fluids - OpenGrok history log for /libCEED/examples/fluids

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2e31f396	06-Jul-2023	James Wright <james@jameswright.xyz>	fluids: Extract simulation printing to function navierstokes.c navierstokes.h src/misc.c
6f7ff1d2	03-Jul-2023	James Wright <james@jameswright.xyz>	fluids: Add partition statistics to standard output include/petsc_ops.h navierstokes.c
0de6a49f	19-Jun-2023	James Wright <james@jameswright.xyz>	fluids: Use 32bit integer for file token - Also code into the token whether PETSc was coded using 32 or 64 bit integers navierstokes.h src/misc.c src/setupts.c
8213d101	19-Jun-2023	James Wright <james@jameswright.xyz>	fluids: Remove problem->bc function pointers - Not needed, as essential boundary conditions go through `DMPlexInsertBoundaryValues_NS` or `DMPlexInsertBoundaryValues_StrongBC` navierstokes.h problems/advection.c problems/advection2d.c problems/eulervortex.c problems/newtonian.c problems/shocktube.c src/setupdm.c
457e73b2	19-Jun-2023	James Wright <james@jameswright.xyz>	fluids: Compatability for PETSc w/ 64bit ints /libCEED/README.md navierstokes.c navierstokes.h problems/blasius.c problems/sgs_dd_model.c problems/stg_shur14.c src/differential_filter.c src/grid_anisotropy_tensor.c src/misc.c src/setuplibceed.c src/setupts.c src/turb_spanstats.c src/velocity_gradient_projection.c /libCEED/interface/ceed-basis.c /libCEED/interface/ceed.c
82bcd3d4	20-Jun-2023	James Wright <james@jameswright.xyz>	Merge pull request #1237 from CEED/jrwrigh/petsc-success examples: Use PETSC_SUCCESS in PetscFunctionReturn problems/advection.c problems/advection2d.c problems/blasius.c problems/channel.c problems/densitycurrent.c problems/eulervortex.c problems/freestream_bc.c problems/gaussianwave.c problems/newtonian.c problems/sgs_dd_model.c problems/shocktube.c problems/stg_shur14.c src/cloptions.c src/differential_filter.c src/grid_anisotropy_tensor.c src/misc.c src/petsc_ops.c src/setupdm.c src/setuplibceed.c src/setupts.c src/strong_boundary_conditions.c src/turb_spanstats.c src/velocity_gradient_projection.c /libCEED/examples/petsc/bps.c /libCEED/examples/petsc/bpsraw.c /libCEED/examples/petsc/src/libceedsetup.c /libCEED/examples/petsc/src/matops.c /libCEED/examples/petsc/src/petscutils.c /libCEED/examples/solids/problems/finite-strain-mooney-rivlin-initial-1.c /libCEED/examples/solids/problems/finite-strain-neo-hookean-current-1.c /libCEED/examples/solids/problems/finite-strain-neo-hookean-current-2.c /libCEED/examples/solids/problems/finite-strain-neo-hookean-initial-1.c /libCEED/examples/solids/problems/finite-strain-neo-hookean-initial-2.c /libCEED/examples/solids/problems/linear.c /libCEED/examples/solids/problems/mooney-rivlin.c /libCEED/examples/solids/problems/neo-hookean.c /libCEED/examples/solids/problems/problems.c /libCEED/examples/solids/problems/small-strain-neo-hookean.c /libCEED/examples/solids/src/boundary.c /libCEED/examples/solids/src/cl-options.c /libCEED/examples/solids/src/matops.c /libCEED/examples/solids/src/misc.c /libCEED/examples/solids/src/setup-dm.c /libCEED/examples/solids/src/setup-libceed.c
