xref: /petsc/src/sys/memory/mtr.c (revision 5c25fcd7c4e1ecb15ec7a0829572c7e72f90b2d9)
17d0a6c19SBarry Smith 
2e5c89e4eSSatish Balay /*
3e5c89e4eSSatish Balay      Interface to malloc() and free(). This code allows for
4e5c89e4eSSatish Balay   logging of memory usage and some error checking
5e5c89e4eSSatish Balay */
6c6db04a5SJed Brown #include <petscsys.h>           /*I "petscsys.h" I*/
7665c2dedSJed Brown #include <petscviewer.h>
8e5c89e4eSSatish Balay #if defined(PETSC_HAVE_MALLOC_H)
9e5c89e4eSSatish Balay #include <malloc.h>
10e5c89e4eSSatish Balay #endif
11e5c89e4eSSatish Balay 
12e5c89e4eSSatish Balay 
13e5c89e4eSSatish Balay /*
14e5c89e4eSSatish Balay      These are defined in mal.c and ensure that malloced space is PetscScalar aligned
15e5c89e4eSSatish Balay */
16efca3c55SSatish Balay extern PetscErrorCode  PetscMallocAlign(size_t,int,const char[],const char[],void**);
17efca3c55SSatish Balay extern PetscErrorCode  PetscFreeAlign(void*,int,const char[],const char[]);
18efca3c55SSatish Balay extern PetscErrorCode  PetscTrMallocDefault(size_t,int,const char[],const char[],void**);
19efca3c55SSatish Balay extern PetscErrorCode  PetscTrFreeDefault(void*,int,const char[],const char[]);
20e5c89e4eSSatish Balay 
21e5c89e4eSSatish Balay 
220700a824SBarry Smith #define CLASSID_VALUE   ((PetscClassId) 0xf0e0d0c9)
230700a824SBarry Smith #define ALREADY_FREED  ((PetscClassId) 0x0f0e0d9c)
24e5c89e4eSSatish Balay 
25e5c89e4eSSatish Balay typedef struct _trSPACE {
26e5c89e4eSSatish Balay   size_t       size;
27e5c89e4eSSatish Balay   int          id;
28e5c89e4eSSatish Balay   int          lineno;
29e5c89e4eSSatish Balay   const char   *filename;
30e5c89e4eSSatish Balay   const char   *functionname;
310700a824SBarry Smith   PetscClassId classid;
328bf1f09cSShri Abhyankar #if defined(PETSC_USE_DEBUG)
33e5c89e4eSSatish Balay   PetscStack   stack;
34e5c89e4eSSatish Balay #endif
35e5c89e4eSSatish Balay   struct _trSPACE *next,*prev;
36e5c89e4eSSatish Balay } TRSPACE;
37e5c89e4eSSatish Balay 
3825b53cc9SJed Brown /* HEADER_BYTES is the number of bytes in a PetscMalloc() header.
3925b53cc9SJed Brown    It is sizeof(TRSPACE) padded to be a multiple of PETSC_MEMALIGN.
4025b53cc9SJed Brown */
41e5c89e4eSSatish Balay 
42a64a8e02SBarry Smith #define HEADER_BYTES      ((sizeof(TRSPACE)+(PETSC_MEMALIGN-1)) & ~(PETSC_MEMALIGN-1))
43e5c89e4eSSatish Balay 
44e5c89e4eSSatish Balay 
4525b53cc9SJed Brown /* This union is used to insure that the block passed to the user retains
4625b53cc9SJed Brown    a minimum alignment of PETSC_MEMALIGN.
4725b53cc9SJed Brown */
48e5c89e4eSSatish Balay typedef union {
49e5c89e4eSSatish Balay   TRSPACE sp;
5025b53cc9SJed Brown   char    v[HEADER_BYTES];
51e5c89e4eSSatish Balay } TrSPACE;
52e5c89e4eSSatish Balay 
53b022a5c1SBarry Smith 
54e5c89e4eSSatish Balay static size_t    TRallocated  = 0;
55e5c89e4eSSatish Balay static int       TRfrags      = 0;
56e5c89e4eSSatish Balay static TRSPACE   *TRhead      = 0;
57e5c89e4eSSatish Balay static int       TRid         = 0;
58ace3abfcSBarry Smith static PetscBool TRdebugLevel = PETSC_FALSE;
59e5c89e4eSSatish Balay static size_t    TRMaxMem     = 0;
60e5c89e4eSSatish Balay /*
61e5c89e4eSSatish Balay       Arrays to log information on all Mallocs
62e5c89e4eSSatish Balay */
63e5c89e4eSSatish Balay static int        PetscLogMallocMax       = 10000,PetscLogMalloc = -1;
64574034a9SJed Brown static size_t     PetscLogMallocThreshold = 0;
65e5c89e4eSSatish Balay static size_t     *PetscLogMallocLength;
66efca3c55SSatish Balay static const char **PetscLogMallocFile,**PetscLogMallocFunction;
67e5c89e4eSSatish Balay 
68e5c89e4eSSatish Balay #undef __FUNCT__
69b022a5c1SBarry Smith #define __FUNCT__ "PetscSetUseTrMalloc_Private"
70b022a5c1SBarry Smith PetscErrorCode PetscSetUseTrMalloc_Private(void)
71b022a5c1SBarry Smith {
72b022a5c1SBarry Smith   PetscErrorCode ierr;
73b022a5c1SBarry Smith 
74b022a5c1SBarry Smith   PetscFunctionBegin;
75b022a5c1SBarry Smith   ierr = PetscMallocSet(PetscTrMallocDefault,PetscTrFreeDefault);CHKERRQ(ierr);
76a297a907SKarl Rupp 
77b022a5c1SBarry Smith   TRallocated       = 0;
78b022a5c1SBarry Smith   TRfrags           = 0;
79b022a5c1SBarry Smith   TRhead            = 0;
80b022a5c1SBarry Smith   TRid              = 0;
81b022a5c1SBarry Smith   TRdebugLevel      = PETSC_FALSE;
82b022a5c1SBarry Smith   TRMaxMem          = 0;
83b022a5c1SBarry Smith   PetscLogMallocMax = 10000;
84b022a5c1SBarry Smith   PetscLogMalloc    = -1;
85b022a5c1SBarry Smith   PetscFunctionReturn(0);
86b022a5c1SBarry Smith }
87b022a5c1SBarry Smith 
88b022a5c1SBarry Smith #undef __FUNCT__
89e5c89e4eSSatish Balay #define __FUNCT__ "PetscMallocValidate"
90e5c89e4eSSatish Balay /*@C
91e5c89e4eSSatish Balay    PetscMallocValidate - Test the memory for corruption.  This can be used to
92e5c89e4eSSatish Balay    check for memory overwrites.
93e5c89e4eSSatish Balay 
94e5c89e4eSSatish Balay    Input Parameter:
95e5c89e4eSSatish Balay +  line - line number where call originated.
96e5c89e4eSSatish Balay .  function - name of function calling
97efca3c55SSatish Balay -  file - file where function is
98e5c89e4eSSatish Balay 
99e5c89e4eSSatish Balay    Return value:
100e5c89e4eSSatish Balay    The number of errors detected.
