src - OpenGrok history log for /libCEED/examples/fluids/src

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8213d101	19-Jun-2023	James Wright <james@jameswright.xyz>	fluids: Remove problem->bc function pointers - Not needed, as essential boundary conditions go through `DMPlexInsertBoundaryValues_NS` or `DMPlexInsertBoundaryValues_StrongBC` /libCEED/examples/fluids/navierstokes.h /libCEED/examples/fluids/problems/advection.c /libCEED/examples/fluids/problems/advection2d.c /libCEED/examples/fluids/problems/eulervortex.c /libCEED/examples/fluids/problems/newtonian.c /libCEED/examples/fluids/problems/shocktube.c setupdm.c
457e73b2	19-Jun-2023	James Wright <james@jameswright.xyz>	fluids: Compatability for PETSc w/ 64bit ints /libCEED/README.md /libCEED/backends/cuda-gen/ceed-cuda-gen-operator-build.cpp /libCEED/backends/cuda-gen/ceed-cuda-gen-operator-build.h /libCEED/backends/cuda-gen/ceed-cuda-gen-operator.c /libCEED/backends/cuda-gen/ceed-cuda-gen.c /libCEED/backends/cuda-ref/ceed-cuda-ref-basis.c /libCEED/backends/cuda-ref/ceed-cuda-ref-operator.c /libCEED/backends/cuda-ref/ceed-cuda-ref-qfunction-load.cpp /libCEED/backends/cuda-ref/ceed-cuda-ref-qfunction-load.h /libCEED/backends/cuda-ref/ceed-cuda-ref-qfunction.c /libCEED/backends/cuda-ref/ceed-cuda-ref.c /libCEED/backends/cuda-ref/ceed-cuda-ref.h /libCEED/backends/cuda-ref/ceed-cuda-restriction.c /libCEED/backends/cuda-ref/ceed-cuda-vector.c /libCEED/backends/cuda-shared/ceed-cuda-shared-basis.c /libCEED/backends/cuda-shared/ceed-cuda-shared.c /libCEED/backends/cuda-shared/kernels/cuda-shared-basis.cu /libCEED/backends/cuda/ceed-cuda-common.c /libCEED/backends/cuda/ceed-cuda-common.h /libCEED/backends/cuda/ceed-cuda-compile.cpp /libCEED/backends/cuda/ceed-cuda-compile.h /libCEED/backends/hip-gen/ceed-hip-gen-operator-build.cpp /libCEED/backends/hip-gen/ceed-hip-gen-operator-build.h /libCEED/backends/hip-gen/ceed-hip-gen-operator.c /libCEED/backends/hip-gen/ceed-hip-gen.c /libCEED/backends/hip-ref/ceed-hip-ref-basis.c /libCEED/backends/hip-ref/ceed-hip-ref-operator.c /libCEED/backends/hip-ref/ceed-hip-ref-qfunction-load.cpp /libCEED/backends/hip-ref/ceed-hip-ref-qfunction-load.h /libCEED/backends/hip-ref/ceed-hip-ref-qfunction.c /libCEED/backends/hip-ref/ceed-hip-ref-restriction.c /libCEED/backends/hip-ref/ceed-hip-ref-vector.c /libCEED/backends/hip-ref/ceed-hip-ref.c /libCEED/backends/hip-ref/ceed-hip-ref.h /libCEED/backends/hip-shared/ceed-hip-shared-basis.c /libCEED/backends/hip-shared/ceed-hip-shared.c /libCEED/backends/hip/ceed-hip-common.c /libCEED/backends/hip/ceed-hip-common.h /libCEED/backends/hip/ceed-hip-compile.cpp /libCEED/backends/hip/ceed-hip-compile.h /libCEED/backends/magma/ceed-magma.h /libCEED/backends/sycl-ref/ceed-sycl-ref-qfunction-load.hpp /libCEED/backends/sycl-ref/ceed-sycl-ref-qfunction-load.sycl.cpp /libCEED/backends/sycl-ref/ceed-sycl-ref-qfunction.sycl.cpp /libCEED/backends/sycl-ref/ceed-sycl-ref.hpp /libCEED/backends/sycl-ref/ceed-sycl-ref.sycl.cpp /libCEED/backends/sycl-shared/ceed-sycl-shared-basis.sycl.cpp /libCEED/backends/sycl-shared/ceed-sycl-shared.sycl.cpp /libCEED/backends/sycl-shared/kernels/sycl-shared-basis.hpp /libCEED/backends/sycl/ceed-sycl-common.hpp /libCEED/backends/sycl/ceed-sycl-common.sycl.cpp /libCEED/backends/sycl/ceed-sycl-compile.hpp /libCEED/backends/sycl/ceed-sycl-compile.sycl.cpp /libCEED/examples/fluids/navierstokes.c /libCEED/examples/fluids/navierstokes.h /libCEED/examples/fluids/problems/blasius.c /libCEED/examples/fluids/problems/sgs_dd_model.c /libCEED/examples/fluids/problems/stg_shur14.c differential_filter.c grid_anisotropy_tensor.c misc.c setuplibceed.c setupts.c turb_spanstats.c velocity_gradient_projection.c /libCEED/include/ceed-impl.h /libCEED/include/ceed/backend.h /libCEED/include/ceed/ceed.h /libCEED/interface/ceed-basis.c /libCEED/interface/ceed.c
ee4ca9cb	20-Jun-2023	James Wright <james@jameswright.xyz>	examples: Use PetscFunctionReturn in PETSC_SUCCESS /libCEED/examples/fluids/problems/advection.c /libCEED/examples/fluids/problems/advection2d.c /libCEED/examples/fluids/problems/blasius.c /libCEED/examples/fluids/problems/channel.c /libCEED/examples/fluids/problems/densitycurrent.c /libCEED/examples/fluids/problems/eulervortex.c /libCEED/examples/fluids/problems/freestream_bc.c /libCEED/examples/fluids/problems/gaussianwave.c /libCEED/examples/fluids/problems/newtonian.c /libCEED/examples/fluids/problems/sgs_dd_model.c /libCEED/examples/fluids/problems/shocktube.c /libCEED/examples/fluids/problems/stg_shur14.c cloptions.c differential_filter.c grid_anisotropy_tensor.c misc.c petsc_ops.c setupdm.c setuplibceed.c setupts.c strong_boundary_conditions.c turb_spanstats.c velocity_gradient_projection.c /libCEED/examples/petsc/bps.c /libCEED/examples/petsc/bpsraw.c /libCEED/examples/petsc/src/libceedsetup.c /libCEED/examples/petsc/src/matops.c /libCEED/examples/petsc/src/petscutils.c /libCEED/examples/solids/problems/finite-strain-mooney-rivlin-initial-1.c /libCEED/examples/solids/problems/finite-strain-neo-hookean-current-1.c /libCEED/examples/solids/problems/finite-strain-neo-hookean-current-2.c /libCEED/examples/solids/problems/finite-strain-neo-hookean-initial-1.c /libCEED/examples/solids/problems/finite-strain-neo-hookean-initial-2.c /libCEED/examples/solids/problems/linear.c /libCEED/examples/solids/problems/mooney-rivlin.c /libCEED/examples/solids/problems/neo-hookean.c /libCEED/examples/solids/problems/problems.c /libCEED/examples/solids/problems/small-strain-neo-hookean.c /libCEED/examples/solids/src/boundary.c /libCEED/examples/solids/src/cl-options.c /libCEED/examples/solids/src/matops.c /libCEED/examples/solids/src/misc.c /libCEED/examples/solids/src/setup-dm.c /libCEED/examples/solids/src/setup-libceed.c
2e6856d5	19-Jun-2023	James Wright <james@jameswright.xyz>	Merge pull request #1236 from CEED/jrwrigh/fluids_event_log fluids: Add CeedOperator PetscLogEvents /libCEED/examples/fluids/navierstokes.c /libCEED/examples/fluids/navierstokes.h misc.c petsc_ops.c setupts.c
75d1798c	19-Jun-2023	James Wright <james@jameswright.xyz>	fluids: Add CeedOperator PetscLogEvents Co-authored-by: Jed Brown <jed@jedbrown.org> /libCEED/Makefile /libCEED/README.md /libCEED/backends/ceed-backend-list.h /libCEED/backends/sycl-ref/ceed-sycl-ref-basis.sycl.cpp /libCEED/backends/sycl-ref/ceed-sycl-ref-operator.sycl.cpp /libCEED/backends/sycl-ref/ceed-sycl-ref-qfunction-load.hpp /libCEED/backends/sycl-ref/ceed-sycl-ref-qfunction-load.sycl.cpp /libCEED/backends/sycl-ref/ceed-sycl-ref-qfunction.sycl.cpp /libCEED/backends/sycl-ref/ceed-sycl-ref-qfunctioncontext.sycl.cpp /libCEED/backends/sycl-ref/ceed-sycl-ref.hpp /libCEED/backends/sycl-ref/ceed-sycl-ref.sycl.cpp /libCEED/backends/sycl-ref/ceed-sycl-restriction.sycl.cpp /libCEED/backends/sycl-ref/ceed-sycl-vector.sycl.cpp /libCEED/backends/sycl-ref/kernels/sycl-ref-vector.hpp /libCEED/backends/sycl-shared/ceed-sycl-shared-basis.sycl.cpp /libCEED/backends/sycl-shared/ceed-sycl-shared.hpp /libCEED/backends/sycl-shared/ceed-sycl-shared.sycl.cpp /libCEED/backends/sycl-shared/kernels/sycl-shared-basis.hpp /libCEED/backends/sycl/ceed-sycl-common.hpp /libCEED/backends/sycl/ceed-sycl-common.sycl.cpp /libCEED/backends/sycl/ceed-sycl-compile.hpp /libCEED/backends/sycl/ceed-sycl-compile.sycl.cpp /libCEED/backends/sycl/ocloc_api.h /libCEED/backends/sycl/online_compiler.hpp /libCEED/backends/sycl/online_compiler.sycl.cpp /libCEED/doc/sphinx/source/conf.py /libCEED/doc/sphinx/source/releasenotes.md /libCEED/examples/ceed/ex1-volume.c /libCEED/examples/fluids/README.md /libCEED/examples/fluids/index.md /libCEED/examples/fluids/navierstokes.c /libCEED/examples/fluids/navierstokes.h /libCEED/examples/fluids/qfunctions/differential_filter.h /libCEED/examples/fluids/qfunctions/sgs_dd_model.h misc.c petsc_ops.c setupts.c /libCEED/include/ceed/jit-source/sycl/sycl-jit.h /libCEED/include/ceed/jit-source/sycl/sycl-ref-qfunction.h /libCEED/include/ceed/jit-source/sycl/sycl-shared-basis-read-write-templates.h /libCEED/include/ceed/jit-source/sycl/sycl-shared-basis-tensor-templates.h /libCEED/include/ceed/jit-source/sycl/sycl-shared-basis-tensor.h /libCEED/include/ceed/jit-source/sycl/sycl-types.h /libCEED/include/ceed/sycl.h /libCEED/interface/ceed-preconditioning.c /libCEED/tests/junit.py
d55646a4	19-Jun-2023	James Wright <james@jameswright.xyz>	fluids: Remove unnecessary state vector write /libCEED/Makefile /libCEED/README.md /libCEED/backends/ceed-backend-list.h /libCEED/backends/sycl-ref/ceed-sycl-ref-basis.sycl.cpp /libCEED/backends/sycl-ref/ceed-sycl-ref-operator.sycl.cpp /libCEED/backends/sycl-ref/ceed-sycl-ref-qfunction-load.hpp /libCEED/backends/sycl-ref/ceed-sycl-ref-qfunction-load.sycl.cpp /libCEED/backends/sycl-ref/ceed-sycl-ref-qfunction.sycl.cpp /libCEED/backends/sycl-ref/ceed-sycl-ref-qfunctioncontext.sycl.cpp /libCEED/backends/sycl-ref/ceed-sycl-ref.hpp /libCEED/backends/sycl-ref/ceed-sycl-ref.sycl.cpp /libCEED/backends/sycl-ref/ceed-sycl-restriction.sycl.cpp /libCEED/backends/sycl-ref/ceed-sycl-vector.sycl.cpp /libCEED/backends/sycl-ref/kernels/sycl-ref-vector.hpp /libCEED/backends/sycl-shared/ceed-sycl-shared-basis.sycl.cpp /libCEED/backends/sycl-shared/ceed-sycl-shared.hpp /libCEED/backends/sycl-shared/ceed-sycl-shared.sycl.cpp /libCEED/backends/sycl-shared/kernels/sycl-shared-basis.hpp /libCEED/backends/sycl/ceed-sycl-common.hpp /libCEED/backends/sycl/ceed-sycl-common.sycl.cpp /libCEED/backends/sycl/ceed-sycl-compile.hpp /libCEED/backends/sycl/ceed-sycl-compile.sycl.cpp /libCEED/backends/sycl/ocloc_api.h /libCEED/backends/sycl/online_compiler.hpp /libCEED/backends/sycl/online_compiler.sycl.cpp /libCEED/doc/sphinx/source/conf.py /libCEED/doc/sphinx/source/releasenotes.md /libCEED/examples/ceed/ex1-volume.c /libCEED/examples/fluids/README.md /libCEED/examples/fluids/index.md /libCEED/examples/fluids/navierstokes.c /libCEED/examples/fluids/navierstokes.h /libCEED/examples/fluids/qfunctions/differential_filter.h /libCEED/examples/fluids/qfunctions/sgs_dd_model.h setupts.c /libCEED/include/ceed/jit-source/sycl/sycl-jit.h /libCEED/include/ceed/jit-source/sycl/sycl-ref-qfunction.h /libCEED/include/ceed/jit-source/sycl/sycl-shared-basis-read-write-templates.h /libCEED/include/ceed/jit-source/sycl/sycl-shared-basis-tensor-templates.h /libCEED/include/ceed/jit-source/sycl/sycl-shared-basis-tensor.h /libCEED/include/ceed/jit-source/sycl/sycl-types.h /libCEED/include/ceed/sycl.h /libCEED/interface/ceed-preconditioning.c /libCEED/tests/junit.py
8400f944	19-Apr-2023	James Wright <james@jameswright.xyz>	DiffFilterFields: Move to separate fields for diff filter - This will allow easier access to the filtered state for later processing /libCEED/examples/fluids/qfunctions/differential_filter.h differential_filter.c
5d94b986	18-Apr-2023	James Wright <james@jameswright.xyz>	DiffFilterFields: Make diff_filter operators compatible with fields /libCEED/examples/fluids/qfunctions/differential_filter.h differential_filter.c
81530087	18-Apr-2023	James Wright <james@jameswright.xyz>	DiffFilterField: Reshuffling of DM Creation passes tests /libCEED/examples/fluids/navierstokes.h differential_filter.c
431cd09a	18-Apr-2023	James Wright <james@jameswright.xyz>	fluids: Specify dm_field in GetRestrictionForDomain /libCEED/doc/sphinx/source/references.bib /libCEED/examples/fluids/README.md /libCEED/examples/fluids/index.md /libCEED/examples/fluids/navierstokes.h /libCEED/examples/fluids/problems/sgs_dd_model.c /libCEED/examples/fluids/qfunctions/freestream_bc.h /libCEED/examples/fluids/qfunctions/newtonian.h /libCEED/examples/fluids/qfunctions/sgs_dd_model.h /libCEED/examples/fluids/qfunctions/velocity_gradient_projection.h differential_filter.c grid_anisotropy_tensor.c setuplibceed.c strong_boundary_conditions.c turb_spanstats.c velocity_gradient_projection.c
2029a677	04-Apr-2023	James Wright <james@jameswright.xyz>	fluids: Add MMS test for differential filtering MMS = method of manufactured solutions /libCEED/examples/fluids/navierstokes.c /libCEED/examples/fluids/navierstokes.h /libCEED/examples/fluids/problems/blasius.c /libCEED/examples/fluids/qfunctions/differential_filter.h differential_filter.c /libCEED/examples/fluids/tests-output/diff_filter_mms_y_spacing.dat /libCEED/examples/fluids/tests-output/fluids-navierstokes-blasius_diff_filter_aniso_vandriest.bin
66e7ee52	03-Apr-2023	James Wright <james@jameswright.xyz>	fluids: Add wall-damping to differential filter /libCEED/examples/fluids/qfunctions/differential_filter.h differential_filter.c
970fa48b	01-Apr-2023	James Wright <james@jameswright.xyz>	fluids: Add isotropic filtering test /libCEED/examples/fluids/navierstokes.c /libCEED/examples/fluids/navierstokes.h differential_filter.c /libCEED/examples/fluids/tests-output/fluids-navierstokes-blasius_diff_filter_iso.bin
4e9802d1	08-Apr-2023	James Wright <james@jameswright.xyz>	fluids: Add differential filtering setup /libCEED/examples/fluids/navierstokes.c /libCEED/examples/fluids/navierstokes.h /libCEED/examples/fluids/qfunctions/differential_filter.h cloptions.c differential_filter.c setuplibceed.c setupts.c
