#include <../src/vec/is/sf/impls/basic/gatherv/sfgatherv.h> #define PetscSFPackGet_Gatherv PetscSFPackGet_Allgatherv /* Reuse the type. The difference is some fields (displs, recvcounts) are only significant on rank 0 in Gatherv. On other ranks they are harmless NULL. */ typedef PetscSF_Allgatherv PetscSF_Gatherv; PETSC_INTERN PetscErrorCode PetscSFBcastAndOpBegin_Gatherv(PetscSF sf,MPI_Datatype unit,PetscMemType rootmtype,const void *rootdata,PetscMemType leafmtype,void *leafdata,MPI_Op op) { PetscErrorCode ierr; PetscSFPack link; PetscMPIInt rank,sendcount; MPI_Comm comm; char *recvbuf; PetscSF_Gatherv *dat = (PetscSF_Gatherv*)sf->data; PetscFunctionBegin; ierr = PetscSFPackGet_Gatherv(sf,unit,rootmtype,rootdata,leafmtype,leafdata,&link);CHKERRQ(ierr); ierr = PetscObjectGetComm((PetscObject)sf,&comm);CHKERRQ(ierr); ierr = PetscMPIIntCast(sf->nroots,&sendcount);CHKERRQ(ierr); ierr = MPI_Comm_rank(comm,&rank);CHKERRQ(ierr); if (op == MPIU_REPLACE) { recvbuf = (char*)leafdata; } else { if (!link->leafbuf[leafmtype] && !rank) {ierr = PetscMallocWithMemType(leafmtype,sf->nleaves*link->unitbytes,(void**)&link->leafbuf[leafmtype]);CHKERRQ(ierr);} /* Alloate leafbuf on rank 0 */ recvbuf = link->leafbuf[leafmtype]; } ierr = MPIU_Igatherv(rootdata,sendcount,unit,recvbuf,dat->recvcounts,dat->displs,unit,0/*rank 0*/,comm,link->rootreqs[PETSCSF_ROOT2LEAF_BCAST][rootmtype]);CHKERRQ(ierr); PetscFunctionReturn(0); } static PetscErrorCode PetscSFReduceBegin_Gatherv(PetscSF sf,MPI_Datatype unit,PetscMemType leafmtype,const void *leafdata,PetscMemType rootmtype,void *rootdata,MPI_Op op) { PetscErrorCode ierr; PetscSFPack link; PetscMPIInt recvcount; MPI_Comm comm; char *recvbuf; PetscSF_Gatherv *dat = (PetscSF_Gatherv*)sf->data; PetscFunctionBegin; ierr = PetscSFPackGet_Gatherv(sf,unit,rootmtype,rootdata,leafmtype,leafdata,&link);CHKERRQ(ierr); ierr = PetscObjectGetComm((PetscObject)sf,&comm);CHKERRQ(ierr); if (op == MPIU_REPLACE) { recvbuf = (char*)rootdata; } else { if (!link->rootbuf[rootmtype]) {ierr = PetscMallocWithMemType(rootmtype,sf->nroots*link->unitbytes,(void**)&link->rootbuf[rootmtype]);CHKERRQ(ierr);} recvbuf = link->rootbuf[rootmtype]; } ierr = PetscMPIIntCast(sf->nroots,&recvcount);CHKERRQ(ierr); ierr = MPIU_Iscatterv(leafdata,dat->recvcounts,dat->displs,unit,recvbuf,recvcount,unit,0,comm,link->rootreqs[PETSCSF_LEAF2ROOT_REDUCE][rootmtype]);CHKERRQ(ierr); PetscFunctionReturn(0); } PETSC_INTERN PetscErrorCode PetscSFFetchAndOpBegin_Gatherv(PetscSF sf,MPI_Datatype unit,PetscMemType rootmtype,void *rootdata,PetscMemType leafmtype,const void *leafdata,void *leafupdate,MPI_Op op) { PetscErrorCode ierr; PetscFunctionBegin; /* In Gatherv, each root only has one leaf. So we just need to bcast rootdata to leafupdate and then reduce leafdata to rootdata */ ierr = PetscSFBcastAndOpBegin(sf,unit,rootdata,leafupdate,MPIU_REPLACE);CHKERRQ(ierr); ierr = PetscSFBcastAndOpEnd(sf,unit,rootdata,leafupdate,MPIU_REPLACE);CHKERRQ(ierr); ierr = PetscSFReduceBegin(sf,unit,leafdata,rootdata,op);CHKERRQ(ierr); PetscFunctionReturn(0); } PETSC_INTERN PetscErrorCode PetscSFCreate_Gatherv(PetscSF sf) { PetscErrorCode ierr; PetscSF_Gatherv *dat = (PetscSF_Gatherv*)sf->data; PetscFunctionBegin; /* Inherit from Allgatherv */ sf->ops->SetUp = PetscSFSetUp_Allgatherv; sf->ops->Reset = PetscSFReset_Allgatherv; sf->ops->Destroy = PetscSFDestroy_Allgatherv; sf->ops->GetGraph = PetscSFGetGraph_Allgatherv; sf->ops->GetLeafRanks = PetscSFGetLeafRanks_Allgatherv; sf->ops->GetRootRanks = PetscSFGetRootRanks_Allgatherv; sf->ops->BcastAndOpEnd = PetscSFBcastAndOpEnd_Allgatherv; sf->ops->ReduceEnd = PetscSFReduceEnd_Allgatherv; sf->ops->FetchAndOpEnd = PetscSFFetchAndOpEnd_Allgatherv; sf->ops->CreateLocalSF = PetscSFCreateLocalSF_Allgatherv; /* Gatherv stuff */ sf->ops->BcastAndOpBegin = PetscSFBcastAndOpBegin_Gatherv; sf->ops->ReduceBegin = PetscSFReduceBegin_Gatherv; sf->ops->FetchAndOpBegin = PetscSFFetchAndOpBegin_Gatherv; ierr = PetscNewLog(sf,&dat);CHKERRQ(ierr); sf->data = (void*)dat; PetscFunctionReturn(0); }