101e5c89e4eSSatish Balay 
102e5c89e4eSSatish Balay    Output Effect:
103e5c89e4eSSatish Balay    Error messages are written to stdout.
104e5c89e4eSSatish Balay 
105e5c89e4eSSatish Balay    Level: advanced
106e5c89e4eSSatish Balay 
107e5c89e4eSSatish Balay    Notes:
108e5c89e4eSSatish Balay     You should generally use CHKMEMQ as a short cut for calling this
109e5c89e4eSSatish Balay     routine.
110e5c89e4eSSatish Balay 
111efca3c55SSatish Balay     The line, function, file are given by the C preprocessor as
112efca3c55SSatish Balay     __LINE__, __FUNCT__, __FILE__
113e5c89e4eSSatish Balay 
114e5c89e4eSSatish Balay     The Fortran calling sequence is simply PetscMallocValidate(ierr)
115e5c89e4eSSatish Balay 
116e5c89e4eSSatish Balay    No output is generated if there are no problems detected.
117e5c89e4eSSatish Balay 
118e5c89e4eSSatish Balay .seealso: CHKMEMQ
119e5c89e4eSSatish Balay 
120e5c89e4eSSatish Balay @*/
121efca3c55SSatish Balay PetscErrorCode  PetscMallocValidate(int line,const char function[],const char file[])
122e5c89e4eSSatish Balay {
1236c093d5bSvictor   TRSPACE      *head,*lasthead;
124e5c89e4eSSatish Balay   char         *a;
1250700a824SBarry Smith   PetscClassId *nend;
126e5c89e4eSSatish Balay 
127e5c89e4eSSatish Balay   PetscFunctionBegin;
1286c093d5bSvictor   head = TRhead; lasthead = NULL;
129e5c89e4eSSatish Balay   while (head) {
1300700a824SBarry Smith     if (head->classid != CLASSID_VALUE) {
131efca3c55SSatish Balay       (*PetscErrorPrintf)("PetscMallocValidate: error detected at  %s() line %d in %s\n",function,line,file);
132e5c89e4eSSatish Balay       (*PetscErrorPrintf)("Memory at address %p is corrupted\n",head);
133e5c89e4eSSatish Balay       (*PetscErrorPrintf)("Probably write past beginning or end of array\n");
134efca3c55SSatish Balay       if (lasthead) (*PetscErrorPrintf)("Last intact block allocated in %s() line %d in %s\n",lasthead->functionname,lasthead->lineno,lasthead->filename);
135e32f2f54SBarry Smith       SETERRQ(PETSC_COMM_SELF,PETSC_ERR_MEMC," ");
136e5c89e4eSSatish Balay     }
137e5c89e4eSSatish Balay     a    = (char*)(((TrSPACE*)head) + 1);
1380700a824SBarry Smith     nend = (PetscClassId*)(a + head->size);
1390700a824SBarry Smith     if (*nend != CLASSID_VALUE) {
140efca3c55SSatish Balay       (*PetscErrorPrintf)("PetscMallocValidate: error detected at %s() line %d in %s\n",function,line,file);
141e5c89e4eSSatish Balay       if (*nend == ALREADY_FREED) {
142e5c89e4eSSatish Balay         (*PetscErrorPrintf)("Memory [id=%d(%.0f)] at address %p already freed\n",head->id,(PetscLogDouble)head->size,a);
143e32f2f54SBarry Smith         SETERRQ(PETSC_COMM_SELF,PETSC_ERR_MEMC," ");
144e5c89e4eSSatish Balay       } else {
145e5c89e4eSSatish Balay         (*PetscErrorPrintf)("Memory [id=%d(%.0f)] at address %p is corrupted (probably write past end of array)\n",head->id,(PetscLogDouble)head->size,a);
146efca3c55SSatish Balay         (*PetscErrorPrintf)("Memory originally allocated in %s() line %d in %s\n",head->functionname,head->lineno,head->filename);
147e32f2f54SBarry Smith         SETERRQ(PETSC_COMM_SELF,PETSC_ERR_MEMC," ");
148e5c89e4eSSatish Balay       }
149e5c89e4eSSatish Balay     }
1506c093d5bSvictor     lasthead = head;
151e5c89e4eSSatish Balay     head     = head->next;
152e5c89e4eSSatish Balay   }
153e5c89e4eSSatish Balay   PetscFunctionReturn(0);
154e5c89e4eSSatish Balay }
155e5c89e4eSSatish Balay 
156e5c89e4eSSatish Balay #undef __FUNCT__
157e5c89e4eSSatish Balay #define __FUNCT__ "PetscTrMallocDefault"
158e5c89e4eSSatish Balay /*
159e5c89e4eSSatish Balay     PetscTrMallocDefault - Malloc with tracing.
160e5c89e4eSSatish Balay 
161e5c89e4eSSatish Balay     Input Parameters:
162e5c89e4eSSatish Balay +   a   - number of bytes to allocate
163e5c89e4eSSatish Balay .   lineno - line number where used.  Use __LINE__ for this
164e5c89e4eSSatish Balay .   function - function calling routine. Use __FUNCT__ for this
165efca3c55SSatish Balay -   filename  - file name where used.  Use __FILE__ for this
166e5c89e4eSSatish Balay 
167e5c89e4eSSatish Balay     Returns:
168e5c89e4eSSatish Balay     double aligned pointer to requested storage, or null if not
169e5c89e4eSSatish Balay     available.
