Changes in performance_medium

ec14d8c89faff4da33ce280481028a5ac84471b1 - Merge branch 'master' into knepley/feature-plex-sphere-mesh

Sat, 27 May 2017 04:49:49 +0000

Merge branch 'master' into knepley/feature-plex-sphere-mesh* master: (2633 commits) Bib: Added ref SNES ex56: Update test output add a citation to petsc.bib Plex: Initialize variables initialize ap as complained by the nightly tests Plex ex3: Update to new point function API initialize some variables as complained by nightly tests SNES ex12: Mix misnaming Nf --> Nc update tests add tests add MatView_SeqXAIJ_ASCII_structonly(); enable A->structure_only in MatSetValuesBlocked_SeqBAIJ typo fill-in some references Bib: Fixed ref Plex: Added PLY to file support Plex: Adding PLY support PetscDS: Turn off Fortran bindings for Constants Plex tests: Updated to new point function API SNES ex56: Moved tests to new format DM: Allow field projection functions to take an array of scalars - This will allow us to pass in user data to kernels without void *, more efficiency than aux fields ...Conflicts: config/builder.py include/petscdmplex.h src/dm/impls/plex/examples/tests/ex1.c src/dm/impls/plex/plexcreate.c src/dm/impls/plex/plexgmsh.c src/snes/examples/tutorials/ex63.c List of files: /petsc/src/benchmarks/results/performance_medium

f172c304b9cb90251bd7241089b2d057c0d8dcaa - Merge branch 'knepley/feature-plex-tests-new' into knepley/feature-plex-pragmatic-parallel

Wed, 15 Mar 2017 16:59:52 +0000

Merge branch 'knepley/feature-plex-tests-new' into knepley/feature-plex-pragmatic-parallel* knepley/feature-plex-tests-new: Plex ex12: Added logging stages Plex ex1: Added logging stages TS ex18: Indicate broken tests TS ex11: Indicate broken test SNES ex62: Added SIMPLE tests SNES ex12: Removed old tests Plex: Fixing test descriptions update to latest hypre tag on github fix 'inf' vs 'Inf' diff wrt vec_vec_utils_tagger_tutorials-ex1_8,9,18,19 MatSetOption(mat,MAT_IGNORE_ZERO_ENTRIES,PETSC_TRUE) no longer applies to zero values set or added to the matrix diagonal, they are now not ignored and are included in the matrix nonzero structure. This is useful for Jacobians passed to TS. replace use/mention of depreciated -log_summary in many places add extchem.py which was written years ago but never put in the distribution (hence it is broken). refix 96a2602 as it gives parsing erros with gmakegentest.py from scott/test-harness-altfiles petsc4py: update to snapshot with MatGetSubMatrices -> MatCreateSubMatrices etc API changes PetscCMPLX: assume type punning is safe List of files: /petsc/src/benchmarks/results/performance_medium

a166d2596d8add78ff353c6afe83912bca8cd942 - Merge branch 'knepley/fix-plex-example-logging' into knepley/feature-plex-torus

Wed, 15 Mar 2017 16:58:37 +0000

Merge branch 'knepley/fix-plex-example-logging' into knepley/feature-plex-torus* knepley/fix-plex-example-logging: (151 commits) Plex ex12: Added logging stages Plex ex1: Added logging stages update to latest hypre tag on github fix 'inf' vs 'Inf' diff wrt vec_vec_utils_tagger_tutorials-ex1_8,9,18,19 MatSetOption(mat,MAT_IGNORE_ZERO_ENTRIES,PETSC_TRUE) no longer applies to zero values set or added to the matrix diagonal, they are now not ignored and are included in the matrix nonzero structure. This is useful for Jacobians passed to TS. replace use/mention of depreciated -log_summary in many places add extchem.py which was written years ago but never put in the distribution (hence it is broken). petsc4py: update to snapshot with MatGetSubMatrices -> MatCreateSubMatrices etc API changes Minor fixes for tchem examples due to changes in PETSc infrastructure update webpage about API changes add help menu for MatCreateSubMatricesMPI() PetscCMPLX: assume type punning is safe rename struct Mat_SubMat -> Mat_SubSppt add a little information to the manual about using tchem rename MatCreateSubMatrixComposite -> MatCreateSubMatrixVirtual; Mat_SubMatrix -> Mat_SubVirtual need to protect the \ passed on the makefile on my Mac Bib: Updated ref update src/mat/examples/tests/output/ex23_#.out rename MatGetSubMat -> MatCreateSubMat Mark MatCreateMPIAIJWithSplitArrays() and MatMPIAIJSetPreallocationCSR() with MAT_NO_OFF_PROC_ENTRIES ...Conflicts: src/dm/impls/plex/examples/tests/ex1.c src/dm/impls/plex/examples/tests/ex12.c List of files: /petsc/src/benchmarks/results/performance_medium

