e9e07e3c173f1020aad3c9d07d1bbff6c36fa923 - Merge pull request #535 from CEED/jeremy/solids-pressure

Tue, 19 May 2020 21:50:51 +0000

Merge pull request #535 from CEED/jeremy/solids-pressureSolids - view diagnostic quantities List of files: /libCEED/examples/solids/.gitignore

226336a0ea9410015b6a973d3e578b3128ae90cb - Solids - update gitignore

Fri, 15 May 2020 18:24:55 +0000

Solids - update gitignore List of files: /libCEED/examples/solids/.gitignore

b250684e6ab7a947684c360148fcfb7c3899437a - Merge branch 'master' into valeria/jupyter-notebook-tutorials

Thu, 26 Mar 2020 21:05:59 +0000

Merge branch 'master' into valeria/jupyter-notebook-tutorials List of files: /libCEED/examples/solids/.gitignore

ccaff0309dc399f656ea11018b919b30feb8b0fa - Solid Mechanics Example (#474)

Thu, 26 Mar 2020 21:03:55 +0000

Solid Mechanics Example (#474)libCEED + PETSc Solid Mechanics example Co-authored-by: Jeremy L Thompson Co-authored-by: Arash Mehraban Co-authored-by: Jed Brown Co-authored-by: Valeria Barra * Solids - initial commit of elasticity example Co-authored-by: Jeremy L Thompson Co-authored-by: Arash Mehraban * Solids - add VLA macro * Solids - fix test for mesh file output string * Solids - update documentation Co-authored-by: Jeremy L Thompson Co-authored-by: Arash Mehraban * Solids - update README * Solids - update ctx struct and casting for CUDA * Tests - clean up test conditions for GPU backends * GPU - fix falbacks identified * CUDA - whitelist FDM Inverse * make style * doc: solids editing/correctness * Solids - separate FE boilerplate into its own function * Solids - clean up double includes * doc: add more complete explanation of hyperelasticity and formulation * Solids - Use ISGetSize for global number of face sets (had no effect on PETSc bug in MR 2615) * edited docs for hyperFS * Improve doc of solids example with some constitent notation and fonts * HyperSS docs modified * edited typo * linearization added * fixed a typo * Improved doc * doc: more writing on hyperelasticity and implementation tradeoffs * Solids - fix typo * Solids - compute and store C, Cinv, and S as symmetric * Solids - use new Newton linearization, but its not converging * Solids - update BC handling * Solids - update README with new BC options * removed old notation * Solids - whitespace changes only in documentation * doc: adjust differential notation and derive dP(dF) * Solids - small documentation flow edits * Solids - simplify setting BCs * Solids - Symmetritize e in SS * Solids - set more reasonable default number of steps for nonlinear * Solids - fix documentation typo * Solids - clean up computation of deltaS * Solids - fix sample runs * Solids - fix hyperSS jacobian * Solids - fix hyperSS documentation * Solids - clean up code for hyperSS * Solids - add file and function docstrings * doc: commutative diagram of linearization and stable stress expression * Solids - update hyperSS documentation with linearization * doc: further tips on stable computation * Solids - fix typo with trace in hyperSS * Solids - intro and hyperSS documentation updates * Solids - update hyperFS for numerical stability with small E and nearly incompressible * examples/solids: simpler C = I + 2E * Solids - more compact/readable E computation * Solids - minor style consistency change * Solids - replace log1p with series approximation, log1p is not vectorized in libc * Solids - refactor common components between hyperFSF and hyperFSdF * examples/solids: use PETSc dependency flags for incremental rebuild * examples/solids: extend range of log1p_series via shift/scale * Solids - add bc_clamp_max option to specify maximum displacement for clamped boundary * make style * Solids - update with sample run informantion and spellchecking * Doc - typo fixes * Solids - homogonize presentation of command line options * examples/solids: fix -Wmisleading-indentation * examples/fluids: PETSc 3.13 compatibility * examples/solids: use log1p for numerical stability in hyperSS * doc: copy editing in examples/solids * Solids - update documentation on running the code * Solids - convert README to rst and include in documentation * Solids - clean dependency file * Solids - use log1p approximation in hyperSS as well * Solids - update README to explain mms * Solids - switch range on hyperSS log1p series approximation * Solids - update README to clarify mandatory options * Solids - add link to sample meshes * Solids - simplify listing of mesh options * Travis - use newer PETSc * Solids - update sample run to list [.exo file] instead of name of sample mesh * Solids - update make clean to remove src/*.d * examples/solids: makefile cleanup * make style * doc examples/solids: clean up and explain nondimensionalization * examples/solids: document algebraic solver * examples/solids: use CG for Chebyshev eig estimation * doc: fix references to examples/fluids * Solids - remove mesh folder * Solids - drop expicit ExodusII requirement, PETSc supports many types of meshes * doc: mention PETSc --download-exodusii for Exodus * doc: fix latexpdf * Fix \longrightarrow rendering in PDF * Solids - fix toctree link to README for pdflatex * Examples and BPs Docs: Homogenize math with dS and dV and other tiny esthetics * Solids - fix unshifted series for hyperSS log1p * Improve doc of bpssphere: Add differential for consistency with all other examples and explain domain for clarity * Solids - include sample mesh image * Move mesh figure after note and slightly rename inclusion marker Co-authored-by: Arash Mehraban Co-authored-by: Jed Brown Co-authored-by: valeriabarra List of files: /libCEED/examples/solids/.gitignore

Changes in .gitignore

e9e07e3c173f1020aad3c9d07d1bbff6c36fa923 - Merge pull request #535 from CEED/jeremy/solids-pressure

226336a0ea9410015b6a973d3e578b3128ae90cb - Solids - update gitignore

b250684e6ab7a947684c360148fcfb7c3899437a - Merge branch 'master' into valeria/jupyter-notebook-tutorials

ccaff0309dc399f656ea11018b919b30feb8b0fa - Solid Mechanics Example (#474)