History log of /petsc/src/ts/impls/ (Results 601 – 625 of 1345)
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abadfa0f26-Feb-2015 Matthew G. Knepley <knepley@gmail.com>

TS: Added Matt's braindead IMEX method for debugging
- I can't get any of the PETSc IMEX to work at all
- Its named MIMEX
- It just solves the implicit part, and then takes an explicit step


/petsc/bin/maint/builddist
/petsc/bin/maint/confignightly/crank3
/petsc/bin/maint/xclude
/petsc/config/BuildSystem/config/package.py
/petsc/config/BuildSystem/config/packages/elemental.py
/petsc/config/BuildSystem/config/packages/viennacl.py
/petsc/config/builder.py
/petsc/config/builder2.py
/petsc/config/examples/arch-freebsd-cxx-pkgs-opt.py
/petsc/config/examples/arch-linux-pkgs-cxx-mlib.py
/petsc/config/examples/arch-linux-pkgs-opt.py
/petsc/config/examples/arch-osx-10.6-cxx-pkgs-opt.py
/petsc/include/petscdmplex.h
/petsc/include/petscdmtypes.h
/petsc/include/petscts.h
/petsc/include/petscviewer.h
/petsc/src/dm/examples/tutorials/ex15.c
/petsc/src/dm/examples/tutorials/makefile
/petsc/src/dm/impls/composite/pack.c
/petsc/src/dm/impls/da/fdda.c
/petsc/src/dm/impls/da/gr2.c
/petsc/src/dm/impls/plex/plex.c
/petsc/src/dm/impls/plex/plexfem.c
/petsc/src/dm/impls/plex/plexgeometry.c
/petsc/src/dm/impls/plex/plexsubmesh.c
/petsc/src/docs/tex/petsc.bib
/petsc/src/docs/tex/petscapp.bib
/petsc/src/ksp/ksp/examples/tutorials/ex59.c
/petsc/src/mat/impls/aij/mpi/mpiaij.c
/petsc/src/mat/impls/baij/mpi/mpibaij.c
/petsc/src/mat/impls/dense/mpi/mpidense.c
/petsc/src/mat/impls/sbaij/mpi/mpisbaij.c
/petsc/src/snes/impls/qn/qn.c
/petsc/src/snes/utils/dmplexsnes.c
/petsc/src/sys/classes/draw/impls/x/xops.c
/petsc/src/sys/classes/draw/interface/drawreg.c
/petsc/src/sys/classes/draw/utils/lgc.c
/petsc/src/sys/classes/viewer/impls/binary/binv.c
/petsc/src/sys/objects/ftn-custom/zstart.c
/petsc/src/sys/objects/inherit.c
/petsc/src/sys/objects/pinit.c
/petsc/src/ts/examples/tutorials/ex11.c
/petsc/src/ts/examples/tutorials/ex16adj.c
/petsc/src/ts/examples/tutorials/ex16opt_ic.c
/petsc/src/ts/examples/tutorials/ex16opt_p.c
/petsc/src/ts/examples/tutorials/ex18.c
/petsc/src/ts/examples/tutorials/ex20adj.c
/petsc/src/ts/examples/tutorials/ex20opt_ic.c
/petsc/src/ts/examples/tutorials/ex20opt_p.c
/petsc/src/ts/examples/tutorials/makefile
/petsc/src/ts/examples/tutorials/output/ex16opt_ic_1.out
/petsc/src/ts/examples/tutorials/output/ex16opt_p_1.out
/petsc/src/ts/examples/tutorials/output/ex18_adv_0_im.out
/petsc/src/ts/examples/tutorials/output/ex18_adv_0_im_2.out
/petsc/src/ts/examples/tutorials/output/ex18_adv_0_im_3.out
/petsc/src/ts/examples/tutorials/output/ex18_adv_0_im_4.out
/petsc/src/ts/examples/tutorials/output/ex18_adv_2.out
/petsc/src/ts/examples/tutorials/output/ex18_adv_3.out
/petsc/src/ts/examples/tutorials/output/ex18_adv_3_ex.out
/petsc/src/ts/examples/tutorials/output/ex18_adv_4.out
/petsc/src/ts/examples/tutorials/output/ex18_adv_delta_yper_0.out
/petsc/src/ts/examples/tutorials/output/ex18_adv_delta_yper_1.out
/petsc/src/ts/examples/tutorials/output/ex18_adv_delta_yper_2.out
/petsc/src/ts/examples/tutorials/output/ex20adj_1.out
/petsc/src/ts/examples/tutorials/output/ex20opt_ic_1.out
/petsc/src/ts/examples/tutorials/output/ex20opt_p_1.out
/petsc/src/ts/examples/tutorials/power_grid/ex3adj.c
/petsc/src/ts/examples/tutorials/power_grid/ex3opt.c
/petsc/src/ts/examples/tutorials/power_grid/ex3opt_fd.c
/petsc/src/ts/examples/tutorials/power_grid/output/ex3adj_1.out
/petsc/src/ts/examples/tutorials/power_grid/output/ex3opt_1.out
/petsc/src/ts/examples/tutorials/power_grid/output/ex3opt_fd_1.out
/petsc/src/ts/examples/tutorials/power_grid/stability_9bus/ex9busopt.c
makefile
mimex/makefile
mimex/mimex.c
/petsc/src/ts/interface/ts.c
/petsc/src/ts/interface/tsregall.c
/petsc/src/vec/is/utils/isltog.c
/petsc/src/vec/vec/examples/tests/ex46.c
/petsc/src/vec/vec/impls/mpi/pdvec.c
/petsc/src/vec/vec/impls/seq/bvec2.c
/petsc/src/vec/vec/interface/rvector.c
/petsc/src/vec/vec/utils/vecio.c
6991f82716-Feb-2015 Barry Smith <bsmith@mcs.anl.gov>

