fluids: Remove ceed backend from advection.yaml

Due to ordering, this overides the regression tests

Merge pull request #1559 from CEED/jrwrigh/fix_memory_leaks

fix(fluids): Fix primary PETSc memory leak, others

fix(fluids): Fix primary PETSc memory leak, others

All the memory leaks reported in regression tests via `-malloc_dump`
are now related to the boundary conditions and their handling of
QFunctionCont

fix(fluids): Fix primary PETSc memory leak, others

All the memory leaks reported in regression tests via `-malloc_dump`
are now related to the boundary conditions and their handling of
QFunctionContexts, which is a much more difficult problem and will be
addressed later.

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fluids: Rename PetscSmartRedisCall -> PetscCallSmartRedis

fluids: Compute DiffFilter RHS only if solution changes

fluids: Multiple filter widths for SGS training

fluids: Misc cleanup of SmartSim and SGS training

Merge pull request #1557 from CEED/jrwrigh/diffusion_advection

fluids: Add diffusion to advection problem

Merge pull request #1556 from CEED/jrwrigh/fix_doc_warnings

fix: Correct docstring, make parameter name consistent

fix: Correct docstring, make parameter name consistent

test(fluids): Test diffusion in advection

fluids: Add diffusion to advection problem

Merge pull request #1553 from CEED/jrwrigh/ns_stabilized_mass

fluids: Add stabilized mass operator for Newtonian

Merge pull request #1555 from CEED/balin/smartsim

Fixed small bug in sgs_dd_train Q function

fix(fluids): Renable SmartSim testing and fix bug

- Fixed bug in sgs_dd_train QF, left over from debugging
- SmartSim tests were previously not running at all, due to
junit.py checking if `SMARTRE

fix(fluids): Renable SmartSim testing and fix bug

- Fixed bug in sgs_dd_train QF, left over from debugging
- SmartSim tests were previously not running at all, due to
junit.py checking if `SMARTREDIS_DIR` was a file instead of a
directory

Co-authored-by: James Wright <james@jameswright.xyz>

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Merge pull request #1533 from CEED/jrwrigh/smartsim_array_size

fluids: Change SmartSim sizeInfo to show minimum global array size

test(fluids): Test newtonian stabilized mass

refactor(fluids): Use QdataUnpack in Newtonian RHS

fluids: Add stabilized mass matrix to newtonian

Testing with:
```
build/fluids-navierstokes -options_file ./examples/fluids/gaussianwave.yaml -dm_plex_box_faces 10,10,1 -ts_max_steps 500 -degree 2

fluids: Add stabilized mass matrix to newtonian

Testing with:
```
build/fluids-navierstokes -options_file ./examples/fluids/gaussianwave.yaml -dm_plex_box_faces 10,10,1 -ts_max_steps 500 -degree 2 -implicit false -ts_type rk -stab supg -ts_dt 1e-4 -implicit false -ts_monitor_solution cgns:gaussian_wave.cgns -ts_monitor_solution_interval 5 -ts_view -state_var conservative -mass_ksp_type gmres -ts_monitor -mass_pc_type jacobi -mass_pc_jacobi_type diagonal
```

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Merge pull request #1554 from CEED/jrwrigh/petsc_fix_localization

fluids: Update topological periodicity localization

Merge pull request #1543 from CEED/jrwrigh/explicit_stabilized_mass

Fluids: Add stabilized mass operator for advection problem

fluids: Update topological periodicity localization

See https://github.com/CEED/libCEED/issues/1470 for details.
Relies on PETSc MR in https://gitlab.com/petsc/petsc/-/merge_requests/7438

tl;dr is

fluids: Update topological periodicity localization

See https://github.com/CEED/libCEED/issues/1470 for details.
Relies on PETSc MR in https://gitlab.com/petsc/petsc/-/merge_requests/7438

tl;dr is that the localization of the continuous coordinate DM to the
discontinuous coordinate DM (i.e. the cell DM) must be done *after* the
coordinate DM is set to the tensor product ordering

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test(fluids): Add test for advection stabilized mass

ie. SUPG

fluids: Add stabilized mass for advection

This enables "full" SUPG for the advection problem using explicit time
integrators

Efficiently use in-order and out-of-order queues in the SYCL backends (#1456)

* Efficiently use both in-order and out-of-order sycl queues. (#59)

* Default to in-order queues.

* Only order que

Efficiently use in-order and out-of-order queues in the SYCL backends (#1456)

* Efficiently use both in-order and out-of-order sycl queues. (#59)

* Default to in-order queues.

* Only order queue as necessary.

* Use the same queue recursively through a hierarchy of Ceed objects,

* Adds missing changes from previous git-cherry-pick

* Efficiently use both in-order and out-of-order sycl queues. (#59)

* Default to in-order queues.

* Only order queue as necessary.

* Use the same queue recursively through a hierarchy of Ceed objects,

* Adds missing changes from previous git-cherry-pick

* fix formatting errors

* further formatting corrections

* fix formatting errors for merge

* fix errors

* fix errors

---------

Co-authored-by: Kris Rowe <krowe@anl.gov>

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