#include <../src/vec/is/sf/impls/basic/allgatherv/sfallgatherv.h> /* Reuse the type. The difference is some fields (i.e., displs, recvcounts) are not used in Allgather on rank != 0, which is not a big deal */ typedef PetscSF_Allgatherv PetscSF_Allgather; PetscErrorCode PetscSFSetUp_Allgather(PetscSF sf) { PetscInt i; PetscSF_Allgather *dat = (PetscSF_Allgather *)sf->data; PetscFunctionBegin; for (i = PETSCSF_LOCAL; i <= PETSCSF_REMOTE; i++) { sf->leafbuflen[i] = 0; sf->leafstart[i] = 0; sf->leafcontig[i] = PETSC_TRUE; sf->leafdups[i] = PETSC_FALSE; dat->rootbuflen[i] = 0; dat->rootstart[i] = 0; dat->rootcontig[i] = PETSC_TRUE; dat->rootdups[i] = PETSC_FALSE; } sf->leafbuflen[PETSCSF_REMOTE] = sf->nleaves; dat->rootbuflen[PETSCSF_REMOTE] = sf->nroots; sf->persistent = PETSC_FALSE; sf->nleafreqs = 0; /* MPI collectives only need one request. We treat it as a root request. */ dat->nrootreqs = 1; PetscFunctionReturn(PETSC_SUCCESS); } static PetscErrorCode PetscSFBcastBegin_Allgather(PetscSF sf, MPI_Datatype unit, PetscMemType rootmtype, const void *rootdata, PetscMemType leafmtype, void *leafdata, MPI_Op op) { PetscSFLink link; PetscMPIInt sendcount; MPI_Comm comm; void *rootbuf = NULL, *leafbuf = NULL; /* buffer seen by MPI */ MPI_Request *req = NULL; PetscFunctionBegin; PetscCall(PetscSFLinkCreate(sf, unit, rootmtype, rootdata, leafmtype, leafdata, op, PETSCSF_BCAST, &link)); PetscCall(PetscSFLinkPackRootData(sf, link, PETSCSF_REMOTE, rootdata)); PetscCall(PetscSFLinkCopyRootBufferInCaseNotUseGpuAwareMPI(sf, link, PETSC_TRUE /* device2host before sending */)); PetscCall(PetscObjectGetComm((PetscObject)sf, &comm)); PetscCall(PetscMPIIntCast(sf->nroots, &sendcount)); PetscCall(PetscSFLinkGetMPIBuffersAndRequests(sf, link, PETSCSF_ROOT2LEAF, &rootbuf, &leafbuf, &req, NULL)); PetscCall(PetscSFLinkSyncStreamBeforeCallMPI(sf, link)); PetscCallMPI(MPIU_Iallgather(rootbuf, sendcount, unit, leafbuf, sendcount, unit, comm, req)); PetscFunctionReturn(PETSC_SUCCESS); } static PetscErrorCode PetscSFReduceBegin_Allgather(PetscSF sf, MPI_Datatype unit, PetscMemType leafmtype, const void *leafdata, PetscMemType rootmtype, void *rootdata, MPI_Op op) { PetscSFLink link; PetscInt rstart; MPI_Comm comm; PetscMPIInt rank, count, recvcount; void *rootbuf = NULL, *leafbuf = NULL; /* buffer seen by MPI */ PetscSF_Allgather *dat = (PetscSF_Allgather *)sf->data; MPI_Request *req = NULL; PetscFunctionBegin; PetscCall(PetscSFLinkCreate(sf, unit, rootmtype, rootdata, leafmtype, leafdata, op, PETSCSF_REDUCE, &link)); if (op == MPI_REPLACE) { /* REPLACE is only meaningful when all processes have the same leafdata to reduce. Therefore copy from local leafdata is fine */ PetscCall(PetscLayoutGetRange(sf->map, &rstart, NULL)); PetscCall((*link->Memcpy)(link, rootmtype, rootdata, leafmtype, (const char *)leafdata + (size_t)rstart * link->unitbytes, (size_t)sf->nroots * link->unitbytes)); if (PetscMemTypeDevice(leafmtype) && PetscMemTypeHost(rootmtype)) PetscCall((*link->SyncStream)(link)); /* Sync the device to host memcpy */ } else { PetscCall(PetscObjectGetComm((PetscObject)sf, &comm)); PetscCallMPI(MPI_Comm_rank(comm, &rank)); PetscCall(PetscSFLinkPackLeafData(sf, link, PETSCSF_REMOTE, leafdata)); PetscCall(PetscSFLinkCopyLeafBufferInCaseNotUseGpuAwareMPI(sf, link, PETSC_TRUE /* device2host before sending */)); PetscCall(PetscSFLinkGetMPIBuffersAndRequests(sf, link, PETSCSF_LEAF2ROOT, &rootbuf, &leafbuf, &req, NULL)); PetscCall(PetscMPIIntCast(dat->rootbuflen[PETSCSF_REMOTE], &recvcount)); if (rank == 0 && !link->leafbuf_alloc[PETSCSF_REMOTE][link->leafmtype_mpi]) PetscCall(PetscSFMalloc(sf, link->leafmtype_mpi, sf->leafbuflen[PETSCSF_REMOTE] * link->unitbytes, (void **)&link->leafbuf_alloc[PETSCSF_REMOTE][link->leafmtype_mpi])); if (rank == 0 && link->leafbuf_alloc[PETSCSF_REMOTE][link->leafmtype_mpi] == leafbuf) leafbuf = MPI_IN_PLACE; PetscCall(PetscMPIIntCast(sf->nleaves * link->bs, &count)); PetscCall(PetscSFLinkSyncStreamBeforeCallMPI(sf, link)); PetscCallMPI(MPI_Reduce(leafbuf, link->leafbuf_alloc[PETSCSF_REMOTE][link->leafmtype_mpi], count, link->basicunit, op, 0, comm)); /* Must do reduce with MPI builtin datatype basicunit */ PetscCallMPI(MPIU_Iscatter(link->leafbuf_alloc[PETSCSF_REMOTE][link->leafmtype_mpi], recvcount, unit, rootbuf, recvcount, unit, 0 /*rank 0*/, comm, req)); } PetscFunctionReturn(PETSC_SUCCESS); } static PetscErrorCode PetscSFBcastToZero_Allgather(PetscSF sf, MPI_Datatype unit, PetscMemType rootmtype, const void *rootdata, PetscMemType leafmtype, void *leafdata) { PetscSFLink link; PetscMPIInt rank; PetscMPIInt sendcount; MPI_Comm comm; void *rootbuf = NULL, *leafbuf = NULL; MPI_Request *req = NULL; PetscFunctionBegin; PetscCall(PetscSFLinkCreate(sf, unit, rootmtype, rootdata, leafmtype, leafdata, MPI_REPLACE, PETSCSF_BCAST, &link)); PetscCall(PetscSFLinkPackRootData(sf, link, PETSCSF_REMOTE, rootdata)); PetscCall(PetscSFLinkCopyRootBufferInCaseNotUseGpuAwareMPI(sf, link, PETSC_TRUE /* device2host before sending */)); PetscCall(PetscObjectGetComm((PetscObject)sf, &comm)); PetscCall(PetscMPIIntCast(sf->nroots, &sendcount)); PetscCall(PetscSFLinkGetMPIBuffersAndRequests(sf, link, PETSCSF_ROOT2LEAF, &rootbuf, &leafbuf, &req, NULL)); PetscCall(PetscSFLinkSyncStreamBeforeCallMPI(sf, link)); PetscCallMPI(MPIU_Igather(rootbuf == leafbuf ? MPI_IN_PLACE : rootbuf, sendcount, unit, leafbuf, sendcount, unit, 0 /*rank 0*/, comm, req)); PetscCall(PetscSFLinkGetInUse(sf, unit, rootdata, leafdata, PETSC_OWN_POINTER, &link)); PetscCall(PetscSFLinkFinishCommunication(sf, link, PETSCSF_ROOT2LEAF)); PetscCallMPI(MPI_Comm_rank(PetscObjectComm((PetscObject)sf), &rank)); if (rank == 0 && PetscMemTypeDevice(leafmtype) && !sf->use_gpu_aware_mpi) { PetscCall((*link->Memcpy)(link, PETSC_MEMTYPE_DEVICE, leafdata, PETSC_MEMTYPE_HOST, link->leafbuf[PETSCSF_REMOTE][PETSC_MEMTYPE_HOST], sf->leafbuflen[PETSCSF_REMOTE] * link->unitbytes)); } PetscCall(PetscSFLinkReclaim(sf, &link)); PetscFunctionReturn(PETSC_SUCCESS); } PETSC_INTERN PetscErrorCode PetscSFCreate_Allgather(PetscSF sf) { PetscSF_Allgather *dat = (PetscSF_Allgather *)sf->data; PetscFunctionBegin; sf->ops->BcastEnd = PetscSFBcastEnd_Basic; sf->ops->ReduceEnd = PetscSFReduceEnd_Allgatherv; /* Inherit from Allgatherv */ sf->ops->Reset = PetscSFReset_Allgatherv; sf->ops->Destroy = PetscSFDestroy_Allgatherv; sf->ops->FetchAndOpBegin = PetscSFFetchAndOpBegin_Allgatherv; sf->ops->FetchAndOpEnd = PetscSFFetchAndOpEnd_Allgatherv; sf->ops->GetRootRanks = PetscSFGetRootRanks_Allgatherv; sf->ops->CreateLocalSF = PetscSFCreateLocalSF_Allgatherv; sf->ops->GetGraph = PetscSFGetGraph_Allgatherv; sf->ops->GetLeafRanks = PetscSFGetLeafRanks_Allgatherv; /* Allgather stuff */ sf->ops->SetUp = PetscSFSetUp_Allgather; sf->ops->BcastBegin = PetscSFBcastBegin_Allgather; sf->ops->ReduceBegin = PetscSFReduceBegin_Allgather; sf->ops->BcastToZero = PetscSFBcastToZero_Allgather; sf->collective = PETSC_TRUE; PetscCall(PetscNew(&dat)); sf->data = (void *)dat; PetscFunctionReturn(PETSC_SUCCESS); }