17d0a6c19SBarry Smith 2e5c89e4eSSatish Balay /* 3e5c89e4eSSatish Balay Interface to malloc() and free(). This code allows for 4e5c89e4eSSatish Balay logging of memory usage and some error checking 5e5c89e4eSSatish Balay */ 6c6db04a5SJed Brown #include <petscsys.h> /*I "petscsys.h" I*/ 7665c2dedSJed Brown #include <petscviewer.h> 8e5c89e4eSSatish Balay #if defined(PETSC_HAVE_MALLOC_H) 9e5c89e4eSSatish Balay #include <malloc.h> 10e5c89e4eSSatish Balay #endif 11e5c89e4eSSatish Balay 12e5c89e4eSSatish Balay 13e5c89e4eSSatish Balay /* 14e5c89e4eSSatish Balay These are defined in mal.c and ensure that malloced space is PetscScalar aligned 15e5c89e4eSSatish Balay */ 16efca3c55SSatish Balay extern PetscErrorCode PetscMallocAlign(size_t,int,const char[],const char[],void**); 17efca3c55SSatish Balay extern PetscErrorCode PetscFreeAlign(void*,int,const char[],const char[]); 18efca3c55SSatish Balay extern PetscErrorCode PetscTrMallocDefault(size_t,int,const char[],const char[],void**); 19efca3c55SSatish Balay extern PetscErrorCode PetscTrFreeDefault(void*,int,const char[],const char[]); 20e5c89e4eSSatish Balay 21e5c89e4eSSatish Balay 220700a824SBarry Smith #define CLASSID_VALUE ((PetscClassId) 0xf0e0d0c9) 230700a824SBarry Smith #define ALREADY_FREED ((PetscClassId) 0x0f0e0d9c) 24e5c89e4eSSatish Balay 25e5c89e4eSSatish Balay typedef struct _trSPACE { 26e5c89e4eSSatish Balay size_t size; 27e5c89e4eSSatish Balay int id; 28e5c89e4eSSatish Balay int lineno; 29e5c89e4eSSatish Balay const char *filename; 30e5c89e4eSSatish Balay const char *functionname; 310700a824SBarry Smith PetscClassId classid; 328bf1f09cSShri Abhyankar #if defined(PETSC_USE_DEBUG) 33e5c89e4eSSatish Balay PetscStack stack; 34e5c89e4eSSatish Balay #endif 35e5c89e4eSSatish Balay struct _trSPACE *next,*prev; 36e5c89e4eSSatish Balay } TRSPACE; 37e5c89e4eSSatish Balay 3825b53cc9SJed Brown /* HEADER_BYTES is the number of bytes in a PetscMalloc() header. 3925b53cc9SJed Brown It is sizeof(TRSPACE) padded to be a multiple of PETSC_MEMALIGN. 4025b53cc9SJed Brown */ 41e5c89e4eSSatish Balay 42a64a8e02SBarry Smith #define HEADER_BYTES ((sizeof(TRSPACE)+(PETSC_MEMALIGN-1)) & ~(PETSC_MEMALIGN-1)) 43e5c89e4eSSatish Balay 44e5c89e4eSSatish Balay 4525b53cc9SJed Brown /* This union is used to insure that the block passed to the user retains 4625b53cc9SJed Brown a minimum alignment of PETSC_MEMALIGN. 4725b53cc9SJed Brown */ 48e5c89e4eSSatish Balay typedef union { 49e5c89e4eSSatish Balay TRSPACE sp; 5025b53cc9SJed Brown char v[HEADER_BYTES]; 51e5c89e4eSSatish Balay } TrSPACE; 52e5c89e4eSSatish Balay 53b022a5c1SBarry Smith 54e5c89e4eSSatish Balay static size_t TRallocated = 0; 55e5c89e4eSSatish Balay static int TRfrags = 0; 56e5c89e4eSSatish Balay static TRSPACE *TRhead = 0; 57e5c89e4eSSatish Balay static int TRid = 0; 58ace3abfcSBarry Smith static PetscBool TRdebugLevel = PETSC_FALSE; 59e5c89e4eSSatish Balay static size_t TRMaxMem = 0; 60e5c89e4eSSatish Balay /* 61e5c89e4eSSatish Balay Arrays to log information on all Mallocs 62e5c89e4eSSatish Balay */ 63e5c89e4eSSatish Balay static int PetscLogMallocMax = 10000,PetscLogMalloc = -1; 64574034a9SJed Brown static size_t PetscLogMallocThreshold = 0; 65e5c89e4eSSatish Balay static size_t *PetscLogMallocLength; 66efca3c55SSatish Balay static const char **PetscLogMallocFile,**PetscLogMallocFunction; 67e5c89e4eSSatish Balay 68e5c89e4eSSatish Balay #undef __FUNCT__ 69b022a5c1SBarry Smith #define __FUNCT__ "PetscSetUseTrMalloc_Private" 70b022a5c1SBarry Smith PetscErrorCode PetscSetUseTrMalloc_Private(void) 71b022a5c1SBarry Smith { 72b022a5c1SBarry Smith PetscErrorCode ierr; 73b022a5c1SBarry Smith 74b022a5c1SBarry Smith PetscFunctionBegin; 75b022a5c1SBarry Smith ierr = PetscMallocSet(PetscTrMallocDefault,PetscTrFreeDefault);CHKERRQ(ierr); 76a297a907SKarl Rupp 77b022a5c1SBarry Smith TRallocated = 0; 78b022a5c1SBarry Smith TRfrags = 0; 79b022a5c1SBarry Smith TRhead = 0; 80b022a5c1SBarry Smith TRid = 0; 81b022a5c1SBarry Smith TRdebugLevel = PETSC_FALSE; 82b022a5c1SBarry Smith TRMaxMem = 0; 83b022a5c1SBarry Smith PetscLogMallocMax = 10000; 84b022a5c1SBarry Smith PetscLogMalloc = -1; 85b022a5c1SBarry Smith PetscFunctionReturn(0); 86b022a5c1SBarry Smith } 87b022a5c1SBarry Smith 88b022a5c1SBarry Smith #undef __FUNCT__ 89e5c89e4eSSatish Balay #define __FUNCT__ "PetscMallocValidate" 90e5c89e4eSSatish Balay /*@C 91e5c89e4eSSatish Balay PetscMallocValidate - Test the memory for corruption. This can be used to 92e5c89e4eSSatish Balay check for memory overwrites. 93e5c89e4eSSatish Balay 94e5c89e4eSSatish Balay Input Parameter: 95e5c89e4eSSatish Balay + line - line number where call originated. 96e5c89e4eSSatish Balay . function - name of function calling 97efca3c55SSatish Balay - file - file where function is 98e5c89e4eSSatish Balay 99e5c89e4eSSatish Balay Return value: 100e5c89e4eSSatish Balay The number of errors detected. 101e5c89e4eSSatish Balay 102e5c89e4eSSatish Balay Output Effect: 103e5c89e4eSSatish Balay Error messages are written to stdout. 