shift order of processing options for TS to be compatiable with SAWs
Fix options handling for SAWs to duplicate array that previously was deleted too soon for SAWs processing


/petsc/include/petsc-private/dmdaimpl.h
/petsc/include/petsc-private/kspimpl.h
/petsc/include/petsc-private/pcgamgimpl.h
/petsc/include/petscksp.h
/petsc/include/petscoptions.h
/petsc/include/petscsys.h
/petsc/share/petsc/saws/documentation
/petsc/share/petsc/saws/images/arrow.png
/petsc/share/petsc/saws/images/transition.bmp
/petsc/share/petsc/saws/js/PETSc.js
/petsc/share/petsc/saws/js/boxTree.js
/petsc/share/petsc/saws/js/defaults.js
/petsc/share/petsc/saws/js/drawDiagrams.js
/petsc/share/petsc/saws/js/events.js
/petsc/share/petsc/saws/js/getCmdOptions.js
/petsc/share/petsc/saws/js/listLogic.js
/petsc/share/petsc/saws/js/main.js
/petsc/share/petsc/saws/js/matrixTex.js
/petsc/share/petsc/saws/js/parsePrefix.js
/petsc/share/petsc/saws/js/populateLists.js
/petsc/share/petsc/saws/js/recordSawsData.js
/petsc/share/petsc/saws/js/tree.js
/petsc/share/petsc/saws/js/treeInterface.js
/petsc/share/petsc/saws/js/utils.js
/petsc/share/petsc/saws/linearsolveroptions.html
/petsc/share/petsc/saws/readme
/petsc/src/dm/examples/tutorials/ex15.c
/petsc/src/dm/impls/da/dacreate.c
/petsc/src/ksp/ksp/impls/cheby/cheby.c
/petsc/src/ksp/ksp/impls/cheby/chebyshevimpl.h
/petsc/src/ksp/ksp/interface/itcl.c
/petsc/src/ksp/ksp/interface/itcreate.c
/petsc/src/ksp/ksp/interface/itfunc.c
/petsc/src/ksp/ksp/interface/saws/kspsaws.c
/petsc/src/ksp/pc/impls/gamg/agg.c
/petsc/src/ksp/pc/impls/gamg/gamg.c
/petsc/src/ksp/pc/impls/mg/mg.c
/petsc/src/ksp/pc/interface/pcset.c
/petsc/src/ksp/pc/interface/precon.c
/petsc/src/mat/examples/tests/ex169.c
/petsc/src/mat/interface/matrix.c
/petsc/src/snes/examples/tutorials/ex19.c
/petsc/src/snes/interface/saws/snessaws.c
/petsc/src/snes/interface/snes.c
/petsc/src/sys/ams/makefile
/petsc/src/sys/classes/draw/interface/drawreg.c
/petsc/src/sys/classes/random/interface/randomc.c
/petsc/src/sys/classes/viewer/examples/tutorials/makefile
/petsc/src/sys/classes/viewer/impls/ams/ams.c
/petsc/src/sys/classes/viewer/interface/view.c
/petsc/src/sys/objects/aoptions.c
/petsc/src/sys/objects/options.c
/petsc/src/sys/objects/pinit.c
/petsc/src/sys/threadcomm/interface/threadcomm.c
/petsc/src/sys/utils/str.c
/petsc/src/ts/examples/tutorials/advection-diffusion-reaction/ex5.c
/petsc/src/ts/examples/tutorials/makefile
/petsc/src/ts/examples/tutorials/power_grid/makefile
/petsc/src/ts/examples/tutorials/power_grid/stability_9bus/makefile
arkimex/arkimex.c
/petsc/src/ts/interface/ts.c
/petsc/src/vec/vec/examples/tests/ex46.c
/petsc/src/vec/vec/examples/tests/makefile
/petsc/src/vec/vec/examples/tests/output/ex46_1_p1.out
/petsc/src/vec/vec/examples/tests/output/ex46_1_p12.out
/petsc/src/vec/vec/examples/tests/output/ex46_1_p6.out
/petsc/src/vec/vec/examples/tests/output/ex46_2_p6.out
0fd1780411-Feb-2015 Toby Isaac <tisaac@ices.utexas.edu>

