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2479783c06-Sep-2020 Jose E. Roman <jroman@dsic.upv.es>

Fix several typos in error strings


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/petsc/src/vec/vec/impls/mpi/mpicuda/mpicuda.cu
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/petsc/src/vec/vec/utils/comb.c
ee30046326-Aug-2020 Satish Balay <balay@mcs.anl.gov>

doc: fix build errors


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/petsc/systems/Apple/OSX/bin/makedmg
/petsc/systems/Apple/OSX/bin/makeframework
/petsc/systems/Apple/OSX/examples/PETSc cocoa example/PETSc cocoa example/AppDelegate.m
/petsc/systems/Apple/OSX/examples/PETSc command line example/PETSc command line example/main.c
/petsc/systems/Apple/iOS/bin/makedmg
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2c9ac21516-Mar-2020 Satish Balay <balay@mcs.anl.gov>

Merge branch 'mark/tsadapt-add-interfaces' into 'master'

add interface for ts_adapt_scale_solve_failed

See merge request petsc/petsc!2583


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tsadapt.c
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62c23b2816-Mar-2020 Mark <cal2princeton@yahoo.com>

add interface for ts_adapt_scale_solve_failed


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tsadapt.c
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/petsc/src/vec/vec/impls/mpi/pdvec.c
/petsc/src/vec/vec/impls/seq/bvec2.c
/petsc/src/vec/vec/impls/seq/seqcuda/cudavecimpl.h
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f253e43c09-Mar-2020 Lisandro Dalcin <dalcinl@gmail.com>

PetscBinaryWrite: Remove `istemp` boolean flag


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/petsc/src/vec/is/utils/isio.c
/petsc/src/vec/vec/examples/tests/ex20f.F
/petsc/src/vec/vec/examples/tutorials/ex2f.F
/petsc/src/vec/vec/examples/tutorials/ex6.c
/petsc/src/vec/vec/examples/tutorials/ex6f.F90
/petsc/src/vec/vec/impls/mpi/mpicuda/mpicuda.cu
/petsc/src/vec/vec/impls/mpi/pdvec.c
/petsc/src/vec/vec/impls/seq/bvec2.c
/petsc/src/vec/vec/impls/seq/seqcuda/cudavecimpl.h
/petsc/src/vec/vec/impls/seq/seqcuda/veccuda.c
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/petsc/src/vec/vec/interface/rvector.c
/petsc/src/vec/vec/interface/vector.c
/petsc/src/vec/vec/utils/vecio.c
19caf8f321-Feb-2020 Satish Balay <balay@mcs.anl.gov>

Remove usage of PETSC_HAVE_FORTRAN_STDCALL, PETSC_BLASLAPACK_STDCALL, HAVE_FORTRAN_MIXED_STR_ARG flags - as Compaq f90 compiler is no longer supported


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/petsc/src/vec/vscat/examples/output/ex8_1.out
/petsc/src/vec/vscat/examples/output/ex8_2.out
/petsc/src/vec/vscat/impls/mpi1/vpscat_mpi1.h
/petsc/src/vec/vscat/impls/mpi3/makefile
/petsc/src/vec/vscat/impls/mpi3/vpscat.h
/petsc/src/vec/vscat/impls/seq/seqvscat.c
/petsc/src/vec/vscat/impls/sf/vscatsf.c
/petsc/src/vec/vscat/impls/vscat.c
/petsc/src/vec/vscat/interface/dlregisvecscat.c
/petsc/src/vec/vscat/interface/ftn-custom/zvscatfcef.c
/petsc/src/vec/vscat/interface/vscatfce.c
/petsc/src/vec/vscat/interface/vscreate.c
6bc98fa902-Sep-2019 Barry Smith <bsmith@mcs.anl.gov>

Improve manual page for TSSetFunctionDomainError(), include references for handling related domain errors in underlying SNESSolve()

TSAdapte monitor and -info now report rejection of timesteps due t

Improve manual page for TSSetFunctionDomainError(), include references for handling related domain errors in underlying SNESSolve()

TSAdapte monitor and -info now report rejection of timesteps due to user provided TSSetFunctionDomainError()s

Add new question to FAQ on handling infeasible (out of domain) states in TS and SNES

Commit-type: style-fix, feature, documentation
Reported-by: Steve <stevenbenbow@quintessa.org>

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/petsc/src/vec/vec/impls/seq/seqcuda/cudavecimpl.h
/petsc/src/vec/vec/impls/seq/seqcuda/veccuda.c
/petsc/src/vec/vec/impls/seq/seqcuda/veccuda2.cu
/petsc/src/vec/vec/impls/seq/seqcuda/vecscattercuda.cu
/petsc/src/vec/vec/impls/seq/seqviennacl/vecviennacl.cxx
/petsc/src/vec/vec/impls/shared/shvec.c
/petsc/src/vec/vec/interface/ftn-custom/zvectorf.c
/petsc/src/vec/vec/interface/rvector.c
/petsc/src/vec/vec/interface/vector.c
/petsc/src/vec/vec/utils/comb.c
/petsc/src/vec/vec/utils/matlab/gcreatev.c
/petsc/src/vec/vec/utils/tagger/impls/cdf.c
/petsc/src/vec/vec/utils/tagger/interface/tagger.c
/petsc/src/vec/vec/utils/vecio.c
/petsc/src/vec/vec/utils/vecmpitoseq.c
/petsc/src/vec/vec/utils/vinv.c
/petsc/src/vec/vscat/examples/ex4.c
/petsc/src/vec/vscat/examples/ex8.c
/petsc/src/vec/vscat/examples/ex9.c
/petsc/src/vec/vscat/examples/makefile
/petsc/src/vec/vscat/examples/output/ex8_1.out
/petsc/src/vec/vscat/examples/output/ex8_2.out
/petsc/src/vec/vscat/examples/output/ex9_1.out
/petsc/src/vec/vscat/examples/output/ex9_2.out
/petsc/src/vec/vscat/examples/output/ex9_3.out
/petsc/src/vec/vscat/impls/mpi1/vpscat_mpi1.c
/petsc/src/vec/vscat/impls/mpi3/vpscat.c
/petsc/src/vec/vscat/impls/seq/seqvscat.c
/petsc/src/vec/vscat/impls/sf/vscatsf.c
/petsc/src/vec/vscat/impls/vscat.c
/petsc/src/vec/vscat/interface/dlregisvecscat.c
/petsc/src/vec/vscat/interface/vscatfce.c
/petsc/src/vec/vscat/interface/vscreate.c
d083f84901-Jun-2019 Barry Smith <bsmith@mcs.anl.gov>

Update the use of Collective on in the manual pages to reflect the new style

Commit-type: style-fix, documentation
Thanks-to: Patrick Sanan <patrick.sanan@gmail.com>


/petsc/.gitignore
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tsadapt.c
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/petsc/src/vec/is/sf/interface/sf.c
/petsc/src/vec/is/utils/isltog.c
/petsc/src/vec/is/utils/pmap.c
/petsc/src/vec/is/utils/vsectionis.c
/petsc/src/vec/pf/interface/pf.c
/petsc/src/vec/vec/impls/mpi/commonmpvec.c
/petsc/src/vec/vec/impls/mpi/mpicuda/mpicuda.cu
/petsc/src/vec/vec/impls/mpi/pbvec.c
/petsc/src/vec/vec/impls/mpi/vmpicr.c
/petsc/src/vec/vec/impls/seq/bvec2.c
/petsc/src/vec/vec/impls/seq/seqcuda/veccuda.c
/petsc/src/vec/vec/impls/seq/seqviennacl/vecviennacl.cxx
/petsc/src/vec/vec/impls/seq/vseqcr.c
/petsc/src/vec/vec/impls/shared/shvec.c
/petsc/src/vec/vec/interface/rvector.c
/petsc/src/vec/vec/interface/veccreate.c
/petsc/src/vec/vec/interface/vector.c
/petsc/src/vec/vec/utils/vinv.c
/petsc/src/vec/vscat/interface/vscatfce.c
/petsc/src/vec/vscat/interface/vscreate.c
bfcb38ea27-May-2019 Patrick Sanan <patrick.sanan@gmail.com>

Man pages: remove .keywords: fields

This field is recognized by doctext from Sowing (http://wgropp.cs.illinois.edu/projects/software/sowing/doctext/node20.htm#Node20),
but it doesn't seem to be unif

Man pages: remove .keywords: fields

This field is recognized by doctext from Sowing (http://wgropp.cs.illinois.edu/projects/software/sowing/doctext/node20.htm#Node20),
but it doesn't seem to be uniformly used or maintained.

