#include /*I "petscsnes.h" I*/ #include #undef __FUNCT__ #define __FUNCT__ "SNESMonitorSolution" /*@C SNESMonitorSolution - Monitors progress of the SNES solvers by calling VecView() for the approximate solution at each iteration. Collective on SNES Input Parameters: + snes - the SNES context . its - iteration number . fgnorm - 2-norm of residual - dummy - either a viewer or PETSC_NULL Level: intermediate .keywords: SNES, nonlinear, vector, monitor, view .seealso: SNESMonitorSet(), SNESMonitorDefault(), VecView() @*/ PetscErrorCode SNESMonitorSolution(SNES snes,PetscInt its,PetscReal fgnorm,void *dummy) { PetscErrorCode ierr; Vec x; PetscViewer viewer = (PetscViewer) dummy; PetscFunctionBegin; ierr = SNESGetSolution(snes,&x);CHKERRQ(ierr); if (!viewer) { MPI_Comm comm; ierr = PetscObjectGetComm((PetscObject)snes,&comm);CHKERRQ(ierr); viewer = PETSC_VIEWER_DRAW_(comm); } ierr = VecView(x,viewer);CHKERRQ(ierr); PetscFunctionReturn(0); } #undef __FUNCT__ #define __FUNCT__ "SNESMonitorResidual" /*@C SNESMonitorResidual - Monitors progress of the SNES solvers by calling VecView() for the residual at each iteration. Collective on SNES Input Parameters: + snes - the SNES context . its - iteration number . fgnorm - 2-norm of residual - dummy - either a viewer or PETSC_NULL Level: intermediate .keywords: SNES, nonlinear, vector, monitor, view .seealso: SNESMonitorSet(), SNESMonitorDefault(), VecView() @*/ PetscErrorCode SNESMonitorResidual(SNES snes,PetscInt its,PetscReal fgnorm,void *dummy) { PetscErrorCode ierr; Vec x; PetscViewer viewer = (PetscViewer) dummy; PetscFunctionBegin; ierr = SNESGetFunction(snes,&x,0,0);CHKERRQ(ierr); if (!viewer) { MPI_Comm comm; ierr = PetscObjectGetComm((PetscObject)snes,&comm);CHKERRQ(ierr); viewer = PETSC_VIEWER_DRAW_(comm); } ierr = VecView(x,viewer);CHKERRQ(ierr); PetscFunctionReturn(0); } #undef __FUNCT__ #define __FUNCT__ "SNESMonitorSolutionUpdate" /*@C SNESMonitorSolutionUpdate - Monitors progress of the SNES solvers by calling VecView() for the UPDATE to the solution at each iteration. Collective on SNES Input Parameters: + snes - the SNES context . its - iteration number . fgnorm - 2-norm of residual - dummy - either a viewer or PETSC_NULL Level: intermediate .keywords: SNES, nonlinear, vector, monitor, view .seealso: SNESMonitorSet(), SNESMonitorDefault(), VecView() @*/ PetscErrorCode SNESMonitorSolutionUpdate(SNES snes,PetscInt its,PetscReal fgnorm,void *dummy) { PetscErrorCode ierr; Vec x; PetscViewer viewer = (PetscViewer) dummy; PetscFunctionBegin; ierr = SNESGetSolutionUpdate(snes,&x);CHKERRQ(ierr); if (!viewer) { MPI_Comm comm; ierr = PetscObjectGetComm((PetscObject)snes,&comm);CHKERRQ(ierr); viewer = PETSC_VIEWER_DRAW_(comm); } ierr = VecView(x,viewer);CHKERRQ(ierr); PetscFunctionReturn(0); } #undef __FUNCT__ #define __FUNCT__ "SNESMonitorDefault" /*@C SNESMonitorDefault - Monitors progress of the SNES