Merge branch 'tisaac/simplify-register-all'

Removed the XXXRegisterAll() functions from the public interface. These should now only be handled by the package intialization functions.


/petsc/.mailmap
/petsc/config/PETSc/options/indexTypes.py
/petsc/config/PETSc/options/scalarTypes.py
/petsc/config/builder.py
/petsc/include/petsc-private/characteristicimpl.h
/petsc/include/petsc-private/dmimpl.h
/petsc/include/petsc-private/dmpleximpl.h
/petsc/include/petsc-private/drawimpl.h
/petsc/include/petsc-private/isimpl.h
/petsc/include/petsc-private/kspimpl.h
/petsc/include/petsc-private/linesearchimpl.h
/petsc/include/petsc-private/matimpl.h
/petsc/include/petsc-private/pcimpl.h
/petsc/include/petsc-private/petscdsimpl.h
/petsc/include/petsc-private/petscfeimpl.h
/petsc/include/petsc-private/petscfvimpl.h
/petsc/include/petsc-private/sfimpl.h
/petsc/include/petsc-private/snesimpl.h
/petsc/include/petsc-private/taoimpl.h
/petsc/include/petsc-private/tsimpl.h
/petsc/include/petsc-private/vecimpl.h
/petsc/include/petsc-private/viewerimpl.h
/petsc/include/petscao.h
/petsc/include/petsccharacteristic.h
/petsc/include/petscdm.h
/petsc/include/petscdmplex.h
/petsc/include/petscdraw.h
/petsc/include/petscds.h
/petsc/include/petscfe.h
/petsc/include/petscfv.h
/petsc/include/petscis.h
/petsc/include/petscksp.h
/petsc/include/petscmat.h
/petsc/include/petscoptions.h
/petsc/include/petscpc.h
/petsc/include/petscpf.h
/petsc/include/petscsf.h
/petsc/include/petscsnes.h
/petsc/include/petscsys.h
/petsc/include/petsctao.h
/petsc/include/petscts.h
/petsc/include/petscvec.h
/petsc/include/petscviewer.h
/petsc/src/dm/dt/interface/dtds.c
/petsc/src/dm/dt/interface/dtfe.c
/petsc/src/dm/dt/interface/dtfv.c
/petsc/src/dm/examples/tutorials/ex15.c
/petsc/src/dm/examples/tutorials/makefile
/petsc/src/dm/examples/tutorials/output/ex15_1.out
/petsc/src/dm/examples/tutorials/output/ex15_2.out
/petsc/src/dm/examples/tutorials/output/ex15_3.out
/petsc/src/dm/impls/da/gr2.c
/petsc/src/dm/impls/plex/examples/tests/output/ex1_19.out
/petsc/src/dm/impls/plex/examples/tests/output/ex1_20.out
/petsc/src/dm/impls/plex/plex.c
/petsc/src/dm/impls/plex/plexdistribute.c
/petsc/src/dm/impls/plex/plexorient.c
/petsc/src/dm/impls/plex/plexpartition.c
/petsc/src/dm/interface/dlregisdmdm.c
/petsc/src/dm/interface/dm.c
/petsc/src/dm/interface/dmregall.c
/petsc/src/docs/tex/manual/part2.tex
/petsc/src/ksp/ksp/examples/tests/ex37.c
/petsc/src/ksp/ksp/examples/tutorials/makefile
/petsc/src/ksp/ksp/interface/itcl.c
/petsc/src/ksp/ksp/interface/itregis.c
/petsc/src/ksp/pc/impls/bddc/bddcprivate.c
/petsc/src/ksp/pc/impls/bddc/bddcscalingbasic.c
/petsc/src/ksp/pc/impls/bjacobi/bjacobi.c
/petsc/src/ksp/pc/impls/factor/factimpl.c
/petsc/src/ksp/pc/impls/fieldsplit/fieldsplit.c
