#include <../src/sys/classes/viewer/impls/vtk/vtkvimpl.h> /*I "petscviewer.h" I*/ /*MC PetscViewerVTKWriteFunction - functional form used to provide writer to the PetscViewerVTK Synopsis: #include PetscViewerVTKWriteFunction(PetscObject object,PetscViewer viewer) Input Parameters: + object - the PETSc object to be written - viewer - viewer it is to be written to Level: developer .seealso: `PetscViewerVTKAddField()` M*/ /*@C PetscViewerVTKAddField - Add a field to the viewer Collective Input Parameters: + viewer - VTK viewer . dm - DM on which Vec lives . PetscViewerVTKWriteFunction - function to write this Vec . fieldnum - which field of the DM to write (PETSC_DEFAULT if the whle vector should be written) . fieldtype - Either PETSC_VTK_POINT_FIELD or PETSC_VTK_CELL_FIELD . checkdm - whether to check for identical dm arguments as fields are added - vec - Vec from which to write Note: This routine keeps exclusive ownership of the Vec. The caller should not use or destroy the Vec after adding it. Level: developer .seealso: `PetscViewerVTKOpen()`, `DMDAVTKWriteAll()`, `PetscViewerVTKWriteFunction`, `PetscViewerVTKGetDM()` @*/ PetscErrorCode PetscViewerVTKAddField(PetscViewer viewer,PetscObject dm,PetscErrorCode (*PetscViewerVTKWriteFunction)(PetscObject,PetscViewer),PetscInt fieldnum,PetscViewerVTKFieldType fieldtype,PetscBool checkdm,PetscObject vec) { PetscFunctionBegin; PetscValidHeaderSpecific(viewer,PETSC_VIEWER_CLASSID,1); PetscValidHeader(dm,2); PetscValidHeader(vec,7); PetscUseMethod(viewer,"PetscViewerVTKAddField_C",(PetscViewer,PetscObject,PetscErrorCode (*)(PetscObject,PetscViewer),PetscInt,PetscViewerVTKFieldType,PetscBool,PetscObject),(viewer,dm,PetscViewerVTKWriteFunction,fieldnum,fieldtype,checkdm,vec)); PetscFunctionReturn(0); } /*@C PetscViewerVTKGetDM - get the DM associated with the viewer Collective Input Parameters: + viewer - VTK viewer - dm - DM associated with the viewer (as PetscObject) Level: developer .seealso: `PetscViewerVTKOpen()`, `DMDAVTKWriteAll()`, `PetscViewerVTKWriteFunction`, `PetscViewerVTKAddField()` @*/ PetscErrorCode PetscViewerVTKGetDM(PetscViewer viewer,PetscObject *dm) { PetscFunctionBegin; PetscValidHeaderSpecific(viewer,PETSC_VIEWER_CLASSID,1); PetscUseMethod(viewer,"PetscViewerVTKGetDM_C",(PetscViewer,PetscObject*),(viewer,dm)); PetscFunctionReturn(0); } static PetscErrorCode PetscViewerDestroy_VTK(PetscViewer viewer) { PetscViewer_VTK *vtk = (PetscViewer_VTK*)viewer->data; PetscFunctionBegin; PetscCall(PetscFree(vtk->filename)); PetscCall(PetscFree(vtk)); PetscCall(PetscObjectComposeFunction((PetscObject)viewer,"PetscViewerFileSetName_C",NULL)); PetscCall(PetscObjectComposeFunction((PetscObject)viewer,"PetscViewerFileGetName_C",NULL)); PetscCall(PetscObjectComposeFunction((PetscObject)viewer,"PetscViewerFileSetMode_C",NULL)); PetscCall(PetscObjectComposeFunction((PetscObject)viewer,"PetscViewerFileGetMode_C",NULL)); PetscCall(PetscObjectComposeFunction((PetscObject)viewer,"PetscViewerVTKAddField_C",NULL)); PetscCall(PetscObjectComposeFunction((PetscObject)viewer,"PetscViewerVTKGetDM_C",NULL)); PetscFunctionReturn(0); } static