851d29aaf3a2215140b1da563c93fac45421fa56 - Merge branch 'knepley/fix-plex-example-logging' into knepley/feature-plex-tests-new

Wed, 15 Mar 2017 16:56:37 +0000

Merge branch 'knepley/fix-plex-example-logging' into knepley/feature-plex-tests-new* knepley/fix-plex-example-logging: (151 commits) Plex ex12: Added logging stages Plex ex1: Added logging stages update to latest hypre tag on github fix 'inf' vs 'Inf' diff wrt vec_vec_utils_tagger_tutorials-ex1_8,9,18,19 MatSetOption(mat,MAT_IGNORE_ZERO_ENTRIES,PETSC_TRUE) no longer applies to zero values set or added to the matrix diagonal, they are now not ignored and are included in the matrix nonzero structure. This is useful for Jacobians passed to TS. replace use/mention of depreciated -log_summary in many places add extchem.py which was written years ago but never put in the distribution (hence it is broken). petsc4py: update to snapshot with MatGetSubMatrices -> MatCreateSubMatrices etc API changes Minor fixes for tchem examples due to changes in PETSc infrastructure update webpage about API changes add help menu for MatCreateSubMatricesMPI() PetscCMPLX: assume type punning is safe rename struct Mat_SubMat -> Mat_SubSppt add a little information to the manual about using tchem rename MatCreateSubMatrixComposite -> MatCreateSubMatrixVirtual; Mat_SubMatrix -> Mat_SubVirtual need to protect the \ passed on the makefile on my Mac Bib: Updated ref update src/mat/examples/tests/output/ex23_#.out rename MatGetSubMat -> MatCreateSubMat Mark MatCreateMPIAIJWithSplitArrays() and MatMPIAIJSetPreallocationCSR() with MAT_NO_OFF_PROC_ENTRIES ...Conflicts: src/dm/impls/plex/examples/tests/ex12.c List of files: /petsc/src/benchmarks/results/performance_medium

609bdbee21ea3be08735c64dbe00a9ab27759925 - replace use/mention of depreciated -log_summary in many places

Sat, 11 Mar 2017 00:13:15 +0000

replace use/mention of depreciated -log_summary in many placesReported-by: Pierre Jolivet List of files: /petsc/src/benchmarks/results/performance_medium

f37e7628b0b0f7d9f1774180acd80c8ca17474e2 - Merge branch 'master' into barry/add-pcfieldsplit-logevent

Sun, 21 Feb 2016 16:49:14 +0000

Merge branch 'master' into barry/add-pcfieldsplit-logevent List of files: /petsc/src/benchmarks/results/performance_medium

f44c6289809fde6fa30cd063773daee08b23f33b - Merge branch 'master' into barry/add-pcreset-hypre-for-master

Thu, 28 Jan 2016 20:29:16 +0000

Merge branch 'master' into barry/add-pcreset-hypre-for-masterNeeded to move PCDestroy_HYPRE() added to master to PCReset_HYPRE() since that was introducedas a bug fix for maint List of files: /petsc/src/benchmarks/results/performance_medium

9bc1b9bec76baea0207aa4cab7093fce78dd176c - Merge branch 'master' into barry-allow-vecset-nan-3.6

Tue, 03 Nov 2015 19:38:01 +0000

Merge branch 'master' into barry-allow-vecset-nan-3.6 List of files: /petsc/src/benchmarks/results/performance_medium

bbd98b0ddc3b728de2842e56499debb5c79c81f3 - Merge branch 'master' into shri/add-tsevent-to-powergrid-examples

Mon, 26 Oct 2015 22:45:41 +0000

Merge branch 'master' into shri/add-tsevent-to-powergrid-examples List of files: /petsc/src/benchmarks/results/performance_medium

1ceb14c030f320ad962f864c6f8de98a26bbbaf7 - Merge branch 'master' into pr263/PierreBdR/ts-domain-error-in-stage/master

Fri, 23 Oct 2015 03:37:39 +0000

Merge branch 'master' into pr263/PierreBdR/ts-domain-error-in-stage/master List of files: /petsc/src/benchmarks/results/performance_medium

c5e0a37604ce9502b624cfbc275dd0fb4e874327 - Merge branch 'master' into barry/always-mark-floats

Thu, 15 Oct 2015 22:38:16 +0000

Merge branch 'master' into barry/always-mark-floatsNeeded to merge in master to resolve conflicts that will appear when this branch is merged with master List of files: /petsc/src/benchmarks/results/performance_medium

