interface - OpenGrok history log for /petsc/src/ksp/pc/interface

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85928a98	27-Jun-2018	Stefano Zampini <stefano.zampini@gmail.com>	Restore Push/Pop model for ASCII viewers /petsc/.gitignore /petsc/config/BuildSystem/RDict.py /petsc/config/BuildSystem/args.py /petsc/config/BuildSystem/config/base.py /petsc/config/BuildSystem/config/compilerOptions.py /petsc/config/BuildSystem/config/compilers.py /petsc/config/BuildSystem/config/framework.py /petsc/config/BuildSystem/config/functions.py /petsc/config/BuildSystem/config/libraries.py /petsc/config/BuildSystem/config/package.py /petsc/config/BuildSystem/config/packages/BlasLapack.py /petsc/config/BuildSystem/config/packages/Chaco.py /petsc/config/BuildSystem/config/packages/Chombo.py /petsc/config/BuildSystem/config/packages/MOAB.py /petsc/config/BuildSystem/config/packages/MPI.py /petsc/config/BuildSystem/config/packages/MPICH.py /petsc/config/BuildSystem/config/packages/MUMPS.py /petsc/config/BuildSystem/config/packages/Matlab.py /petsc/config/BuildSystem/config/packages/MatlabEngine.py 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2cf2a403	11-Jun-2018	Matthew G. Knepley <knepley@gmail.com>	Merge branch 'master' into knepley/feature-pc-patch * master: (562 commits) fix clang-analyzer warning Developers manual never use system randomizers in PETSc and example source code. missing Merge branch 'master' into knepley/feature-pc-patch * master: (562 commits) fix clang-analyzer warning Developers manual never use system randomizers in PETSc and example source code. missing CHKERRQ() DT: Reverting the tgamma change broke MPFR - I guess we need a nightly build with it in Add a test for ex21 Fix error in ex21 Add missing fortran interface that handles null objects DMComposite: add missing guards MatPreallocate: fix overpreallocation of local rows style fixes MatView_MPI_DA: do not print twice the class prefix MatSetOperation: stash the original MatView_XXX in the viewnative function pointer DMCreateInterpolation_DA gracefully error instead of catching FPE signals MatIncreaseOverlap: preserve communicator of index sets MatMPIAIJ: fix indentation and missing CHKERRQ ISBuildTwoSided: remove tabs and fix style Fix documentation PetscViewerDraw: fix unininitialized warning from valgrind MatConvert_SeqAIJ_SeqBAIJ: remove error for non square matrices and add MAT_REUSE_MATRIX case Mat: MAT_INPLACE_MATRIX can be used for transposition with rectangular matrices ... Conflicts: src/dm/dt/interface/dtfe.c src/dm/impls/plex/plex.c src/dm/impls/plex/plexfem.c src/snes/examples/tutorials/ex13.c src/snes/examples/tutorials/ex62.c src/snes/examples/tutorials/makefile src/snes/examples/tutorials/output/ex62_18.out src/snes/examples/tutorials/output/ex62_19.out src/snes/examples/tutorials/output/ex62_20.out src/snes/examples/tutorials/output/ex62_20_parmetis.out src/snes/examples/tutorials/output/ex62_21.out src/snes/examples/tutorials/output/ex62_22.out src/snes/examples/tutorials/output/ex62_23.out src/snes/examples/tutorials/output/ex62_24.out src/snes/examples/tutorials/output/ex62_25.out src/snes/examples/tutorials/output/ex62_26.out src/snes/examples/tutorials/output/ex62_27.out src/snes/examples/tutorials/output/ex62_28.out src/snes/examples/tutorials/output/ex62_29.out src/snes/examples/tutorials/output/ex62_2d_p3_1.out src/snes/examples/tutorials/output/ex62_30.out src/snes/examples/tutorials/output/ex62_31.out 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95452b02	16-Apr-2018	Patrick Sanan <patrick.sanan@gmail.com>	Man pages: add newlines after "Notes:" This allows for proper formatting from sowing. On OS X (using gsed, not the default BSD sed), from the PETSc root directory: find src include -type f \( Man pages: add newlines after "Notes:" This allows for proper formatting from sowing. On OS X (using gsed, not the default BSD sed), from the PETSc root directory: find src include -type f \( -name ".c" -or -name ".h" -or -name ".cxx" \) \| xargs gsed -i 's/Notes\s:\s\(\w.