solvers (default). Collective on SNES Input Parameters: + snes - the SNES context . its - iteration number . fgnorm - 2-norm of residual - dummy - unused context Notes: This routine prints the residual norm at each iteration. Level: intermediate .keywords: SNES, nonlinear, default, monitor, norm .seealso: SNESMonitorSet(), SNESMonitorSolution() @*/ PetscErrorCode SNESMonitorDefault(SNES snes,PetscInt its,PetscReal fgnorm,void *dummy) { PetscErrorCode ierr; PetscViewer viewer = dummy ? (PetscViewer) dummy : PETSC_VIEWER_STDOUT_(((PetscObject)snes)->comm); PetscFunctionBegin; ierr = PetscViewerASCIIAddTab(viewer,((PetscObject)snes)->tablevel);CHKERRQ(ierr); ierr = PetscViewerASCIIPrintf(viewer,"%3D SNES Function norm %14.12e \n",its,(double)fgnorm);CHKERRQ(ierr); ierr = PetscViewerASCIISubtractTab(viewer,((PetscObject)snes)->tablevel);CHKERRQ(ierr); PetscFunctionReturn(0); } #undef __FUNCT__ #define __FUNCT__ "SNESMonitorJacUpdateSpectrum" PetscErrorCode SNESMonitorJacUpdateSpectrum(SNES snes,PetscInt it,PetscReal fnorm,void *ctx) { #if defined(PETSC_MISSING_LAPACK_GEEV) SETERRQ(((PetscObject)snes)->comm,PETSC_ERR_SUP,"GEEV - Lapack routine is unavailable\nNot able to provide eigen values."); #elif defined(PETSC_HAVE_ESSL) SETERRQ(((PetscObject)snes)->comm,PETSC_ERR_SUP,"GEEV - No support for ESSL Lapack Routines"); #else Vec X; Mat J,dJ,dJdense; PetscErrorCode ierr; PetscErrorCode (*func)(SNES,Vec,Mat*,Mat*,MatStructure*,void*); PetscInt n,i; PetscBLASInt nb,lwork; PetscReal *eigr,*eigi; MatStructure flg = DIFFERENT_NONZERO_PATTERN; PetscScalar *work; PetscScalar *a; PetscFunctionBegin; if (it == 0) PetscFunctionReturn(0); /* create the difference between the current update and the current jacobian */ ierr = SNESGetSolution(snes,&X);CHKERRQ(ierr); ierr = SNESGetJacobian(snes,&J,PETSC_NULL,&func,PETSC_NULL);CHKERRQ(ierr); ierr = MatDuplicate(J,MAT_COPY_VALUES,&dJ);CHKERRQ(ierr); ierr = SNESComputeJacobian(snes,X,&dJ,&dJ,&flg);CHKERRQ(ierr); ierr = MatAXPY(dJ,-1.0,J,SAME_NONZERO_PATTERN);CHKERRQ(ierr); /* compute the spectrum directly */ ierr = MatConvert(dJ,MATSEQDENSE,MAT_INITIAL_MATRIX,&dJdense);CHKERRQ(ierr); ierr = MatGetSize(dJ,&n,PETSC_NULL);CHKERRQ(ierr); ierr = PetscBLASIntCast(n,&nb);CHKERRQ(ierr); lwork = 3*nb; ierr = PetscMalloc(n*sizeof(PetscReal),&eigr);CHKERRQ(ierr); ierr = PetscMalloc(n*sizeof(PetscReal),&eigi);CHKERRQ(ierr); ierr = PetscMalloc(lwork*sizeof(PetscScalar),&work);CHKERRQ(ierr); ierr = MatDenseGetArray(dJdense,&a);CHKERRQ(ierr); #if !defined(PETSC_USE_COMPLEX) { PetscBLASInt lierr; ierr = PetscFPTrapPush(PETSC_FP_TRAP_OFF);CHKERRQ(ierr); LAPACKgeev_("N","N",&nb,a,&nb,eigr,eigi,PETSC_NULL,&nb,PETSC_NULL,&nb,work,&lwork,&lierr); if (lierr) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"geev() error %d",lierr); ierr = PetscFPTrapPop();CHKERRQ(ierr); } #else SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"Not coded