PetscErrorCode PetscViewerFlush_VTK(PetscViewer viewer) { PetscViewer_VTK *vtk = (PetscViewer_VTK*)viewer->data; PetscViewerVTKObjectLink link,next; PetscFunctionBegin; PetscCheck(!vtk->link || !(!vtk->dm || !vtk->write),PetscObjectComm((PetscObject)viewer),PETSC_ERR_ARG_WRONGSTATE,"No fields or no grid"); if (vtk->write) PetscCall((*vtk->write)(vtk->dm,viewer)); for (link=vtk->link; link; link=next) { next = link->next; PetscCall(PetscObjectDestroy(&link->vec)); PetscCall(PetscFree(link)); } PetscCall(PetscObjectDestroy(&vtk->dm)); vtk->write = NULL; vtk->link = NULL; PetscFunctionReturn(0); } PetscErrorCode PetscViewerFileSetName_VTK(PetscViewer viewer,const char name[]) { PetscViewer_VTK *vtk = (PetscViewer_VTK*)viewer->data; PetscBool isvtk,isvts,isvtu,isvtr; size_t len; PetscFunctionBegin; PetscCall(PetscViewerFlush(viewer)); PetscCall(PetscFree(vtk->filename)); PetscCall(PetscStrlen(name,&len)); if (!len) { isvtk = PETSC_TRUE; } else { PetscCall(PetscStrcasecmp(name+len-4,".vtk",&isvtk)); PetscCall(PetscStrcasecmp(name+len-4,".vts",&isvts)); PetscCall(PetscStrcasecmp(name+len-4,".vtu",&isvtu)); PetscCall(PetscStrcasecmp(name+len-4,".vtr",&isvtr)); } if (isvtk) { if (viewer->format == PETSC_VIEWER_DEFAULT) viewer->format = PETSC_VIEWER_ASCII_VTK_DEPRECATED; PetscCheck(viewer->format == PETSC_VIEWER_ASCII_VTK_DEPRECATED,PetscObjectComm((PetscObject)viewer),PETSC_ERR_ARG_INCOMP,"Cannot use file '%s' with format %s, should have '.vtk' extension",name,PetscViewerFormats[viewer->format]); } else if (isvts) { if (viewer->format == PETSC_VIEWER_DEFAULT) viewer->format = PETSC_VIEWER_VTK_VTS; PetscCheck(viewer->format == PETSC_VIEWER_VTK_VTS,PetscObjectComm((PetscObject)viewer),PETSC_ERR_ARG_INCOMP,"Cannot use file '%s' with format %s, should have '.vts' extension",name,PetscViewerFormats[viewer->format]); } else if (isvtu) { if (viewer->format == PETSC_VIEWER_DEFAULT) viewer->format = PETSC_VIEWER_VTK_VTU; PetscCheck(viewer->format == PETSC_VIEWER_VTK_VTU,PetscObjectComm((PetscObject)viewer),PETSC_ERR_ARG_INCOMP,"Cannot use file '%s' with format %s, should have '.vtu' extension",name,PetscViewerFormats[viewer->format]); } else if (isvtr) { if (viewer->format == PETSC_VIEWER_DEFAULT) viewer->format = PETSC_VIEWER_VTK_VTR; PetscCheck(viewer->format == PETSC_VIEWER_VTK_VTR,PetscObjectComm((PetscObject)viewer),PETSC_ERR_ARG_INCOMP,"Cannot use file '%s' with format %s, should have '.vtr' extension",name,PetscViewerFormats[viewer->format]); } else SETERRQ(PetscObjectComm((PetscObject)viewer),PETSC_ERR_ARG_UNKNOWN_TYPE,"File '%s' has unrecognized extension",name); PetscCall(PetscStrallocpy(len ? name : "stdout",&vtk->filename)); PetscFunctionReturn(0); } PetscErrorCode PetscViewerFileGetName_VTK(PetscViewer viewer,const char **name) { PetscViewer_VTK *vtk = (PetscViewer_VTK*)viewer->data; PetscFunctionBegin; *name = vtk->filename; PetscFunctionReturn(0); } PetscErrorCode PetscViewerFileSetMode_VTK(PetscViewer viewer,PetscFileMode type) { PetscViewer_VTK *vtk = (PetscViewer_VTK*)viewer->data; PetscFunctionBegin; vtk->btype = type; PetscFunctionReturn(0); } PetscErrorCode PetscViewerFileGetMode_VTK(PetscViewer viewer,PetscFileMode *type) { PetscViewer_VTK *vtk = (PetscViewer_VTK*)viewer->data; PetscFunctionBegin; *type = vtk->btype; PetscFunctionReturn(0); } PetscErrorCode PetscViewerVTKAddField_VTK(PetscViewer viewer,PetscObject dm,PetscErrorCode (*PetscViewerVTKWriteFunction)(PetscObject,PetscViewer),PetscInt fieldnum,PetscViewerVTKFieldType fieldtype,PetscBool checkdm,PetscObject vec) { PetscViewer_VTK *vtk = (PetscViewer_VTK*)viewer->data; PetscViewerVTKObjectLink link, tail = vtk->link; PetscFunctionBegin; if (vtk->dm) { PetscCheck(!checkdm || dm == vtk->dm,PetscObjectComm((PetscObject)viewer),PETSC_ERR_ARG_INCOMP,"Refusing to write a field from more than one grid to the same VTK file. Set checkdm = PETSC_FALSE to skip this check."); } else { PetscCall(PetscObjectReference(dm)); vtk->dm = dm; } vtk->write = PetscViewerVTKWriteFunction; PetscCall(PetscNew(&link)); link->ft = fieldtype; link->vec = vec; link->field = fieldnum; link->next = NULL; /* Append to list */ if (tail) { while (tail->next) tail = tail->next; tail->next = link; } else vtk->link = link; PetscFunctionReturn(0); } PetscErrorCode PetscViewerVTKGetDM_VTK(PetscViewer viewer,PetscObject *dm) { PetscViewer_VTK *vtk = (PetscViewer_VTK*)viewer->data; PetscFunctionBegin; *dm = vtk->dm; PetscFunctionReturn(0); } /*MC PETSCVIEWERVTK - A viewer that writes to a VTK file .seealso: `PetscViewerVTKOpen()`, `PetscViewerHDF5Open()`, `PetscViewerStringSPrintf()`, `PetscViewerSocketOpen()`, `PetscViewerDrawOpen()`, `PETSCVIEWERSOCKET`, `PetscViewerCreate()`, `PetscViewerASCIIOpen()`, `PetscViewerBinaryOpen()`, `PETSCVIEWERBINARY`, `PETSCVIEWERDRAW`, `PETSCVIEWERSTRING`, `PetscViewerMatlabOpen()`, `VecView()`, `DMView()`, `PetscViewerMatlabPutArray()`, `PETSCVIEWERASCII`, `PETSCVIEWERMATLAB`, `PetscViewerFileSetName()`, `PetscViewerFileSetMode()`, `PetscViewerFormat`, `PetscViewerType`, `PetscViewerSetType()` Level: beginner M*/ PETSC_EXTERN PetscErrorCode PetscViewerCreate_VTK(PetscViewer v) { PetscViewer_VTK *vtk; PetscFunctionBegin; PetscCall(PetscNewLog(v,&vtk)); v->data = (void*)vtk; v->ops->destroy = PetscViewerDestroy_VTK; v->ops->flush = PetscViewerFlush_VTK; vtk->btype = FILE_MODE_UNDEFINED; vtk->filename = NULL; PetscCall(PetscObjectComposeFunction((PetscObject)v,"PetscViewerFileSetName_C",PetscViewerFileSetName_VTK)); PetscCall(PetscObjectComposeFunction((PetscObject)v,"PetscViewerFileGetName_C",PetscViewerFileGetName_VTK)); PetscCall(PetscObjectComposeFunction((PetscObject)v,"PetscViewerFileSetMode_C",PetscViewerFileSetMode_VTK)); PetscCall(PetscObjectComposeFunction((PetscObject)v,"PetscViewerFileGetMode_C",PetscViewerFileGetMode_VTK)); PetscCall(PetscObjectComposeFunction((PetscObject)v,"PetscViewerVTKAddField_C",PetscViewerVTKAddField_VTK)); PetscCall(PetscObjectComposeFunction((PetscObject)v,"PetscViewerVTKGetDM_C",PetscViewerVTKGetDM_VTK)); PetscFunctionReturn(0); } /*@C PetscViewerVTKOpen - Opens a file for VTK output. Collective Input Parameters: + comm - MPI communicator . name - name of file - type - type of file $ FILE_MODE_WRITE - create new file for binary output $ FILE_MODE_READ - open existing file for binary input (not currently supported) $ FILE_MODE_APPEND - open existing file for binary output (not currently supported) Output Parameter: . vtk - PetscViewer for VTK input/output to use with the specified file Level: beginner Note: This PetscViewer should be destroyed with PetscViewerDestroy(). .seealso: `PetscViewerASCIIOpen()`, `PetscViewerPushFormat()`, `PetscViewerDestroy()`, `VecView()`, `MatView()`, `VecLoad()`, `MatLoad()`, `PetscFileMode`, `PetscViewer` @*/ PetscErrorCode PetscViewerVTKOpen(MPI_Comm comm,const char name[],PetscFileMode type,PetscViewer *vtk) { PetscFunctionBegin; PetscCall(PetscViewerCreate(comm,vtk)); PetscCall(PetscViewerSetType(*vtk,PETSCVIEWERVTK)); PetscCall(PetscViewerFileSetMode(*vtk,type)); PetscCall(PetscViewerFileSetName(*vtk,name)); PetscFunctionReturn(0); } /*@C PetscViewerVTKFWrite - write binary data preceded by 32-bit int length (in bytes), does not do byte swapping. Logically collective on PetscViewer Input Parameters: + viewer - logically collective viewer, data written from rank 0 . fp - file pointer valid on rank 0 . data - data pointer valid on rank 0 . n - number of data items - dtype - data type Level: developer Notes: If PetscScalar is __float128 then the binary files are written in double precision .seealso: `DMDAVTKWriteAll()`, `DMPlexVTKWriteAll()`, `PetscViewerPushFormat()`, `PetscViewerVTKOpen()`, `PetscBinaryWrite()` @*/ PetscErrorCode PetscViewerVTKFWrite(PetscViewer viewer,FILE *fp,const void *data,PetscInt n,MPI_Datatype dtype) { PetscMPIInt rank; MPI_Datatype vdtype=dtype; #if defined(PETSC_USE_REAL___FLOAT128) double *tmp; PetscInt i; PetscReal *ttmp = (PetscReal*)data; #endif PetscFunctionBegin; PetscCheck(n >= 0,PetscObjectComm((PetscObject)viewer),PETSC_ERR_ARG_OUTOFRANGE,"Trying to write a negative amount of data %" PetscInt_FMT,n); if (!n) PetscFunctionReturn(0); PetscCallMPI(MPI_Comm_rank(PetscObjectComm((PetscObject)viewer),&rank)); if (rank == 0) { size_t count; PetscMPIInt dsize; PetscVTKInt bytes; #if defined(PETSC_USE_REAL___FLOAT128) if (dtype == MPIU___FLOAT128) { PetscCall(PetscMalloc1(n,&tmp)); for (i=0; i