\)/Notes:\n \1/' This adds a newline and 4 spaces whenever "Notes:" is followed by any "word" character, in any .c, .h, or .cxx file in src/ or include/ show more ... /petsc/config/BuildSystem/RDict.py /petsc/config/BuildSystem/args.py /petsc/config/BuildSystem/config/base.py /petsc/config/BuildSystem/config/compilerOptions.py /petsc/config/BuildSystem/config/compilers.py /petsc/config/BuildSystem/config/framework.py /petsc/config/BuildSystem/config/functions.py /petsc/config/BuildSystem/config/libraries.py /petsc/config/BuildSystem/config/package.py /petsc/config/BuildSystem/config/packages/Chaco.py /petsc/config/BuildSystem/config/packages/Chombo.py /petsc/config/BuildSystem/config/packages/MPI.py /petsc/config/BuildSystem/config/packages/MUMPS.py 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e4bc0d72	08-Apr-2018	Matthew G. Knepley <knepley@gmail.com>	Merge branch 'master' into knepley/feature-pc-patch * master: (440 commits) revert sources to dev - reset PETSC_VERSION_RELEASE - reset changes/dev.html release: set v3.9 strings fix grep us Merge branch 'master' into knepley/feature-pc-patch * master: (440 commits) revert sources to dev - reset PETSC_VERSION_RELEASE - reset changes/dev.html release: set v3.9 strings fix grep usage on solaris [use egrep] opensolaris: fix errors Update timer reporting and minor reporting fix Remove redundant if statement. Found by @jedbrown Fixed problem with order of developer photos on website. superlu_dist: use correct flag in example [PETSC_HAVE_SUPERLU -> PETSC_HAVE_SUPERLU_DIST] Bib: PERMON ref fix for osx doc: more author fixes doc: more author fixes Italicized "orderings" in MPI process placement discussion. Added Richard to the user manual author list. Added Richard to the list of active developers on the website. add string check for MS-MPI and IMPI timeout errors opensolaris does not have multiple grep utils - but default one does not support -F. So use fgrep instead Standardizing timeout checks Report wall clock time of total tests Use time instead of date %s ... Conflicts: include/petscpc.h src/ksp/ksp/interface/itfunc.c show more ... /petsc/.travis.yml /petsc/bitbucket-pipelines.yml /petsc/config/BuildSystem/RDict.py /petsc/config/BuildSystem/args.py /petsc/config/BuildSystem/config/base.py /petsc/config/BuildSystem/config/compilerOptions.py /petsc/config/BuildSystem/config/compilers.py /petsc/config/BuildSystem/config/framework.py /petsc/config/BuildSystem/config/functions.py /petsc/config/BuildSystem/config/libraries.py /petsc/config/BuildSystem/config/package.py /petsc/config/BuildSystem/config/packages/Chaco.py /petsc/config/BuildSystem/config/packages/Chombo.py /petsc/config/BuildSystem/config/packages/MPI.py /petsc/config/BuildSystem/config/packages/MUMPS.py /petsc/config/BuildSystem/config/packages/MatlabEngine.py /petsc/config/BuildSystem/config/packages/OpenMPI.py /petsc/config/BuildSystem/config/packages/PARTY.py /petsc/config/BuildSystem/config/packages/PTScotch.py /petsc/config/BuildSystem/config/packages/PaStiX.py 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d13c9127	29-Mar-2018	Karl Rupp <me@karlrupp.net>	Merge branch 'karlrupp/feature-remove-cusp' * karlrupp/feature-remove-cusp: Removes VECCUSP vectors and AIJCUSP matrices, because they provide no added benefit over VECCUDA and AIJCUSPARSE. Also rem Merge branch 'karlrupp/feature-remove-cusp' * karlrupp/feature-remove-cusp: Removes VECCUSP vectors and AIJCUSP matrices, because they provide no added benefit over VECCUDA and AIJCUSPARSE. Also removes the CUSP-based preconditioners for now. SACUSP will be re-added later, after the new release is out. show more ... /petsc/.travis.yml /petsc/bitbucket-pipelines.yml /petsc/config/BuildSystem/config/packages/cuda.py /petsc/config/BuildSystem/config/packages/make.py /petsc/config/PETSc/Configure.py /petsc/config/cmakegen.py /petsc/config/example_template.py /petsc/config/gmakegen.py /petsc/config/gmakegentest.py /petsc/config/install.py /petsc/config/petsc_harness.sh /petsc/config/testparse.py /petsc/gmakefile /petsc/gmakefile.test /petsc/include/petsc/finclude/petscmat.h /petsc/include/petsc/finclude/petscpc.h /petsc/include/petsc/finclude/petscvec.h /petsc/include/petsc/private/matimpl.h /petsc/include/petsc/private/petscimpl.h /petsc/include/petsc/private/vecimpl.h /petsc/include/petscdraw.h /petsc/include/petscmat.h /petsc/include/petscmath.h /petsc/include/petscpc.h /petsc/include/petscpctypes.h /petsc/include/petscsys.h /petsc/include/petscvec.h /petsc/include/petscviewer.h /petsc/lib/petsc/conf/rules /petsc/makefile /petsc/src/dm/examples/tests/ex1.c /petsc/src/dm/examples/tests/output/ex1_cuda1.out /petsc/src/dm/examples/tests/output/ex1_cuda2.out /petsc/src/dm/impls/plex/plexdistribute.c /petsc/src/dm/interface/dm.c /petsc/src/docs/tex/manual/developers.tex /petsc/src/docs/tex/manual/part1.tex /petsc/src/docs/website/documentation/faq.html /petsc/src/docs/website/features/gpus.html /petsc/src/ksp/ksp/examples/tests/ex43.c /petsc/src/ksp/ksp/examples/tutorials/ex2.c /petsc/src/ksp/ksp/examples/tutorials/ex27.c /petsc/src/ksp/ksp/examples/tutorials/ex46.c /petsc/src/ksp/ksp/examples/tutorials/ex7.c /petsc/src/ksp/ksp/examples/tutorials/ex70.c /petsc/src/ksp/ksp/examples/tutorials/makefile /petsc/src/ksp/ksp/examples/tutorials/output/ex46_aijcusparse_2.out /petsc/src/ksp/ksp/examples/tutorials/output/ex7_mpiaijcusparse.out /petsc/src/ksp/ksp/examples/tutorials/output/ex7_mpiaijcusparse_2.out /petsc/src/ksp/ksp/examples/tutorials/output/ex7_mpiaijcusparse_3.out /petsc/src/ksp/ksp/examples/tutorials/output/ex7_mpiaijcusparse_4.out /petsc/src/ksp/ksp/examples/tutorials/output/ex7_mpiaijcusparse_simple.out /petsc/src/ksp/ksp/examples/tutorials/output/ex7_mpiaijcusparse_simple_2.out /petsc/src/ksp/pc/impls/bjacobi/bjacobi.c /petsc/src/ksp/pc/impls/makefile pcregis.c /petsc/src/mat/examples/tests/ex125.c /petsc/src/mat/f90-mod/petscmat.h /petsc/src/mat/impls/aij/mpi/makefile /petsc/src/mat/impls/aij/mpi/mpicusparse/mpiaijcusparse.cu /petsc/src/mat/impls/aij/mpi/mpiviennacl/mpiaijviennacl.cxx /petsc/src/mat/impls/aij/mpi/superlu_dist/superlu_dist.c /petsc/src/mat/impls/aij/seq/aij.c /petsc/src/mat/impls/aij/seq/aijmkl/aijmkl.c /petsc/src/mat/impls/aij/seq/makefile /petsc/src/mat/impls/aij/seq/seqcusparse/aijcusparse.cu /petsc/src/mat/impls/aij/seq/seqviennacl/aijviennacl.cxx /petsc/src/mat/interface/dlregismat.c /petsc/src/mat/interface/matregis.c /petsc/src/mat/interface/matrix.c /petsc/src/mat/order/sorder.c /petsc/src/mat/utils/axpy.c /petsc/src/snes/examples/tutorials/ex12.c /petsc/src/snes/examples/tutorials/ex16.c /petsc/src/snes/examples/tutorials/ex19.c /petsc/src/snes/examples/tutorials/ex47cu.cu /petsc/src/snes/examples/tutorials/output/ex16_1.out /petsc/src/snes/examples/tutorials/output/ex16_2.out /petsc/src/snes/examples/tutorials/output/ex16_3.out /petsc/src/snes/examples/tutorials/output/ex19_cuda.out /petsc/src/sys/classes/draw/interface/draw.c /petsc/src/sys/classes/draw/interface/ftn-custom/zdrawf.c /petsc/src/sys/classes/viewer/impls/draw/drawv.c /petsc/src/sys/objects/init.c /petsc/src/tao/examples/tutorials/ex3.c /petsc/src/tao/unconstrained/examples/tutorials/burgers_spectral.c /petsc/src/ts/examples/tutorials/ex31.c /petsc/src/ts/examples/tutorials/ex50.c /petsc/src/vec/vec/examples/tests/ex4.c /petsc/src/vec/vec/examples/tests/ex44.c /petsc/src/vec/vec/impls/mpi/makefile /petsc/src/vec/vec/impls/mpi/mpicuda/mpicuda.cu /petsc/src/vec/vec/impls/mpi/mpiviennacl/mpiviennacl.cxx /petsc/src/vec/vec/impls/seq/makefile /petsc/src/vec/vec/impls/seq/seqcuda/veccuda.c /petsc/src/vec/vec/impls/seq/seqcuda/veccuda2.cu /petsc/src/vec/vec/impls/seq/seqviennacl/vecviennacl.cxx /petsc/src/vec/vec/interface/dlregisvec.c /petsc/src/vec/vec/interface/rvector.c /petsc/src/vec/vec/interface/vecregall.c /petsc/src/vec/vec/interface/vector.c /petsc/src/vec/vec/makefile /petsc/src/vec/vec/utils/vpscat.h /petsc/src/vec/vec/utils/vpscat_mpi1.h /petsc/src/vec/vec/utils/vscat.c
0bbffbc0	27-Mar-2018	Karl Rupp <me@karlrupp.net>	Merge branch 'stefano_zampini/fix-matis-dmda-l2g' /petsc/.travis.yml /petsc/bitbucket-pipelines.yml /petsc/config/BuildSystem/config/packages/ctetgen.py /petsc/config/BuildSystem/config/packages/mkl_sparse_sp2m.py /petsc/config/BuildSystem/config/setCompilers.py /petsc/config/PETSc/Configure.py /petsc/config/PETSc/options/installDir.py /petsc/config/PETSc/options/petscdir.py /petsc/config/examples/arch-cray-xc40-knl-opt.py /petsc/config/examples/arch-linux-knl.py /petsc/config/gmakegentest.py /petsc/config/install.py /petsc/include/petsc/private/dmdaimpl.h /petsc/include/petsc/private/dmimpl.h /petsc/include/petsc/private/dmswarmimpl.h /petsc/include/petsc/private/kspimpl.h /petsc/include/petsc/private/sfimpl.h /petsc/include/petscdmda.h /petsc/include/petscdmplex.h /petsc/include/petscksp.h /petsc/include/petscsf.h /petsc/include/petsctao.h /petsc/include/petscversion.h /petsc/lib/petsc/bin/maint/builddist 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e9e886b6	27-Mar-2018	Karl Rupp <me@karlrupp.net>	CUSP: Removed VECCUSP and AIJCUSP as well as preconditioners. 