104e5c89e4eSSatish Balay 105e5c89e4eSSatish Balay Level: advanced 106e5c89e4eSSatish Balay 107e5c89e4eSSatish Balay Notes: 108e5c89e4eSSatish Balay You should generally use CHKMEMQ as a short cut for calling this 109e5c89e4eSSatish Balay routine. 110e5c89e4eSSatish Balay 111efca3c55SSatish Balay The line, function, file are given by the C preprocessor as 112efca3c55SSatish Balay __LINE__, __FUNCT__, __FILE__ 113e5c89e4eSSatish Balay 114e5c89e4eSSatish Balay The Fortran calling sequence is simply PetscMallocValidate(ierr) 115e5c89e4eSSatish Balay 116e5c89e4eSSatish Balay No output is generated if there are no problems detected. 117e5c89e4eSSatish Balay 118e5c89e4eSSatish Balay .seealso: CHKMEMQ 119e5c89e4eSSatish Balay 120e5c89e4eSSatish Balay @*/ 121efca3c55SSatish Balay PetscErrorCode PetscMallocValidate(int line,const char function[],const char file[]) 122e5c89e4eSSatish Balay { 1236c093d5bSvictor TRSPACE *head,*lasthead; 124e5c89e4eSSatish Balay char *a; 1250700a824SBarry Smith PetscClassId *nend; 126e5c89e4eSSatish Balay 127e5c89e4eSSatish Balay PetscFunctionBegin; 1286c093d5bSvictor head = TRhead; lasthead = NULL; 129e5c89e4eSSatish Balay while (head) { 1300700a824SBarry Smith if (head->classid != CLASSID_VALUE) { 131efca3c55SSatish Balay (*PetscErrorPrintf)("PetscMallocValidate: error detected at %s() line %d in %s\n",function,line,file); 132e5c89e4eSSatish Balay (*PetscErrorPrintf)("Memory at address %p is corrupted\n",head); 133e5c89e4eSSatish Balay (*PetscErrorPrintf)("Probably write past beginning or end of array\n"); 134efca3c55SSatish Balay if (lasthead) (*PetscErrorPrintf)("Last intact block allocated in %s() line %d in %s\n",lasthead->functionname,lasthead->lineno,lasthead->filename); 135e32f2f54SBarry Smith SETERRQ(PETSC_COMM_SELF,PETSC_ERR_MEMC," "); 136e5c89e4eSSatish Balay } 137e5c89e4eSSatish Balay a = (char*)(((TrSPACE*)head) + 1); 1380700a824SBarry Smith nend = (PetscClassId*)(a + head->size); 1390700a824SBarry Smith if (*nend != CLASSID_VALUE) { 140efca3c55SSatish Balay (*PetscErrorPrintf)("PetscMallocValidate: error detected at %s() line %d in %s\n",function,line,file); 141e5c89e4eSSatish Balay if (*nend == ALREADY_FREED) { 142e5c89e4eSSatish Balay (*PetscErrorPrintf)("Memory [id=%d(%.0f)] at address %p already freed\n",head->id,(PetscLogDouble)head->size,a); 143e32f2f54SBarry Smith SETERRQ(PETSC_COMM_SELF,PETSC_ERR_MEMC," "); 144e5c89e4eSSatish Balay } else { 145e5c89e4eSSatish Balay (*PetscErrorPrintf)("Memory [id=%d(%.0f)] at address %p is corrupted (probably write past end of array)\n",head->id,(PetscLogDouble)head->size,a); 146efca3c55SSatish Balay (*PetscErrorPrintf)("Memory originally allocated in %s() line %d in %s\n",head->functionname,head->lineno,head->filename); 147e32f2f54SBarry Smith SETERRQ(PETSC_COMM_SELF,PETSC_ERR_MEMC," "); 148e5c89e4eSSatish Balay } 149e5c89e4eSSatish Balay } 1506c093d5bSvictor lasthead = head; 151e5c89e4eSSatish Balay head = head->next; 152e5c89e4eSSatish Balay } 153e5c89e4eSSatish Balay PetscFunctionReturn(0); 154e5c89e4eSSatish Balay } 155e5c89e4eSSatish Balay 156e5c89e4eSSatish Balay #undef __FUNCT__ 157e5c89e4eSSatish Balay #define __FUNCT__ "PetscTrMallocDefault" 158e5c89e4eSSatish Balay /* 159e5c89e4eSSatish Balay PetscTrMallocDefault - Malloc with tracing. 160e5c89e4eSSatish Balay 161e5c89e4eSSatish Balay Input Parameters: 162e5c89e4eSSatish Balay + a - number of bytes to allocate 163e5c89e4eSSatish Balay . lineno - line number where used. Use __LINE__ for this 164e5c89e4eSSatish Balay . function - function calling routine. Use __FUNCT__ for this 165efca3c55SSatish Balay - filename - file name where used. Use __FILE__ for this 166e5c89e4eSSatish Balay 167e5c89e4eSSatish Balay Returns: 168e5c89e4eSSatish Balay double aligned pointer to requested storage, or null if not 169e5c89e4eSSatish Balay available. 170e5c89e4eSSatish Balay */ 171efca3c55SSatish Balay PetscErrorCode PetscTrMallocDefault(size_t a,int lineno,const char function[],const char filename[],void **result) 172e5c89e4eSSatish Balay { 173e5c89e4eSSatish Balay TRSPACE *head; 174e5c89e4eSSatish Balay char *inew; 175e5c89e4eSSatish Balay size_t nsize; 176e5c89e4eSSatish Balay PetscErrorCode ierr; 177e5c89e4eSSatish Balay 178e5c89e4eSSatish Balay PetscFunctionBegin; 179e5c89e4eSSatish Balay if (TRdebugLevel) { 180efca3c55SSatish Balay ierr = PetscMallocValidate(lineno,function,filename); if (ierr) PetscFunctionReturn(ierr); 181e5c89e4eSSatish Balay } 182e5c89e4eSSatish Balay 18325b53cc9SJed Brown nsize = (a + (PETSC_MEMALIGN-1)) & ~(PETSC_MEMALIGN-1); 184efca3c55SSatish Balay ierr = PetscMallocAlign(nsize+sizeof(TrSPACE)+sizeof(PetscClassId),lineno,function,filename,(void**)&inew);CHKERRQ(ierr); 185e5c89e4eSSatish Balay 186e5c89e4eSSatish Balay head = (TRSPACE*)inew; 187e5c89e4eSSatish Balay inew += sizeof(TrSPACE); 188e5c89e4eSSatish Balay 189e5c89e4eSSatish Balay if (TRhead) TRhead->prev = head; 190e5c89e4eSSatish Balay head->next = TRhead; 191e5c89e4eSSatish Balay TRhead = head; 192e5c89e4eSSatish Balay head->prev = 0; 193e5c89e4eSSatish Balay head->size = nsize; 194e5c89e4eSSatish