3458826566740d380a0f01335e326039948fd12f - Merge branch 'master' into stefano_zampini/feature-pcbddc-saddlepoint

Thu, 08 Oct 2015 09:57:19 +0000

Merge branch 'master' into stefano_zampini/feature-pcbddc-saddlepointConflicts: src/ksp/pc/impls/bddc/bddcprivate.c List of files: /petsc/src/benchmarks/results/performance_medium

417c5e9afaacda2cf655e58897fdfc9d4dd1055e - Merge branch 'master' into tisaac/dmforest

Mon, 05 Oct 2015 16:36:24 +0000

Merge branch 'master' into tisaac/dmforestGet 3.6.2 patches* master: (1360 commits) remove nasty memory leak with CUDA code when using block Jacobi with multiple blocks per process print abs in Fortran test example in order to have same result with real and complex builds changed outdate mpirun and -np to mpiexec and -n force sqrt to be taken in the precision of PetscReal in fortran examples continuation line too soon for some compilers stop configure if user selected C++ clanguage, single precision, complex combination since we do not support it fixes for Fortran examples to compile cleanly in single precision that do not involve complex numbers fixes to Fortran examples to compile cleanly in single precision complex fix previous mistake must cast 1. to PetscScalar before dividing by a PetscScalar (C++ complex class is terrible) must cast 0.0 to PetscScalar before comparison with a PetscScalar changed order of suggested locations of downloadable PETSc to Barry's preference Increase patchlevel to 3.6.2 remove debug print statement from two commits before remove debug print statements I accidently left in the last commit PetscDraw: Fix dummy definition of PetscDrawCollective{Begin|End}() remove cleanupMumps flag from MatDestroy_Mumps() it should always free the memory it allocated Bug detected while adding features to libMesh improved viewing of fractional counts in xml nested log viewing fixed bug in output of doubles to xml nested log files chombo: build only libs - not examples fix typo. 'gcc-4.8 --with-cxx-dialect=C++11' gives a warning with this line - even though its in a #ifdef thats never enabled. ... List of files: /petsc/src/benchmarks/results/performance_medium

a6404fbfb1cfbf30d2bac9856cef3bf7411483d5 - changed outdate mpirun and -np to mpiexec and -n

Sun, 04 Oct 2015 21:00:37 +0000

changed outdate mpirun and -np to mpiexec and -n List of files: /petsc/src/benchmarks/results/performance_medium

0f55b88d1ac75fa99e70a53aff055236a607e7f1 - backout all chmod stuff in bf971ba58125

Tue, 03 Jul 2012 23:27:57 +0000

backout all chmod stuff in bf971ba58125[but keep diffs to src/mat/impls/aij/mpi/mpimatmatmult.c ]Hg-commit: 4a812fc1f35496ce2717c7da9ef12ffabbd13258 List of files: /petsc/src/benchmarks/results/performance_medium

c0174eb74783e1ccfa817272a5782dd72b4cfcef - removed a spurious call to MatSetBlockSize.

Tue, 03 Jul 2012 18:38:07 +0000

removed a spurious call to MatSetBlockSize.Hg-commit: bf971ba58125bd8cf7ceb2a9d0f5cdf27c27cc6a List of files: /petsc/src/benchmarks/results/performance_medium

d39137a2a458adbd0a91d85ebaeb24b763c9aad8 - commit after merge

Thu, 12 Jan 2012 13:37:38 +0000

commit after mergeHg-commit: d540875a63b3c979c82b6a7fa7f062571e906d10 List of files: /petsc/src/benchmarks/results/performance_medium

247e2d9283ff1bbf8950108a11f1a3a3a92a3dd5 - Mass revert file modes that were made executable in f6e61ee9c329

Fri, 06 Jan 2012 21:47:21 +0000

Mass revert file modes that were made executable in f6e61ee9c329Hg-commit: 116d90d0b66125cee0db3e7351047057e756baf5 List of files: /petsc/src/benchmarks/results/performance_medium

832f73847984dd023cdcdcb50cf91f15c439cac4 - Merge

Sun, 01 Jan 2012 21:29:02 +0000

MergeHg-commit: ee8d91ae0580d1d4fa92be38a18d40c838b9a257 List of files: /petsc/src/benchmarks/results/performance_medium

14e519b04ad9914710bd5c45309095b042ccf36e - changed MatMatMult to MatTranposeMatMult.

Sat, 31 Dec 2011 20:22:50 +0000

changed MatMatMult to MatTranposeMatMult.Hg-commit: f6e61ee9c329774cd5343eea1ee6b7432be17c3f List of files: /petsc/src/benchmarks/results/performance_medium