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23819d05	20-Mar-2018	Matthew G. Knepley <knepley@gmail.com>	Merge branch 'master' into knepley/feature-pc-patch * master: (33 commits) cleanup very ugly PCGAMG manual page minor clarifications for VecScatterCreate() manual page gcov: PETSC_ARCH is requ Merge branch 'master' into knepley/feature-pc-patch * master: (33 commits) cleanup very ugly PCGAMG manual page minor clarifications for VecScatterCreate() manual page gcov: PETSC_ARCH is required onlyfor -run_gcov - and not for -merge_gcov [where it doesn't exist] make clearer in help statements what --with-external-packages-dir is for. Website: Added news entry for PETSc User Meeting 2018 on main page. KSPGUESSPOD: exclude negative of zero eigenvalues from the energy computation KSPGUESSFISCHER: use PetscInfo for KSP class CUDA: Further test output fixes for mat_tests-ex2 Turn off elemental test for parmetis running since this does not work on batch systems. 3.8 Changes: KSPCHEBYSHEV CUDA: Fixed most test errors due to MatMultTranspose* KSPFGMRES: add KSP_NORM_NONE / PC_RIGHT as supported KSPSetSupportedNorm man page: remove old note about default support for KSP_NORM_NONE Dev manual: copyedit DMPlexDistributeLabels: Propagate the output flag cuda/cusp: update minimum supported versions of cuda to 7.5 and cusp to 0.5.0 cuda: remove configure option -with-cuda-arch. [use CUDAFLAGS instead] projected gradient code fixed to obey recent convergence test changed Merge conflicts resolved after rebase norm update bug fixed in GPGC, test output reverted ... show more ... /petsc/config/BuildSystem/config/framework.py /petsc/config/BuildSystem/config/packages/cuda.py /petsc/config/BuildSystem/config/packages/cusp.py /petsc/config/BuildSystem/config/packages/elemental.py /petsc/config/BuildSystem/config/setCompilers.py /petsc/config/PETSc/Configure.py /petsc/config/configure.py /petsc/config/examples/arch-cuda-double.py /petsc/config/examples/arch-cuda-single.py /petsc/config/testparse.py /petsc/include/petsctao.h /petsc/lib/petsc/bin/maint/buildtest /petsc/lib/petsc/bin/maint/gcov.py /petsc/makefile /petsc/src/dm/impls/plex/plex.c /petsc/src/dm/impls/plex/plexdistribute.c /petsc/src/dm/impls/plex/plexhdf5.c /petsc/src/docs/tex/manual/developers.tex /petsc/src/docs/website/documentation/changes/38.html /petsc/src/docs/website/documentation/changes/dev.html /petsc/src/docs/website/documentation/installation.html /petsc/src/docs/website/images/todd.jpg /petsc/src/docs/website/index.html /petsc/src/docs/website/miscellaneous/index.html /petsc/src/ksp/ksp/examples/tutorials/ex27.c /petsc/src/ksp/ksp/guess/impls/fischer/fischer.c /petsc/src/ksp/ksp/guess/impls/pod/pod.c /petsc/src/ksp/ksp/impls/gmres/fgmres/fgmres.c /petsc/src/ksp/ksp/interface/iguess.c /petsc/src/ksp/ksp/interface/itcreate.c /petsc/src/ksp/ksp/interface/itfunc.c /petsc/src/ksp/pc/impls/gamg/gamg.c /petsc/src/ksp/pc/impls/patch/pcpatch.c precon.c /petsc/src/mat/examples/tests/ex2.c /petsc/src/mat/examples/tests/ex5.c /petsc/src/mat/examples/tests/output/ex2_23.out /petsc/src/mat/examples/tests/output/ex5_11_A.out /petsc/src/mat/examples/tests/output/ex5_11_B.out /petsc/src/mat/examples/tests/output/ex5_21.out /petsc/src/mat/examples/tests/output/ex5_23.out /petsc/src/mat/examples/tests/output/ex5_31.out /petsc/src/mat/examples/tests/output/ex5_33.out /petsc/src/mat/impls/aij/seq/seqcusparse/aijcusparse.cu /petsc/src/mat/impls/aij/seq/seqcusparse/cusparsematimpl.h /petsc/src/tao/bound/impls/blmvm/blmvm.c /petsc/src/tao/bound/impls/bqpip/bqpip.c /petsc/src/tao/bound/impls/gpcg/gpcg.c /petsc/src/tao/bound/impls/pgd/pgd.c /petsc/src/tao/bound/impls/tron/tron.c /petsc/src/tao/complementarity/impls/asls/asfls.c /petsc/src/tao/complementarity/impls/asls/asils.c /petsc/src/tao/complementarity/impls/ssls/ssfls.c /petsc/src/tao/complementarity/impls/ssls/ssils.c /petsc/src/tao/constrained/examples/tutorials/output/toy_1.out /petsc/src/tao/constrained/examples/tutorials/output/toyf_1.out /petsc/src/tao/constrained/examples/tutorials/toy.c /petsc/src/tao/constrained/examples/tutorials/toyf.F90 /petsc/src/tao/constrained/impls/ipm/ipm.c /petsc/src/tao/interface/taosolver.c /petsc/src/tao/leastsquares/impls/pounders/pounders.c /petsc/src/tao/pde_constrained/impls/lcl/lcl.c /petsc/src/tao/unconstrained/impls/bmrm/bmrm.c /petsc/src/tao/unconstrained/impls/cg/taocg.c /petsc/src/tao/unconstrained/impls/lmvm/lmvm.c /petsc/src/tao/unconstrained/impls/neldermead/neldermead.c /petsc/src/tao/unconstrained/impls/nls/nls.c /petsc/src/tao/unconstrained/impls/ntl/ntl.c /petsc/src/tao/unconstrained/impls/ntr/ntr.c /petsc/src/tao/unconstrained/impls/owlqn/owlqn.c /petsc/src/ts/examples/tutorials/ex3.c /petsc/src/ts/examples/tutorials/output/ex3_fischer_guess.out /petsc/src/ts/examples/tutorials/output/ex3_fischer_guess_2.out /petsc/src/ts/examples/tutorials/output/ex3_pod_guess.out /petsc/src/ts/examples/tutorials/output/ex3_pod_guess_Ainner.out /petsc/src/vec/vec/utils/vscat.c
db9745e2	17-Mar-2018	Barry Smith <bsmith@mcs.anl.gov>	cleanup very ugly PCGAMG manual page Commit-type: documentation /petsc/.gitignore /petsc/.travis.yml /petsc/config/BuildSystem/RDict.py /petsc/config/BuildSystem/config/compilerOptions.py /petsc/config/BuildSystem/config/framework.py /petsc/config/BuildSystem/config/packages/cuda.py /petsc/config/BuildSystem/config/packages/cusp.py /petsc/config/BuildSystem/config/packages/elemental.py /petsc/config/BuildSystem/config/packages/exodusii.py /petsc/config/BuildSystem/config/packages/pnetcdf.py /petsc/config/BuildSystem/config/setCompilers.py /petsc/config/PETSc/Configure.py /petsc/config/PETSc/options/arch.py /petsc/config/PETSc/options/installDir.py /petsc/config/configure.py /petsc/config/examples/arch-cuda-double.py /petsc/config/examples/arch-cuda-single.py /petsc/config/examples/arch-mswin-gnu.py /petsc/config/install.py /petsc/include/makefile /petsc/include/petsc/private/dmimpl.h /petsc/include/petsc/private/kernels/petscaxpy.h 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4bbf5ea8	12-Mar-2018	Matthew G. Knepley <knepley@gmail.com>	PCPatch: Initial checkin Contributed-by: Patrick Farrell <patrick.farrell@maths.ox.ac.uk> This PC uses mesh traversal to assemble particular ASM PCs, such as Vanka smoothers. /petsc/.gitignore /petsc/.travis.yml /petsc/config/BuildSystem/RDict.py /petsc/config/BuildSystem/config/compilerOptions.py /petsc/config/BuildSystem/config/framework.py /petsc/config/BuildSystem/config/packages/cuda.py /petsc/config/BuildSystem/config/packages/cusp.py /petsc/config/BuildSystem/config/packages/exodusii.py /petsc/config/BuildSystem/config/packages/pnetcdf.py /petsc/config/PETSc/Configure.py /petsc/config/PETSc/options/arch.py /petsc/config/PETSc/options/installDir.py /petsc/config/configure.py /petsc/config/examples/arch-cuda-double.py /petsc/config/examples/arch-mswin-gnu.py /petsc/config/install.py /petsc/include/makefile /petsc/include/petsc/private/dmimpl.h /petsc/include/petsc/private/kernels/petscaxpy.h /petsc/include/petsc/private/pcmgimpl.h 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63b15415	27-Feb-2018	Alp Dener <adener@mcs.anl.gov>	Wrapping up for a pull request /petsc/src/dm/interface/dm.c /petsc/src/ksp/ksp/interface/itcreate.c /petsc/src/ksp/ksp/interface/iterativ.c precon.c /petsc/src/snes/interface/snes.c /petsc/src/snes/linesearch/interface/linesearch.c /petsc/src/tao/bound/impls/blmvm/blmvm.c /petsc/src/tao/bound/impls/bqpip/bqpip.c /petsc/src/tao/bound/impls/gpcg/gpcg.c /petsc/src/tao/bound/impls/tron/tron.c /petsc/src/tao/complementarity/impls/asls/asfls.c /petsc/src/tao/complementarity/impls/asls/asils.c /petsc/src/tao/complementarity/impls/ssls/ssfls.c /petsc/src/tao/complementarity/impls/ssls/ssils.c /petsc/src/tao/constrained/impls/ipm/ipm.c /petsc/src/tao/interface/taosolver.c /petsc/src/tao/leastsquares/impls/pounders/pounders.c /petsc/src/tao/linesearch/interface/taolinesearch.c /petsc/src/tao/matrix/lmvmmat.c /petsc/src/tao/pde_constrained/impls/lcl/lcl.c /petsc/src/tao/unconstrained/impls/cg/taocg.c /petsc/src/tao/unconstrained/impls/lmvm/lmvm.c /petsc/src/tao/unconstrained/impls/nls/nls.c /petsc/src/tao/unconstrained/impls/ntl/ntl.c /petsc/src/tao/unconstrained/impls/ntr/ntr.c /petsc/src/tao/unconstrained/impls/owlqn/owlqn.c /petsc/src/ts/interface/ts.c