170e5c89e4eSSatish Balay  */
171efca3c55SSatish Balay PetscErrorCode  PetscTrMallocDefault(size_t a,int lineno,const char function[],const char filename[],void **result)
172e5c89e4eSSatish Balay {
173e5c89e4eSSatish Balay   TRSPACE        *head;
174e5c89e4eSSatish Balay   char           *inew;
175e5c89e4eSSatish Balay   size_t         nsize;
176e5c89e4eSSatish Balay   PetscErrorCode ierr;
177e5c89e4eSSatish Balay 
178e5c89e4eSSatish Balay   PetscFunctionBegin;
179e5c89e4eSSatish Balay   if (TRdebugLevel) {
180efca3c55SSatish Balay     ierr = PetscMallocValidate(lineno,function,filename); if (ierr) PetscFunctionReturn(ierr);
181e5c89e4eSSatish Balay   }
182e5c89e4eSSatish Balay 
18325b53cc9SJed Brown   nsize = (a + (PETSC_MEMALIGN-1)) & ~(PETSC_MEMALIGN-1);
184efca3c55SSatish Balay   ierr  = PetscMallocAlign(nsize+sizeof(TrSPACE)+sizeof(PetscClassId),lineno,function,filename,(void**)&inew);CHKERRQ(ierr);
185e5c89e4eSSatish Balay 
186e5c89e4eSSatish Balay   head  = (TRSPACE*)inew;
187e5c89e4eSSatish Balay   inew += sizeof(TrSPACE);
188e5c89e4eSSatish Balay 
189e5c89e4eSSatish Balay   if (TRhead) TRhead->prev = head;
190e5c89e4eSSatish Balay   head->next   = TRhead;
191e5c89e4eSSatish Balay   TRhead       = head;
192e5c89e4eSSatish Balay   head->prev   = 0;
193e5c89e4eSSatish Balay   head->size   = nsize;
194e5c89e4eSSatish Balay   head->id     = TRid;
195e5c89e4eSSatish Balay   head->lineno = lineno;
196e5c89e4eSSatish Balay 
197e5c89e4eSSatish Balay   head->filename                 = filename;
198e5c89e4eSSatish Balay   head->functionname             = function;
1990700a824SBarry Smith   head->classid                  = CLASSID_VALUE;
2000700a824SBarry Smith   *(PetscClassId*)(inew + nsize) = CLASSID_VALUE;
201e5c89e4eSSatish Balay 
202e5c89e4eSSatish Balay   TRallocated += nsize;
203a297a907SKarl Rupp   if (TRallocated > TRMaxMem) TRMaxMem = TRallocated;
204e5c89e4eSSatish Balay   TRfrags++;
205e5c89e4eSSatish Balay 
2068bf1f09cSShri Abhyankar #if defined(PETSC_USE_DEBUG)
20776386721SLisandro Dalcin   if (PetscStackActive()) {
208*5c25fcd7SBarry Smith     ierr = PetscStackCopy(petscstack,&head->stack);CHKERRQ(ierr);
2092c9581d2SBarry Smith     /* fix the line number to where the malloc() was called, not the PetscFunctionBegin; */
2102c9581d2SBarry Smith     head->stack.line[head->stack.currentsize-2] = lineno;
21176386721SLisandro Dalcin   }
212e5c89e4eSSatish Balay #endif
213e5c89e4eSSatish Balay 
214e5c89e4eSSatish Balay   /*
215e5c89e4eSSatish Balay          Allow logging of all mallocs made
216e5c89e4eSSatish Balay   */
217574034a9SJed Brown   if (PetscLogMalloc > -1 && PetscLogMalloc < PetscLogMallocMax && a >= PetscLogMallocThreshold) {
218e5c89e4eSSatish Balay     if (!PetscLogMalloc) {
219e5c89e4eSSatish Balay       PetscLogMallocLength = (size_t*)malloc(PetscLogMallocMax*sizeof(size_t));
220e32f2f54SBarry Smith       if (!PetscLogMallocLength) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_MEM," ");
221a297a907SKarl Rupp 
222a2ea699eSBarry Smith       PetscLogMallocFile = (const char**)malloc(PetscLogMallocMax*sizeof(char*));
223e32f2f54SBarry Smith       if (!PetscLogMallocFile) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_MEM," ");
224a297a907SKarl Rupp 
225a2ea699eSBarry Smith       PetscLogMallocFunction = (const char**)malloc(PetscLogMallocMax*sizeof(char*));
226e32f2f54SBarry Smith       if (!PetscLogMallocFunction) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_MEM," ");
227e5c89e4eSSatish Balay     }
228e5c89e4eSSatish Balay     PetscLogMallocLength[PetscLogMalloc]     = nsize;
229e5c89e4eSSatish Balay     PetscLogMallocFile[PetscLogMalloc]       = filename;
230e5c89e4eSSatish Balay     PetscLogMallocFunction[PetscLogMalloc++] = function;
231e5c89e4eSSatish Balay   }
232e5c89e4eSSatish Balay   *result = (void*)inew;
233e5c89e4eSSatish Balay   PetscFunctionReturn(0);
234e5c89e4eSSatish Balay }
235e5c89e4eSSatish Balay 
236e5c89e4eSSatish Balay 
237e5c89e4eSSatish Balay #undef __FUNCT__
238e5c89e4eSSatish Balay #define __FUNCT__ "PetscTrFreeDefault"
239e5c89e4eSSatish Balay /*
240e5c89e4eSSatish Balay    PetscTrFreeDefault - Free with tracing.
241e5c89e4eSSatish Balay 
242e5c89e4eSSatish Balay    Input Parameters:
243e5c89e4eSSatish Balay .   a    - pointer to a block allocated with PetscTrMalloc
244e5c89e4eSSatish Balay .   lineno - line number where used.  Use __LINE__ for this
245e5c89e4eSSatish Balay .   function - function calling routine. Use __FUNCT__ for this
246e5c89e4eSSatish Balay .   file  - file name where used.  Use __FILE__ for this
247e5c89e4eSSatish Balay  */
248efca3c55SSatish Balay PetscErrorCode  PetscTrFreeDefault(void *aa,int line,const char function[],const char file[])
249e5c89e4eSSatish Balay {
250e5c89e4eSSatish Balay   char           *a = (char*)aa;
251e5c89e4eSSatish Balay   TRSPACE        *head;
252e5c89e4eSSatish Balay   char           *ahead;
253e5c89e4eSSatish Balay   PetscErrorCode ierr;
2540700a824SBarry Smith   PetscClassId   *nend;
255e5c89e4eSSatish Balay 
256e5c89e4eSSatish Balay   PetscFunctionBegin;
257e5c89e4eSSatish Balay   /* Do not try to handle empty blocks */
25849d7da52SJed Brown   if (!a) PetscFunctionReturn(0);
259e5c89e4eSSatish Balay 
260e5c89e4eSSatish Balay   if (TRdebugLevel) {
261efca3c55SSatish Balay     ierr = PetscMallocValidate(line,function,file);CHKERRQ(ierr);
262e5c89e4eSSatish Balay   }
263e5c89e4eSSatish Balay 
264e5c89e4eSSatish Balay   ahead = a;
265e5c89e4eSSatish Balay   a     = a - sizeof(TrSPACE);
266e5c89e4eSSatish Balay   head  = (TRSPACE*)a;
267e5c89e4eSSatish Balay 
2680700a824SBarry Smith   if (head->classid != CLASSID_VALUE) {
269efca3c55SSatish Balay     (*PetscErrorPrintf)("PetscTrFreeDefault() called from %s() line %d in %s\n",function,line,file);
270e5c89e4eSSatish Balay     (*PetscErrorPrintf)("Block at address %p is corrupted; cannot free;\nmay be block not allocated with PetscMalloc()\n",a);
271e32f2f54SBarry Smith     SETERRQ(PETSC_COMM_SELF,PETSC_ERR_MEMC,"Bad location or corrupted memory");