Thus, remove all .keywords: fields, and a following blank line, if present.

This is accomplished with GNU sed (gsed on OS X), with the following commands.
*Warning* that this type of command can corrupt a .git directory,
so be cautious in reusing or modifying these commands. They first look
for and delete matching lines with a following line consisting of only whitespace,
and then delete any remaining matching lines.

find src/ -type f -exec gsed -i '/keywords:/ {N; /\n\s*$/d}' {} +
find src/ -type f -exec gsed -i '/keywords:/d' {} +
find include/ -type f -exec gsed -i '/keywords:/ {N; /\n\s*$/d}' {} +
find include/ -type f -exec gsed -i '/keywords:/d' {} +

Hints on the sed command obtained from: https://unix.stackexchange.com/questions/100754/how-to-delete-a-specific-line-and-the-following-blank-line-using-gnu-sed

show more ...


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/petsc/src/ts/examples/tutorials/output/ex51_3bs.out
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/petsc/src/ts/examples/tutorials/power_grid/ex3.c
/petsc/src/ts/examples/tutorials/power_grid/ex3.h
/petsc/src/ts/examples/tutorials/power_grid/ex3opt.c
/petsc/src/ts/examples/tutorials/power_grid/ex3opt_fd.c
/petsc/src/ts/examples/tutorials/power_grid/ex3sa.c
/petsc/src/ts/examples/tutorials/power_grid/ex5.c
/petsc/src/ts/examples/tutorials/power_grid/ex9adj.c
/petsc/src/ts/examples/tutorials/power_grid/ex9opt.c
/petsc/src/ts/examples/tutorials/power_grid/makefile
/petsc/src/ts/examples/tutorials/power_grid/output/ex3sa_1.out
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/petsc/src/ts/examples/tutorials/power_grid/stability_9bus/ex9bus.c
/petsc/src/ts/examples/tutorials/power_grid/stability_9bus/ex9busdmnetwork.c
/petsc/src/ts/examples/tutorials/power_grid/stability_9bus/ex9busopt.c
/petsc/src/ts/examples/tutorials/power_grid/stability_9bus/makefile
/petsc/src/ts/impls/arkimex/arkimex.c
/petsc/src/ts/impls/explicit/rk/rk.c
/petsc/src/ts/impls/explicit/rk/rk.h
/petsc/src/ts/impls/explicit/ssp/ssp.c
/petsc/src/ts/impls/glee/glee.c
/petsc/src/ts/impls/implicit/glle/glle.c
/petsc/src/ts/impls/implicit/glle/glleadapt.c
/petsc/src/ts/impls/implicit/sundials/sundials.c
/petsc/src/ts/impls/implicit/theta/theta.c
/petsc/src/ts/impls/multirate/mprk.c
/petsc/src/ts/impls/pseudo/posindep.c
/petsc/src/ts/impls/python/pythonts.c
/petsc/src/ts/impls/rosw/rosw.c
/petsc/src/ts/impls/symplectic/basicsymplectic/basicsymplectic.c
/petsc/src/ts/interface/dlregists.c
/petsc/src/ts/interface/sensitivity/tssen.c
/petsc/src/ts/interface/ts.c
/petsc/src/ts/interface/tscreate.c
/petsc/src/ts/interface/tseig.c
/petsc/src/ts/interface/tsreg.c
/petsc/src/ts/interface/tsregall.c
/petsc/src/ts/interface/tsrhssplit.c
/petsc/src/ts/trajectory/impls/basic/trajbasic.c
/petsc/src/ts/trajectory/impls/memory/trajmemory.c
/petsc/src/ts/trajectory/interface/traj.c
/petsc/src/ts/utils/dmplexts.c
/petsc/src/vec/is/ao/impls/basic/aobasic.c
/petsc/src/vec/is/ao/impls/mapping/aomapping.c
/petsc/src/vec/is/ao/impls/memscalable/aomemscalable.c
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/petsc/src/vec/is/is/impls/general/general.c
/petsc/src/vec/is/is/impls/stride/stride.c
/petsc/src/vec/is/is/interface/index.c
/petsc/src/vec/is/is/interface/isreg.c
/petsc/src/vec/is/is/interface/isregall.c
/petsc/src/vec/is/sf/examples/tests/ex2.c
/petsc/src/vec/is/sf/examples/tests/makefile
/petsc/src/vec/is/sf/examples/tests/output/ex2_1.out
/petsc/src/vec/is/sf/examples/tutorials/ex1.c
/petsc/src/vec/is/sf/impls/basic/sfbasic.c
/petsc/src/vec/is/sf/interface/dlregissf.c
/petsc/src/vec/is/sf/interface/sf.c
/petsc/src/vec/is/sf/interface/sfregi.c
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/petsc/src/vec/is/utils/hdf5io.c
/petsc/src/vec/is/utils/isio.c
/petsc/src/vec/is/utils/isltog.c
/petsc/src/vec/is/utils/isltog.h
/petsc/src/vec/is/utils/makefile
/petsc/src/vec/is/utils/pmap.c
/petsc/src/vec/is/utils/vsectionis.c
/petsc/src/vec/pf/interface/pf.c
/petsc/src/vec/pf/interface/pfall.c
/petsc/src/vec/vec/examples/tests/ex31.c
/petsc/src/vec/vec/examples/tests/ex46.c
/petsc/src/vec/vec/examples/tests/ex49.c
/petsc/src/vec/vec/examples/tests/makefile
/petsc/src/vec/vec/examples/tests/output/ex49_1.out
/petsc/src/vec/vec/examples/tutorials/ex11f.F
/petsc/src/vec/vec/examples/tutorials/ex11f90.F90
/petsc/src/vec/vec/examples/tutorials/ex12f.F90
/petsc/src/vec/vec/examples/tutorials/ex16f.F90
/petsc/src/vec/vec/examples/tutorials/ex18.c
/petsc/src/vec/vec/examples/tutorials/ex18f.F90
/petsc/src/vec/vec/examples/tutorials/ex5f.F90
/petsc/src/vec/vec/examples/tutorials/ex6.c
/petsc/src/vec/vec/examples/tutorials/ex6f.F90
/petsc/src/vec/vec/examples/tutorials/ex8f.F90
/petsc/src/vec/vec/examples/tutorials/output/ex11f90_1.out
/petsc/src/vec/vec/examples/tutorials/output/ex11f_1.out
/petsc/src/vec/vec/impls/mpi/mpiviennacl/mpiviennacl.cxx
/petsc/src/vec/vec/impls/mpi/pbvec.c
/petsc/src/vec/vec/impls/mpi/pdvec.c
/petsc/src/vec/vec/impls/mpi/pvecimpl.h
/petsc/src/vec/vec/impls/seq/bvec1.c
/petsc/src/vec/vec/impls/seq/seqcuda/cudavecimpl.h
/petsc/src/vec/vec/impls/seq/seqcuda/veccuda2.cu
/petsc/src/vec/vec/impls/seq/seqcuda/vecscattercuda.cu
/petsc/src/vec/vec/impls/seq/seqviennacl/vecviennacl.cxx
/petsc/src/vec/vec/interface/dlregisvec.c
/petsc/src/vec/vec/interface/rvector.c
/petsc/src/vec/vec/interface/veccreate.c
/petsc/src/vec/vec/interface/vecreg.c
/petsc/src/vec/vec/interface/vecregall.c
/petsc/src/vec/vec/interface/vector.c
/petsc/src/vec/vec/utils/tagger/interface/tagger.c
/petsc/src/vec/vec/utils/tagger/interface/taggerregi.c
/petsc/src/vec/vec/utils/vecio.c
/petsc/src/vec/vec/utils/vinv.c
/petsc/src/vec/vscat/examples/ex9.c
/petsc/src/vec/vscat/examples/makefile
/petsc/src/vec/vscat/examples/output/ex9_1.out
/petsc/src/vec/vscat/interface/dlregisvecscat.c
/petsc/src/vec/vscat/interface/vscreate.c
76cddca126-Apr-2019 Emil Constantinescu <emconsta@mcs.anl.gov>

