en Copyright 2025 Java http://opengrok.phasta.colorado.edu:8080/source/history/petsc/systems/Apple/OSX/bin/makeall#3d996552296fa5aff2ef76b1450b6d3231aa62c2 Merge branch 'master' into stefano_zampini/feature-pcbddc-saddlepointConflicts: src/docs/website/documentation/changes/dev.html src/ksp/ksp/examples/tutorials/ex59.c src/ksp/pc/impls/bddc/bddc.c src/ksp/pc/impls/bddc/bddcfetidp.c src/ksp/pc/impls/bddc/bddcprivate.c src/ksp/pc/impls/bddc/bddcschurs.c src/mat/impls/is/matis.c src/mat/impls/is/matis.h List of files: /petsc/systems/Apple/OSX/bin/makeall Tue, 19 Jul 2016 17:47:40 +0000 Stefano Zampini <stefano.zampini@gmail.com> http://opengrok.phasta.colorado.edu:8080/source/history/petsc/systems/Apple/OSX/bin/makeall#f1b08128463284889cf0888f28baffa88cd42e9a Merge branch 'knepley/fix-vec-visibility' into knepley/feature-dm-point-location-failure* knepley/fix-vec-visibility: Vec: DuplicateVecs_Default and DestroyVecs_Default should be available to the user - This is needed is IBAMR Fix error in MPI-uni when creating additional MPI communicators did not properly mark them as active OSX: fix .dmg create script to set PETSC_DIR Also fix paths to work on case sensitive file systems. Configure: Fix pickling error This is still a problem since it reveals that something is not cleaning up correctly. Configure needs a global rewrite badly Configure: Silence warning on test compile Configure: Bump MPFR version remove multiple the the constructs cd src/benchmarks/steams should be: cd src/benchmarks/streams missing seealso for NASM List of files: /petsc/systems/Apple/OSX/bin/makeall Thu, 02 Jun 2016 14:53:36 +0000 Matthew G. Knepley <knepley@gmail.com> http://opengrok.phasta.colorado.edu:8080/source/history/petsc/systems/Apple/OSX/bin/makeall#419beca1004e80ebaf01ed86ca4fa04d30fb35e8 Merge branch 'maint' List of files: /petsc/systems/Apple/OSX/bin/makeall Wed, 01 Jun 2016 20:39:33 +0000 Barry Smith <bsmith@mcs.anl.gov> http://opengrok.phasta.colorado.edu:8080/source/history/petsc/systems/Apple/OSX/bin/makeall#966be33a19c9230d4aa438248a644248d45cc287 OSX: fix .dmg create script to set PETSC_DIRAlso fix paths to work on case sensitive file systems. List of files: /petsc/systems/Apple/OSX/bin/makeall Wed, 01 Jun 2016 18:47:46 +0000 Satish Balay <balay@mcs.anl.gov> http://opengrok.phasta.colorado.edu:8080/source/history/petsc/systems/Apple/OSX/bin/makeall#3aa2d9e3a17455108487be9a174c0f069d9014ad Merge branch 'barry/fix-nonew-notcollective/maint' into jed/mat-assembly-perfJed this fucking 6+ month running thing in next that is not in master is a royal fucking pain in the ass andan abuse of git. I think it is not justified to ever have anything in next for more than a few weeks at most.Either take it out of next if it is broken or put it in master if it is not broken. Hanging around in next butnot master for ever is not a good policy. List of files: /petsc/systems/Apple/OSX/bin/makeall Sat, 15 Aug 2015 01:10:07 +0000 Barry Smith <bsmith@mcs.anl.gov> http://opengrok.phasta.colorado.edu:8080/source/history/petsc/systems/Apple/OSX/bin/makeall#e1b06f76ad35ce2a89fc667d1feb3b2de35f6e0a Merge branch 'master' into knepley/solkx* master: (6933 commits) Bib: Added reference Includegraph: Updated for compatibility with new folder layout. Add SNESLineSearchReason to fortran includes