272e5c89e4eSSatish Balay   }
2730700a824SBarry Smith   nend = (PetscClassId*)(ahead + head->size);
2740700a824SBarry Smith   if (*nend != CLASSID_VALUE) {
275e5c89e4eSSatish Balay     if (*nend == ALREADY_FREED) {
276efca3c55SSatish Balay       (*PetscErrorPrintf)("PetscTrFreeDefault() called from %s() line %d in %s\n",function,line,file);
277e5c89e4eSSatish Balay       (*PetscErrorPrintf)("Block [id=%d(%.0f)] at address %p was already freed\n",head->id,(PetscLogDouble)head->size,a + sizeof(TrSPACE));
278e5c89e4eSSatish Balay       if (head->lineno > 0 && head->lineno < 50000 /* sanity check */) {
279efca3c55SSatish Balay         (*PetscErrorPrintf)("Block freed in %s() line %d in %s\n",head->functionname,head->lineno,head->filename);
280e5c89e4eSSatish Balay       } else {
281efca3c55SSatish Balay         (*PetscErrorPrintf)("Block allocated in %s() line %d in %s\n",head->functionname,-head->lineno,head->filename);
282e5c89e4eSSatish Balay       }
283e32f2f54SBarry Smith       SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"Memory already freed");
284e5c89e4eSSatish Balay     } else {
285e5c89e4eSSatish Balay       /* Damaged tail */
286efca3c55SSatish Balay       (*PetscErrorPrintf)("PetscTrFreeDefault() called from %s() line %d in %s\n",function,line,file);
287e5c89e4eSSatish Balay       (*PetscErrorPrintf)("Block [id=%d(%.0f)] at address %p is corrupted (probably write past end of array)\n",head->id,(PetscLogDouble)head->size,a);
288efca3c55SSatish Balay       (*PetscErrorPrintf)("Block allocated in %s() line %d in %s\n",head->functionname,head->lineno,head->filename);
289e32f2f54SBarry Smith       SETERRQ(PETSC_COMM_SELF,PETSC_ERR_MEMC,"Corrupted memory");
290e5c89e4eSSatish Balay     }
291e5c89e4eSSatish Balay   }
292e5c89e4eSSatish Balay   /* Mark the location freed */
293e5c89e4eSSatish Balay   *nend = ALREADY_FREED;
294e5c89e4eSSatish Balay   /* Save location where freed.  If we suspect the line number, mark as  allocated location */
295e5c89e4eSSatish Balay   if (line > 0 && line < 50000) {
296e5c89e4eSSatish Balay     head->lineno       = line;
297e5c89e4eSSatish Balay     head->filename     = file;
298e5c89e4eSSatish Balay     head->functionname = function;
299e5c89e4eSSatish Balay   } else {
300e5c89e4eSSatish Balay     head->lineno = -head->lineno;
301e5c89e4eSSatish Balay   }
302e5c89e4eSSatish Balay   /* zero out memory - helps to find some reuse of already freed memory */
303e5c89e4eSSatish Balay   ierr = PetscMemzero(aa,head->size);CHKERRQ(ierr);
304e5c89e4eSSatish Balay 
305e5c89e4eSSatish Balay   TRallocated -= head->size;
306e5c89e4eSSatish Balay   TRfrags--;
307e5c89e4eSSatish Balay   if (head->prev) head->prev->next = head->next;
308e5c89e4eSSatish Balay   else TRhead = head->next;
309e5c89e4eSSatish Balay 
310e5c89e4eSSatish Balay   if (head->next) head->next->prev = head->prev;
311efca3c55SSatish Balay   ierr = PetscFreeAlign(a,line,function,file);CHKERRQ(ierr);
312e5c89e4eSSatish Balay   PetscFunctionReturn(0);
313e5c89e4eSSatish Balay }
314e5c89e4eSSatish Balay 
315e5c89e4eSSatish Balay 
316e5c89e4eSSatish Balay #undef __FUNCT__
317e5c89e4eSSatish Balay #define __FUNCT__ "PetscMemoryShowUsage"
318fe7fb379SMatthew Knepley /*@C
319e5c89e4eSSatish Balay     PetscMemoryShowUsage - Shows the amount of memory currently being used
320e5c89e4eSSatish Balay         in a communicator.
321e5c89e4eSSatish Balay 
322e5c89e4eSSatish Balay     Collective on PetscViewer
323e5c89e4eSSatish Balay 
324e5c89e4eSSatish Balay     Input Parameter:
325e5c89e4eSSatish Balay +    viewer - the viewer that defines the communicator
326e5c89e4eSSatish Balay -    message - string printed before values
327e5c89e4eSSatish Balay 
328e5c89e4eSSatish Balay     Level: intermediate
329e5c89e4eSSatish Balay 
330e5c89e4eSSatish Balay     Concepts: memory usage
331e5c89e4eSSatish Balay 
3321bb97394SVictor Eijkhout .seealso: PetscMallocDump(), PetscMemoryGetCurrentUsage()
333e5c89e4eSSatish Balay  @*/
3347087cfbeSBarry Smith PetscErrorCode  PetscMemoryShowUsage(PetscViewer viewer,const char message[])
335e5c89e4eSSatish Balay {
336e5c89e4eSSatish Balay   PetscLogDouble allocated,maximum,resident,residentmax;
337e5c89e4eSSatish Balay   PetscErrorCode ierr;
338e5c89e4eSSatish Balay   PetscMPIInt    rank;
339e5c89e4eSSatish Balay   MPI_Comm       comm;
340e5c89e4eSSatish Balay 
341e5c89e4eSSatish Balay   PetscFunctionBegin;
342e5c89e4eSSatish Balay   if (!viewer) viewer = PETSC_VIEWER_STDOUT_WORLD;
343e5c89e4eSSatish Balay   ierr = PetscMallocGetCurrentUsage(&allocated);CHKERRQ(ierr);
344e5c89e4eSSatish Balay   ierr = PetscMallocGetMaximumUsage(&maximum);CHKERRQ(ierr);
345e5c89e4eSSatish Balay   ierr = PetscMemoryGetCurrentUsage(&resident);CHKERRQ(ierr);
346e5c89e4eSSatish Balay   ierr = PetscMemoryGetMaximumUsage(&residentmax);CHKERRQ(ierr);
347e5c89e4eSSatish Balay   if (residentmax > 0) residentmax = PetscMax(resident,residentmax);
348e5c89e4eSSatish Balay   ierr = PetscObjectGetComm((PetscObject)viewer,&comm);CHKERRQ(ierr);
349e5c89e4eSSatish Balay   ierr = MPI_Comm_rank(comm,&rank);CHKERRQ(ierr);
350e5c89e4eSSatish Balay   ierr = PetscViewerASCIIPrintf(viewer,message);CHKERRQ(ierr);
3517b23a99aSBarry Smith   ierr = PetscViewerASCIISynchronizedAllow(viewer,PETSC_TRUE);CHKERRQ(ierr);
352e5c89e4eSSatish Balay   if (resident && residentmax && allocated) {
353e5c89e4eSSatish Balay     ierr = PetscViewerASCIISynchronizedPrintf(viewer,"[%d]Current space PetscMalloc()ed %g, max space PetscMalloced() %g\n[%d]Current process memory %g max process memory %g\n",rank,allocated,maximum,rank,resident,residentmax);CHKERRQ(ierr);
354e5c89e4eSSatish Balay   } else if (resident && residentmax) {
355e5c89e4eSSatish Balay     ierr = PetscViewerASCIISynchronizedPrintf(viewer,"[%d]Run with -malloc to get statistics on PetscMalloc() calls\n[%d]Current process memory %g max process memory %g\n",rank,rank,resident,residentmax);CHKERRQ(ierr);