Add docs and interface for setting/getting -ts_adapt_max_ignore. And update output files


/petsc/include/petscts.h
tsadapt.c
/petsc/src/ts/examples/tutorials/advection-diffusion-reaction/output/ex1_1.out
/petsc/src/ts/examples/tutorials/advection-diffusion-reaction/output/ex2_1.out
/petsc/src/ts/examples/tutorials/advection-diffusion-reaction/output/ex2_1_alt.out
/petsc/src/ts/examples/tutorials/advection-diffusion-reaction/output/ex2_1_alt_2.out
/petsc/src/ts/examples/tutorials/advection-diffusion-reaction/output/ex2_1_alt_3.out
/petsc/src/ts/examples/tutorials/advection-diffusion-reaction/output/ex2_1_alt_4.out
/petsc/src/ts/examples/tutorials/advection-diffusion-reaction/output/ex3_1.out
/petsc/src/ts/examples/tutorials/advection-diffusion-reaction/output/ex3_1_alt.out
/petsc/src/ts/examples/tutorials/advection-diffusion-reaction/output/ex3_1_alt_2.out
/petsc/src/ts/examples/tutorials/advection-diffusion-reaction/output/ex3_1_alt_3.out
/petsc/src/ts/examples/tutorials/advection-diffusion-reaction/output/ex3_1_alt_4.out
/petsc/src/ts/examples/tutorials/advection-diffusion-reaction/output/ex4_1.out
/petsc/src/ts/examples/tutorials/advection-diffusion-reaction/output/ex5_1.out
/petsc/src/ts/examples/tutorials/ex31.c
/petsc/src/ts/examples/tutorials/output/ex31_4_alt.out
/petsc/src/ts/interface/ts.c
1c167fc225-Apr-2019 Emil Constantinescu <emconsta@mcs.anl.gov>

adding support for GLEE methods to use local error controler when using GLEE adaptor; add testing with ex31.c; adding max ignore in the error calculation

adding support for GLEE methods to use local

adding support for GLEE methods to use local error controler when using GLEE adaptor; add testing with ex31.c; adding max ignore in the error calculation

adding support for GLEE methods to use local error controler when using GLEE adaptor; add testing with ex31.c; adding max ignore in the error calculation

fixing some example output to match the new TSAdapt Viewer

correcting some hardwired values and adding a macro for repeated code

show more ...


/petsc/src/ts/adapt/impls/glee/adaptglee.c
tsadapt.c
/petsc/src/ts/examples/tutorials/ex31.c
/petsc/src/ts/examples/tutorials/output/ex19_pi42.out
/petsc/src/ts/examples/tutorials/output/ex31_3.out
/petsc/src/ts/examples/tutorials/output/ex31_4.out
/petsc/src/ts/examples/tutorials/output/ex3_3.out
/petsc/src/ts/interface/ts.c
d580f01124-Apr-2019 Emil Constantinescu <emconsta@mcs.anl.gov>

Adding option for adaptors to ignore values smaller than a preset absolute value. Any negative value will ignore it.


