(&argc, &args, NULL, help)); /* Determine files from which we read the two linear systems (matrix and right-hand-side vector). */ PetscCall(PetscOptionsGetString(NULL, NULL, "-f0", file, sizeof(file), &flg)); PetscCheck(flg, PETSC_COMM_WORLD, PETSC_ERR_USER, "Must indicate binary file with the -f0 option"); PetscCall(PetscViewerBinaryOpen(PETSC_COMM_WORLD, file, FILE_MODE_READ, &fd)); PetscCall(MatCreate(PETSC_COMM_WORLD, &A)); PetscCall(MatSetType(A, MATSEQAIJ)); PetscCall(MatLoad(A, fd)); PetscCall(VecCreate(PETSC_COMM_WORLD, &v)); PetscCall(VecLoad(v, fd)); PetscCall(MatView(A, PETSC_VIEWER_STDOUT_SELF)); PetscCall(PadMatrix(A, v, 3.0, &B)); PetscCall(MatView(B, PETSC_VIEWER_STDOUT_SELF)); PetscCall(MatDestroy(&B)); PetscCall(MatDestroy(&A)); PetscCall(VecDestroy(&v)); PetscCall(PetscViewerDestroy(&fd)); PetscCall(PetscFinalize()); return 0; } /*TEST test: args: -f0 ${wPETSC_DIR}/share/petsc/datafiles/matrices/ns-real-int32-float64 requires: double !complex !defined(PETSC_USE_64BIT_INDICES) TEST*/