356e5c89e4eSSatish Balay   } else if (resident && allocated) {
357e5c89e4eSSatish Balay     ierr = PetscViewerASCIISynchronizedPrintf(viewer,"[%d]Current space PetscMalloc()ed %g, max space PetscMalloced() %g\n[%d]Current process memory %g, run with -memory_info to get max memory usage\n",rank,allocated,maximum,rank,resident);CHKERRQ(ierr);
358e5c89e4eSSatish Balay   } else if (allocated) {
359e5c89e4eSSatish Balay     ierr = PetscViewerASCIISynchronizedPrintf(viewer,"[%d]Current space PetscMalloc()ed %g, max space PetscMalloced() %g\n[%d]OS cannot compute process memory\n",rank,allocated,maximum,rank);CHKERRQ(ierr);
360e5c89e4eSSatish Balay   } else {
361e5c89e4eSSatish Balay     ierr = PetscViewerASCIIPrintf(viewer,"Run with -malloc to get statistics on PetscMalloc() calls\nOS cannot compute process memory\n");CHKERRQ(ierr);
362e5c89e4eSSatish Balay   }
363e5c89e4eSSatish Balay   ierr = PetscViewerFlush(viewer);CHKERRQ(ierr);
3647b23a99aSBarry Smith   ierr = PetscViewerASCIISynchronizedAllow(viewer,PETSC_FALSE);CHKERRQ(ierr);
365e5c89e4eSSatish Balay   PetscFunctionReturn(0);
366e5c89e4eSSatish Balay }
367e5c89e4eSSatish Balay 
368e5c89e4eSSatish Balay #undef __FUNCT__
369e5c89e4eSSatish Balay #define __FUNCT__ "PetscMallocGetCurrentUsage"
370e5c89e4eSSatish Balay /*@C
371e5c89e4eSSatish Balay     PetscMallocGetCurrentUsage - gets the current amount of memory used that was PetscMalloc()ed
372e5c89e4eSSatish Balay 
373e5c89e4eSSatish Balay     Not Collective
374e5c89e4eSSatish Balay 
375e5c89e4eSSatish Balay     Output Parameters:
376e5c89e4eSSatish Balay .   space - number of bytes currently allocated
377e5c89e4eSSatish Balay 
378e5c89e4eSSatish Balay     Level: intermediate
379e5c89e4eSSatish Balay 
380e5c89e4eSSatish Balay     Concepts: memory usage
381e5c89e4eSSatish Balay 
382e5c89e4eSSatish Balay .seealso: PetscMallocDump(), PetscMallocDumpLog(), PetscMallocGetMaximumUsage(), PetscMemoryGetCurrentUsage(),
383e5c89e4eSSatish Balay           PetscMemoryGetMaximumUsage()
384e5c89e4eSSatish Balay  @*/
3857087cfbeSBarry Smith PetscErrorCode  PetscMallocGetCurrentUsage(PetscLogDouble *space)
386e5c89e4eSSatish Balay {
387e5c89e4eSSatish Balay   PetscFunctionBegin;
388e5c89e4eSSatish Balay   *space = (PetscLogDouble) TRallocated;
389e5c89e4eSSatish Balay   PetscFunctionReturn(0);
390e5c89e4eSSatish Balay }
391e5c89e4eSSatish Balay 
392e5c89e4eSSatish Balay #undef __FUNCT__
393e5c89e4eSSatish Balay #define __FUNCT__ "PetscMallocGetMaximumUsage"
394e5c89e4eSSatish Balay /*@C
395e5c89e4eSSatish Balay     PetscMallocGetMaximumUsage - gets the maximum amount of memory used that was PetscMalloc()ed at any time
396e5c89e4eSSatish Balay         during this run.
397e5c89e4eSSatish Balay 
398e5c89e4eSSatish Balay     Not Collective
399e5c89e4eSSatish Balay 
400e5c89e4eSSatish Balay     Output Parameters:
401e5c89e4eSSatish Balay .   space - maximum number of bytes ever allocated at one time
402e5c89e4eSSatish Balay 
403e5c89e4eSSatish Balay     Level: intermediate
404e5c89e4eSSatish Balay 
405e5c89e4eSSatish Balay     Concepts: memory usage
406e5c89e4eSSatish Balay 
407e5c89e4eSSatish Balay .seealso: PetscMallocDump(), PetscMallocDumpLog(), PetscMallocGetMaximumUsage(), PetscMemoryGetCurrentUsage(),
408e5c89e4eSSatish Balay           PetscMemoryGetCurrentUsage()
409e5c89e4eSSatish Balay  @*/
4107087cfbeSBarry Smith PetscErrorCode  PetscMallocGetMaximumUsage(PetscLogDouble *space)
411e5c89e4eSSatish Balay {
412e5c89e4eSSatish Balay   PetscFunctionBegin;
413e5c89e4eSSatish Balay   *space = (PetscLogDouble) TRMaxMem;
414e5c89e4eSSatish Balay   PetscFunctionReturn(0);
415e5c89e4eSSatish Balay }
416e5c89e4eSSatish Balay 
417a64a8e02SBarry Smith #if defined(PETSC_USE_DEBUG)
418a64a8e02SBarry Smith #undef __FUNCT__
419a64a8e02SBarry Smith #define __FUNCT__ "PetscMallocGetStack"
420a64a8e02SBarry Smith /*@C
421a64a8e02SBarry Smith    PetscMallocGetStack - returns a pointer to the stack for the location in the program a call to PetscMalloc() was used to obtain that memory
422a64a8e02SBarry Smith 
423a64a8e02SBarry Smith    Collective on PETSC_COMM_WORLD
424a64a8e02SBarry Smith 
425a64a8e02SBarry Smith    Input Parameter:
426a64a8e02SBarry Smith .    ptr - the memory location
427a64a8e02SBarry Smith 
428a64a8e02SBarry Smith    Output Paramter:
429a64a8e02SBarry Smith .    stack - the stack indicating where the program allocated this memory
430a64a8e02SBarry Smith 
431a64a8e02SBarry Smith    Level: intermediate
432a64a8e02SBarry Smith 
433a64a8e02SBarry Smith .seealso:  PetscMallocGetCurrentUsage(), PetscMallocDumpLog()
434a64a8e02SBarry Smith @*/
435a64a8e02SBarry Smith PetscErrorCode  PetscMallocGetStack(void *ptr,PetscStack **stack)
436a64a8e02SBarry Smith {
437a64a8e02SBarry Smith   TRSPACE *head;
438a64a8e02SBarry Smith 
439a64a8e02SBarry Smith   PetscFunctionBegin;
440a64a8e02SBarry Smith   head   = (TRSPACE*) (((char*)ptr) - HEADER_BYTES);
441a64a8e02SBarry Smith   *stack = &head->stack;
442a64a8e02SBarry Smith   PetscFunctionReturn(0);
443a64a8e02SBarry Smith }
44476386721SLisandro Dalcin #else
44576386721SLisandro Dalcin #undef __FUNCT__
44676386721SLisandro Dalcin #define __FUNCT__ "PetscMallocGetStack"
44776386721SLisandro Dalcin PetscErrorCode  PetscMallocGetStack(void *ptr,void **stack)
44876386721SLisandro Dalcin {
44976386721SLisandro Dalcin   PetscFunctionBegin;
45076386721SLisandro Dalcin   *stack = 0;
45176386721SLisandro Dalcin   PetscFunctionReturn(0);
45276386721SLisandro Dalcin }
453a64a8e02SBarry Smith #endif
454a64a8e02SBarry Smith 
455e5c89e4eSSatish Balay #undef __FUNCT__
456e5c89e4eSSatish Balay #define __FUNCT__ "PetscMallocDump"
457e5c89e4eSSatish Balay /*@C
458e5c89e4eSSatish Balay    PetscMallocDump - Dumps the allocated memory blocks to a file. The information
459e5c89e4eSSatish Balay    printed is: size of space (in bytes), address of space, id of space,
460e5c89e4eSSatish Balay    file in which space was allocated, and line number at which it was
461e5c89e4eSSatish Balay    allocated.