19b5c101	27-Feb-2018	Alp Dener <adener@mcs.anl.gov>	All views changed to inherit tab levels from associated objects /petsc/config/BuildSystem/config/packages/MPI.py /petsc/config/BuildSystem/config/packages/sowing.py /petsc/config/PETSc/Configure.py /petsc/config/PETSc/options/petscclone.py /petsc/config/PETSc/options/petscdir.py /petsc/config/configure.py /petsc/config/examples/arch-mswin-borland.py /petsc/config/examples/arch-mswin-cxx-cmplx.py /petsc/config/examples/arch-mswin.py /petsc/config/gmakegentest.py /petsc/config/install.py /petsc/config/testparse.py /petsc/include/petsccuda.h /petsc/include/petsccusp.h /petsc/include/petscsys.h /petsc/lib/petsc/bin/PetscBinaryIO.py /petsc/lib/petsc/bin/PetscBinaryIOTrajectory.py /petsc/lib/petsc/bin/PetscBinaryIO_tests.py /petsc/lib/petsc/bin/maint/PetscStaticFunctionCandidates.py /petsc/lib/petsc/bin/maint/bk2darcs.py /petsc/lib/petsc/bin/maint/bk2hg.py /petsc/lib/petsc/bin/maint/branches.py /petsc/lib/petsc/bin/maint/bugReport.py 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011ea8ae	25-Feb-2018	Barry Smith <bsmith@mcs.anl.gov>	get rid of unneeded PC_ApplyOnMproc, fix manual page for parallel blocks for PCBJACOBI Commit-type: style-fix, documentation /petsc/.mailmap /petsc/bin/maint/buildtest /petsc/bin/maint/confignightly/cg /petsc/bin/maint/confignightly/cg2 /petsc/bin/maint/confignightly/cg3 /petsc/bin/maint/confignightly/cg4 /petsc/bin/maint/confignightly/churn /petsc/bin/maint/confignightly/churn2 /petsc/bin/maint/confignightly/churn3 /petsc/bin/maint/confignightly/crank /petsc/bin/maint/confignightly/crank2 /petsc/bin/maint/confignightly/crank3 /petsc/bin/maint/confignightly/crush /petsc/bin/maint/confignightly/crush2 /petsc/bin/maint/confignightly/crush3 /petsc/bin/maint/confignightly/default /petsc/bin/maint/confignightly/el6 /petsc/bin/maint/confignightly/el6-2 /petsc/bin/maint/confignightly/el6-3 /petsc/bin/maint/confignightly/el6-4 /petsc/bin/maint/confignightly/es /petsc/bin/maint/confignightly/es2 /petsc/bin/maint/confignightly/es3 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84f58adf	18-Feb-2018	Stefano Zampini <stefano.zampini@gmail.com>	PC: fix memory leak in PCComputeExplicitOperator /petsc/.travis.yml /petsc/bin/maint/builddist /petsc/bin/maint/buildtest /petsc/bin/maint/confignightly/default /petsc/config/BuildSystem/config/compilers.py /petsc/config/BuildSystem/config/framework.py /petsc/config/BuildSystem/config/libraries.py /petsc/config/BuildSystem/config/packages/BlasLapack.py /petsc/config/BuildSystem/config/packages/exodusii.py /petsc/config/BuildSystem/config/packages/hwloc.py /petsc/config/BuildSystem/config/packages/hypre.py /petsc/config/BuildSystem/config/packages/metis.py /petsc/config/BuildSystem/config/packages/mkl_cpardiso.py /petsc/config/BuildSystem/config/packages/mkl_pardiso.py /petsc/config/BuildSystem/config/packages/mkl_sparse.py /petsc/config/BuildSystem/config/packages/mkl_sparse_optimize.py /petsc/config/BuildSystem/config/packages/openblas.py /petsc/config/BuildSystem/config/packages/petsc4py.py 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13903a91	30-Sep-2017	Satish Balay <balay@mcs.anl.gov>	fix: redundant CHKERRQ() call after SETERRQ() Craycc complained about a stray CHKERRQ after SETERRQ in plextree.c Reported-by: Patrick Sanan <patrick.sanan@gmail.com> /petsc/.gitignore /petsc/.gitmessage /petsc/.travis.yml /petsc/README.md /petsc/bin/PetscBinaryIO.py /petsc/bin/PetscBinaryIOTrajectory.py /petsc/bin/maint/branches.py /petsc/bin/maint/builddist /petsc/bin/maint/buildtest /petsc/bin/maint/checkBuilds.py /petsc/bin/maint/confignightly/churn /petsc/bin/maint/confignightly/crank3 /petsc/bin/maint/confignightly/el6 /petsc/bin/maint/confignightly/knl /petsc/bin/maint/confignightly/knl2 /petsc/bin/maint/confignightly/ps4 /petsc/bin/maint/confignightly/ps4-3 /petsc/bin/maint/confignightly/ps4-5 /petsc/bin/maint/confignightly/wii /petsc/bin/maint/confignightly/wii3 /petsc/bin/maint/convertExamples.py /petsc/bin/maint/convertExamplesUtils.py /petsc/bin/maint/examplesMkParse.py /petsc/bin/maint/examplesWalker.py 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8066bbec	12-Jan-2017	Barry Smith <bsmith@mcs.anl.gov>	Have Chebyshev view eigenvalues computed via eigest before transformation Fix