/petsc/Jenkinsfile
/petsc/config/BuildSystem/config/base.py
/petsc/config/BuildSystem/config/compilers.py
/petsc/config/BuildSystem/config/framework.py
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/petsc/config/examples/misc/arch-arm64-opt.py
/petsc/config/examples/misc/arch-armv7-opt.py
/petsc/config/examples/misc/arch-bgp-ibm-opt.py
/petsc/config/examples/misc/arch-cray-xt5-opt.py
/petsc/config/examples/misc/arch-cray-xt6-pkgs-opt.py
/petsc/config/examples/misc/arch-fusion-intel-c-opt.py
/petsc/config/examples/misc/arch-linux-gcc-absoft.py
/petsc/config/examples/misc/arch-linux-gcc-real-env.py
/petsc/config/examples/misc/arch-linux-gcc-real-opt.py
/petsc/config/examples/misc/arch-linux-gcc-real.py
/petsc/config/examples/misc/arch-linux-gxx-complex.py
/petsc/config/examples/misc/arch-linux-mkl-IPL64.py
/petsc/config/examples/misc/arch-linux-mpich1.py
/petsc/config/examples/misc/arch-linux-xsdk-latest.py
/petsc/config/examples/misc/arch-moab.py
/petsc/config/examples/misc/arch-ms-msvc2012-intelmpi-cudano-nomumps-cpardiso-indexes64-mklilp64-debug.py
/petsc/config/examples/misc/arch-mswin-borland.py
/petsc/config/examples/misc/arch-mswin-cuda.py
/petsc/config/examples/misc/arch-mswin-cxx-cmplx.py
/petsc/config/examples/misc/arch-mswin-dbg-impi.py
/petsc/config/examples/misc/arch-mswin.py
/petsc/config/examples/misc/arch-osx-10.6-cxx-env.py
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/petsc/config/report_tests.py
/petsc/gmakefile
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/petsc/include/petsc/mpiuni/mpi.h
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/petsc/include/petscksp.h
/petsc/include/petsclog.h
/petsc/include/petscmat.h
/petsc/include/petscmath.h
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/petsc/makefile
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/petsc/share/petsc/datafiles/matrices/LFAT5.mtx
/petsc/share/petsc/datafiles/matrices/m_05_05_crk.mtx
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/petsc/src/dm/dt/examples/tests/ex5.c
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/petsc/src/tao/leastsquares/examples/tutorials/tomography.c
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tsadapt.c
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/petsc/src/ts/examples/tutorials/autodiff/ex16opt_ic.cxx
/petsc/src/ts/examples/tutorials/eimex/ct_vdp_imex.c
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/petsc/src/ts/examples/tutorials/ex19.c
/petsc/src/ts/examples/tutorials/ex20opt_ic.c
/petsc/src/ts/examples/tutorials/ex20opt_p.c
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/petsc/src/ts/examples/tutorials/ex35.cxx
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/petsc/src/ts/examples/tutorials/network/wash/pipes1.c
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/petsc/src/ts/examples/tutorials/output/ex16opt_p_1.out
/petsc/src/ts/examples/tutorials/output/ex18_p1p1_xper_ref.out
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/petsc/src/ts/examples/tutorials/output/ex40.out
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/petsc/src/ts/examples/tutorials/output/ex41_c.out
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/petsc/src/ts/examples/tutorials/output/ex47_2d_p1p1_mg_r1.out
/petsc/src/ts/examples/tutorials/power_grid/stability_9bus/ex9bus.c
/petsc/src/ts/examples/tutorials/power_grid/stability_9bus/ex9busadj.c
/petsc/src/ts/examples/tutorials/power_grid/stability_9bus/ex9busdmnetwork.c
/petsc/src/ts/examples/tutorials/power_grid/stability_9bus/ex9busopt.c
/petsc/src/ts/examples/tutorials/power_grid/stability_9bus/ex9busoptfd.c
/petsc/src/ts/impls/explicit/rk/makefile
/petsc/src/ts/impls/explicit/rk/mrk.c
/petsc/src/ts/impls/explicit/rk/mrk.h
/petsc/src/ts/impls/explicit/rk/rk.c
/petsc/src/ts/impls/explicit/rk/rk.h
/petsc/src/ts/impls/makefile
/petsc/src/ts/impls/multirate/makefile
/petsc/src/ts/impls/multirate/mprk.c
/petsc/src/ts/interface/sensitivity/tssen.c
/petsc/src/ts/interface/ts.c
/petsc/src/ts/interface/tshistory.c
/petsc/src/ts/interface/tsregall.c
/petsc/src/ts/interface/tsrhssplit.c
/petsc/src/ts/trajectory/interface/traj.c
/petsc/src/ts/utils/dmplexts.c
/petsc/src/vec/f90-mod/petscis.h90
/petsc/src/vec/f90-mod/petscvec.h90
/petsc/src/vec/is/examples/tests/ex2.c
/petsc/src/vec/is/is/impls/general/general.c
/petsc/src/vec/is/is/interface/index.c
/petsc/src/vec/is/is/utils/isdiff.c
/petsc/src/vec/is/sf/examples/tutorials/ex1.c
/petsc/src/vec/is/sf/examples/tutorials/output/ex1_9_char.out
/petsc/src/vec/is/sf/examples/tutorials/output/ex1_bcastop_basic.out
/petsc/src/vec/is/sf/impls/basic/sfbasic.c
/petsc/src/vec/is/sf/impls/window/sfwindow.c
/petsc/src/vec/is/sf/interface/dlregissf.c
/petsc/src/vec/is/sf/interface/sf.c
/petsc/src/vec/is/sf/interface/sftype.c
/petsc/src/vec/is/utils/f90-custom/zisltogf90.c
/petsc/src/vec/is/utils/ftn-custom/zvsectionisf.c
/petsc/src/vec/is/utils/pmap.c
/petsc/src/vec/is/utils/vsectionis.c
/petsc/src/vec/pf/impls/string/cstringbase.template
/petsc/src/vec/vec/examples/tests/ex10.c
/petsc/src/vec/vec/examples/tests/ex11.c
/petsc/src/vec/vec/examples/tests/ex12.c
/petsc/src/vec/vec/examples/tests/ex13.c
/petsc/src/vec/vec/examples/tests/ex14.c
/petsc/src/vec/vec/examples/tests/ex17.c
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/petsc/src/vec/vec/examples/tests/ex2.c
/petsc/src/vec/vec/examples/tests/ex22.c
/petsc/src/vec/vec/examples/tests/ex23.c
/petsc/src/vec/vec/examples/tests/ex24.c
/petsc/src/vec/vec/examples/tests/ex25.c
/petsc/src/vec/vec/examples/tests/ex29.c
/petsc/src/vec/vec/examples/tests/ex30f.F
/petsc/src/vec/vec/examples/tests/ex34.c
/petsc/src/vec/vec/examples/tests/ex4.c
/petsc/src/vec/vec/examples/tests/ex42.c
/petsc/src/vec/vec/examples/tests/ex44.c
/petsc/src/vec/vec/examples/tests/ex48.c
/petsc/src/vec/vec/examples/tests/ex5.c
/petsc/src/vec/vec/examples/tests/ex6.c
/petsc/src/vec/vec/examples/tests/ex7.c
/petsc/src/vec/vec/examples/tests/ex8.c
/petsc/src/vec/vec/examples/tests/ex9.c
/petsc/src/vec/vec/examples/tests/output/ex29_test_inv_error.out
/petsc/src/vec/vec/examples/tests/output/ex48_1.out
/petsc/src/vec/vec/examples/tutorials/ex11.c
/petsc/src/vec/vec/examples/tutorials/ex11f90.F90
/petsc/src/vec/vec/examples/tutorials/ex12f.F90
/petsc/src/vec/vec/examples/tutorials/ex15.c
/petsc/src/vec/vec/examples/tutorials/ex16f.F90
/petsc/src/vec/vec/examples/tutorials/ex18f.F90
/petsc/src/vec/vec/examples/tutorials/ex19.c
/petsc/src/vec/vec/examples/tutorials/ex1f.F90
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/petsc/src/vec/vec/examples/tutorials/makefile
/petsc/src/vec/vec/examples/tutorials/output/ex11_1.out
/petsc/src/vec/vec/impls/mpi/pbvec.c
/petsc/src/vec/vec/impls/mpi/pdvec.c
/petsc/src/vec/vec/impls/nest/vecnest.c
/petsc/src/vec/vec/impls/seq/bvec2.c
/petsc/src/vec/vec/impls/seq/seqcuda/cudavecimpl.h
/petsc/src/vec/vec/impls/seq/seqcuda/veccuda.c
/petsc/src/vec/vec/impls/seq/seqcuda/veccuda2.cu
/petsc/src/vec/vec/interface/dlregisvec.c
/petsc/src/vec/vec/interface/rvector.c
/petsc/src/vec/vec/interface/vector.c
/petsc/src/vec/vec/utils/projection.c
/petsc/src/vec/vec/utils/tagger/examples/tutorials/ex1.c
/petsc/src/vec/vec/utils/tagger/impls/cdf.c
/petsc/src/vec/vec/utils/vecmpitoseq.c
/petsc/src/vec/vec/utils/vecstash.c
/petsc/src/vec/vec/utils/vinv.c
/petsc/src/vec/vscat/examples/ex1.c
/petsc/src/vec/vscat/examples/ex2.c
/petsc/src/vec/vscat/examples/ex3.c
/petsc/src/vec/vscat/examples/ex4.c
/petsc/src/vec/vscat/examples/ex5.c
/petsc/src/vec/vscat/examples/ex6.c
/petsc/src/vec/vscat/examples/ex7.c
/petsc/src/vec/vscat/examples/makefile
/petsc/src/vec/vscat/examples/output/ex6_1.out
/petsc/src/vec/vscat/examples/output/ex7_1.out
/petsc/src/vec/vscat/impls/makefile
/petsc/src/vec/vscat/impls/mpi1/vpscat_mpi1.c
/petsc/src/vec/vscat/impls/mpi1/vpscat_mpi1.h
/petsc/src/vec/vscat/impls/mpi3/vpscat.c
/petsc/src/vec/vscat/impls/mpi3/vpscat.h
/petsc/src/vec/vscat/impls/sf/makefile
/petsc/src/vec/vscat/impls/sf/vscatsf.c
/petsc/src/vec/vscat/impls/vscat.c
/petsc/src/vec/vscat/interface/dlregisvecscat.c
/petsc/src/vec/vscat/interface/vscatfce.c
/petsc/src/vec/vscat/interface/vscreate.c
8a69049121-Dec-2018 Barry Smith <bsmith@mcs.anl.gov>

Fixes for begining of users manual and a variety of webpages including manual pages