Also truncate names to fit 32 char fortran limit fix compile warnings /usr/home/balay/petsc.clone-2/src/vec/vec/interface/vector.c:1944: warning: division by zero in '1.0e+0 / 0.' /usr/home/balay/petsc.clone-2/src/ksp/ksp/interface/itfunc.c:508: warning: 'vec_rhs' may be used uninitialized in this function updated output for new trust region initial size initial size of the trust region is set as a percent of the norm of the initial guess, it should not be related to the initial norm of the function (which is kind of nuts). The default bounds for SNESVISetVariableBounds() in the manual page were reversed from correct values Bib: Added refs Bib: Update MPICH webpage Plex: Forgot to close file removed nonexistent ex46f from makefile test rule Revert "fixed bad merge into master" fixed bad merge into master fix memory leak in mkl_pardiso fix some formatting in mkl_pardiso code mv runex111 from TESTEXAMPLES_C to TESTEXAMPLES_DATAFILESPATH Mat+Doc: More Fortran docs Plex ex3: Run tests with the correct number of field components Bib: Added TetGen cite parmetis: make sure 'ldd libparmetis.so' points to the correct libmetis.so that its linked with. small fix as reported by the nightly test ...Conflicts: config/builder.py List of files: /petsc/systems/Apple/OSX/bin/makeall Wed, 20 May 2015 13:47:27 +0000 Matthew G. Knepley <knepley@gmail.com> http://opengrok.phasta.colorado.edu:8080/source/history/petsc/systems/Apple/OSX/bin/makeall#5a4ab5aba6d7ba6bb46f95414304dbd9bb09f678 Merge branch 'master' into tisaac/dmforestIf we're going to start developing on this again, the recent changes to thelocation of configuration files will make it annoying to switch to and fromthis branch. Matt's and my fixes in DMPlex will also be relevant.* master: (1557 commits) MatLoad_MPIDense() always allocated array space even if it was previously provided Clarified lumping options for PCFieldSplitSchurPreType SELFP. fixed up PetscInfo in GAMG TSErrorWeightedNorm[2|Infinity]: API changes MatLoad_SeqDense() always allocated new space for the data even if the user already provided it Fixed DMCompositeGetAccessArray() to support readonly vectors Fix obviously-wrong aspects of documentation on SNESVINEWTONRSLS and SNESVINEWTONSSLS. fixed example to compile - demonstrates a bug var name 'len' was F90 key word For user provided Jacobian functions they should always assembly into the second matrix, the one from which the preconditioner is built because the first may be used as matrix-free with -snes_mf_operator Suggest --with-64-bit-indices if users mistakenly use --with-64bit-indices Fix configure logging of integer size. missing underscore in #define of vecgetarrayread translation of fortran stub for VECGETARRAYREAD updated test output files to reflect differences introduced previously in PCView output -ksp_type preonly does not support -ksp_monitor_short so remove from test line to prevent extranious warning output missing CHKERRQ; and ugly double declaration of ierr Plex ex3: For want of a semicolon, the kingdom was lost MatSetValuesMPISBAIJ will now print correct global indices when error generated due to new nonzero location completed basic use of MatSetValuesBlocked_SeqBAIJ_Inlined() by MatSetValuesBlocked_MPIBAIJ() to allow proper global indices being printed when error generated by