Eisenstat PC so that it can generate eigenvalue estimates without noisy right hand side /petsc/.gitignore /petsc/bin/FASTMathInstaller.py /petsc/bin/maint/builddist /petsc/bin/maint/buildtest /petsc/bin/maint/createpatch /petsc/bin/maint/findvisibleprivatefunctions /petsc/config/BuildSystem/config/package.py /petsc/config/BuildSystem/config/packages/BlasLapack.py /petsc/config/BuildSystem/config/packages/SuperLU.py /petsc/config/BuildSystem/config/packages/SuperLU_DIST.py /petsc/config/BuildSystem/config/packages/alquimia.py /petsc/config/BuildSystem/config/packages/boost.py /petsc/config/BuildSystem/config/packages/ctetgen.py /petsc/config/BuildSystem/config/packages/f2cblaslapack.py /petsc/config/BuildSystem/config/packages/fblaslapack.py /petsc/config/BuildSystem/config/packages/med.py /petsc/config/BuildSystem/config/packages/mkl_cpardiso.py 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390e1bf2	25-Dec-2016	Barry Smith <bsmith@mcs.anl.gov>	Minor cleanup, remove some outdated code, remove unneeded constructs, improve manual pages slightly, add missing test case Time: 2.5 hours /petsc/bin/maint/toclapack.sh /petsc/config/BuildSystem/config/compilerOptions.py /petsc/config/BuildSystem/config/package.py /petsc/config/BuildSystem/config/packages/BlasLapack.py /petsc/config/BuildSystem/config/packages/MUMPS.py /petsc/config/BuildSystem/config/packages/f2cblaslapack.py /petsc/config/BuildSystem/config/packages/openblas.py /petsc/config/BuildSystem/config/packages/petsc4py.py /petsc/config/PETSc/Configure.py /petsc/config/PETSc/options/scalarTypes.py /petsc/include/petsc/mpiuni/mpi.h /petsc/include/petsc/private/fortranimpl.h /petsc/include/petsc/private/kspimpl.h /petsc/include/petsc/private/matimpl.h /petsc/include/petsc/private/petscimpl.h /petsc/include/petscblaslapack.h /petsc/include/petscblaslapack_mangle.h /petsc/include/petscmat.h /petsc/include/petscmath.h 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fbfcfee5	19-Dec-2016	Barry Smith <bsmith@mcs.anl.gov>	Remove the use and definition of __FUNCT__ throughout the code Since all modern C/C++ compilers provide this functionality we no longer need to provide it manually in PETSc Time: 1.5 hours Thanks-t Remove the use and definition of __FUNCT__ throughout the code Since all modern C/C++ compilers provide this functionality we no longer need to provide it manually in PETSc Time: 1.5 hours Thanks-to: Andreas Mang <andreas@ices.utexas.edu> show more ... /petsc/bin/maint/buildtest /petsc/bin/maint/confignightly/ps4-2 /petsc/bin/maint/confignightly/ps4-3 /petsc/bin/maint/confignightly/ps4-4 /petsc/bin/maint/petsc-val.supp /petsc/bin/maint/toclapack.sh /petsc/config/BuildSystem/config/compilerOptions.py /petsc/config/BuildSystem/config/package.py /petsc/config/BuildSystem/config/packages/Chombo.py /petsc/config/BuildSystem/config/packages/MOAB.py /petsc/config/BuildSystem/config/packages/MPICH.py 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3033ae51	01-Dec-2016	Barry Smith <bsmith@mcs.anl.gov>	Fix some code that produced valgrind errors in Fortran code 1) fix some incorrect custom Fortran interfaces 2) remove CHKFORTRANNULLOBJECT(ctx); checks which serve no purpose and produce false va Fix some code that produced valgrind errors in Fortran code 1) fix some incorrect custom Fortran interfaces 2) remove CHKFORTRANNULLOBJECT(ctx); checks which serve no purpose and produce false valgrind errors 3) initialize some PETSc objects in Fortran examples to prevent false valgrind errors Reported-by: nightly tests show more ... /petsc/.gitignore /petsc/include/petsc/finclude/petscsysdef.h /petsc/include/petsc/private/fortranimpl.h /petsc/include/petscsys.h /petsc/lib/petsc/conf/bfort-petsc.txt /petsc/src/ksp/ksp/examples/tutorials/ex15f.F /petsc/src/ksp/ksp/examples/tutorials/ex21f.F /petsc/src/ksp/ksp/examples/tutorials/ex2f.F /petsc/src/ksp/ksp/examples/tutorials/ex54f.F /petsc/src/ksp/ksp/interface/ftn-custom/zdmkspf.c /petsc/src/ksp/ksp/interface/ftn-custom/zitclf.c ftn-custom/zpreconf.c /petsc/src/mat/examples/tests/ex120f.F /petsc/src/mat/examples/tests/ex171f.F /petsc/src/mat/f90-mod/petscmatmod.F /petsc/src/mat/impls/mffd/ftn-custom/zmffdf.c /petsc/src/mat/interface/ftn-custom/zmatrixf.c /petsc/src/snes/examples/tests/ex12f.F /petsc/src/snes/examples/tests/ex1f.F /petsc/src/snes/examples/tutorials/ex5f.F /petsc/src/snes/examples/tutorials/ex5f90t.F90 /petsc/src/snes/examples/tutorials/ex5fs.F /petsc/src/snes/examples/tutorials/ex73f90t.F90 /petsc/src/snes/interface/ftn-custom/zsnesf.c /petsc/src/sys/makefile /petsc/src/tao/interface/ftn-custom/ztaosolverf.c /petsc/src/tao/leastsquares/examples/tutorials/chwirut1f.F /petsc/src/tao/leastsquares/examples/tutorials/chwirut2f.h /petsc/src/tao/unconstrained/examples/tutorials/eptorsion2f.F /petsc/src/vec/vec/interface/ftn-custom/zvectorf.c