ee4ca9cb	20-Jun-2023	James Wright <james@jameswright.xyz>	examples: Use PetscFunctionReturn in PETSC_SUCCESS problems/advection.c problems/advection2d.c problems/blasius.c problems/channel.c problems/densitycurrent.c problems/eulervortex.c problems/freestream_bc.c problems/gaussianwave.c problems/newtonian.c problems/sgs_dd_model.c problems/shocktube.c problems/stg_shur14.c src/cloptions.c src/differential_filter.c src/grid_anisotropy_tensor.c src/misc.c src/petsc_ops.c src/setupdm.c src/setuplibceed.c src/setupts.c src/strong_boundary_conditions.c src/turb_spanstats.c src/velocity_gradient_projection.c /libCEED/examples/petsc/bps.c /libCEED/examples/petsc/bpsraw.c /libCEED/examples/petsc/src/libceedsetup.c /libCEED/examples/petsc/src/matops.c /libCEED/examples/petsc/src/petscutils.c /libCEED/examples/solids/problems/finite-strain-mooney-rivlin-initial-1.c /libCEED/examples/solids/problems/finite-strain-neo-hookean-current-1.c /libCEED/examples/solids/problems/finite-strain-neo-hookean-current-2.c /libCEED/examples/solids/problems/finite-strain-neo-hookean-initial-1.c /libCEED/examples/solids/problems/finite-strain-neo-hookean-initial-2.c /libCEED/examples/solids/problems/linear.c /libCEED/examples/solids/problems/mooney-rivlin.c /libCEED/examples/solids/problems/neo-hookean.c /libCEED/examples/solids/problems/problems.c /libCEED/examples/solids/problems/small-strain-neo-hookean.c /libCEED/examples/solids/src/boundary.c /libCEED/examples/solids/src/cl-options.c /libCEED/examples/solids/src/matops.c /libCEED/examples/solids/src/misc.c /libCEED/examples/solids/src/setup-dm.c /libCEED/examples/solids/src/setup-libceed.c
4b35598d	20-Jun-2023	Jeremy L Thompson <jeremy@jeremylt.org>	Merge pull request #1231 from CEED/jeremy/consistency Consistency fixes /libCEED/backends/cuda-gen/ceed-cuda-gen-operator-build.cpp /libCEED/backends/cuda-gen/ceed-cuda-gen-operator-build.h /libCEED/backends/cuda-gen/ceed-cuda-gen-operator.c /libCEED/backends/cuda-gen/ceed-cuda-gen.c /libCEED/backends/cuda-ref/ceed-cuda-ref-basis.c /libCEED/backends/cuda-ref/ceed-cuda-ref-operator.c /libCEED/backends/cuda-ref/ceed-cuda-ref-qfunction-load.cpp /libCEED/backends/cuda-ref/ceed-cuda-ref-qfunction-load.h /libCEED/backends/cuda-ref/ceed-cuda-ref-qfunction.c /libCEED/backends/cuda-ref/ceed-cuda-ref.c /libCEED/backends/cuda-ref/ceed-cuda-ref.h /libCEED/backends/cuda-ref/ceed-cuda-restriction.c /libCEED/backends/cuda-ref/ceed-cuda-vector.c /libCEED/backends/cuda-shared/ceed-cuda-shared-basis.c /libCEED/backends/cuda-shared/ceed-cuda-shared.c /libCEED/backends/cuda-shared/kernels/cuda-shared-basis.cu /libCEED/backends/cuda/ceed-cuda-common.c /libCEED/backends/cuda/ceed-cuda-common.h /libCEED/backends/cuda/ceed-cuda-compile.cpp /libCEED/backends/cuda/ceed-cuda-compile.h /libCEED/backends/hip-gen/ceed-hip-gen-operator-build.cpp /libCEED/backends/hip-gen/ceed-hip-gen-operator-build.h /libCEED/backends/hip-gen/ceed-hip-gen-operator.c /libCEED/backends/hip-gen/ceed-hip-gen.c /libCEED/backends/hip-ref/ceed-hip-ref-basis.c /libCEED/backends/hip-ref/ceed-hip-ref-operator.c /libCEED/backends/hip-ref/ceed-hip-ref-qfunction-load.cpp /libCEED/backends/hip-ref/ceed-hip-ref-qfunction-load.h /libCEED/backends/hip-ref/ceed-hip-ref-qfunction.c /libCEED/backends/hip-ref/ceed-hip-ref-restriction.c /libCEED/backends/hip-ref/ceed-hip-ref-vector.c /libCEED/backends/hip-ref/ceed-hip-ref.c /libCEED/backends/hip-ref/ceed-hip-ref.h /libCEED/backends/hip-shared/ceed-hip-shared-basis.c /libCEED/backends/hip-shared/ceed-hip-shared.c /libCEED/backends/hip/ceed-hip-common.c /libCEED/backends/hip/ceed-hip-common.h /libCEED/backends/hip/ceed-hip-compile.cpp /libCEED/backends/hip/ceed-hip-compile.h /libCEED/backends/magma/ceed-magma.h /libCEED/backends/sycl-ref/ceed-sycl-ref-qfunction-load.hpp /libCEED/backends/sycl-ref/ceed-sycl-ref-qfunction-load.sycl.cpp /libCEED/backends/sycl-ref/ceed-sycl-ref-qfunction.sycl.cpp /libCEED/backends/sycl-ref/ceed-sycl-ref.hpp /libCEED/backends/sycl-ref/ceed-sycl-ref.sycl.cpp /libCEED/backends/sycl-shared/ceed-sycl-shared-basis.sycl.cpp /libCEED/backends/sycl-shared/ceed-sycl-shared.sycl.cpp /libCEED/backends/sycl-shared/kernels/sycl-shared-basis.hpp /libCEED/backends/sycl/ceed-sycl-common.hpp /libCEED/backends/sycl/ceed-sycl-common.sycl.cpp /libCEED/backends/sycl/ceed-sycl-compile.hpp /libCEED/backends/sycl/ceed-sycl-compile.sycl.cpp navierstokes.c /libCEED/include/ceed-impl.h /libCEED/include/ceed/backend.h /libCEED/include/ceed/ceed.h /libCEED/interface/ceed.c