for complex"); #endif PetscPrintf(((PetscObject)snes)->comm,"Eigenvalues of J_%d - J_%d:\n",it,it-1);CHKERRQ(ierr); for (i=0;icomm,"%5d: %20.5g + %20.5gi\n",i,eigr[i],eigi[i]);CHKERRQ(ierr); } ierr = MatDenseRestoreArray(dJdense,&a);CHKERRQ(ierr); ierr = MatDestroy(&dJ);CHKERRQ(ierr); ierr = MatDestroy(&dJdense);CHKERRQ(ierr); ierr = PetscFree(eigr);CHKERRQ(ierr); ierr = PetscFree(eigi);CHKERRQ(ierr); ierr = PetscFree(work);CHKERRQ(ierr); PetscFunctionReturn(0); #endif } #undef __FUNCT__ #define __FUNCT__ "SNESMonitorRange_Private" PetscErrorCode SNESMonitorRange_Private(SNES snes,PetscInt it,PetscReal *per) { PetscErrorCode ierr; Vec resid; PetscReal rmax,pwork; PetscInt i,n,N; PetscScalar *r; PetscFunctionBegin; ierr = SNESGetFunction(snes,&resid,0,0);CHKERRQ(ierr); ierr = VecNorm(resid,NORM_INFINITY,&rmax);CHKERRQ(ierr); ierr = VecGetLocalSize(resid,&n);CHKERRQ(ierr); ierr = VecGetSize(resid,&N);CHKERRQ(ierr); ierr = VecGetArray(resid,&r);CHKERRQ(ierr); pwork = 0.0; for (i=0; i .20*rmax); } ierr = MPI_Allreduce(&pwork,per,1,MPIU_REAL,MPIU_SUM,((PetscObject)snes)->comm);CHKERRQ(ierr); ierr = VecRestoreArray(resid,&r);CHKERRQ(ierr); *per = *per/N; PetscFunctionReturn(0); } #undef __FUNCT__ #define __FUNCT__ "SNESMonitorRange" /*@C SNESMonitorRange - Prints the percentage of residual elements that are more then 10 percent of the maximum value. Collective on SNES Input Parameters: + snes - iterative context . it - iteration number . rnorm - 2-norm (preconditioned) residual value (may be estimated). - dummy - unused monitor context Options Database Key: . -snes_monitor_range - Activates SNESMonitorRange() Level: intermediate .keywords: SNES, default, monitor, residual .seealso: SNESMonitorSet(), SNESMonitorDefault(), SNESMonitorLGCreate() @*/ PetscErrorCode SNESMonitorRange(SNES snes,PetscInt it,PetscReal rnorm,void *dummy) { PetscErrorCode ierr; PetscReal perc,rel; PetscViewer viewer = dummy ? (PetscViewer) dummy : PETSC_VIEWER_STDOUT_(((PetscObject)snes)->comm); /* should be in a MonitorRangeContext */ static PetscReal prev; PetscFunctionBegin; if (!it) prev = rnorm; ierr = SNESMonitorRange_Private(snes,it,&perc);CHKERRQ(ierr); rel = (prev - rnorm)/prev; prev = rnorm; ierr = PetscViewerASCIIAddTab(viewer,((PetscObject)snes)->tablevel);CHKERRQ(ierr); ierr = PetscViewerASCIIPrintf(viewer,"%3D SNES preconditioned resid norm %14.12e Percent values above 20 percent of maximum %5.2f relative decrease %5.2e ratio %5.2e \n",it,(double)rnorm,(double)100.0*perc,(double)rel,(double)rel/perc);CHKERRQ(ierr); ierr = PetscViewerASCIISubtractTab(viewer,((PetscObject)snes)->tablevel);CHKERRQ(ierr); PetscFunctionReturn(0); } typedef struct { PetscViewer viewer; PetscReal *history; } SNESMonitorRatioContext; #undef __FUNCT__ #define __FUNCT__ "SNESMonitorRatio" /*@C SNESMonitorRatio - Monitors progress of the SNES solvers by printing the ratio of residual norm at