/petsc/src/ksp/pc/impls/mg/mg.c
/petsc/src/ksp/pc/impls/redundant/redundant.c
/petsc/src/ksp/pc/interface/pcregis.c
/petsc/src/ksp/pc/interface/pcset.c
/petsc/src/mat/coarsen/scoarsen.c
/petsc/src/mat/color/interface/matcoloring.c
/petsc/src/mat/color/interface/matcoloringregi.c
/petsc/src/mat/examples/tests/ex9.c
/petsc/src/mat/impls/dense/seq/dense.c
/petsc/src/mat/impls/fft/fftw/fftw.c
/petsc/src/mat/impls/mffd/mffdimpl.h
/petsc/src/mat/impls/mffd/mfregis.c
/petsc/src/mat/interface/matregis.c
/petsc/src/mat/interface/matrix.c
/petsc/src/mat/order/sorder.c
/petsc/src/mat/order/sregis.c
/petsc/src/mat/partition/spartition.c
/petsc/src/snes/interface/dlregissnes.c
/petsc/src/snes/interface/snes.c
/petsc/src/snes/interface/snesregi.c
/petsc/src/snes/linesearch/interface/linesearch.c
/petsc/src/snes/linesearch/interface/linesearchregi.c
/petsc/src/snes/utils/dmplexsnes.c
/petsc/src/sys/classes/draw/interface/draw.c
/petsc/src/sys/classes/draw/interface/drawregall.c
/petsc/src/sys/classes/random/interface/randomc.c
/petsc/src/sys/classes/random/interface/randreg.c
/petsc/src/sys/classes/random/randomimpl.h
/petsc/src/sys/classes/viewer/examples/tutorials/ex3.c
/petsc/src/sys/classes/viewer/examples/tutorials/makefile
/petsc/src/sys/classes/viewer/examples/tutorials/output/ex3_1_p1.out
/petsc/src/sys/classes/viewer/examples/tutorials/output/ex3_1_p12.out
/petsc/src/sys/classes/viewer/examples/tutorials/output/ex3_1_p6.out
/petsc/src/sys/classes/viewer/examples/tutorials/output/ex3_2_p6.out
/petsc/src/sys/classes/viewer/impls/ams/amsopen.c
/petsc/src/sys/classes/viewer/interface/view.c
/petsc/src/sys/classes/viewer/interface/viewregall.c
/petsc/src/sys/objects/aoptions.c
/petsc/src/sys/objects/subcomm.c
/petsc/src/sys/threadcomm/interface/threadcomm.c
/petsc/src/sys/threadcomm/interface/threadcommregi.c
/petsc/src/tao/interface/taosolver.c
/petsc/src/tao/interface/taosolverregi.c
/petsc/src/tao/unconstrained/examples/tutorials/rosenbrock1.c
/petsc/src/ts/adapt/interface/tsadapt.c
/petsc/src/ts/characteristic/interface/mocregis.c
implicit/gl/gladapt.c
/petsc/src/ts/interface/ts.c
/petsc/src/ts/interface/tsregall.c
/petsc/src/vec/is/ao/aoimpl.h
/petsc/src/vec/is/ao/interface/aoreg.c
/petsc/src/vec/is/ao/interface/aoregall.c
/petsc/src/vec/is/is/interface/isreg.c
/petsc/src/vec/is/is/interface/isregall.c
/petsc/src/vec/is/sf/interface/sfregi.c
/petsc/src/vec/pf/interface/pfall.c
/petsc/src/vec/pf/pfimpl.h
/petsc/src/vec/vec/interface/dlregisvec.c
/petsc/src/vec/vec/interface/vecreg.c
/petsc/src/vec/vec/interface/vecregall.c
/petsc/src/vec/vec/interface/vector.c
/petsc/src/vec/vec/utils/vecio.c
3188f60309-Feb-2015 Barry Smith <bsmith@mcs.anl.gov>

Merge branch 'barry/petsc-sa-refactor-rebase'