2e6856d5	19-Jun-2023	James Wright <james@jameswright.xyz>	Merge pull request #1236 from CEED/jrwrigh/fluids_event_log fluids: Add CeedOperator PetscLogEvents navierstokes.c navierstokes.h src/misc.c src/petsc_ops.c src/setupts.c
75d1798c	19-Jun-2023	James Wright <james@jameswright.xyz>	fluids: Add CeedOperator PetscLogEvents Co-authored-by: Jed Brown <jed@jedbrown.org> navierstokes.c navierstokes.h src/misc.c src/petsc_ops.c src/setupts.c
d55646a4	19-Jun-2023	James Wright <james@jameswright.xyz>	fluids: Remove unnecessary state vector write src/setupts.c
5ae360d4	16-Jun-2023	Jeremy L Thompson <jeremy@jeremylt.org>	ceed - make SetStream interface level fn /libCEED/backends/sycl-ref/ceed-sycl-ref.sycl.cpp /libCEED/backends/sycl/ceed-sycl-common.hpp /libCEED/backends/sycl/ceed-sycl-common.sycl.cpp navierstokes.c /libCEED/include/ceed-impl.h /libCEED/include/ceed/ceed.h /libCEED/interface/ceed.c
bd882c8a	15-Jun-2023	James Wright <james@jameswright.xyz>	Add sycl/ref and sycl/shared backends (#1229) * Merge sycl_backend from ALCF fork --------- Co-authored-by: Umesh Unnikrishnan <unnikrishnan@anl.gov> Co-authored-by: Kris Rowe <krowe@anl.gov> Add sycl/ref and sycl/shared backends (#1229) * Merge sycl_backend from ALCF fork --------- Co-authored-by: Umesh Unnikrishnan <unnikrishnan@anl.gov> Co-authored-by: Kris Rowe <krowe@anl.gov> Co-authored-by: Jeremy L Thompson <jeremy@jeremylt.org> show more ... /libCEED/Makefile /libCEED/README.md /libCEED/backends/ceed-backend-list.h /libCEED/backends/sycl-ref/ceed-sycl-ref-basis.sycl.cpp /libCEED/backends/sycl-ref/ceed-sycl-ref-operator.sycl.cpp /libCEED/backends/sycl-ref/ceed-sycl-ref-qfunction-load.hpp /libCEED/backends/sycl-ref/ceed-sycl-ref-qfunction-load.sycl.cpp /libCEED/backends/sycl-ref/ceed-sycl-ref-qfunction.sycl.cpp /libCEED/backends/sycl-ref/ceed-sycl-ref-qfunctioncontext.sycl.cpp /libCEED/backends/sycl-ref/ceed-sycl-ref.hpp /libCEED/backends/sycl-ref/ceed-sycl-ref.sycl.cpp /libCEED/backends/sycl-ref/ceed-sycl-restriction.sycl.cpp /libCEED/backends/sycl-ref/ceed-sycl-vector.sycl.cpp /libCEED/backends/sycl-ref/kernels/sycl-ref-vector.hpp /libCEED/backends/sycl-shared/ceed-sycl-shared-basis.sycl.cpp /libCEED/backends/sycl-shared/ceed-sycl-shared.hpp /libCEED/backends/sycl-shared/ceed-sycl-shared.sycl.cpp /libCEED/backends/sycl-shared/kernels/sycl-shared-basis.hpp /libCEED/backends/sycl/ceed-sycl-common.hpp /libCEED/backends/sycl/ceed-sycl-common.sycl.cpp /libCEED/backends/sycl/ceed-sycl-compile.hpp /libCEED/backends/sycl/ceed-sycl-compile.sycl.cpp /libCEED/backends/sycl/ocloc_api.h /libCEED/backends/sycl/online_compiler.hpp /libCEED/backends/sycl/online_compiler.sycl.cpp /libCEED/doc/sphinx/source/releasenotes.md /libCEED/examples/ceed/ex1-volume.c navierstokes.c navierstokes.h qfunctions/differential_filter.h qfunctions/sgs_dd_model.h /libCEED/include/ceed/jit-source/sycl/sycl-jit.h /libCEED/include/ceed/jit-source/sycl/sycl-ref-qfunction.h /libCEED/include/ceed/jit-source/sycl/sycl-shared-basis-read-write-templates.h /libCEED/include/ceed/jit-source/sycl/sycl-shared-basis-tensor-templates.h /libCEED/include/ceed/jit-source/sycl/sycl-shared-basis-tensor.h /libCEED/include/ceed/jit-source/sycl/sycl-types.h /libCEED/include/ceed/sycl.h /libCEED/interface/ceed-preconditioning.c /libCEED/tests/junit.py