new nonzero locations. Added inline version of MatSetValuesBlocked_SeqBAIJ() to be used by MatSetValuesBlocked_MPIBAIJ() to print error message for nonzero block with global indices ... List of files: /petsc/systems/Apple/OSX/bin/makeall Thu, 02 Apr 2015 14:12:37 +0000 Toby Isaac <tisaac@ices.utexas.edu> http://opengrok.phasta.colorado.edu:8080/source/history/petsc/systems/Apple/OSX/bin/makeall#898446f941de989eb59a155860a54be7cc14d054 Merge branch 'master' into shri/ts-is-for-differential-variablesConflicts: include/petsc-private/tsimpl.h src/ts/impls/eimex/eimex.c src/ts/interface/ts.c List of files: /petsc/systems/Apple/OSX/bin/makeall Wed, 11 Mar 2015 04:17:30 +0000 Shri Abhyankar <abhyshr@mcs.anl.gov> http://opengrok.phasta.colorado.edu:8080/source/history/petsc/systems/Apple/OSX/bin/makeall#f2dee214e9786e57c32a0a7e0b16d5e8ff4abb42 Merge branch 'master' into jed/chemNote merging a branch with good stuff in it for a year and a half is insane!Conflicts: src/ts/examples/tutorials/makefile src/ts/interface/ts.c List of files: /petsc/systems/Apple/OSX/bin/makeall Fri, 06 Mar 2015 00:10:44 +0000 Barry Smith <bsmith@mcs.anl.gov> http://opengrok.phasta.colorado.edu:8080/source/history/petsc/systems/Apple/OSX/bin/makeall#a197972ac2354be954b7aae623d40f6de50a3e72 Merge branch 'master' into barry/saws-options-merge-masterTotally confusing manual merge, could be wrongConflicts: include/petscoptions.h src/dm/impls/da/dacreate.c src/sys/objects/aoptions.c src/sys/threadcomm/interface/threadcomm.c List of files: /petsc/systems/Apple/OSX/bin/makeall Wed, 11 Feb 2015 21:58:15 +0000 Barry Smith <bsmith@mcs.anl.gov> http://opengrok.phasta.colorado.edu:8080/source/history/petsc/systems/Apple/OSX/bin/makeall#5070577325e1232aef37d5e5c67a58c4178cd37f Merge branch 'master' into pr252/dmay/PetscViewerBinarySkipHeaderVecViewLoadManual merge of makefileConflicts: src/sys/classes/viewer/examples/tutorials/makefile List of files: /petsc/systems/Apple/OSX/bin/makeall Tue, 10 Feb 2015 02:59:16 +0000 Barry Smith <bsmith@mcs.anl.gov> http://opengrok.phasta.colorado.edu:8080/source/history/petsc/systems/Apple/OSX/bin/makeall#909a08a465b1d1e590479744cf0e80556843dde1 Merge branch 'master' into mlange/refactor-plex-distributeConflicts: src/dm/impls/plex/examples/tests/output/ex12_1.out src/dm/impls/plex/examples/tests/output/ex12_2.out List of files: /petsc/systems/Apple/OSX/bin/makeall Fri, 28 Nov 2014 09:34:42 +0000 Michael Lange <michael.lange@imperial.ac.uk> http://opengrok.phasta.colorado.edu:8080/source/history/petsc/systems/Apple/OSX/bin/makeall#f66eea085cceefc5191b4b3d61f096e7c3d8e689 some updates for building Apple installers List of files: /petsc/systems/Apple/OSX/bin/makeall Fri, 14 Nov 2014 19:44:38 +0000 Barry Smith <bsmith@mcs.anl.gov> http://opengrok.phasta.colorado.edu:8080/source/history/petsc/systems/Apple/OSX/bin/makeall#6187e55b7be868de3dab288e5aecadaea4c1b258 updates for iOS 8.0 List of files: /petsc/systems/Apple/OSX/bin/makeall Sun, 19 Oct 2014 00:27:09 +0000 Barry Smith <bsmith@mcs.anl.gov> http://opengrok.phasta.colorado.edu:8080/source/history/petsc/systems/Apple/OSX/bin/makeall#b486a86aa3d2f09cd1a3c60948f7df67fba59fb3 Merge branch 'master' into knepley/fix-configure-petsc-dep* master: (210 commits) error out on special cases where DMLocalToGlobal_DA won't work