#include <../src/vec/is/sf/impls/basic/gatherv/sfgatherv.h> /* Reuse the type. The difference is some fields (displs, recvcounts) are only significant on rank 0 in Gatherv. On other ranks they are harmless NULL. */ typedef PetscSF_Allgatherv PetscSF_Gatherv; PETSC_INTERN PetscErrorCode PetscSFBcastBegin_Gatherv(PetscSF sf,MPI_Datatype unit,PetscMemType rootmtype,const void *rootdata,PetscMemType leafmtype,void *leafdata,MPI_Op op) { PetscErrorCode ierr; PetscSFLink link; PetscMPIInt sendcount; MPI_Comm comm; PetscSF_Gatherv *dat = (PetscSF_Gatherv*)sf->data; void *rootbuf = NULL,*leafbuf = NULL; /* buffer seen by MPI */ MPI_Request *req; PetscFunctionBegin; ierr = PetscSFLinkCreate(sf,unit,rootmtype,rootdata,leafmtype,leafdata,op,PETSCSF_BCAST,&link);CHKERRQ(ierr); ierr = PetscSFLinkPackRootData(sf,link,PETSCSF_REMOTE,rootdata);CHKERRQ(ierr); ierr = PetscSFLinkCopyRootBufferInCaseNotUseGpuAwareMPI(sf,link,PETSC_TRUE/* device2host before sending */);CHKERRQ(ierr); ierr = PetscObjectGetComm((PetscObject)sf,&comm);CHKERRQ(ierr); ierr = PetscMPIIntCast(sf->nroots,&sendcount);CHKERRQ(ierr); ierr = PetscSFLinkGetMPIBuffersAndRequests(sf,link,PETSCSF_ROOT2LEAF,&rootbuf,&leafbuf,&req,NULL);CHKERRQ(ierr); ierr = PetscSFLinkSyncStreamBeforeCallMPI(sf,link,PETSCSF_ROOT2LEAF);CHKERRQ(ierr); ierr = MPIU_Igatherv(rootbuf,sendcount,unit,leafbuf,dat->recvcounts,dat->displs,unit,0/*rank 0*/,comm,req);CHKERRMPI(ierr); PetscFunctionReturn(0); } static PetscErrorCode PetscSFReduceBegin_Gatherv(PetscSF sf,MPI_Datatype unit,PetscMemType leafmtype,const void *leafdata,PetscMemType rootmtype,void *rootdata,MPI_Op op) { PetscErrorCode ierr; PetscSFLink link; PetscMPIInt recvcount; MPI_Comm comm; PetscSF_Gatherv *dat = (PetscSF_Gatherv*)sf->data; void *rootbuf = NULL,*leafbuf = NULL; /* buffer seen by MPI */ MPI_Request *req; PetscFunctionBegin; ierr = PetscSFLinkCreate(sf,unit,rootmtype,rootdata,leafmtype,leafdata,op,PETSCSF_REDUCE,&link);CHKERRQ(ierr); ierr = PetscSFLinkPackLeafData(sf,link,PETSCSF_REMOTE,leafdata);CHKERRQ(ierr); ierr = PetscSFLinkCopyLeafBufferInCaseNotUseGpuAwareMPI(sf,link,PETSC_TRUE/* device2host before sending */);CHKERRQ(ierr); ierr = PetscObjectGetComm((PetscObject)sf,&comm);CHKERRQ(ierr); ierr = PetscMPIIntCast(sf->nroots,&recvcount);CHKERRQ(ierr); ierr = PetscSFLinkGetMPIBuffersAndRequests(sf,link,PETSCSF_LEAF2ROOT,&rootbuf,&leafbuf,&req,NULL);CHKERRQ(ierr); ierr = PetscSFLinkSyncStreamBeforeCallMPI(sf,link,PETSCSF_LEAF2ROOT);CHKERRQ(ierr); ierr = MPIU_Iscatterv(leafbuf,dat->recvcounts,dat->displs,unit,rootbuf,recvcount,unit,0,comm,req);CHKERRMPI(ierr); PetscFunctionReturn(0); } PETSC_INTERN PetscErrorCode PetscSFFetchAndOpBegin_Gatherv(PetscSF sf,MPI_Datatype unit,PetscMemType rootmtype,void *rootdata,PetscMemType leafmtype,const void *leafdata,void *leafupdate,MPI_Op op) { PetscErrorCode ierr; PetscFunctionBegin; /* In Gatherv, each root only has one leaf. So we just need to bcast rootdata to leafupdate and then reduce leafdata to rootdata */ ierr = PetscSFBcastBegin(sf,unit,rootdata,leafupdate,MPI_REPLACE);CHKERRQ(ierr); ierr = PetscSFBcastEnd(sf,unit,rootdata,leafupdate,MPI_REPLACE);CHKERRQ(ierr); ierr = PetscSFReduceBegin(sf,unit,leafdata,rootdata,op);CHKERRQ(ierr); PetscFunctionReturn(0); } PETSC_INTERN PetscErrorCode PetscSFCreate_Gatherv(PetscSF sf) { PetscErrorCode ierr; PetscSF_Gatherv *dat = (PetscSF_Gatherv*)sf->data; PetscFunctionBegin; sf->ops->BcastEnd = PetscSFBcastEnd_Basic; sf->ops->ReduceEnd = PetscSFReduceEnd_Basic; /* Inherit from Allgatherv */ sf->ops->SetUp = PetscSFSetUp_Allgatherv; sf->ops->Reset = PetscSFReset_Allgatherv; sf->ops->Destroy = PetscSFDestroy_Allgatherv; sf->ops->GetGraph = PetscSFGetGraph_Allgatherv; sf->ops->GetLeafRanks = PetscSFGetLeafRanks_Allgatherv; sf->ops->GetRootRanks = PetscSFGetRootRanks_Allgatherv; sf->ops->FetchAndOpEnd = PetscSFFetchAndOpEnd_Allgatherv; sf->ops->CreateLocalSF = PetscSFCreateLocalSF_Allgatherv; /* Gatherv stuff */ sf->ops->BcastBegin = PetscSFBcastBegin_Gatherv; sf->ops->ReduceBegin = PetscSFReduceBegin_Gatherv; sf->ops->FetchAndOpBegin = PetscSFFetchAndOpBegin_Gatherv; ierr = PetscNewLog(sf,&dat);CHKERRQ(ierr); sf->data = (void*)dat; PetscFunctionReturn(0); }