1b266c99	20-Nov-2016	Barry Smith <bsmith@mcs.anl.gov>	Updated and simplified Fortran interface Reduced from 4 distinct approaches to using PETSc from Fortran to 1 No more .h90 files (Fortran 90 functionality is now always available) Parameters and func Updated and simplified Fortran interface Reduced from 4 distinct approaches to using PETSc from Fortran to 1 No more .h90 files (Fortran 90 functionality is now always available) Parameters and function prototypes are now provide through Fortran modules, not includes; only #define are provided in the petscXXXdef.h files PETSc objects can be declared as either type(tXXX) or XXX. For example type(tVec) or Vec Moved now private Fortran include files out of public include directory since uses don't use them; they are only used to generate the Fortran modules Easier to support and test; we can now easily add more function prototypes Also had to rework generation of manual pages to consistently use MANSEC and SUBMANSEC since these variables also handle how the Fortran modules are generated. 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/petsc/src/vec/vec/examples/tutorials/ex4f90.F90 /petsc/src/vec/vec/examples/tutorials/ex7f.F /petsc/src/vec/vec/examples/tutorials/ex9f.F /petsc/src/vec/vec/examples/tutorials/makefile /petsc/src/vec/vec/interface/ftn-custom/zvectorf.c /petsc/src/vec/vec/interface/rvector.c /petsc/src/vec/vec/interface/vector.c /petsc/src/vec/vec/utils/projection.c /petsc/src/vec/vec/utils/vpscat.c /petsc/tutorials/python/ex1f.F
70baa948	11-Oct-2016	Karl Rupp <rupp@iue.tuwien.ac.at>	ViennaCL: Added "row-scaling" preconditioner. This is a simple Jacobi-like diagonal preconditioner. The preconditioner computes the norms of each row of the system matrix and uses these values for t ViennaCL: Added "row-scaling" preconditioner. This is a simple Jacobi-like diagonal preconditioner. The preconditioner computes the norms of each row of the system matrix and uses these values for the diagonal of the preconditioner matrix. In contrast to PETSc's native Jacobi preconditioner, this preconditioner bypasses a couple of unnecessary host-device transfers (via e.g. PCI-Express) for GPUs. show more ... /petsc/config/BuildSystem/config/packages/viennacl.py /petsc/include/petscpctypes.h /petsc/src/ksp/pc/impls/bjacobi/bjacobi.c /petsc/src/ksp/pc/impls/makefile /petsc/src/ksp/pc/impls/rowscalingviennacl/makefile /petsc/src/ksp/pc/impls/rowscalingviennacl/rowscalingviennacl.cxx /petsc/src/ksp/pc/impls/rowscalingviennaclcuda/makefile /petsc/src/ksp/pc/impls/rowscalingviennaclcuda/rowscalingviennacl.cu pcregis.c /petsc/src/mat/impls/aij/seq/seqcusp/aijcusp.cu /petsc/src/mat/impls/aij/seq/seqviennacl/aijviennacl.cxx /petsc/src/mat/interface/dlregismat.c /petsc/src/vec/vec/interface/rvector.c
4b3f184c	27-Sep-2016	Karl Rupp <rupp@iue.tuwien.ac.at>	ViennaCL: Added parallel ILU preconditioner as proposed by Chow and Patel. See paper "Fine-Grained Parallel Incomplete LU Factorization", SIAM SISC 37(2) http://epubs.siam.org/doi/abs/10.1137/140968 ViennaCL: Added parallel ILU preconditioner as proposed by Chow and Patel. See paper "Fine-Grained Parallel Incomplete LU Factorization", SIAM SISC 37(2) http://epubs.siam.org/doi/abs/10.1137/140968896 Example for running with OpenCL with KSP ex2: ./ex2 -mat_type aijviennacl -vec_type viennacl -pc_type chowiluviennacl -viennacl_view -viennacl_backend opencl show more ... /petsc/include/petscpctypes.h /petsc/src/ksp/pc/impls/chowiluviennacl/chowiluviennacl.cxx /petsc/src/ksp/pc/impls/chowiluviennacl/makefile /petsc/src/ksp/pc/impls/chowiluviennaclcuda/chowiluviennacl.cu /petsc/src/ksp/pc/impls/chowiluviennaclcuda/makefile /petsc/src/ksp/pc/impls/makefile pcregis.c
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