Balay head->id = TRid; 195e5c89e4eSSatish Balay head->lineno = lineno; 196e5c89e4eSSatish Balay 197e5c89e4eSSatish Balay head->filename = filename; 198e5c89e4eSSatish Balay head->functionname = function; 1990700a824SBarry Smith head->classid = CLASSID_VALUE; 2000700a824SBarry Smith *(PetscClassId*)(inew + nsize) = CLASSID_VALUE; 201e5c89e4eSSatish Balay 202e5c89e4eSSatish Balay TRallocated += nsize; 203a297a907SKarl Rupp if (TRallocated > TRMaxMem) TRMaxMem = TRallocated; 204e5c89e4eSSatish Balay TRfrags++; 205e5c89e4eSSatish Balay 2068bf1f09cSShri Abhyankar #if defined(PETSC_USE_DEBUG) 20776386721SLisandro Dalcin if (PetscStackActive()) { 208*5c25fcd7SBarry Smith ierr = PetscStackCopy(petscstack,&head->stack);CHKERRQ(ierr); 2092c9581d2SBarry Smith /* fix the line number to where the malloc() was called, not the PetscFunctionBegin; */ 2102c9581d2SBarry Smith head->stack.line[head->stack.currentsize-2] = lineno; 21176386721SLisandro Dalcin } 212e5c89e4eSSatish Balay #endif 213e5c89e4eSSatish Balay 214e5c89e4eSSatish Balay /* 215e5c89e4eSSatish Balay Allow logging of all mallocs made 216e5c89e4eSSatish Balay */ 217574034a9SJed Brown if (PetscLogMalloc > -1 && PetscLogMalloc < PetscLogMallocMax && a >= PetscLogMallocThreshold) { 218e5c89e4eSSatish Balay if (!PetscLogMalloc) { 219e5c89e4eSSatish Balay PetscLogMallocLength = (size_t*)malloc(PetscLogMallocMax*sizeof(size_t)); 220e32f2f54SBarry Smith if (!PetscLogMallocLength) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_MEM," "); 221a297a907SKarl Rupp 222a2ea699eSBarry Smith PetscLogMallocFile = (const char**)malloc(PetscLogMallocMax*sizeof(char*)); 223e32f2f54SBarry Smith if (!PetscLogMallocFile) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_MEM," "); 224a297a907SKarl Rupp 225a2ea699eSBarry Smith PetscLogMallocFunction = (const char**)malloc(PetscLogMallocMax*sizeof(char*)); 226e32f2f54SBarry Smith if (!PetscLogMallocFunction) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_MEM," "); 227e5c89e4eSSatish Balay } 228e5c89e4eSSatish Balay PetscLogMallocLength[PetscLogMalloc] = nsize; 229e5c89e4eSSatish Balay PetscLogMallocFile[PetscLogMalloc] = filename; 230e5c89e4eSSatish Balay PetscLogMallocFunction[PetscLogMalloc++] = function; 231e5c89e4eSSatish Balay } 232e5c89e4eSSatish Balay *result = (void*)inew; 233e5c89e4eSSatish Balay PetscFunctionReturn(0); 234e5c89e4eSSatish Balay } 235e5c89e4eSSatish Balay 236e5c89e4eSSatish Balay 237e5c89e4eSSatish Balay #undef __FUNCT__ 238e5c89e4eSSatish Balay #define __FUNCT__ "PetscTrFreeDefault" 239e5c89e4eSSatish Balay /* 240e5c89e4eSSatish Balay PetscTrFreeDefault - Free with tracing. 241e5c89e4eSSatish Balay 242e5c89e4eSSatish Balay Input Parameters: 243e5c89e4eSSatish Balay . a - pointer to a block allocated with PetscTrMalloc 244e5c89e4eSSatish Balay . lineno - line number where used. Use __LINE__ for this 245e5c89e4eSSatish Balay . function - function calling routine. Use __FUNCT__ for this 246e5c89e4eSSatish Balay . file - file name where used. Use __FILE__ for this 247e5c89e4eSSatish Balay */ 248efca3c55SSatish Balay PetscErrorCode PetscTrFreeDefault(void *aa,int line,const char function[],const char file[]) 249e5c89e4eSSatish Balay { 250e5c89e4eSSatish Balay char *a = (char*)aa; 251e5c89e4eSSatish Balay TRSPACE *head; 252e5c89e4eSSatish Balay char *ahead; 253e5c89e4eSSatish Balay PetscErrorCode ierr; 2540700a824SBarry Smith PetscClassId *nend; 255e5c89e4eSSatish Balay 256e5c89e4eSSatish Balay PetscFunctionBegin; 257e5c89e4eSSatish Balay /* Do not try to handle empty blocks */ 25849d7da52SJed Brown if (!a) PetscFunctionReturn(0); 259e5c89e4eSSatish Balay 260e5c89e4eSSatish Balay if (TRdebugLevel) { 261efca3c55SSatish Balay ierr = PetscMallocValidate(line,function,file);CHKERRQ(ierr); 262e5c89e4eSSatish Balay } 263e5c89e4eSSatish Balay 264e5c89e4eSSatish Balay ahead = a; 265e5c89e4eSSatish Balay a = a - sizeof(TrSPACE); 266e5c89e4eSSatish Balay head = (TRSPACE*)a; 267e5c89e4eSSatish Balay 2680700a824SBarry Smith if (head->classid != CLASSID_VALUE) { 269efca3c55SSatish Balay (*PetscErrorPrintf)("PetscTrFreeDefault() called from %s() line %d in %s\n",function,line,file); 270e5c89e4eSSatish Balay (*PetscErrorPrintf)("Block at address %p is corrupted; cannot free;\nmay be block not allocated with PetscMalloc()\n",a); 271e32f2f54SBarry Smith SETERRQ(PETSC_COMM_SELF,PETSC_ERR_MEMC,"Bad location or corrupted memory"); 272e5c89e4eSSatish Balay } 2730700a824SBarry Smith nend = (PetscClassId*)(ahead + head->size); 2740700a824SBarry Smith if (*nend != CLASSID_VALUE) { 275e5c89e4eSSatish Balay if (*nend == ALREADY_FREED) { 276efca3c55SSatish Balay (*PetscErrorPrintf)("PetscTrFreeDefault() called from %s() line %d in %s\n",function,line,file); 277e5c89e4eSSatish Balay (*PetscErrorPrintf)("Block [id=%d(%.0f)] at address %p was already freed\n",head->id,(PetscLogDouble)head->size,a + sizeof(TrSPACE)); 278e5c89e4eSSatish Balay if (head->lineno > 0 && head->lineno < 50000 /* sanity check */) { 279efca3c55SSatish Balay (*PetscErrorPrintf)("Block freed in %s() line %d in %s\n",head->functionname,head->lineno,head->filename); 280e5c89e4eSSatish Balay } else { 281efca3c55SSatish Balay (*PetscErrorPrintf)("Block allocated in %s() line %d in %s\n",head->functionname,-head->lineno,head->filename); 282e5c89e4eSSatish Balay } 283e32f2f54SBarry Smith SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"Memory already freed"); 284e5c89e4eSSatish Balay } else { 285e5c89e4eSSatish Balay /* Damaged tail */ 286efca3c55SSatish Balay (*PetscErrorPrintf)("PetscTrFreeDefault() called from %s() line %d in %s\n",function,line,file); 287e5c89e4eSSatish Balay (*PetscErrorPrintf)("Block [id=%d(%.0f)] at address %p is corrupted (probably write past end of array)\n",head->id,(PetscLogDouble)head->size,a); 288efca3c55SSatish Balay (*PetscErrorPrintf)("Block allocated in %s() line %d in %s\n",head->functionname,head->lineno,head->filename); 289e32f2f54SBarry Smith SETERRQ(PETSC_COMM_SELF,PETSC_ERR_MEMC,"Corrupted memory"); 290e5c89e4eSSatish Balay } 291e5c89e4eSSatish Balay } 292e5c89e4eSSatish Balay /* Mark the location freed */ 293e5c89e4eSSatish Balay *nend = ALREADY_FREED; 294e5c89e4eSSatish Balay /* Save location where freed. If we suspect the line number, mark as allocated location */ 295e5c89e4eSSatish Balay if (line > 0 && line < 50000) { 296e5c89e4eSSatish Balay head->lineno = line; 297e5c89e4eSSatish Balay head->filename = file; 298e5c89e4eSSatish Balay head->functionname = function; 299e5c89e4eSSatish Balay } else { 300e5c89e4eSSatish Balay head->lineno = -head->lineno; 301e5c89e4eSSatish Balay } 302e5c89e4eSSatish Balay /* zero out memory - helps to find some reuse of already freed memory */ 303e5c89e4eSSatish Balay ierr = PetscMemzero(aa,head->size);CHKERRQ(ierr); 304e5c89e4eSSatish Balay 305e5c89e4eSSatish Balay TRallocated -= head->size; 306e5c89e4eSSatish Balay TRfrags--; 307e5c89e4eSSatish Balay if (head->prev) head->prev->next = head->next; 308e5c89e4eSSatish Balay else TRhead = head->next; 309e5c89e4eSSatish Balay 310e5c89e4eSSatish Balay if (head->next) head->next->prev = head->prev; 311efca3c55SSatish Balay ierr = PetscFreeAlign(a,line,function,file);CHKERRQ(ierr); 312e5c89e4eSSatish Balay PetscFunctionReturn(0); 313e5c89e4eSSatish Balay } 314e5c89e4eSSatish Balay 315e5c89e4eSSatish Balay 316e5c89e4eSSatish Balay #undef __FUNCT__ 317e5c89e4eSSatish Balay #define __FUNCT__ "PetscMemoryShowUsage" 318fe7fb379SMatthew Knepley /*@C 319e5c89e4eSSatish Balay PetscMemoryShowUsage - Shows the amount of memory currently being used 320e5c89e4eSSatish Balay in a communicator. 321e5c89e4eSSatish Balay 322e5c89e4eSSatish Balay Collective on PetscViewer 323e5c89e4eSSatish Balay 324e5c89e4eSSatish Balay Input Parameter: 325e5c89e4eSSatish Balay + viewer - the viewer that defines the communicator 326e5c89e4eSSatish Balay - message - string printed before values 327e5c89e4eSSatish Balay 328e5c89e4eSSatish Balay Level: intermediate 329e5c89e4eSSatish Balay 330e5c89e4eSSatish Balay Concepts: memory usage 331e5c89e4eSSatish Balay 3321bb97394SVictor Eijkhout .seealso: PetscMallocDump(), PetscMemoryGetCurrentUsage() 333e5c89e4eSSatish Balay @*/ 3347087cfbeSBarry Smith PetscErrorCode PetscMemoryShowUsage(PetscViewer viewer,const char message[]) 335e5c89e4eSSatish Balay { 336e5c89e4eSSatish Balay PetscLogDouble allocated,maximum,resident,residentmax; 337e5c89e4eSSatish Balay PetscErrorCode ierr; 338e5c89e4eSSatish Balay PetscMPIInt rank; 339e5c89e4eSSatish Balay MPI_Comm comm; 340e5c89e4eSSatish Balay 341e5c89e4eSSatish Balay PetscFunctionBegin; 342e5c89e4eSSatish Balay if (!viewer) viewer = PETSC_VIEWER_STDOUT_WORLD; 343e5c89e4eSSatish Balay ierr = PetscMallocGetCurrentUsage(&allocated);CHKERRQ(ierr); 344e5c89e4eSSatish Balay ierr = PetscMallocGetMaximumUsage(&maximum);CHKERRQ(ierr); 345e5c89e4eSSatish Balay ierr = PetscMemoryGetCurrentUsage(&resident);CHKERRQ(ierr); 346e5c89e4eSSatish Balay ierr = PetscMemoryGetMaximumUsage(&residentmax);CHKERRQ(ierr); 347e5c89e4eSSatish Balay if (residentmax > 0) residentmax = PetscMax(resident,residentmax); 348e5c89e4eSSatish Balay ierr = PetscObjectGetComm((PetscObject)viewer,&comm);CHKERRQ(ierr); 349e5c89e4eSSatish Balay ierr = MPI_Comm_rank(comm,&rank);CHKERRQ(ierr); 350e5c89e4eSSatish Balay ierr = PetscViewerASCIIPrintf(viewer,message);CHKERRQ(ierr); 3517b23a99aSBarry Smith ierr = PetscViewerASCIISynchronizedAllow(viewer,PETSC_TRUE);CHKERRQ(ierr); 352e5c89e4eSSatish Balay if (resident && residentmax && allocated) { 353e5c89e4eSSatish Balay ierr = PetscViewerASCIISynchronizedPrintf(viewer,"[%d]Current space PetscMalloc()ed %g, max space PetscMalloced() %g\n[%d]Current process memory %g max process memory %g\n",rank,allocated,maximum,rank,resident,residentmax);CHKERRQ(ierr); 354e5c89e4eSSatish Balay } else if (resident && residentmax) { 355e5c89e4eSSatish Balay ierr = PetscViewerASCIISynchronizedPrintf(viewer,"[%d]Run with -malloc to get statistics on PetscMalloc() calls\n[%d]Current process memory %g max process memory %g\n",rank,rank,resident,residentmax);CHKERRQ(ierr); 356e5c89e4eSSatish Balay } else if (resident && allocated) { 357e5c89e4eSSatish Balay ierr = PetscViewerASCIISynchronizedPrintf(viewer,"[%d]Current space PetscMalloc()ed %g, max space PetscMalloced() %g\n[%d]Current process memory %g, run with -memory_info to get max memory usage\n",rank,allocated,maximum,rank,resident);CHKERRQ(ierr); 358e5c89e4eSSatish Balay } else if (allocated) { 359e5c89e4eSSatish Balay ierr = PetscViewerASCIISynchronizedPrintf(viewer,"[%d]Current space PetscMalloc()ed %g, max space PetscMalloced() %g\n[%d]OS cannot compute process memory\n",rank,allocated,maximum,rank);CHKERRQ(ierr); 360e5c89e4eSSatish Balay } else { 361e5c89e4eSSatish Balay ierr = PetscViewerASCIIPrintf(viewer,"Run with -malloc to get statistics on PetscMalloc() calls\nOS cannot compute process memory\n");CHKERRQ(ierr); 362e5c89e4eSSatish Balay } 363e5c89e4eSSatish Balay ierr = PetscViewerFlush(viewer);CHKERRQ(ierr); 3647b23a99aSBarry Smith ierr = PetscViewerASCIISynchronizedAllow(viewer,PETSC_FALSE);CHKERRQ(ierr); 365e5c89e4eSSatish Balay PetscFunctionReturn(0); 366e5c89e4eSSatish Balay } 367e5c89e4eSSatish Balay 368e5c89e4eSSatish Balay #undef __FUNCT__ 369e5c89e4eSSatish Balay #define __FUNCT__ "PetscMallocGetCurrentUsage" 370e5c89e4eSSatish Balay /*@C 371e5c89e4eSSatish Balay PetscMallocGetCurrentUsage - gets the current amount of memory used that was PetscMalloc()ed 372e5c89e4eSSatish Balay 373e5c89e4eSSatish Balay Not Collective 374e5c89e4eSSatish Balay 375e5c89e4eSSatish Balay Output Parameters: 376e5c89e4eSSatish Balay . space - number of bytes currently allocated 377e5c89e4eSSatish Balay 378e5c89e4eSSatish Balay Level: intermediate 379e5c89e4eSSatish Balay 380e5c89e4eSSatish Balay Concepts: memory usage 381e5c89e4eSSatish Balay 382e5c89e4eSSatish Balay .seealso: PetscMallocDump(), PetscMallocDumpLog(), PetscMallocGetMaximumUsage(), PetscMemoryGetCurrentUsage(), 383e5c89e4eSSatish Balay PetscMemoryGetMaximumUsage() 384e5c89e4eSSatish Balay @*/ 3857087cfbeSBarry Smith PetscErrorCode PetscMallocGetCurrentUsage(PetscLogDouble *space) 386e5c89e4eSSatish Balay { 387e5c89e4eSSatish Balay PetscFunctionBegin; 388e5c89e4eSSatish Balay *space = (PetscLogDouble) TRallocated; 389e5c89e4eSSatish Balay PetscFunctionReturn(0); 390e5c89e4eSSatish Balay } 391e5c89e4eSSatish Balay 392e5c89e4eSSatish Balay #undef __FUNCT__ 393e5c89e4eSSatish Balay #define __FUNCT__ "PetscMallocGetMaximumUsage" 394e5c89e4eSSatish Balay /*@C 395e5c89e4eSSatish Balay PetscMallocGetMaximumUsage - gets the maximum amount of memory used that was PetscMalloc()ed at any time 396e5c89e4eSSatish Balay during this run. 397e5c89e4eSSatish Balay 398e5c89e4eSSatish Balay Not Collective 399e5c89e4eSSatish Balay 400e5c89e4eSSatish Balay Output Parameters: 401e5c89e4eSSatish Balay . space - maximum number of bytes ever allocated at one time 402e5c89e4eSSatish Balay 403e5c89e4eSSatish Balay Level: intermediate 404e5c89e4eSSatish Balay 405e5c89e4eSSatish Balay Concepts: memory usage 406e5c89e4eSSatish Balay 407e5c89e4eSSatish Balay .seealso: PetscMallocDump(), PetscMallocDumpLog(), PetscMallocGetMaximumUsage(), PetscMemoryGetCurrentUsage(), 408e5c89e4eSSatish Balay PetscMemoryGetCurrentUsage() 409e5c89e4eSSatish Balay @*/ 4107087cfbeSBarry Smith PetscErrorCode PetscMallocGetMaximumUsage(PetscLogDouble *space) 411e5c89e4eSSatish Balay { 412e5c89e4eSSatish Balay PetscFunctionBegin; 413e5c89e4eSSatish Balay *space = (PetscLogDouble) TRMaxMem; 414e5c89e4eSSatish Balay PetscFunctionReturn(0); 415e5c89e4eSSatish Balay } 416e5c89e4eSSatish Balay 417a64a8e02SBarry Smith #if defined(PETSC_USE_DEBUG) 418a64a8e02SBarry Smith #undef __FUNCT__ 419a64a8e02SBarry Smith #define __FUNCT__ "PetscMallocGetStack" 420a64a8e02SBarry Smith /*@C 421a64a8e02SBarry Smith PetscMallocGetStack - returns a pointer to the stack for the location in the program a call to PetscMalloc() was used to obtain that memory 422a64a8e02SBarry Smith 423a64a8e02SBarry Smith Collective on PETSC_COMM_WORLD 424a64a8e02SBarry Smith 425a64a8e02SBarry Smith Input Parameter: 426a64a8e02SBarry Smith . ptr - the memory location 427a64a8e02SBarry Smith 428a64a8e02SBarry Smith Output Paramter: 429a64a8e02SBarry Smith . stack - the stack indicating where the program allocated this memory 430a64a8e02SBarry Smith 431a64a8e02SBarry Smith Level: intermediate 432a64a8e02SBarry Smith 433a64a8e02SBarry Smith .seealso: PetscMallocGetCurrentUsage(), PetscMallocDumpLog() 434a64a8e02SBarry Smith @*/ 435a64a8e02SBarry Smith PetscErrorCode PetscMallocGetStack(void *ptr,PetscStack **stack) 436a64a8e02SBarry Smith { 437a64a8e02SBarry Smith TRSPACE *head; 438a64a8e02SBarry Smith 439a64a8e02SBarry Smith PetscFunctionBegin; 440a64a8e02SBarry Smith head = (TRSPACE*) (((char*)ptr) - HEADER_BYTES); 441a64a8e02SBarry Smith *stack = &head->stack; 442a64a8e02SBarry Smith PetscFunctionReturn(0); 443a64a8e02SBarry Smith } 44476386721SLisandro Dalcin #else 44576386721SLisandro Dalcin #undef __FUNCT__ 44676386721SLisandro Dalcin #define __FUNCT__ "PetscMallocGetStack" 44776386721SLisandro Dalcin PetscErrorCode PetscMallocGetStack(void *ptr,void **stack) 44876386721SLisandro Dalcin { 44976386721SLisandro Dalcin PetscFunctionBegin; 45076386721SLisandro Dalcin *stack = 0; 45176386721SLisandro Dalcin PetscFunctionReturn(0); 45276386721SLisandro Dalcin } 453a64a8e02SBarry Smith #endif 454a64a8e02SBarry Smith 455e5c89e4eSSatish Balay #undef __FUNCT__ 456e5c89e4eSSatish Balay #define __FUNCT__ "PetscMallocDump" 457e5c89e4eSSatish Balay /*@C 458e5c89e4eSSatish Balay PetscMallocDump - Dumps the allocated memory blocks to a file. The information 459e5c89e4eSSatish Balay printed is: size of space (in bytes), address of space, id of space, 460e5c89e4eSSatish Balay file in which space was allocated, and line number at which it was 461e5c89e4eSSatish Balay allocated. 