462e5c89e4eSSatish Balay 
463e5c89e4eSSatish Balay    Collective on PETSC_COMM_WORLD
464e5c89e4eSSatish Balay 
465e5c89e4eSSatish Balay    Input Parameter:
466e5c89e4eSSatish Balay .  fp  - file pointer.  If fp is NULL, stdout is assumed.
467e5c89e4eSSatish Balay 
468e5c89e4eSSatish Balay    Options Database Key:
469e5c89e4eSSatish Balay .  -malloc_dump - Dumps unfreed memory during call to PetscFinalize()
470e5c89e4eSSatish Balay 
471e5c89e4eSSatish Balay    Level: intermediate
472e5c89e4eSSatish Balay 
473e5c89e4eSSatish Balay    Fortran Note:
474e5c89e4eSSatish Balay    The calling sequence in Fortran is PetscMallocDump(integer ierr)
475e5c89e4eSSatish Balay    The fp defaults to stdout.
476e5c89e4eSSatish Balay 
477e5c89e4eSSatish Balay    Notes: uses MPI_COMM_WORLD, because this may be called in PetscFinalize() after PETSC_COMM_WORLD
478e5c89e4eSSatish Balay           has been freed.
479e5c89e4eSSatish Balay 
480e5c89e4eSSatish Balay    Concepts: memory usage
481e5c89e4eSSatish Balay    Concepts: memory bleeding
482e5c89e4eSSatish Balay    Concepts: bleeding memory
483e5c89e4eSSatish Balay 
4849e9a1f8fSvictor .seealso:  PetscMallocGetCurrentUsage(), PetscMallocDumpLog()
485e5c89e4eSSatish Balay @*/
4867087cfbeSBarry Smith PetscErrorCode  PetscMallocDump(FILE *fp)
487e5c89e4eSSatish Balay {
488e5c89e4eSSatish Balay   TRSPACE        *head;
489e5c89e4eSSatish Balay   PetscErrorCode ierr;
490e5c89e4eSSatish Balay   PetscMPIInt    rank;
491e5c89e4eSSatish Balay 
492e5c89e4eSSatish Balay   PetscFunctionBegin;
493e5c89e4eSSatish Balay   ierr = MPI_Comm_rank(MPI_COMM_WORLD,&rank);CHKERRQ(ierr);
494da9f1d6bSBarry Smith   if (!fp) fp = PETSC_STDOUT;
495a297a907SKarl Rupp   if (TRallocated > 0) fprintf(fp,"[%d]Total space allocated %.0f bytes\n",rank,(PetscLogDouble)TRallocated);
496e5c89e4eSSatish Balay   head = TRhead;
497e5c89e4eSSatish Balay   while (head) {
498efca3c55SSatish Balay     fprintf(fp,"[%2d]%.0f bytes %s() line %d in %s\n",rank,(PetscLogDouble)head->size,head->functionname,head->lineno,head->filename);
4998bf1f09cSShri Abhyankar #if defined(PETSC_USE_DEBUG)
500e5c89e4eSSatish Balay     ierr = PetscStackPrint(&head->stack,fp);CHKERRQ(ierr);
501e5c89e4eSSatish Balay #endif
502e5c89e4eSSatish Balay     head = head->next;
503e5c89e4eSSatish Balay   }
504e5c89e4eSSatish Balay   PetscFunctionReturn(0);
505e5c89e4eSSatish Balay }
506e5c89e4eSSatish Balay 
507e5c89e4eSSatish Balay /* ---------------------------------------------------------------------------- */
508e5c89e4eSSatish Balay 
509e5c89e4eSSatish Balay #undef __FUNCT__
510e5c89e4eSSatish Balay #define __FUNCT__ "PetscMallocSetDumpLog"
511e5c89e4eSSatish Balay /*@C
512e5c89e4eSSatish Balay     PetscMallocSetDumpLog - Activates logging of all calls to PetscMalloc().
513e5c89e4eSSatish Balay 
514e5c89e4eSSatish Balay     Not Collective
515e5c89e4eSSatish Balay 
516e5c89e4eSSatish Balay     Options Database Key:
517574034a9SJed Brown +  -malloc_log <filename> - Activates PetscMallocDumpLog()
518574034a9SJed Brown -  -malloc_log_threshold <min> - Activates logging and sets a minimum size
519e5c89e4eSSatish Balay 
520e5c89e4eSSatish Balay     Level: advanced
521e5c89e4eSSatish Balay 
522574034a9SJed Brown .seealso: PetscMallocDump(), PetscMallocDumpLog(), PetscMallocSetDumpLogThreshold()
523e5c89e4eSSatish Balay @*/
5247087cfbeSBarry Smith PetscErrorCode PetscMallocSetDumpLog(void)
525e5c89e4eSSatish Balay {
52621b680ceSJed Brown   PetscErrorCode ierr;
52721b680ceSJed Brown 
528e5c89e4eSSatish Balay   PetscFunctionBegin;
529e5c89e4eSSatish Balay   PetscLogMalloc = 0;
530a297a907SKarl Rupp 
53121b680ceSJed Brown   ierr = PetscMemorySetGetMaximumUsage();CHKERRQ(ierr);
532e5c89e4eSSatish Balay   PetscFunctionReturn(0);
533e5c89e4eSSatish Balay }
534e5c89e4eSSatish Balay 
535e5c89e4eSSatish Balay #undef __FUNCT__
536574034a9SJed Brown #define __FUNCT__ "PetscMallocSetDumpLogThreshold"
537574034a9SJed Brown /*@C
538574034a9SJed Brown     PetscMallocSetDumpLogThreshold - Activates logging of all calls to PetscMalloc().