Commit-type: bug-fix, documentation


/petsc/config/BuildSystem/config/compilers.py
/petsc/config/BuildSystem/config/libraries.py
/petsc/config/BuildSystem/config/package.py
/petsc/config/BuildSystem/config/packages/ADOLC.py
/petsc/config/BuildSystem/config/packages/ColPack.py
/petsc/config/BuildSystem/config/packages/SuperLU_DIST.py
/petsc/config/BuildSystem/config/packages/Triangle.py
/petsc/config/BuildSystem/config/packages/Trilinos.py
/petsc/config/BuildSystem/config/packages/hdf5.py
/petsc/config/BuildSystem/help.py
/petsc/config/examples/arch-bgp-ibm-opt.py
/petsc/config/examples/arch-cray-xt6-pkgs-opt.py
/petsc/config/examples/arch-linux-analyzer.py
/petsc/config/examples/arch-linux-gcc-cxx-avx2.py
/petsc/config/examples/arch-linux-knl.py
/petsc/config/examples/arch-linux-pkgs-64idx.py
/petsc/config/examples/arch-linux-pkgs-cxx-mlib.py
/petsc/config/examples/arch-opensolaris-pkgs-opt.py
/petsc/config/examples/arch-osx-10.6-cxx-pkgs-opt.py
/petsc/config/gmakegen.py
/petsc/config/gmakegentest.py
/petsc/config/testparse.py
/petsc/gmakefile
/petsc/gmakefile.test
/petsc/include/makefile
/petsc/include/petsc/private/pcpatchimpl.h
/petsc/include/petsc/private/snesimpl.h
/petsc/include/petsc/private/tshistoryimpl.h
/petsc/include/petsc/private/tsimpl.h
/petsc/include/petscerror.h
/petsc/include/petscmath.h
/petsc/include/petscoptions.h
/petsc/include/petscsys.h
/petsc/include/petscsystypes.h
/petsc/include/petscversion.h
/petsc/include/petscviewerhdf5.h
/petsc/lib/petsc/bin/maint/lex.py
/petsc/lib/petsc/conf/bfort-petsc.txt
/petsc/lib/petsc/conf/rules
/petsc/makefile
/petsc/share/petsc/datafiles/matrices/tiny_system_with_x0.mat
/petsc/share/petsc/datafiles/matrices/tiny_system_with_x0_complex.mat
/petsc/src/dm/examples/tests/ex24.c
/petsc/src/dm/examples/tests/ex25.c
/petsc/src/dm/impls/da/gr2.c
/petsc/src/dm/impls/plex/generators/triangle/trigenerate.c
/petsc/src/dm/interface/dlregisdmdm.c
/petsc/src/dm/interface/dm.c
/petsc/src/docs/tex/manual/abstract.tex
/petsc/src/docs/tex/manual/acknowl.tex
/petsc/src/docs/tex/manual/makefile
/petsc/src/docs/tex/manual/manual.tex
/petsc/src/docs/tex/manual/part1.tex
/petsc/src/docs/tex/manual/part2.tex
/petsc/src/docs/website/documentation/installation.html
/petsc/src/docs/website/download/index.html
/petsc/src/docs/website/features/gpus.html
/petsc/src/docs/website/index.html
/petsc/src/docs/website/miscellaneous/external.html
/petsc/src/docs/website/publications/index.html
/petsc/src/ksp/ksp/examples/tests/ex49.c
/petsc/src/ksp/ksp/examples/tutorials/ex1.c
/petsc/src/ksp/ksp/examples/tutorials/ex2.c
/petsc/src/ksp/ksp/examples/tutorials/ex27.c
/petsc/src/ksp/ksp/examples/tutorials/ex54f.F90
/petsc/src/ksp/ksp/examples/tutorials/ex6.c
/petsc/src/ksp/ksp/examples/tutorials/ex8.c
/petsc/src/ksp/ksp/examples/tutorials/output/ex27_3b_hdf5_nsize-1.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex27_3b_hdf5_nsize-2.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex27_4a_lsqr_hdf5.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex27_4b_ksp_lsqr_exact_mat_norm-0.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex27_4b_ksp_lsqr_exact_mat_norm-1.out
/petsc/src/ksp/ksp/impls/gmres/agmres/agmresorthog.c
/petsc/src/ksp/ksp/impls/gmres/dgmres/dgmres.c
/petsc/src/ksp/ksp/impls/gmres/fgmres/fgmres.c
/petsc/src/ksp/ksp/impls/gmres/gmres.c
/petsc/src/ksp/ksp/impls/gmres/lgmres/lgmres.c
/petsc/src/ksp/ksp/impls/gmres/pgmres/pgmres.c
/petsc/src/ksp/ksp/impls/rich/rich.c
/petsc/src/ksp/ksp/interface/dlregisksp.c
/petsc/src/ksp/ksp/interface/itcreate.c
/petsc/src/ksp/pc/examples/tests/ex1.c
/petsc/src/ksp/pc/examples/tutorials/ex2.c
/petsc/src/ksp/pc/impls/bddc/bddc.c
/petsc/src/ksp/pc/impls/fieldsplit/fieldsplit.c
/petsc/src/ksp/pc/impls/gamg/gamg.c
/petsc/src/ksp/pc/impls/patch/pcpatch.c
/petsc/src/ksp/pc/impls/pbjacobi/pbjacobi.c
/petsc/src/mat/examples/tests/ex103.c
/petsc/src/mat/examples/tests/ex18.c
/petsc/src/mat/examples/tests/ex50.c
/petsc/src/mat/examples/tests/ex88.c
/petsc/src/mat/examples/tests/output/ex103_1.out
/petsc/src/mat/examples/tests/output/ex88_1.out
/petsc/src/mat/examples/tutorials/ex10.c
/petsc/src/mat/examples/tutorials/ex12.c
/petsc/src/mat/examples/tutorials/ex2.c
/petsc/src/mat/examples/tutorials/output/ex10_mpiaij.out
/petsc/src/mat/examples/tutorials/output/ex10_mpiaij_hdf5.out
/petsc/src/mat/examples/tutorials/output/ex10_mpiaij_hdf5_tiny.out
/petsc/src/mat/examples/tutorials/output/ex10_mpibaij_hdf5.out
/petsc/src/mat/examples/tutorials/output/ex10_mpidense.out
/petsc/src/mat/examples/tutorials/output/ex10_seqaij.out
/petsc/src/mat/examples/tutorials/output/ex10_seqaij_hdf5.out
/petsc/src/mat/examples/tutorials/output/ex10_seqdense.out
/petsc/src/mat/impls/aij/mpi/mkl_cpardiso/mkl_cpardiso.c
/petsc/src/mat/impls/aij/mpi/mpiaij.c
/petsc/src/mat/impls/aij/mpi/mpiaij.h
/petsc/src/mat/impls/aij/seq/aij.c
/petsc/src/mat/impls/aij/seq/aij.h
/petsc/src/mat/impls/aij/seq/aijhdf5.c
/petsc/src/mat/impls/aij/seq/makefile
/petsc/src/mat/impls/baij/mpi/mpibaij.c
/petsc/src/mat/impls/baij/seq/baij.c
/petsc/src/mat/impls/dense/mpi/mpidense.c
/petsc/src/mat/impls/dense/seq/dense.c
/petsc/src/mat/impls/mffd/mffd.c
/petsc/src/mat/impls/sbaij/mpi/mpisbaij.c
/petsc/src/mat/impls/sbaij/seq/sbaij.c
/petsc/src/mat/impls/shell/shell.c
/petsc/src/mat/interface/dlregismat.c
/petsc/src/mat/interface/matrix.c
/petsc/src/snes/examples/tests/ex18f90.F90
/petsc/src/snes/examples/tutorials/ex21.c
/petsc/src/snes/examples/tutorials/ex46.c
/petsc/src/snes/examples/tutorials/ex77.c
/petsc/src/snes/examples/tutorials/output/ex62_pc_simplec.out
/petsc/src/snes/impls/ksponly/ksponly.c
/petsc/src/snes/impls/ls/ls.c
/petsc/src/snes/impls/ms/ms.c
/petsc/src/snes/impls/qn/qn.c
/petsc/src/snes/interface/dlregissnes.c
/petsc/src/snes/interface/snesj2.c
/petsc/src/sys/classes/draw/interface/draw.c
/petsc/src/sys/classes/random/interface/dlregisrand.c
/petsc/src/sys/classes/viewer/impls/hdf5/ftn-custom/zhdf5f.c
/petsc/src/sys/classes/viewer/impls/hdf5/hdf5v.c
/petsc/src/sys/classes/viewer/impls/mathematica/mathematica.c
/petsc/src/sys/classes/viewer/interface/dlregispetsc.c
/petsc/src/sys/examples/tests/ex23.c
/petsc/src/sys/examples/tests/ex23options
/petsc/src/sys/examples/tests/output/ex23_1.out
/petsc/src/sys/f90-mod/petscsys.h
/petsc/src/sys/objects/init.c
/petsc/src/sys/objects/pinit.c
/petsc/src/sys/objects/ptype.c
/petsc/src/tao/interface/dlregistao.c
/petsc/src/tao/leastsquares/examples/tutorials/chwirut2.c
/petsc/src/tao/linesearch/interface/dlregis_taolinesearch.c
tsadapt.c
/petsc/src/ts/examples/tests/ex12.c
/petsc/src/ts/examples/tutorials/advection-diffusion-reaction/ex3.c
/petsc/src/ts/examples/tutorials/advection-diffusion-reaction/ex5.c
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/petsc/src/ts/examples/tutorials/autodiff/adolc-utils/sparse.cxx
/petsc/src/ts/examples/tutorials/autodiff/adr_ex1.cxx
/petsc/src/ts/examples/tutorials/autodiff/adr_ex5adj.cxx
/petsc/src/ts/examples/tutorials/autodiff/adr_ex5adj_mf.cxx
/petsc/src/ts/examples/tutorials/autodiff/ex16adj.cxx
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/petsc/src/ts/examples/tutorials/autodiff/ex16opt_ic.cxx
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/petsc/src/ts/examples/tutorials/extchem.example.1
/petsc/src/ts/examples/tutorials/extchemfield.c
/petsc/src/ts/examples/tutorials/gasoline.inp
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/petsc/src/ts/examples/tutorials/phasefield/biharmonic.c
/petsc/src/ts/examples/tutorials/phasefield/biharmonictest.m
/petsc/src/ts/examples/tutorials/phasefield/heat.c
/petsc/src/ts/examples/tutorials/phasefield/heattest.m
/petsc/src/ts/examples/tutorials/power_grid/petscopt_ex7
/petsc/src/ts/examples/tutorials/power_grid/petscopt_ex8
/petsc/src/ts/impls/arkimex/arkimex.c
/petsc/src/ts/impls/explicit/rk/rk.c
/petsc/src/ts/impls/explicit/ssp/ssp.c
/petsc/src/ts/impls/glee/glee.c
/petsc/src/ts/impls/implicit/glle/glle.c
/petsc/src/ts/impls/implicit/glle/glleadapt.c
/petsc/src/ts/impls/rosw/rosw.c
/petsc/src/ts/impls/symplectic/basicsymplectic/basicsymplectic.c
/petsc/src/ts/interface/dlregists.c
/petsc/src/ts/interface/ts.c
/petsc/src/vec/is/ao/examples/tests/ex5.c
/petsc/src/vec/is/ao/examples/tests/makefile
/petsc/src/vec/is/ao/examples/tests/output/ex5_1.out
/petsc/src/vec/is/ao/impls/memscalable/aomemscalable.c
/petsc/src/vec/is/ao/interface/dlregisdm.c
/petsc/src/vec/is/is/impls/general/general.c
/petsc/src/vec/is/utils/pmap.c
/petsc/src/vec/pf/interface/pf.c
/petsc/src/vec/vec/examples/tests/ex10.c
/petsc/src/vec/vec/examples/tests/ex14.c
/petsc/src/vec/vec/examples/tests/ex22.c
/petsc/src/vec/vec/examples/tests/ex23.c
/petsc/src/vec/vec/examples/tests/ex24.c
/petsc/src/vec/vec/examples/tests/ex33.c
/petsc/src/vec/vec/examples/tests/ex6.c
/petsc/src/vec/vec/examples/tests/ex7.c
/petsc/src/vec/vec/examples/tests/ex8.c
/petsc/src/vec/vec/impls/mpi/pdvec.c
/petsc/src/vec/vec/interface/dlregisvec.c
/petsc/src/vec/vscat/interface/dlregisvecscat.c
de50f1ca05-Dec-2018 Barry Smith <bsmith@mcs.anl.gov>