462e5c89e4eSSatish Balay 463e5c89e4eSSatish Balay Collective on PETSC_COMM_WORLD 464e5c89e4eSSatish Balay 465e5c89e4eSSatish Balay Input Parameter: 466e5c89e4eSSatish Balay . fp - file pointer. If fp is NULL, stdout is assumed. 467e5c89e4eSSatish Balay 468e5c89e4eSSatish Balay Options Database Key: 469e5c89e4eSSatish Balay . -malloc_dump - Dumps unfreed memory during call to PetscFinalize() 470e5c89e4eSSatish Balay 471e5c89e4eSSatish Balay Level: intermediate 472e5c89e4eSSatish Balay 473e5c89e4eSSatish Balay Fortran Note: 474e5c89e4eSSatish Balay The calling sequence in Fortran is PetscMallocDump(integer ierr) 475e5c89e4eSSatish Balay The fp defaults to stdout. 476e5c89e4eSSatish Balay 477e5c89e4eSSatish Balay Notes: uses MPI_COMM_WORLD, because this may be called in PetscFinalize() after PETSC_COMM_WORLD 478e5c89e4eSSatish Balay has been freed. 479e5c89e4eSSatish Balay 480e5c89e4eSSatish Balay Concepts: memory usage 481e5c89e4eSSatish Balay Concepts: memory bleeding 482e5c89e4eSSatish Balay Concepts: bleeding memory 483e5c89e4eSSatish Balay 4849e9a1f8fSvictor .seealso: PetscMallocGetCurrentUsage(), PetscMallocDumpLog() 485e5c89e4eSSatish Balay @*/ 4867087cfbeSBarry Smith PetscErrorCode PetscMallocDump(FILE *fp) 487e5c89e4eSSatish Balay { 488e5c89e4eSSatish Balay TRSPACE *head; 489e5c89e4eSSatish Balay PetscErrorCode ierr; 490e5c89e4eSSatish Balay PetscMPIInt rank; 491e5c89e4eSSatish Balay 492e5c89e4eSSatish Balay PetscFunctionBegin; 493e5c89e4eSSatish Balay ierr = MPI_Comm_rank(MPI_COMM_WORLD,&rank);CHKERRQ(ierr); 494da9f1d6bSBarry Smith if (!fp) fp = PETSC_STDOUT; 495a297a907SKarl Rupp if (TRallocated > 0) fprintf(fp,"[%d]Total space allocated %.0f bytes\n",rank,(PetscLogDouble)TRallocated); 496e5c89e4eSSatish Balay head = TRhead; 497e5c89e4eSSatish Balay while (head) { 498efca3c55SSatish Balay fprintf(fp,"[%2d]%.0f bytes %s() line %d in %s\n",rank,(PetscLogDouble)head->size,head->functionname,head->lineno,head->filename); 4998bf1f09cSShri Abhyankar #if defined(PETSC_USE_DEBUG) 500e5c89e4eSSatish Balay ierr = PetscStackPrint(&head->stack,fp);CHKERRQ(ierr); 501e5c89e4eSSatish Balay #endif 502e5c89e4eSSatish Balay head = head->next; 503e5c89e4eSSatish Balay } 504e5c89e4eSSatish Balay PetscFunctionReturn(0); 505e5c89e4eSSatish Balay } 506e5c89e4eSSatish Balay 507e5c89e4eSSatish Balay /* ---------------------------------------------------------------------------- */ 508e5c89e4eSSatish Balay 509e5c89e4eSSatish Balay #undef __FUNCT__ 510e5c89e4eSSatish Balay #define __FUNCT__ "PetscMallocSetDumpLog" 511e5c89e4eSSatish Balay /*@C 512e5c89e4eSSatish Balay PetscMallocSetDumpLog - Activates logging of all calls to PetscMalloc(). 513e5c89e4eSSatish Balay 514e5c89e4eSSatish Balay Not Collective 515e5c89e4eSSatish Balay 516e5c89e4eSSatish Balay Options Database Key: 517574034a9SJed Brown + -malloc_log <filename> - Activates PetscMallocDumpLog() 518574034a9SJed Brown - -malloc_log_threshold <min> - Activates logging and sets a minimum size 519e5c89e4eSSatish Balay 520e5c89e4eSSatish Balay Level: advanced 521e5c89e4eSSatish Balay 522574034a9SJed Brown .seealso: PetscMallocDump(), PetscMallocDumpLog(), PetscMallocSetDumpLogThreshold() 523e5c89e4eSSatish Balay @*/ 5247087cfbeSBarry Smith PetscErrorCode PetscMallocSetDumpLog(void) 525e5c89e4eSSatish Balay { 52621b680ceSJed Brown PetscErrorCode ierr; 52721b680ceSJed Brown 528e5c89e4eSSatish Balay PetscFunctionBegin; 529e5c89e4eSSatish Balay PetscLogMalloc = 0; 530a297a907SKarl Rupp 53121b680ceSJed Brown ierr = PetscMemorySetGetMaximumUsage();CHKERRQ(ierr); 532e5c89e4eSSatish Balay PetscFunctionReturn(0); 533e5c89e4eSSatish Balay } 534e5c89e4eSSatish Balay 535e5c89e4eSSatish Balay #undef __FUNCT__ 536574034a9SJed Brown #define __FUNCT__ "PetscMallocSetDumpLogThreshold" 537574034a9SJed Brown /*@C 538574034a9SJed Brown PetscMallocSetDumpLogThreshold - Activates logging of all calls to PetscMalloc(). 