539574034a9SJed Brown 
540574034a9SJed Brown     Not Collective
541574034a9SJed Brown 
542574034a9SJed Brown     Input Arguments:
543574034a9SJed Brown .   logmin - minimum allocation size to log, or PETSC_DEFAULT
544574034a9SJed Brown 
545574034a9SJed Brown     Options Database Key:
546574034a9SJed Brown +  -malloc_log <filename> - Activates PetscMallocDumpLog()
547574034a9SJed Brown -  -malloc_log_threshold <min> - Activates logging and sets a minimum size
548574034a9SJed Brown 
549574034a9SJed Brown     Level: advanced
550574034a9SJed Brown 
551574034a9SJed Brown .seealso: PetscMallocDump(), PetscMallocDumpLog(), PetscMallocSetDumpLog()
552574034a9SJed Brown @*/
553574034a9SJed Brown PetscErrorCode PetscMallocSetDumpLogThreshold(PetscLogDouble logmin)
554574034a9SJed Brown {
555574034a9SJed Brown   PetscErrorCode ierr;
556574034a9SJed Brown 
557574034a9SJed Brown   PetscFunctionBegin;
558574034a9SJed Brown   ierr = PetscMallocSetDumpLog();CHKERRQ(ierr);
559574034a9SJed Brown   if (logmin < 0) logmin = 0.0; /* PETSC_DEFAULT or PETSC_DECIDE */
560574034a9SJed Brown   PetscLogMallocThreshold = (size_t)logmin;
561574034a9SJed Brown   PetscFunctionReturn(0);
562574034a9SJed Brown }
563574034a9SJed Brown 
564574034a9SJed Brown #undef __FUNCT__
56518a2528dSJed Brown #define __FUNCT__ "PetscMallocGetDumpLog"
56618a2528dSJed Brown /*@C
56718a2528dSJed Brown     PetscMallocGetDumpLog - Determine whether all calls to PetscMalloc() are being logged
56818a2528dSJed Brown 
56918a2528dSJed Brown     Not Collective
57018a2528dSJed Brown 
57118a2528dSJed Brown     Output Arguments
57218a2528dSJed Brown .   logging - PETSC_TRUE if logging is active
57318a2528dSJed Brown 
57418a2528dSJed Brown     Options Database Key:
57518a2528dSJed Brown .  -malloc_log - Activates PetscMallocDumpLog()
57618a2528dSJed Brown 
57718a2528dSJed Brown     Level: advanced
57818a2528dSJed Brown 
57918a2528dSJed Brown .seealso: PetscMallocDump(), PetscMallocDumpLog()
58018a2528dSJed Brown @*/
58118a2528dSJed Brown PetscErrorCode PetscMallocGetDumpLog(PetscBool *logging)
58218a2528dSJed Brown {
58318a2528dSJed Brown 
58418a2528dSJed Brown   PetscFunctionBegin;
58518a2528dSJed Brown   *logging = (PetscBool)(PetscLogMalloc >= 0);
58618a2528dSJed Brown   PetscFunctionReturn(0);
58718a2528dSJed Brown }
58818a2528dSJed Brown 
58918a2528dSJed Brown #undef __FUNCT__
590e5c89e4eSSatish Balay #define __FUNCT__ "PetscMallocDumpLog"
591e5c89e4eSSatish Balay /*@C
592e5c89e4eSSatish Balay     PetscMallocDumpLog - Dumps the log of all calls to PetscMalloc(); also calls
59321b680ceSJed Brown        PetscMemoryGetMaximumUsage()
594e5c89e4eSSatish Balay 
595e5c89e4eSSatish Balay     Collective on PETSC_COMM_WORLD
596e5c89e4eSSatish Balay 
597e5c89e4eSSatish Balay     Input Parameter:
5980298fd71SBarry Smith .   fp - file pointer; or NULL
599e5c89e4eSSatish Balay 
600e5c89e4eSSatish Balay     Options Database Key:
601e5c89e4eSSatish Balay .  -malloc_log - Activates PetscMallocDumpLog()
602e5c89e4eSSatish Balay 
603e5c89e4eSSatish Balay     Level: advanced
604e5c89e4eSSatish Balay 
605e5c89e4eSSatish Balay    Fortran Note:
606e5c89e4eSSatish Balay    The calling sequence in Fortran is PetscMallocDumpLog(integer ierr)
607e5c89e4eSSatish Balay    The fp defaults to stdout.
608e5c89e4eSSatish Balay 
609e5c89e4eSSatish Balay .seealso: PetscMallocGetCurrentUsage(), PetscMallocDump(), PetscMallocSetDumpLog()
610e5c89e4eSSatish Balay @*/
6117087cfbeSBarry Smith PetscErrorCode  PetscMallocDumpLog(FILE *fp)
612e5c89e4eSSatish Balay {
613e5c89e4eSSatish Balay   PetscInt       i,j,n,dummy,*perm;
614e5c89e4eSSatish Balay   size_t         *shortlength;
615f56c2debSBarry Smith   int            *shortcount,err;
616e5c89e4eSSatish Balay   PetscMPIInt    rank,size,tag = 1212 /* very bad programming */;
617ace3abfcSBarry Smith   PetscBool      match;
618e5c89e4eSSatish Balay   const char     **shortfunction;
619e5c89e4eSSatish Balay   PetscLogDouble rss;
620e5c89e4eSSatish Balay   MPI_Status     status;
621e5c89e4eSSatish Balay   PetscErrorCode ierr;
622e5c89e4eSSatish Balay 
623e5c89e4eSSatish Balay   PetscFunctionBegin;
624e5c89e4eSSatish Balay   ierr = MPI_Comm_rank(MPI_COMM_WORLD,&rank);CHKERRQ(ierr);
625e5c89e4eSSatish Balay   ierr = MPI_Comm_size(MPI_COMM_WORLD,&size);CHKERRQ(ierr);
626e5c89e4eSSatish Balay   /*
627e5c89e4eSSatish Balay        Try to get the data printed in order by processor. This will only sometimes work
628e5c89e4eSSatish Balay   */
629f56c2debSBarry Smith   err = fflush(fp);
630e32f2f54SBarry Smith   if (err) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SYS,"fflush() failed on file");
631f56c2debSBarry Smith 
632e5c89e4eSSatish Balay   ierr = MPI_Barrier(MPI_COMM_WORLD);CHKERRQ(ierr);
633e5c89e4eSSatish Balay   if (rank) {
634e5c89e4eSSatish Balay     ierr = MPI_Recv(&dummy,1,MPIU_INT,rank-1,tag,MPI_COMM_WORLD,&status);CHKERRQ(ierr);
635e5c89e4eSSatish Balay   }
636e5c89e4eSSatish Balay 
637768aa557SSatish Balay   if (PetscLogMalloc < 0) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONGSTATE,"PetscMallocDumpLog() called without call to PetscMallocSetDumpLog() this is often due to\n                      setting the option -malloc_log AFTER PetscInitialize() with PetscOptionsInsert() or PetscOptionsInsertFile()");
638768aa557SSatish Balay 
639da9f1d6bSBarry Smith   if (!fp) fp = PETSC_STDOUT;
640f3d65365SJed Brown   ierr = PetscMemoryGetMaximumUsage(&rss);CHKERRQ(ierr);
641e5c89e4eSSatish Balay   if (rss) {