Allow user to control the number of timesteps before an increase in timestep is allowed after failed solve

The default use to be hardwired at 4, now the default is 0 but under user control

Commit-t

Allow user to control the number of timesteps before an increase in timestep is allowed after failed solve

The default use to be hardwired at 4, now the default is 0 but under user control

Commit-type: feature
Reported-by: Sophie Blondel <sblondel@utk.edu>

show more ...


/petsc/config/BuildSystem/config/compilerOptions.py
/petsc/config/BuildSystem/config/package.py
/petsc/config/BuildSystem/config/packages/GLVis.py
/petsc/config/BuildSystem/config/packages/MFEM.py
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/petsc/src/vec/is/utils/pmap.c
/petsc/src/vec/is/utils/vsectionis.c
/petsc/src/vec/vec/examples/tests/ex44.c
/petsc/src/vec/vec/examples/tests/ex5.c
/petsc/src/vec/vec/examples/tutorials/ex18.c
/petsc/src/vec/vec/examples/tutorials/ex19.c
/petsc/src/vec/vec/examples/tutorials/output/ex18_1.out
/petsc/src/vec/vec/examples/tutorials/output/ex18_2.out
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/petsc/src/vec/vec/utils/projection.c
/petsc/src/vec/vec/utils/vinv.c
d949e4a428-Nov-2018 Stefano Zampini <stefano.zampini@gmail.com>

TS: added TSADAPTHISTORY adaptor


/petsc/include/petsc/finclude/petscts.h
/petsc/include/petsc/private/makefile
/petsc/include/petsc/private/tshistoryimpl.h
/petsc/include/petsc/private/tsimpl.h
/petsc/include/petscts.h
/petsc/src/docs/website/documentation/changes/dev.html
/petsc/src/ts/adapt/impls/history/adapthist.c
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tsadapt.c
/petsc/src/ts/impls/explicit/rk/rk.c
/petsc/src/ts/impls/glee/glee.c
/petsc/src/ts/interface/dlregists.c
/petsc/src/ts/interface/makefile
/petsc/src/ts/interface/ts.c
/petsc/src/ts/interface/tshistory.c
fe7350e028-Nov-2018 Stefano Zampini <stefano.zampini@gmail.com>