remove unneed uses of local DM vectors and DMLocalToGlobalBegin/End in examples removed to prevent cut and paste repeats of their use openmpi: update to version 1.8.3 added more movies and pubs more movies MatGetDiagonalBlock() can be called before matrix is assembled added a couple more movies/images PetscLogEventGetId() was missing public prototype simply output from make streams benchmark test c2html: fixup so that C2HTML make variable is set [similar to cmake.py] chaco: current blas test does'nt work with Cray CC [which automatically links with blas] and linux - where -lm needs to be listed explicitly. Switch the test to check if we are using PETSc modifled chaco builddist: always install c2html/sowing argonne logo for users manual cover Remove PETSC_HAVE_CUSP_SMOOTHED_AGGREGATION, use PETSC_HAVE_CUSP instead. mpich: use older tarball with cygwin/gnu compilers updated information about packages PETSc can use in users manual Updated users manual to latest ANL Report format requirements mpich: update to mpich-3.1.3.tar.gz - remove -download-mpich-mpe [mpich no longer packages mpe] - remove -download-mpich-shared. It was added as a split from --with-mpi-shared to --known-mpi-shared and --download-mpich-shared in 50237a55163f90ac7341b723c6422dfa1dbce792 removing this gives back the control of shared=0/1 to package.py - remove download_solaris as the new tarball works with both gcov and on solaris - remove MPICHInstall() [and use GNUPackage.Install()] as the new tarball fixes 'make clean' requiring sudo added more images and PETSc pubs Doc: More refs ... List of files: /petsc/systems/Apple/OSX/bin/makeall Mon, 13 Oct 2014 14:38:56 +0000 Matthew G. Knepley <knepley@gmail.com> http://opengrok.phasta.colorado.edu:8080/source/history/petsc/systems/Apple/OSX/bin/makeall#42cfbcdf07a415b973c670db0915a1d194f7888e Merge branch 'maint'Conflicts: config/BuildSystem/config/packages/MPI.py List of files: /petsc/systems/Apple/OSX/bin/makeall Sat, 04 Oct 2014 15:40:23 +0000 Barry Smith <bsmith@mcs.anl.gov> http://opengrok.phasta.colorado.edu:8080/source/history/petsc/systems/Apple/OSX/bin/makeall#2e826d6f168293946e7dc17f87075462a7cd4791 explicitly turn off MPICH shared libraries in its configure if requested by userfix message for Apple XOS framework built by user List of files: /petsc/systems/Apple/OSX/bin/makeall Fri, 03 Oct 2014 22:29:28 +0000 Barry Smith <bsmith@mcs.anl.gov> http://opengrok.phasta.colorado.edu:8080/source/history/petsc/systems/Apple/OSX/bin/makeall#609885f52624dc498c55aeb0f5f78335ffdea32c Merge branch 'stefano_zampini/pcbddc-primalfixes' into stefano_zampini/pcbddc_deluxe List of files: /petsc/systems/Apple/OSX/bin/makeall Sun, 13 Jul 2014 11:29:36 +0000 Stefano Zampini <stefano.zampini@gmail.com> http://opengrok.phasta.colorado.edu:8080/source/history/petsc/systems/Apple/OSX/bin/makeall#f446f392102c0f27660ee53eeef34b565ec92c19 Merge branch 'maint' List of files: /petsc/systems/Apple/OSX/bin/makeall Wed, 02 Jul 2014 02:29:27 +0000 Barry Smith <bsmith@mcs.anl.gov> http://opengrok.phasta.colorado.edu:8080/source/history/petsc/systems/Apple/OSX/bin/makeall#0568d0aaac5e647431f3eb4138c458c9ba56f430 Merge branch 'barry/fix-ios' into maint List of files: /petsc/systems/Apple/OSX/bin/makeall Wed, 02 Jul 2014 02:22:33 +0000 Barry Smith <bsmith@mcs.anl.gov>