DMField: interface
DM: fix DMBoundaryTypes declaration
PetscSpace: added PetscSpace Subspace, used for trace spacesThis was previously a property of just polynomial spaces, but PetscSpaceEvaluate() seems tocodify the fact that a PetscSpace has a domai
PetscSpace: added PetscSpace Subspace, used for trace spacesThis was previously a property of just polynomial spaces, but PetscSpaceEvaluate() seems tocodify the fact that a PetscSpace has a domain (NumVariables) and a range (NumComponents), soI'm promoting this property to all spacesPetscSpace: added PetscSpaceGet/SetNumVariables()squash me
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Merge branch 'maint'
Updates for viewing Load Balance informationDon't display for sequential objects. Label all values with "Load Balance"Want to display load balance for petsc ordering for vectors, not using natural
Updates for viewing Load Balance informationDon't display for sequential objects. Label all values with "Load Balance"Want to display load balance for petsc ordering for vectors, not using natural orderingCommit-type: feature
Merge branch 'stefano_zampini/feature-glvis-homesh-periodic'
Converting DMPlex grid generators and refiners to registration processCommit-type: featureTime: 6 hours
DMPlex: Copy over localized coordinates in DMPlexCopyCoordinatesAdd a couple of missing checks in DMPlex{Un}InterpolateFix documentation for coordinatesex4: fix output with coordinatesex1: added
DMPlex: Copy over localized coordinates in DMPlexCopyCoordinatesAdd a couple of missing checks in DMPlex{Un}InterpolateFix documentation for coordinatesex4: fix output with coordinatesex1: added test for periodic case with uninterpolation
DM: return if coordinates have been already localized
started PetscPartitionerMatPartitioning implementation
Merge remote-tracking branch 'origin/barry/fix-hypre-struct'
Merge branch 'master' into knepley/feature-plex-adjoint-prelim* master: (60 commits) petsc4py: update to use latest 3.8 snapshot petsc4py: update to snapshot that syncs with 276c550 fix warni
Merge branch 'master' into knepley/feature-plex-adjoint-prelim* master: (60 commits) petsc4py: update to use latest 3.8 snapshot petsc4py: update to snapshot that syncs with 276c550 fix warning Plex ex26: Protect ExodusII stuff DM: DMCreateSubDM() field argument should be const TS ex46: Newlines and some numerical jitter TS ex45: Newlines and some numerical jitter TS ex11: Fixed indentation and time step numbering SNES ex12: Update for DM view changes Plex tests: Update to new DM output Plex ex23: Use Nc not dim for vector fields Plex: Default section now ignores cells hanging off boundary meshes Plex: Viewer now reports the cell Height Increase patchlevel to 3.8.3 Plex: Fixed DMPlexInterpolate() bugs - Do not copy associated data if we are not interpolating - Do not interpolate if we already have full depth fix valgrind errors with using PetscObjectGetName()/SetName() with the same object - resulting in a free() before copy. ex4: fix compile warning and update makefile Minor fixes Improving report_tests PetscDS: Must initialize the default adjacency ...Conflicts: include/petsc/private/dmimpl.h include/petscdm.h include/petscis.h src/dm/impls/plex/plexcreate.c
MatHYPRESSTRUCT: fix broken classregister HYPRESSTRUCT to be used with SysPFMGAdd missing preallocated flag and set blocksize layoutFix segsegv for PetscOptionsElistAdd multidof option to ex34.c
MatHYPRESSTRUCT: fix broken classregister HYPRESSTRUCT to be used with SysPFMGAdd missing preallocated flag and set blocksize layoutFix segsegv for PetscOptionsElistAdd multidof option to ex34.cThis class still does not work properly when dof > 1. To see this, run ex34.c as./ex34 -da_grid_x 3 -da_grid_y 3 -da_grid_z 3 -da_dof 2 -dump_mat -dm_mat_type hypresstruct -pc_type syspfmg./ex34 -da_grid_x 3 -da_grid_y 3 -da_grid_z 3 -da_dof 2 -dump_mat -dm_mat_type aij -pc_type mgI don't know if the problem is in the MatMult or in MatSetValuesLocal_HYPRESStruct_3d
Merge remote-tracking branch 'origin/knepley/feature-subdm-test'
DM: DMCreateSubDM() field argument should be const
DM: Remove debugging view
Merge branch 'master' into knepley/feature-plex-adjoint-prelim* master: (251 commits) yaml: add a backup download URL Fix documentation of MatSetRandom function Ignore -malloc-hbw option if m
Merge branch 'master' into knepley/feature-plex-adjoint-prelim* master: (251 commits) yaml: add a backup download URL Fix documentation of MatSetRandom function Ignore -malloc-hbw option if malloc is already set Plex: Fixed array initialization pgi: compile fix knl: update test to use memkind and remove option that worked arround a bug with intel 17 Check the return value for memkind_posix_memalign Change the default behavour for -malloc_hbw Bib: More refs test: remove runex13f90 as its now converted to new test suite fix win32 crash. This test was previously run with '-n 4' - so restoring it Fix petscsfgetgraph_ to work for all Fortran compilers by directly using array of PetscSFNodes bugfix for MatDuplicate_MPIAIJ_PtAP Reported-by: Samuel Lanthaler <s.lanthaler@gmail.com> strip out dead sundials usage code; change sundials test to only run 5 timesteps to prevent different number of steps on different systems. Remove extra lines of output file Example uses C99 constructs so must mark with requires: c99 fix const missmatch for DMDAVecRestoreArrayRead() remove conflict between function name in example and new PETSc TS function builds: attempt to do maint/master/next test builds in separate clones ex62: it turned out that CHACO partioning is not deterministic. Use a prescribed partition instead ...Conflicts: src/dm/interface/dm.c src/snes/examples/tutorials/ex13.c
Merge remote-tracking branch 'origin/knepley/fix-plex-proj-ds' into next-tmp
Merge remote-tracking branch 'origin/knepley/fix-l2-projection-submesh' into next-tmp
DM: Check IS block size in DMCreateSubDM()
DM: DMCreateSubDM() should take a const array
Merge branch 'master' into knepley/fix-plex-bc-multiple* master: (347 commits) tests: add 'PETSC_HAVE_C99' flag - so that 'requires: c99' can be used in the test suite PGI: fix build error with
Merge branch 'master' into knepley/fix-plex-bc-multiple* master: (347 commits) tests: add 'PETSC_HAVE_C99' flag - so that 'requires: c99' can be used in the test suite PGI: fix build error with updated 17.10 compilers Fix for test dirs that are not tutorials/tests fix use of double in PetscAbsReal() which produces compiler warnings with single precision build elemental: remove info on conflict of -with-cxx-dialect=C++11 on osx - it works now. Cleanup .bib files Fix allfortranstubs rule to rm generated files from correct directory, not outdated location ierr set but not checked Remove initial refine so test runs faster and does not time out on some machines Gail's copyedits for bibtex items Docs: manual: add further description of 3 different current testing options DM: check for ops->localtolocalbegin/end before calling PetscSF: fix typo in tutorial ex1 Vec+HDF5: Fix output for complex - Need to check for empty group name SNES: SNESDestroy() can be called with snes->dm == NULL SNES: SNESDestroy() can be called with snes->dm == NULL Vec+HDF5: Fix output for complex - Need to check for empty group name Docs: Manual: Update tests section gmakegentest: also exclude .#filenames created by emacs DMPlex: Fix output of test ex1 after changes to Gmsh reader ...
Section: Fix leaks in DMCreateSuperDM()
DM: Use new PetscGlobalMinMaxInt()
DM: Added DMCreateSuperDM()
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