static char help[]= "Test PetscSFFCompose when the ilocal array is not the identity\n\n"; #include #include int main(int argc, char **argv) { PetscErrorCode ierr; PetscSF sfA, sfB, sfBA; PetscInt nrootsA, nleavesA, nrootsB, nleavesB; PetscInt *ilocalA, *ilocalB; PetscSFNode *iremoteA, *iremoteB; Vec a, b, ba; const PetscScalar *arrayR; PetscScalar *arrayW; PetscMPIInt size; PetscInt i; PetscInt maxleafB; PetscBool flag = PETSC_FALSE; ierr = PetscInitialize(&argc,&argv,NULL,help);if (ierr) return ierr; ierr = MPI_Comm_size(PETSC_COMM_WORLD,&size);CHKERRMPI(ierr); if (size != 1) SETERRQ(PETSC_COMM_WORLD, PETSC_ERR_USER, "Only coded for one MPI process"); ierr = PetscSFCreate(PETSC_COMM_WORLD, &sfA);CHKERRQ(ierr); ierr = PetscSFCreate(PETSC_COMM_WORLD, &sfB);CHKERRQ(ierr); ierr = PetscSFSetFromOptions(sfA);CHKERRQ(ierr); ierr = PetscSFSetFromOptions(sfB);CHKERRQ(ierr); ierr = PetscOptionsGetBool(NULL,NULL,"-sparse_sfB",&flag,NULL);CHKERRQ(ierr); if (flag) { /* sfA permutes indices, sfB has sparse leaf space. */ nrootsA = 3; nleavesA = 3; nrootsB = 3; nleavesB = 2; } else { /* sfA reverses indices, sfB is identity */ nrootsA = nrootsB = nleavesA = nleavesB = 4; } ierr = PetscMalloc1(nleavesA, &ilocalA);CHKERRQ(ierr); ierr = PetscMalloc1(nleavesA, &iremoteA);CHKERRQ(ierr); ierr = PetscMalloc1(nleavesB, &ilocalB);CHKERRQ(ierr); ierr = PetscMalloc1(nleavesB, &iremoteB);CHKERRQ(ierr); for (i = 0; i < nleavesA; i++) { iremoteA[i].rank = 0; iremoteA[i].index = i; if (flag) { ilocalA[i] = (i + 1) % nleavesA; } else { ilocalA[i] = nleavesA - i - 1; } } for (i = 0; i < nleavesB; i++) { iremoteB[i].rank = 0; if (flag) { ilocalB[i] = nleavesB - i; iremoteB[i].index = nleavesB - i - 1; } else { ilocalB[i] = i; iremoteB[i].index = i; } } ierr = PetscSFSetGraph(sfA, nrootsA, nleavesA, ilocalA, PETSC_OWN_POINTER, iremoteA, PETSC_OWN_POINTER);CHKERRQ(ierr); ierr = PetscSFSetGraph(sfB, nrootsB, nleavesB, ilocalB, PETSC_OWN_POINTER, iremoteB, PETSC_OWN_POINTER);CHKERRQ(ierr); ierr = PetscSFSetUp(sfA);CHKERRQ(ierr); ierr = PetscSFSetUp(sfB);CHKERRQ(ierr); ierr = PetscObjectSetName((PetscObject)sfA, "sfA");CHKERRQ(ierr); ierr = PetscObjectSetName((PetscObject)sfB, "sfB");CHKERRQ(ierr); ierr = VecCreateSeq(PETSC_COMM_WORLD, nrootsA, &a);CHKERRQ(ierr); ierr = VecCreateSeq(PETSC_COMM_WORLD, nleavesA, &b);CHKERRQ(ierr); ierr = PetscSFGetLeafRange(sfB, NULL, &maxleafB);CHKERRQ(ierr); ierr = VecCreateSeq(PETSC_COMM_WORLD, maxleafB+1, &ba);CHKERRQ(ierr); ierr = VecGetArray(a, &arrayW);CHKERRQ(ierr); for (i = 0; i < nrootsA; i++) { arrayW[i] = (PetscScalar)i; } ierr = VecRestoreArray(a, &arrayW);CHKERRQ(ierr); ierr = PetscPrintf(PETSC_COMM_WORLD, "Initial Vec A\n");CHKERRQ(ierr); ierr = VecView(a, NULL);CHKERRQ(ierr); ierr = VecGetArrayRead(a, &arrayR);CHKERRQ(ierr); ierr = VecGetArray(b, &arrayW);CHKERRQ(ierr); ierr = PetscSFBcastBegin(sfA, MPIU_SCALAR, arrayR, arrayW,MPI_REPLACE);CHKERRQ(ierr); ierr = PetscSFBcastEnd(sfA, MPIU_SCALAR, arrayR, arrayW,MPI_REPLACE);CHKERRQ(ierr); ierr = VecRestoreArray(b, &arrayW);CHKERRQ(ierr); ierr = VecRestoreArrayRead(a, &arrayR);CHKERRQ(ierr); ierr = PetscPrintf(PETSC_COMM_WORLD, "\nBroadcast A->B over sfA\n");CHKERRQ(ierr); ierr = VecView(b, NULL);CHKERRQ(ierr); ierr = VecGetArrayRead(b, &arrayR);CHKERRQ(ierr); ierr = VecGetArray(ba, &arrayW);CHKERRQ(ierr); arrayW[0] = 10.0; /* Not touched by bcast */ ierr = PetscSFBcastBegin(sfB, MPIU_SCALAR, arrayR, arrayW,MPI_REPLACE);CHKERRQ(ierr); ierr = PetscSFBcastEnd(sfB, MPIU_SCALAR, arrayR, arrayW,MPI_REPLACE);CHKERRQ(ierr); ierr = VecRestoreArrayRead(b, &arrayR);CHKERRQ(ierr); ierr = VecRestoreArray(ba, &arrayW);CHKERRQ(ierr); ierr = PetscPrintf(PETSC_COMM_WORLD, "\nBroadcast B->BA over sfB\n");CHKERRQ(ierr); ierr = VecView(ba, NULL);CHKERRQ(ierr); ierr = PetscSFCompose(sfA, sfB, &sfBA);CHKERRQ(ierr); ierr = PetscSFSetFromOptions(sfBA);CHKERRQ(ierr); ierr = PetscObjectSetName((PetscObject)sfBA, "(sfB o sfA)");CHKERRQ(ierr); ierr = VecGetArrayRead(a, &arrayR);CHKERRQ(ierr); ierr = VecGetArray(ba, &arrayW);CHKERRQ(ierr); arrayW[0] = 11.0; /* Not touched by bcast */ ierr = PetscSFBcastBegin(sfBA, MPIU_SCALAR, arrayR, arrayW,MPI_REPLACE);CHKERRQ(ierr); ierr = PetscSFBcastEnd(sfBA, MPIU_SCALAR, arrayR, arrayW,MPI_REPLACE);CHKERRQ(ierr); ierr = VecRestoreArray(ba, &arrayW);CHKERRQ(ierr); ierr = VecRestoreArrayRead(a, &arrayR);CHKERRQ(ierr); ierr = PetscPrintf(PETSC_COMM_WORLD, "\nBroadcast A->BA over sfBA (sfB o sfA)\n");CHKERRQ(ierr); ierr = VecView(ba, NULL);CHKERRQ(ierr); ierr = VecDestroy(&ba);CHKERRQ(ierr); ierr = VecDestroy(&b);CHKERRQ(ierr); ierr = VecDestroy(&a);CHKERRQ(ierr); ierr = PetscSFView(sfA, NULL);CHKERRQ(ierr); ierr = PetscSFView(sfB, NULL);CHKERRQ(ierr); ierr = PetscSFView(sfBA, NULL);CHKERRQ(ierr); ierr = PetscSFDestroy(&sfA);CHKERRQ(ierr); ierr = PetscSFDestroy(&sfB);CHKERRQ(ierr); ierr = PetscSFDestroy(&sfBA);CHKERRQ(ierr); ierr = PetscFinalize(); return ierr; } /*TEST test: suffix: 1 test: suffix: 2 filter: grep -v "type" | grep -v "sort" args: -sparse_sfB test: suffix: 2_window filter: grep -v "type" | grep -v "sort" output_file: output/ex4_2.out args: -sparse_sfB -sf_type window -sf_window_sync {{fence active lock}} -sf_window_flavor {{create dynamic allocate}} requires: defined(PETSC_HAVE_MPI_ONE_SIDED) defined(PETSC_HAVE_MPI_FEATURE_DYNAMIC_WINDOW) # The nightly test suite with MPICH uses ch3:sock, which is broken when winsize == 0 in some of the processes test: suffix: 2_window_shared filter: grep -v "type" | grep -v "sort" output_file: output/ex4_2.out args: -sparse_sfB -sf_type window -sf_window_sync {{fence active lock}} -sf_window_flavor shared requires: defined(PETSC_HAVE_MPI_PROCESS_SHARED_MEMORY) !defined(PETSC_HAVE_MPICH_NUMVERSION) defined(PETSC_HAVE_MPI_ONE_SIDED) TEST*/