539574034a9SJed Brown 540574034a9SJed Brown Not Collective 541574034a9SJed Brown 542574034a9SJed Brown Input Arguments: 543574034a9SJed Brown . logmin - minimum allocation size to log, or PETSC_DEFAULT 544574034a9SJed Brown 545574034a9SJed Brown Options Database Key: 546574034a9SJed Brown + -malloc_log <filename> - Activates PetscMallocDumpLog() 547574034a9SJed Brown - -malloc_log_threshold <min> - Activates logging and sets a minimum size 548574034a9SJed Brown 549574034a9SJed Brown Level: advanced 550574034a9SJed Brown 551574034a9SJed Brown .seealso: PetscMallocDump(), PetscMallocDumpLog(), PetscMallocSetDumpLog() 552574034a9SJed Brown @*/ 553574034a9SJed Brown PetscErrorCode PetscMallocSetDumpLogThreshold(PetscLogDouble logmin) 554574034a9SJed Brown { 555574034a9SJed Brown PetscErrorCode ierr; 556574034a9SJed Brown 557574034a9SJed Brown PetscFunctionBegin; 558574034a9SJed Brown ierr = PetscMallocSetDumpLog();CHKERRQ(ierr); 559574034a9SJed Brown if (logmin < 0) logmin = 0.0; /* PETSC_DEFAULT or PETSC_DECIDE */ 560574034a9SJed Brown PetscLogMallocThreshold = (size_t)logmin; 561574034a9SJed Brown PetscFunctionReturn(0); 562574034a9SJed Brown } 563574034a9SJed Brown 564574034a9SJed Brown #undef __FUNCT__ 56518a2528dSJed Brown #define __FUNCT__ "PetscMallocGetDumpLog" 56618a2528dSJed Brown /*@C 56718a2528dSJed Brown PetscMallocGetDumpLog - Determine whether all calls to PetscMalloc() are being logged 56818a2528dSJed Brown 56918a2528dSJed Brown Not Collective 57018a2528dSJed Brown 57118a2528dSJed Brown Output Arguments 57218a2528dSJed Brown . logging - PETSC_TRUE if logging is active 57318a2528dSJed Brown 57418a2528dSJed Brown Options Database Key: 57518a2528dSJed Brown . -malloc_log - Activates PetscMallocDumpLog() 57618a2528dSJed Brown 57718a2528dSJed Brown Level: advanced 57818a2528dSJed Brown 57918a2528dSJed Brown .seealso: PetscMallocDump(), PetscMallocDumpLog() 58018a2528dSJed Brown @*/ 58118a2528dSJed Brown PetscErrorCode PetscMallocGetDumpLog(PetscBool *logging) 58218a2528dSJed Brown { 58318a2528dSJed Brown 58418a2528dSJed Brown PetscFunctionBegin; 58518a2528dSJed Brown *logging = (PetscBool)(PetscLogMalloc >= 0); 58618a2528dSJed Brown PetscFunctionReturn(0); 58718a2528dSJed Brown } 58818a2528dSJed Brown 58918a2528dSJed Brown #undef __FUNCT__ 590e5c89e4eSSatish Balay #define __FUNCT__ "PetscMallocDumpLog" 591e5c89e4eSSatish Balay /*@C 592e5c89e4eSSatish Balay PetscMallocDumpLog - Dumps the log of all calls to PetscMalloc(); also calls 59321b680ceSJed Brown PetscMemoryGetMaximumUsage() 594e5c89e4eSSatish Balay 595e5c89e4eSSatish Balay Collective on PETSC_COMM_WORLD 596e5c89e4eSSatish Balay 597e5c89e4eSSatish Balay Input Parameter: 5980298fd71SBarry Smith . fp - file pointer; or NULL 599e5c89e4eSSatish Balay 600e5c89e4eSSatish Balay Options Database Key: 601e5c89e4eSSatish Balay . -malloc_log - Activates PetscMallocDumpLog() 602e5c89e4eSSatish Balay 603e5c89e4eSSatish Balay Level: advanced 604e5c89e4eSSatish Balay 605e5c89e4eSSatish Balay Fortran Note: 606e5c89e4eSSatish Balay The calling sequence in Fortran is PetscMallocDumpLog(integer ierr) 607e5c89e4eSSatish Balay The fp defaults to stdout. 608e5c89e4eSSatish Balay 609e5c89e4eSSatish Balay .seealso: PetscMallocGetCurrentUsage(), PetscMallocDump(), PetscMallocSetDumpLog() 610e5c89e4eSSatish Balay @*/ 6117087cfbeSBarry Smith PetscErrorCode PetscMallocDumpLog(FILE *fp) 612e5c89e4eSSatish Balay { 613e5c89e4eSSatish Balay PetscInt i,j,n,dummy,*perm; 614e5c89e4eSSatish Balay size_t *shortlength; 615f56c2debSBarry Smith int *shortcount,err; 616e5c89e4eSSatish Balay PetscMPIInt rank,size,tag = 1212 /* very bad programming */; 617ace3abfcSBarry Smith PetscBool match; 618e5c89e4eSSatish Balay const char **shortfunction; 619e5c89e4eSSatish Balay PetscLogDouble rss; 620e5c89e4eSSatish Balay MPI_Status status; 621e5c89e4eSSatish Balay PetscErrorCode ierr; 622e5c89e4eSSatish Balay 623e5c89e4eSSatish Balay PetscFunctionBegin; 624e5c89e4eSSatish Balay ierr = MPI_Comm_rank(MPI_COMM_WORLD,&rank);CHKERRQ(ierr); 625e5c89e4eSSatish Balay ierr = MPI_Comm_size(MPI_COMM_WORLD,&size);CHKERRQ(ierr); 626e5c89e4eSSatish Balay /* 627e5c89e4eSSatish Balay Try to get the data printed in order by processor. This will only sometimes work 628e5c89e4eSSatish Balay */ 629f56c2debSBarry Smith err = fflush(fp); 630e32f2f54SBarry Smith if (err) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SYS,"fflush() failed on file"); 631f56c2debSBarry Smith 632e5c89e4eSSatish Balay ierr = MPI_Barrier(MPI_COMM_WORLD);CHKERRQ(ierr); 633e5c89e4eSSatish Balay if (rank) { 634e5c89e4eSSatish Balay ierr = MPI_Recv(&dummy,1,MPIU_INT,rank-1,tag,MPI_COMM_WORLD,&status);CHKERRQ(ierr); 635e5c89e4eSSatish Balay } 636e5c89e4eSSatish Balay 637768aa557SSatish Balay if (PetscLogMalloc < 0) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONGSTATE,"PetscMallocDumpLog() called without call to PetscMallocSetDumpLog() this is often due to\n setting the option -malloc_log AFTER PetscInitialize() with PetscOptionsInsert() or PetscOptionsInsertFile()"); 638768aa557SSatish Balay 639da9f1d6bSBarry Smith if (!fp) fp = PETSC_STDOUT; 640f3d65365SJed Brown ierr = PetscMemoryGetMaximumUsage(&rss);CHKERRQ(ierr); 641e5c89e4eSSatish Balay if (rss) { 642f3d65365SJed Brown ierr = PetscFPrintf(MPI_COMM_WORLD,fp,"[%d] Maximum memory PetscMalloc()ed %.0f maximum size of entire process %.0f\n",rank,(PetscLogDouble)TRMaxMem,rss);CHKERRQ(ierr); 643e5c89e4eSSatish Balay } else { 644e5c89e4eSSatish Balay ierr = PetscFPrintf(MPI_COMM_WORLD,fp,"[%d] Maximum memory PetscMalloc()ed %.0f OS cannot compute size of entire process\n",rank,(PetscLogDouble)TRMaxMem);CHKERRQ(ierr); 645e5c89e4eSSatish Balay } 646e32f2f54SBarry Smith shortcount = (int*)malloc(PetscLogMalloc*sizeof(int));if (!shortcount) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_MEM,"Out of memory"); 647e32f2f54SBarry Smith shortlength = (size_t*)malloc(PetscLogMalloc*sizeof(size_t));if (!shortlength) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_MEM,"Out of memory"); 648e32f2f54SBarry Smith shortfunction = (const char**)malloc(PetscLogMalloc*sizeof(char*));if (!shortfunction) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_MEM,"Out of memory"); 64997b9d747SJed Brown for (i=0,n=0; i<PetscLogMalloc; i++) { 650e5c89e4eSSatish Balay for (j=0; j<n; j++) { 651e5c89e4eSSatish Balay ierr = PetscStrcmp(shortfunction[j],PetscLogMallocFunction[i],&match);CHKERRQ(ierr); 652e5c89e4eSSatish Balay if (match) { 653e5c89e4eSSatish Balay shortlength[j] += PetscLogMallocLength[i]; 65459ffdab8SBarry Smith shortcount[j]++; 655e5c89e4eSSatish Balay goto foundit; 656e5c89e4eSSatish Balay } 657e5c89e4eSSatish Balay } 658e5c89e4eSSatish Balay shortfunction[n] = PetscLogMallocFunction[i]; 659e5c89e4eSSatish Balay shortlength[n] = PetscLogMallocLength[i]; 66059ffdab8SBarry Smith shortcount[n] = 1; 661e5c89e4eSSatish Balay n++; 662e5c89e4eSSatish Balay foundit:; 663e5c89e4eSSatish Balay } 664e5c89e4eSSatish Balay 665e32f2f54SBarry Smith perm = (PetscInt*)malloc(n*sizeof(PetscInt));if (!perm) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_MEM,"Out of memory"); 666e5c89e4eSSatish Balay for (i=0; i<n; i++) perm[i] = i; 667e5c89e4eSSatish Balay ierr = PetscSortStrWithPermutation(n,(const char**)shortfunction,perm);CHKERRQ(ierr); 668e5c89e4eSSatish Balay 669e5c89e4eSSatish Balay ierr = PetscFPrintf(MPI_COMM_WORLD,fp,"[%d] Memory usage sorted by function\n",rank);CHKERRQ(ierr); 670e5c89e4eSSatish Balay for (i=0; i<n; i++) { 67159ffdab8SBarry Smith ierr = PetscFPrintf(MPI_COMM_WORLD,fp,"[%d] %d %.0f %s()\n",rank,shortcount[perm[i]],(PetscLogDouble)shortlength[perm[i]],shortfunction[perm[i]]);CHKERRQ(ierr); 672e5c89e4eSSatish Balay } 673e5c89e4eSSatish Balay free(perm); 674e5c89e4eSSatish Balay free(shortlength); 67559ffdab8SBarry Smith free(shortcount); 676e5c89e4eSSatish Balay free((char**)shortfunction); 677f56c2debSBarry Smith err = fflush(fp); 678e32f2f54SBarry Smith if (err) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SYS,"fflush() failed on file"); 679e5c89e4eSSatish Balay if (rank != size-1) { 680e5c89e4eSSatish Balay ierr = MPI_Send(&dummy,1,MPIU_INT,rank+1,tag,MPI_COMM_WORLD);CHKERRQ(ierr); 681e5c89e4eSSatish Balay } 682e5c89e4eSSatish Balay PetscFunctionReturn(0); 683e5c89e4eSSatish Balay } 684e5c89e4eSSatish Balay 685e5c89e4eSSatish Balay /* ---------------------------------------------------------------------------- */ 686e5c89e4eSSatish Balay 687e5c89e4eSSatish Balay #undef __FUNCT__ 688e5c89e4eSSatish Balay #define __FUNCT__ "PetscMallocDebug" 689e5c89e4eSSatish Balay /*@C 690e5c89e4eSSatish Balay PetscMallocDebug - Turns on/off debugging for the memory management routines. 691e5c89e4eSSatish Balay 692e5c89e4eSSatish Balay Not Collective 693e5c89e4eSSatish Balay 694e5c89e4eSSatish Balay Input Parameter: 695e5c89e4eSSatish Balay . level - PETSC_TRUE or PETSC_FALSE 696e5c89e4eSSatish Balay 697e5c89e4eSSatish Balay Level: intermediate 698e5c89e4eSSatish Balay 699e5c89e4eSSatish Balay .seealso: CHKMEMQ(), PetscMallocValidate() 700e5c89e4eSSatish Balay @*/ 7017087cfbeSBarry Smith PetscErrorCode PetscMallocDebug(PetscBool level) 702e5c89e4eSSatish Balay { 703e5c89e4eSSatish Balay PetscFunctionBegin; 704e5c89e4eSSatish Balay TRdebugLevel = level; 705e5c89e4eSSatish Balay PetscFunctionReturn(0); 706e5c89e4eSSatish Balay } 7070acecf5bSBarry Smith 7080acecf5bSBarry Smith #undef __FUNCT__ 7090acecf5bSBarry Smith #define __FUNCT__ "PetscMallocGetDebug" 7100acecf5bSBarry Smith /*@C 7110acecf5bSBarry Smith PetscMallocGetDebug - Indicates if any PETSc is doing ANY memory debugging. 7120acecf5bSBarry Smith 7130acecf5bSBarry Smith Not Collective 7140acecf5bSBarry Smith 7150acecf5bSBarry Smith Output Parameter: 7160acecf5bSBarry Smith . flg - PETSC_TRUE if any debugger 7170acecf5bSBarry Smith 7180acecf5bSBarry Smith Level: intermediate 7190acecf5bSBarry Smith 7200acecf5bSBarry Smith Note that by default, the debug version always does some debugging unless you run with -malloc no 7210acecf5bSBarry Smith 7220acecf5bSBarry Smith 7230acecf5bSBarry Smith .seealso: CHKMEMQ(), PetscMallocValidate() 7240acecf5bSBarry Smith @*/ 7250acecf5bSBarry Smith PetscErrorCode PetscMallocGetDebug(PetscBool *flg) 7260acecf5bSBarry Smith { 7270acecf5bSBarry Smith PetscFunctionBegin; 7280acecf5bSBarry Smith if (PetscTrMalloc == PetscTrMallocDefault) *flg = PETSC_TRUE; 7290acecf5bSBarry Smith else *flg = PETSC_FALSE; 7300acecf5bSBarry Smith PetscFunctionReturn(0); 7310acecf5bSBarry Smith } 732