each iteration to the previous. Collective on SNES Input Parameters: + snes - the SNES context . its - iteration number . fgnorm - 2-norm of residual (or gradient) - dummy - context of monitor Level: intermediate .keywords: SNES, nonlinear, monitor, norm .seealso: SNESMonitorSet(), SNESMonitorSolution() @*/ PetscErrorCode SNESMonitorRatio(SNES snes,PetscInt its,PetscReal fgnorm,void *dummy) { PetscErrorCode ierr; PetscInt len; PetscReal *history; SNESMonitorRatioContext *ctx = (SNESMonitorRatioContext*)dummy; PetscFunctionBegin; ierr = SNESGetConvergenceHistory(snes,&history,PETSC_NULL,&len);CHKERRQ(ierr); ierr = PetscViewerASCIIAddTab(ctx->viewer,((PetscObject)snes)->tablevel);CHKERRQ(ierr); if (!its || !history || its > len) { ierr = PetscViewerASCIIPrintf(ctx->viewer,"%3D SNES Function norm %14.12e \n",its,(double)fgnorm);CHKERRQ(ierr); } else { PetscReal ratio = fgnorm/history[its-1]; ierr = PetscViewerASCIIPrintf(ctx->viewer,"%3D SNES Function norm %14.12e %14.12e \n",its,(double)fgnorm,(double)ratio);CHKERRQ(ierr); } ierr = PetscViewerASCIISubtractTab(ctx->viewer,((PetscObject)snes)->tablevel);CHKERRQ(ierr); PetscFunctionReturn(0); } /* If the we set the history monitor space then we must destroy it */ #undef __FUNCT__ #define __FUNCT__ "SNESMonitorRatioDestroy" PetscErrorCode SNESMonitorRatioDestroy(void **ct) { PetscErrorCode ierr; SNESMonitorRatioContext *ctx = *(SNESMonitorRatioContext**)ct; PetscFunctionBegin; ierr = PetscFree(ctx->history);CHKERRQ(ierr); ierr = PetscViewerDestroy(&ctx->viewer);CHKERRQ(ierr); ierr = PetscFree(ctx);CHKERRQ(ierr); PetscFunctionReturn(0); } #undef __FUNCT__ #define __FUNCT__ "SNESMonitorSetRatio" /*@C SNESMonitorSetRatio - Sets SNES to use a monitor that prints the ratio of the function norm at each iteration. Collective on SNES Input Parameters: + snes - the SNES context - viewer - ASCII viewer to print output Level: intermediate .keywords: SNES, nonlinear, monitor, norm .seealso: SNESMonitorSet(), SNESMonitorSolution(), SNESMonitorDefault() @*/ PetscErrorCode SNESMonitorSetRatio(SNES snes,PetscViewer viewer) { PetscErrorCode ierr; SNESMonitorRatioContext *ctx; PetscReal *history; PetscFunctionBegin; if (!viewer) { ierr = PetscViewerASCIIOpen(((PetscObject)snes)->comm,"stdout",&viewer);CHKERRQ(ierr); ierr = PetscObjectReference((PetscObject)viewer);CHKERRQ(ierr); } ierr = PetscNewLog(snes,SNESMonitorRatioContext,&ctx);CHKERRQ(ierr); ierr = SNESGetConvergenceHistory(snes,&history,PETSC_NULL,PETSC_NULL);CHKERRQ(ierr); if (!history) { ierr = PetscMalloc(100*sizeof(PetscReal),&ctx->history);CHKERRQ(ierr); ierr = SNESSetConvergenceHistory(snes,ctx->history,0,100,PETSC_TRUE);CHKERRQ(ierr); } ctx->viewer = viewer; ierr = SNESMonitorSet(snes,SNESMonitorRatio,ctx,SNESMonitorRatioDestroy);CHKERRQ(ierr); PetscFunctionReturn(0); } /* ---------------------------------------------------------------- */ #undef __FUNCT__ #define __FUNCT__ "SNESMonitorDefaultShort" /* Default (short) SNES Monitor, same as SNESMonitorDefault() except it prints fewer digits of the residual as the residual gets smaller. This is because the later digits are meaningless and are often different on different machines; by using this routine different machines will usually generate the same output. */ PetscErrorCode SNESMonitorDefaultShort(SNES snes,PetscInt its,PetscReal fgnorm,void *dummy) { PetscErrorCode ierr; PetscViewer viewer = dummy ? (PetscViewer) dummy : PETSC_VIEWER_STDOUT_(((PetscObject)snes)->comm); PetscFunctionBegin; ierr = PetscViewerASCIIAddTab(viewer,((PetscObject)snes)->tablevel);CHKERRQ(ierr); if (fgnorm > 1.e-9) { ierr = PetscViewerASCIIPrintf(viewer,"%3D SNES Function norm %G \n",its,fgnorm);CHKERRQ(ierr); } else if (fgnorm > 1.e-11) { ierr = PetscViewerASCIIPrintf(viewer,"%3D SNES Function norm %5.3e \n",its,fgnorm);CHKERRQ(ierr); } else { ierr = PetscViewerASCIIPrintf(viewer,"%3D SNES Function norm < 1.e-11\n",its);CHKERRQ(ierr); } ierr = PetscViewerASCIISubtractTab(viewer,((PetscObject)snes)->tablevel);CHKERRQ(ierr); PetscFunctionReturn(0); } /* ---------------------------------------------------------------- */ #undef __FUNCT__ #define __FUNCT__ "SNESDefaultConverged" /*@C SNESDefaultConverged - Convergence test of the solvers for systems of nonlinear equations (default). Collective on SNES Input Parameters: + snes - the SNES context . it - the iteration (0 indicates before any Newton steps) . xnorm - 2-norm of current iterate . snorm - 2-norm of current step . fnorm - 2-norm of function at current iterate - dummy - unused context Output Parameter: . reason - one of $ SNES_CONVERGED_FNORM_ABS - (fnorm < abstol), $ SNES_CONVERGED_SNORM_RELATIVE - (snorm < stol*xnorm), $ SNES_CONVERGED_FNORM_RELATIVE - (fnorm < rtol*fnorm0), $ SNES_DIVERGED_FUNCTION_COUNT - (nfct > maxf), $ SNES_DIVERGED_FNORM_NAN - (fnorm == NaN), $ SNES_CONVERGED_ITERATING - (otherwise), where + maxf - maximum number of function evaluations, set with SNESSetTolerances() . nfct - number of function evaluations, . abstol - absolute function norm tolerance, set with SNESSetTolerances() - rtol - relative function norm tolerance, set with SNESSetTolerances() Level: intermediate .keywords: SNES, nonlinear, default, converged, convergence .seealso: SNESSetConvergenceTest() @*/ PetscErrorCode SNESDefaultConverged(SNES snes,PetscInt it,PetscReal xnorm,PetscReal snorm,PetscReal fnorm,SNESConvergedReason *reason,void *dummy) { PetscErrorCode ierr; PetscFunctionBegin; PetscValidHeaderSpecific(snes,SNES_CLASSID,1); PetscValidPointer(reason,6); *reason = SNES_CONVERGED_ITERATING; if (!it) { /* set parameter for default relative tolerance convergence test */ snes->ttol = fnorm*snes->rtol; } if (PetscIsInfOrNanReal(fnorm)) { ierr = PetscInfo(snes,"Failed to converged, function norm is NaN\n");CHKERRQ(ierr); *reason = SNES_DIVERGED_FNORM_NAN; } else if (fnorm < snes->abstol) { ierr = PetscInfo2(snes,"Converged due to function norm %14.12e < %14.12e\n",(double)fnorm,(double)snes->abstol);CHKERRQ(ierr); *reason = SNES_CONVERGED_FNORM_ABS; } else if (snes->nfuncs >= snes->max_funcs) { ierr = PetscInfo2(snes,"Exceeded maximum number of function evaluations: %D > %D\n",snes->nfuncs,snes->max_funcs);CHKERRQ(ierr); *reason = SNES_DIVERGED_FUNCTION_COUNT; } if (it && !*reason) { if (fnorm <= snes->ttol) { ierr = PetscInfo2(snes,"Converged due to function norm %14.12e < %14.12e (relative tolerance)\n",(double)fnorm,(double)snes->ttol);CHKERRQ(ierr); *reason = SNES_CONVERGED_FNORM_RELATIVE; } else if (snorm < snes->stol*xnorm) { ierr = PetscInfo3(snes,"Converged due to small update length: %14.12e < %14.12e * %14.12e\n",(double)snorm,(double)snes->stol,(double)xnorm);CHKERRQ(ierr); *reason = SNES_CONVERGED_SNORM_RELATIVE; } } PetscFunctionReturn(0); } #undef __FUNCT__ #define __FUNCT__ "SNESSkipConverged" /*@C SNESSkipConverged - Convergence test for SNES that NEVER returns as converged, UNLESS the maximum number of iteration have been reached. Logically Collective on SNES Input Parameters: + snes - the SNES context . it - the iteration (0 indicates before any Newton steps) . xnorm - 2-norm of current iterate . snorm - 2-norm of current step . fnorm - 2-norm of function at current iterate - dummy - unused context Output Parameter: . reason - SNES_CONVERGED_ITERATING, SNES_CONVERGED_ITS, or SNES_DIVERGED_FNORM_NAN Notes: Convergence is then declared after a fixed number of iterations have been used. Level: advanced .keywords: SNES, nonlinear, skip, converged, convergence .seealso: SNESSetConvergenceTest() @*/ PetscErrorCode SNESSkipConverged(SNES snes,PetscInt it,PetscReal xnorm,PetscReal snorm,PetscReal fnorm,SNESConvergedReason *reason,void *dummy) { PetscErrorCode ierr; PetscFunctionBegin; PetscValidHeaderSpecific(snes,SNES_CLASSID,1); PetscValidPointer(reason,6); *reason = SNES_CONVERGED_ITERATING; if (fnorm != fnorm) { ierr = PetscInfo(snes,"Failed to converged, function norm is NaN\n");CHKERRQ(ierr); *reason = SNES_DIVERGED_FNORM_NAN; } else if (it == snes->max_its) { *reason = SNES_CONVERGED_ITS; } PetscFunctionReturn(0); } #undef __FUNCT__ #define __FUNCT__ "SNESDefaultGetWork" /*@ SNESDefaultGetWork - Gets a number of work vectors. Input Parameters: . snes - the SNES context . nw - number of work vectors to allocate Level: developer Notes: Call this only if no work vectors have been allocated @*/ PetscErrorCode SNESDefaultGetWork(SNES snes,PetscInt nw) { PetscErrorCode ierr; PetscFunctionBegin; if (snes->work) {ierr = VecDestroyVecs(snes->nwork,&snes->work);CHKERRQ(ierr);} snes->nwork = nw; ierr = VecDuplicateVecs(snes->vec_sol,snes->nwork,&snes->work);CHKERRQ(ierr); ierr = PetscLogObjectParents(snes,nw,snes->work);CHKERRQ(ierr); PetscFunctionReturn(0); }