900aec75	03-Apr-2023	James Wright <james@jameswright.xyz>	fluids: Add grid_aniso collocated vector function /libCEED/.clang-tidy /libCEED/.gitlab-ci.yml /libCEED/CODE_OF_CONDUCT.md /libCEED/backends/cuda-ref/ceed-cuda-ref-operator.c /libCEED/backends/hip-ref/ceed-hip-ref-operator.c /libCEED/examples/fluids/blasius.yaml /libCEED/examples/fluids/navierstokes.c /libCEED/examples/fluids/navierstokes.h /libCEED/examples/fluids/problems/blasius.c /libCEED/examples/fluids/problems/freestream_bc.c /libCEED/examples/fluids/problems/sgs_dd_model.c /libCEED/examples/fluids/problems/stg_shur14.c /libCEED/examples/fluids/qfunctions/blasius.h /libCEED/examples/fluids/qfunctions/freestream_bc.h /libCEED/examples/fluids/qfunctions/gaussianwave.h /libCEED/examples/fluids/qfunctions/grid_anisotropy_tensor.h /libCEED/examples/fluids/qfunctions/newtonian.h /libCEED/examples/fluids/qfunctions/newtonian_state.h /libCEED/examples/fluids/qfunctions/sgs_dd_model.h /libCEED/examples/fluids/qfunctions/turb_spanstats.h /libCEED/examples/fluids/qfunctions/utils.h /libCEED/examples/fluids/qfunctions/velocity_gradient_projection.h grid_anisotropy_tensor.c /libCEED/interface/ceed-preconditioning.c /libCEED/interface/ceed-qfunction.c /libCEED/tests/t530-operator.c /libCEED/tests/t531-operator.c /libCEED/tests/t532-operator.c /libCEED/tests/t537-operator.c /libCEED/tests/t538-operator.c /libCEED/tests/t539-operator.c
83ae4962	04-Mar-2023	James Wright <james@jameswright.xyz>	refactor(fluids): Refactor CreateMassQFunction misc.c
fbb546dd	01-Apr-2023	James Wright <james@jameswright.xyz>	fix(fluids): FormSetValues respect pbdiagonal argument - This would allow for the preconditioner to be an assembled pbdiagonal matrix, but the Jacobian to be a full AIJ matrix. setupts.c
186595e6	01-Apr-2023	James Wright <james@jameswright.xyz>	fluids: Rename user->M --> M_inv /libCEED/examples/fluids/navierstokes.c /libCEED/examples/fluids/navierstokes.h setupts.c
9ad5e8e4	01-Apr-2023	James Wright <james@jameswright.xyz>	fluids: Move RHSFunction to petsc-ops /libCEED/examples/fluids/navierstokes.c /libCEED/examples/fluids/navierstokes.h setuplibceed.c setupts.c
dd715608	01-Apr-2023	James Wright <james@jameswright.xyz>	fluids: OperatorApplyContextCreate verify all sizes petsc_ops.c
f0d883e9	30-Mar-2023	James Wright <james@jameswright.xyz>	fluids: Define in/out in docstring params /libCEED/examples/fluids/problems/stg_shur14.c /libCEED/examples/fluids/qfunctions/freestream_bc.h petsc_ops.c
f5452247	30-Mar-2023	James Wright <james@jameswright.xyz>	fluids: Move setup function calls to better locations - Move libCEED operator setup functions to SetupLibceed - Rename turbulence statistics functions to match naming convention /libCEED/examples/fluids/navierstokes.c /libCEED/examples/fluids/navierstokes.h cloptions.c petsc_ops.c setupdm.c setuplibceed.c setupts.c strong_boundary_conditions.c turb_spanstats.c
3221f4d3	29-Mar-2023	James Wright <james@jameswright.xyz>	fluids: Move lumped mass matrix to petsc-ops setupts.c
5263e9c6	29-Mar-2023	James Wright <james@jameswright.xyz>	fluids Move initial conditions -> petsc-ops /libCEED/examples/fluids/navierstokes.c /libCEED/examples/fluids/navierstokes.h misc.c setuplibceed.c
e66242d1	28-Mar-2023	James Wright <james@jameswright.xyz>	fluids: Migrate grid anisotropy and grad_velo to petsc-ops grid_anisotropy_tensor.c velocity_gradient_projection.c
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