642f3d65365SJed Brown     ierr = PetscFPrintf(MPI_COMM_WORLD,fp,"[%d] Maximum memory PetscMalloc()ed %.0f maximum size of entire process %.0f\n",rank,(PetscLogDouble)TRMaxMem,rss);CHKERRQ(ierr);
643e5c89e4eSSatish Balay   } else {
644e5c89e4eSSatish Balay     ierr = PetscFPrintf(MPI_COMM_WORLD,fp,"[%d] Maximum memory PetscMalloc()ed %.0f OS cannot compute size of entire process\n",rank,(PetscLogDouble)TRMaxMem);CHKERRQ(ierr);
645e5c89e4eSSatish Balay   }
646e32f2f54SBarry Smith   shortcount    = (int*)malloc(PetscLogMalloc*sizeof(int));if (!shortcount) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_MEM,"Out of memory");
647e32f2f54SBarry Smith   shortlength   = (size_t*)malloc(PetscLogMalloc*sizeof(size_t));if (!shortlength) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_MEM,"Out of memory");
648e32f2f54SBarry Smith   shortfunction = (const char**)malloc(PetscLogMalloc*sizeof(char*));if (!shortfunction) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_MEM,"Out of memory");
64997b9d747SJed Brown   for (i=0,n=0; i<PetscLogMalloc; i++) {
650e5c89e4eSSatish Balay     for (j=0; j<n; j++) {
651e5c89e4eSSatish Balay       ierr = PetscStrcmp(shortfunction[j],PetscLogMallocFunction[i],&match);CHKERRQ(ierr);
652e5c89e4eSSatish Balay       if (match) {
653e5c89e4eSSatish Balay         shortlength[j] += PetscLogMallocLength[i];
65459ffdab8SBarry Smith         shortcount[j]++;
655e5c89e4eSSatish Balay         goto foundit;
656e5c89e4eSSatish Balay       }
657e5c89e4eSSatish Balay     }
658e5c89e4eSSatish Balay     shortfunction[n] = PetscLogMallocFunction[i];
659e5c89e4eSSatish Balay     shortlength[n]   = PetscLogMallocLength[i];
66059ffdab8SBarry Smith     shortcount[n]    = 1;
661e5c89e4eSSatish Balay     n++;
662e5c89e4eSSatish Balay foundit:;
663e5c89e4eSSatish Balay   }
664e5c89e4eSSatish Balay 
665e32f2f54SBarry Smith   perm = (PetscInt*)malloc(n*sizeof(PetscInt));if (!perm) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_MEM,"Out of memory");
666e5c89e4eSSatish Balay   for (i=0; i<n; i++) perm[i] = i;
667e5c89e4eSSatish Balay   ierr = PetscSortStrWithPermutation(n,(const char**)shortfunction,perm);CHKERRQ(ierr);
668e5c89e4eSSatish Balay 
669e5c89e4eSSatish Balay   ierr = PetscFPrintf(MPI_COMM_WORLD,fp,"[%d] Memory usage sorted by function\n",rank);CHKERRQ(ierr);
670e5c89e4eSSatish Balay   for (i=0; i<n; i++) {
67159ffdab8SBarry Smith     ierr = PetscFPrintf(MPI_COMM_WORLD,fp,"[%d] %d %.0f %s()\n",rank,shortcount[perm[i]],(PetscLogDouble)shortlength[perm[i]],shortfunction[perm[i]]);CHKERRQ(ierr);
672e5c89e4eSSatish Balay   }
673e5c89e4eSSatish Balay   free(perm);
674e5c89e4eSSatish Balay   free(shortlength);
67559ffdab8SBarry Smith   free(shortcount);
676e5c89e4eSSatish Balay   free((char**)shortfunction);
677f56c2debSBarry Smith   err = fflush(fp);
678e32f2f54SBarry Smith   if (err) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SYS,"fflush() failed on file");
679e5c89e4eSSatish Balay   if (rank != size-1) {
680e5c89e4eSSatish Balay     ierr = MPI_Send(&dummy,1,MPIU_INT,rank+1,tag,MPI_COMM_WORLD);CHKERRQ(ierr);
681e5c89e4eSSatish Balay   }
682e5c89e4eSSatish Balay   PetscFunctionReturn(0);
683e5c89e4eSSatish Balay }
684e5c89e4eSSatish Balay 
685e5c89e4eSSatish Balay /* ---------------------------------------------------------------------------- */
686e5c89e4eSSatish Balay 
687e5c89e4eSSatish Balay #undef __FUNCT__
688e5c89e4eSSatish Balay #define __FUNCT__ "PetscMallocDebug"
689e5c89e4eSSatish Balay /*@C
690e5c89e4eSSatish Balay     PetscMallocDebug - Turns on/off debugging for the memory management routines.
691e5c89e4eSSatish Balay 
692e5c89e4eSSatish Balay     Not Collective
693e5c89e4eSSatish Balay 
694e5c89e4eSSatish Balay     Input Parameter:
695e5c89e4eSSatish Balay .   level - PETSC_TRUE or PETSC_FALSE
696e5c89e4eSSatish Balay 
697e5c89e4eSSatish Balay    Level: intermediate
698e5c89e4eSSatish Balay 
699e5c89e4eSSatish Balay .seealso: CHKMEMQ(), PetscMallocValidate()
700e5c89e4eSSatish Balay @*/
7017087cfbeSBarry Smith PetscErrorCode  PetscMallocDebug(PetscBool level)
702e5c89e4eSSatish Balay {
703e5c89e4eSSatish Balay   PetscFunctionBegin;
704e5c89e4eSSatish Balay   TRdebugLevel = level;
705e5c89e4eSSatish Balay   PetscFunctionReturn(0);
706e5c89e4eSSatish Balay }
7070acecf5bSBarry Smith 
7080acecf5bSBarry Smith #undef __FUNCT__
7090acecf5bSBarry Smith #define __FUNCT__ "PetscMallocGetDebug"
7100acecf5bSBarry Smith /*@C
7110acecf5bSBarry Smith     PetscMallocGetDebug - Indicates if any PETSc is doing ANY memory debugging.
7120acecf5bSBarry Smith 
7130acecf5bSBarry Smith     Not Collective
7140acecf5bSBarry Smith 
7150acecf5bSBarry Smith     Output Parameter:
7160acecf5bSBarry Smith .    flg - PETSC_TRUE if any debugger
7170acecf5bSBarry Smith 
7180acecf5bSBarry Smith    Level: intermediate
7190acecf5bSBarry Smith 
7200acecf5bSBarry Smith     Note that by default, the debug version always does some debugging unless you run with -malloc no
7210acecf5bSBarry Smith 
7220acecf5bSBarry Smith 
7230acecf5bSBarry Smith .seealso: CHKMEMQ(), PetscMallocValidate()
7240acecf5bSBarry Smith @*/
7250acecf5bSBarry Smith PetscErrorCode  PetscMallocGetDebug(PetscBool *flg)
7260acecf5bSBarry Smith {
7270acecf5bSBarry Smith   PetscFunctionBegin;
7280acecf5bSBarry Smith   if (PetscTrMalloc == PetscTrMallocDefault) *flg = PETSC_TRUE;
7290acecf5bSBarry Smith   else *flg = PETSC_FALSE;
7300acecf5bSBarry Smith   PetscFunctionReturn(0);
7310acecf5bSBarry Smith }
732