TSAdapt: make matchstep factors customizable


/petsc/CODE_OF_CONDUCT.md
/petsc/config/BuildSystem/RDict.py
/petsc/config/BuildSystem/config/base.py
/petsc/config/BuildSystem/config/compilers.py
/petsc/config/BuildSystem/config/framework.py
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/petsc/config/BuildSystem/config/packages/BlasLapack.py
/petsc/config/BuildSystem/config/packages/Chaco.py
/petsc/config/BuildSystem/config/packages/Chombo.py
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/petsc/src/tao/quadratic/impls/bqpip/bqpip.c
/petsc/src/tao/quadratic/impls/gpcg/gpcg.c
/petsc/src/tao/unconstrained/impls/bmrm/bmrm.c
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tsadapt.c
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/petsc/src/ts/examples/tests/makefile
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/petsc/src/vec/vec/examples/tests/ex30f.F
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/petsc/src/vec/vec/examples/tutorials/ex1.c
/petsc/src/vec/vec/impls/mpi/mpicuda/makefile
/petsc/src/vec/vec/impls/mpi/pbvec.c
/petsc/src/vec/vec/impls/seq/ftn-custom/makefile
/petsc/src/vec/vec/impls/seq/seqcuda/makefile
/petsc/src/vec/vec/impls/seq/seqcuda/veccuda.c
/petsc/src/vec/vec/impls/seq/seqcuda/veccuda2.cu
/petsc/src/vec/vec/impls/seq/seqviennacl/vecviennacl.cxx
/petsc/src/vec/vec/interface/dlregisvec.c
/petsc/src/vec/vec/interface/ftn-custom/zvectorf.c
/petsc/src/vec/vec/interface/rvector.c
/petsc/src/vec/vec/interface/vecregall.c
/petsc/src/vec/vec/interface/vector.c
/petsc/src/vec/vec/utils/tagger/examples/tutorials/ex1.c
/petsc/src/vec/vec/utils/tagger/impls/cdf.c
/petsc/src/vec/vec/utils/vecglvis.c
/petsc/src/vec/vec/utils/vecio.c
/petsc/src/vec/vec/utils/vecmpitoseq.c
/petsc/src/vec/vec/utils/vinv.c
/petsc/src/vec/vscat/examples/ex1.c
/petsc/src/vec/vscat/examples/ex2.c
/petsc/src/vec/vscat/examples/ex3.c
/petsc/src/vec/vscat/examples/ex4.c
/petsc/src/vec/vscat/examples/ex5.c
/petsc/src/vec/vscat/examples/makefile
/petsc/src/vec/vscat/impls/makefile
/petsc/src/vec/vscat/impls/mpi1/makefile
/petsc/src/vec/vscat/impls/mpi1/vpscat_mpi1.c
/petsc/src/vec/vscat/impls/mpi1/vpscat_mpi1.h
/petsc/src/vec/vscat/impls/mpi3/makefile
/petsc/src/vec/vscat/impls/mpi3/vpscat.c
/petsc/src/vec/vscat/impls/mpi3/vpscat.h
/petsc/src/vec/vscat/impls/seq/makefile
/petsc/src/vec/vscat/impls/seq/seqvscat.c
/petsc/src/vec/vscat/impls/vscat.c
/petsc/src/vec/vscat/interface/dlregisvecscat.c
/petsc/src/vec/vscat/interface/vscatfce.c
/petsc/src/vec/vscat/interface/vscreate.c
d49bb8f905-Nov-2018 Barry Smith <bsmith@mcs.anl.gov>

Add if (*ierr) return checks for all Fortran stubs that utilize FREECHAR()

Otherwise the ierr is overwritten by the FREECHAR() thus returning a zero error code when it should not

Commit-type: bug-f

Add if (*ierr) return checks for all Fortran stubs that utilize FREECHAR()

Otherwise the ierr is overwritten by the FREECHAR() thus returning a zero error code when it should not

Commit-type: bug-fix
Reported-by: Tim Steinhoff <kandanovian@gmail.com>

show more ...


/petsc/config/BuildSystem/config/package.py
/petsc/config/BuildSystem/config/packages/PTScotch.py
/petsc/config/BuildSystem/config/packages/Zoltan.py
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/petsc/src/tao/unconstrained/examples/tutorials/output/minsurf2_2.out
/petsc/src/tao/unconstrained/examples/tutorials/rosenbrock1.c
/petsc/src/tao/unconstrained/impls/nls/nls.c
/petsc/src/tao/unconstrained/impls/ntl/ntl.c
/petsc/src/tao/unconstrained/impls/ntr/ntr.c
/petsc/src/ts/adapt/impls/dsp/ftn-custom/zadaptdspf.c
ftn-custom/ztsadaptf.c
/petsc/src/ts/examples/tutorials/ex11.c
/petsc/src/ts/impls/arkimex/ftn-custom/zarkimexf.c
/petsc/src/ts/impls/explicit/rk/ftn-custom/zrkf.c
/petsc/src/ts/impls/explicit/ssp/ftn-custom/zsspf.c
/petsc/src/ts/impls/python/ftn-custom/zpythontf.c
/petsc/src/ts/impls/rosw/ftn-custom/zroswf.c
/petsc/src/ts/interface/ftn-custom/ztsf.c
/petsc/src/ts/interface/ftn-custom/ztsregf.c
/petsc/src/ts/trajectory/interface/ftn-custom/ztrajf.c
/petsc/src/vec/f90-mod/petscvec.h90
/petsc/src/vec/is/ao/interface/ftn-custom/zaof.c
/petsc/src/vec/is/sf/impls/basic/sfbasic.c
/petsc/src/vec/vec/impls/mpi/mpicuda/mpicuda.cu
/petsc/src/vec/vec/impls/mpi/pdvec.c
/petsc/src/vec/vec/impls/seq/ftn-custom/zvsectionf.c
/petsc/src/vec/vec/interface/ftn-custom/zvecregf.c
/petsc/src/vec/vec/interface/ftn-custom/zvectorf.c
/petsc/src/vec/vec/interface/rvector.c
/petsc/src/vec/vscat/interface/ftn-custom/zvscatfcef.c
/petsc/src/vec/vscat/interface/vscatfce.c
1d36bdfd16-Sep-2018 Barry Smith <bsmith@mcs.anl.gov>

Remove memory leaks of XXXRegister() is called but XXX object is never used

This means adding YYYInitialPackage() at the beginning of XXXRegister() routines

Minor fixes of missing prototypes

Commi

Remove memory leaks of XXXRegister() is called but XXX object is never used

This means adding YYYInitialPackage() at the beginning of XXXRegister() routines

Minor fixes of missing prototypes

Commit-type: style-fix
Reported-by: Jed Brown <jed@jedbrown.org>
Thanks-to: Fande Kong <fande.kong@inl.gov>

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/petsc/src/vec/vscat/impls/vpscat_mpi1.c
/petsc/src/vec/vscat/impls/vpscat_mpi1.h
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/petsc/src/vec/vscat/interface/vscatfce.c
/petsc/src/vec/vscat/interface/vscreate.c
/petsc/src/vec/vscat/makefile
/petsc/systems/Apple/OSX/bin/makedmg
/petsc/systems/Apple/OSX/examples/PETSc cocoa example/PETSc cocoa example.xcodeproj/project.pbxproj
/petsc/systems/Apple/OSX/examples/PETSc cocoa example/PETSc cocoa example/PETSc cocoa example-Info.plist
/petsc/systems/Apple/iOS/PETSc/PETSc.xcodeproj/project.pbxproj
/petsc/systems/Apple/iOS/bin/iosbuilder.py
/petsc/systems/Apple/iOS/bin/makedmg
ec18b7bc10-Jan-2018 Lisandro Dalcin <dalcinl@gmail.com>

docs: Fix TSAdapt manpages


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/petsc/src/ts/adapt/impls/basic/adaptbasic.c
/petsc/src/ts/adapt/impls/cfl/adaptcfl.c
/petsc/src/ts/adapt/impls/glee/adaptglee.c
tsadapt.c
/petsc/src/ts/examples/tests/ex1.c
/petsc/src/ts/examples/tutorials/ex11.c
/petsc/src/ts/examples/tutorials/ex18.c
/petsc/src/ts/examples/tutorials/ex19.c
/petsc/src/ts/examples/tutorials/ex9.c
/petsc/src/ts/examples/tutorials/output/ex19_pi42.out
/petsc/src/ts/impls/arkimex/arkimex.c
/petsc/src/ts/impls/explicit/rk/rk.c
/petsc/src/ts/impls/glee/glee.c
/petsc/src/ts/impls/implicit/glle/glle.c
/petsc/src/ts/impls/implicit/theta/theta.c
/petsc/src/ts/impls/rosw/rosw.c
/petsc/src/ts/interface/ts.c
/petsc/src/vec/is/sf/examples/tutorials/ex1.c
/petsc/src/vec/is/utils/isltog.c
/petsc/src/vec/vec/impls/mpi/pdvec.c
/petsc/src/vec/vec/impls/seq/bvec2.c
/petsc/src/vec/vec/impls/seq/seqcuda/veccuda.c
/petsc/src/vec/vec/utils/vpscat.h
/petsc/src/vec/vec/utils/vsection.c
cb7ab18605-Jun-2017 Lisandro Dalcin <dalcinl@gmail.com>

TSADAPTDSP: New adaptive controller based on digital signal processing


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36b54a6904-Aug-2017 Lisandro Dalcin <dalcinl@gmail.com>