9d9c52bb	05-Jun-2023	Jed Brown <jed@jedbrown.org>	doc: fix math in headers There is a bad hyperref/unicode-math interaction apparently resulting from how PDF bookmarks work. This replaces math in headers (section titles) with unicode Greek letters doc: fix math in headers There is a bad hyperref/unicode-math interaction apparently resulting from how PDF bookmarks work. This replaces math in headers (section titles) with unicode Greek letters to fix doc-latexpdf. https://tex.stackexchange.com/questions/570000/improper-alphabetic-constant-error-in-title-with-greek-bug-with-unicode-math-an show more ... /libCEED/doc/sphinx/source/conf.py README.md index.md
8400f944	19-Apr-2023	James Wright <james@jameswright.xyz>	DiffFilterFields: Move to separate fields for diff filter - This will allow easier access to the filtered state for later processing qfunctions/differential_filter.h src/differential_filter.c
5d94b986	18-Apr-2023	James Wright <james@jameswright.xyz>	DiffFilterFields: Make diff_filter operators compatible with fields qfunctions/differential_filter.h src/differential_filter.c
81530087	18-Apr-2023	James Wright <james@jameswright.xyz>	DiffFilterField: Reshuffling of DM Creation passes tests navierstokes.h src/differential_filter.c
431cd09a	18-Apr-2023	James Wright <james@jameswright.xyz>	fluids: Specify dm_field in GetRestrictionForDomain navierstokes.h problems/sgs_dd_model.c src/differential_filter.c src/grid_anisotropy_tensor.c src/setuplibceed.c src/strong_boundary_conditions.c src/turb_spanstats.c src/velocity_gradient_projection.c
7b69c783	12-Apr-2023	James Wright <james@jameswright.xyz>	refactor(fluids): Make j, k consisitent When doing double for loops, `j` should be components and `k` should be coordinate direction, such that Grad_v[k][j][i] indexes the gradient array coming from refactor(fluids): Make j, k consisitent When doing double for loops, `j` should be components and `k` should be coordinate direction, such that Grad_v[k][j][i] indexes the gradient array coming from libCEED show more ... qfunctions/freestream_bc.h qfunctions/newtonian.h qfunctions/sgs_dd_model.h qfunctions/velocity_gradient_projection.h
3f89fbfd	06-Apr-2023	James Wright <james@jameswright.xyz>	doc(fluids): Add differential filtering /libCEED/doc/sphinx/source/references.bib README.md index.md
2029a677	04-Apr-2023	James Wright <james@jameswright.xyz>	fluids: Add MMS test for differential filtering MMS = method of manufactured solutions navierstokes.h problems/blasius.c qfunctions/differential_filter.h src/differential_filter.c tests-output/diff_filter_mms_y_spacing.dat
020cc818	05-Apr-2023	James Wright <james@jameswright.xyz>	fluids: Add anisotropic filtering test with damping navierstokes.c tests-output/fluids-navierstokes-blasius_diff_filter_aniso_vandriest.bin
66e7ee52	03-Apr-2023	James Wright <james@jameswright.xyz>	fluids: Add wall-damping to differential filter qfunctions/differential_filter.h src/differential_filter.c
970fa48b	01-Apr-2023	James Wright <james@jameswright.xyz>	fluids: Add isotropic filtering test navierstokes.c navierstokes.h src/differential_filter.c tests-output/fluids-navierstokes-blasius_diff_filter_iso.bin
4e9802d1	08-Apr-2023	James Wright <james@jameswright.xyz>	fluids: Add differential filtering setup navierstokes.c navierstokes.h qfunctions/differential_filter.h src/cloptions.c src/differential_filter.c src/setuplibceed.c src/setupts.c
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