TSAdapt: Increase/reduce step size when approaching max time


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/petsc/src/vec/vec/examples/tutorials/ex14f.F90
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/petsc/src/vec/vec/impls/mpi/pdvec.c
/petsc/src/vec/vec/impls/seq/bvec2.c
/petsc/src/vec/vec/impls/seq/seqcuda/veccuda2.cu
/petsc/src/vec/vec/impls/seq/seqcusp/veccusp2.cu
/petsc/src/vec/vec/impls/seq/seqviennacl/vecviennacl.cxx
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/petsc/src/vec/vec/utils/vecglvis.c
/petsc/src/vec/vec/utils/vecio.c
3661b46425-Jun-2017 Satish Balay <balay@mcs.anl.gov>

Merge remote-tracking branch 'origin/barry/update-petscfileretrieve'


/petsc/.gitignore
/petsc/bin/maint/toclapack.sh
/petsc/bin/petsc_gen_xdmf.py
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/petsc/src/snes/utils/dmplexsnes.c
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/petsc/src/sys/classes/viewer/impls/ascii/filev.c
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/petsc/src/sys/utils/str.c
/petsc/src/tao/bound/examples/tutorials/plate2f.F
/petsc/src/tao/bound/impls/blmvm/blmvm.c
/petsc/src/tao/complementarity/impls/asls/asils.c
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/petsc/src/tao/examples/tutorials/ex1.c
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/petsc/src/tao/linesearch/impls/gpcglinesearch/gpcglinesearch.c
/petsc/src/tao/pde_constrained/examples/tutorials/elliptic.c
/petsc/src/tao/unconstrained/examples/tutorials/eptorsion2f.F
/petsc/src/tao/unconstrained/impls/bmrm/bmrm.c
/petsc/src/ts/adapt/impls/basic/adaptbasic.c
tsadapt.c
/petsc/src/ts/examples/tests/ex3.c
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/petsc/src/ts/impls/bdf/bdf.c
/petsc/src/ts/impls/eimex/eimex.c
/petsc/src/ts/impls/explicit/euler/euler.c
/petsc/src/ts/impls/explicit/rk/rk.c
/petsc/src/ts/impls/glee/glee.c
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/petsc/src/ts/impls/implicit/alpha/alpha2.c
/petsc/src/ts/impls/implicit/glle/glle.c
/petsc/src/ts/impls/implicit/sundials/sundials.c
/petsc/src/ts/impls/implicit/theta/theta.c
/petsc/src/ts/impls/mimex/mimex.c
/petsc/src/ts/impls/pseudo/posindep.c
/petsc/src/ts/impls/rosw/rosw.c
/petsc/src/ts/interface/ts.c
/petsc/src/ts/interface/tscreate.c
/petsc/src/ts/trajectory/impls/memory/trajmemory.c
/petsc/src/vec/is/ao/interface/ao.c
/petsc/src/vec/is/is/impls/block/block.c
/petsc/src/vec/is/is/impls/general/general.c
/petsc/src/vec/is/is/impls/stride/stride.c
/petsc/src/vec/is/is/interface/index.c
/petsc/src/vec/vec/examples/tests/ex43.c
b92453a803-May-2017 Lisandro Dalcin <dalcinl@gmail.com>

TSAdapt: Set TSADAPTNONE as default adapt type

* TSCreate() set TSADAPTNONE as default adapt type
* TSSetType() set TSADAPTNONE before running the constructor
* Add missing error checking in TSXXXSe

TSAdapt: Set TSADAPTNONE as default adapt type

* TSCreate() set TSADAPTNONE as default adapt type
* TSSetType() set TSADAPTNONE before running the constructor
* Add missing error checking in TSXXXSetType()

show more ...


/petsc/src/docs/website/documentation/changes/dev.html
tsadapt.c
/petsc/src/ts/impls/arkimex/arkimex.c
/petsc/src/ts/impls/explicit/rk/rk.c
/petsc/src/ts/impls/explicit/ssp/ssp.c
/petsc/src/ts/impls/glee/glee.c
/petsc/src/ts/impls/rosw/rosw.c
/petsc/src/ts/interface/ts.c
/petsc/src/ts/interface/tscreate.c
/petsc/src/ts/interface/tsreg.c
2ffb926401-May-2017 Lisandro Dalcin <dalcinl@gmail.com>

TSAdapt: Refactor handling of default adapt type

* Let TS subtypes state its preference for adaptivity
* Methods without embedded error estimators prefer TSADAPTNONE
* If not set, use TS_EXACTFINALT

TSAdapt: Refactor handling of default adapt type

* Let TS subtypes state its preference for adaptivity
* Methods without embedded error estimators prefer TSADAPTNONE
* If not set, use TS_EXACTFINALTIME_MATCHSTEP when using adaptivity

* Remove command line option -ts_theta_adapt
* Use `-ts_adapt_type basic` to turn on adaptivity in TSTHETA

* Remove command line option -ts_alpha_adapt
* Remove routine TSAlphaUseAdapt() and TSAlpha2UseAdapt()
* Use `-ts_adapt_type basic` to turn on adaptivity in TSALPHA/TSALPHA2

show more ...


/petsc/include/petsc/private/tsimpl.h
/petsc/include/petscts.h
/petsc/src/docs/tex/manual/part2.tex
/petsc/src/docs/website/documentation/changes/dev.html
tsadapt.c
/petsc/src/ts/examples/tutorials/makefile
/petsc/src/ts/impls/arkimex/arkimex.c
/petsc/src/ts/impls/bdf/bdf.c
/petsc/src/ts/impls/eimex/eimex.c
/petsc/src/ts/impls/explicit/euler/euler.c
/petsc/src/ts/impls/explicit/rk/rk.c
/petsc/src/ts/impls/explicit/ssp/ssp.c
/petsc/src/ts/impls/implicit/alpha/alpha1.c
/petsc/src/ts/impls/implicit/alpha/alpha2.c
/petsc/src/ts/impls/implicit/sundials/sundials.c
/petsc/src/ts/impls/implicit/theta/theta.c
/petsc/src/ts/impls/mimex/mimex.c
/petsc/src/ts/impls/pseudo/posindep.c
/petsc/src/ts/impls/rosw/rosw.c
/petsc/src/ts/interface/ts.c
/petsc/src/ts/interface/tscreate.c
/petsc/src/ts/interface/tsreg.c
1917a36324-Apr-2017 Lisandro Dalcin <dalcinl@gmail.com>

TSAdapt: Refactor interface and implementations

* Move the handling of step limits, clipping factors, and safety factors
to the base TSAdapt type to simplify implementation of subtypes.
* Add TSAd

TSAdapt: Refactor interface and implementations

* Move the handling of step limits, clipping factors, and safety factors
to the base TSAdapt type to simplify implementation of subtypes.
* Add TSAdapt{Set|Get}Clip() and remove TSAdaptBasic{Set|Get}Clip().
* Add TSAdapt{Set|Get}Safety() to set safety factors.
* Add TSAdaptGetStepLimits().

show more ...


/petsc/config/builder.py
/petsc/include/petsc/private/tsimpl.h
/petsc/include/petscts.h
/petsc/src/ts/adapt/impls/basic/adaptbasic.c
/petsc/src/ts/adapt/impls/cfl/adaptcfl.c
/petsc/src/ts/adapt/impls/glee/adaptglee.c
tsadapt.c
/petsc/src/ts/examples/tutorials/makefile
/petsc/src/ts/examples/tutorials/output/ex3_3.out
/petsc/src/ts/examples/tutorials/output/ex3_4.out
/petsc/src/ts/examples/tutorials/output/ex3_5.out
/petsc/src/ts/examples/tutorials/output/ex43_a.out
/petsc/src/ts/impls/bdf/bdf.c
/petsc/src/ts/impls/explicit/rk/rk.c
/petsc/src/ts/impls/glee/glee.c
/petsc/src/ts/impls/rosw/rosw.c

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