/petsc/include/petsc-finclude/petsctsdef.h
/petsc/include/petsc-private/tsimpl.h
/petsc/include/petscts.h
/petsc/lib/petsc-conf/bfort-petsc.txt
/petsc/src/docs/tex/manual/part2.tex
/petsc/src/ts/examples/tutorials/ex11_sa.c
/petsc/src/ts/examples/tutorials/ex16adj.c
/petsc/src/ts/examples/tutorials/ex16opt_ic.c
/petsc/src/ts/examples/tutorials/ex16opt_p.c
/petsc/src/ts/examples/tutorials/ex19.c
/petsc/src/ts/examples/tutorials/ex20adj.c
/petsc/src/ts/examples/tutorials/ex20opt_ic.c
/petsc/src/ts/examples/tutorials/ex20opt_p.c
/petsc/src/ts/examples/tutorials/ex9_sa.c
/petsc/src/ts/examples/tutorials/makefile
/petsc/src/ts/examples/tutorials/output/ex16_sa_1.out
/petsc/src/ts/examples/tutorials/output/ex16adj_1.out
/petsc/src/ts/examples/tutorials/output/ex16opt_ic_1.out
/petsc/src/ts/examples/tutorials/output/ex16opt_p_1.out
/petsc/src/ts/examples/tutorials/power_grid/ex1.c
/petsc/src/ts/examples/tutorials/power_grid/ex2.c
/petsc/src/ts/examples/tutorials/power_grid/ex3.c
/petsc/src/ts/examples/tutorials/power_grid/ex3adj.c
/petsc/src/ts/examples/tutorials/power_grid/ex3opt.c
/petsc/src/ts/examples/tutorials/power_grid/ex3opt_fd.c
/petsc/src/ts/examples/tutorials/power_grid/ex6.c
/petsc/src/ts/examples/tutorials/power_grid/ex7.c
/petsc/src/ts/examples/tutorials/power_grid/makefile
/petsc/src/ts/examples/tutorials/power_grid/output/ex1_1.out
/petsc/src/ts/examples/tutorials/power_grid/output/ex1_2.out
/petsc/src/ts/examples/tutorials/power_grid/output/ex2_1.out
/petsc/src/ts/examples/tutorials/power_grid/output/ex3adj_1.out
/petsc/src/ts/examples/tutorials/power_grid/output/ex3opt_1.out
/petsc/src/ts/examples/tutorials/power_grid/output/ex3opt_fd_1.out
/petsc/src/ts/examples/tutorials/power_grid/stability_9bus/ex9bus.c
/petsc/src/ts/examples/tutorials/power_grid/stability_9bus/ex9busadj.c
/petsc/src/ts/examples/tutorials/power_grid/stability_9bus/ex9busopt.c
/petsc/src/ts/examples/tutorials/power_grid/stability_9bus/ex9busopt_fd.c
/petsc/src/ts/examples/tutorials/power_grid/stability_9bus/makefile
/petsc/src/ts/examples/tutorials/power_grid/stability_9bus/output/ex9busadj_1.out
/petsc/src/ts/examples/tutorials/power_grid/stability_9bus/output/ex9busopt_1.out
/petsc/src/ts/examples/tutorials/power_grid/stability_9bus/output/ex9busopt_fd_1.out
/petsc/src/ts/examples/tutorials/power_grid/stability_9bus/petscoptions
explicit/rk/rk.c
implicit/theta/theta.c
/petsc/src/ts/interface/dlregists.c
/petsc/src/ts/interface/ts.c
/petsc/src/ts/makefile
/petsc/src/ts/trajectory/impls/basic/makefile
/petsc/src/ts/trajectory/impls/basic/trajbasic.c
/petsc/src/ts/trajectory/impls/makefile
/petsc/src/ts/trajectory/interface/makefile
/petsc/src/ts/trajectory/interface/traj.c
/petsc/src/ts/trajectory/makefile
/petsc/src/vec/vec/interface/vector.c
/petsc/tutorials/HandsOnExercise.html
9d414b0e09-Feb-2015 Satish Balay <balay@mcs.anl.gov>

Merge branch 'maint'

Conflicts:
src/mat/impls/baij/seq/baij.h
src/mat/impls/sbaij/mpi/mpisbaij.c
src/mat/impls/sbaij/seq/sbaij.h


/petsc/bin/maint/buildtest
/petsc/bin/maint/generatefortranstubs.py
/petsc/bin/maint/toclapack.sh
/petsc/bin/maint/wwwindex.py
/petsc/bin/petsc-pythonscripts/PetscBinaryIO.py
/petsc/bin/petsc-pythonscripts/petsc_gen_xdmf.py
/petsc/config/BuildSystem/config/packages/MOAB.py
/petsc/config/BuildSystem/config/packages/MPI.py
/petsc/config/BuildSystem/config/packages/MUMPS.py
/petsc/config/BuildSystem/config/packages/PaStiX.py
/petsc/config/BuildSystem/config/packages/SuiteSparse.py
/petsc/config/BuildSystem/config/packages/ctetgen.py
/petsc/config/BuildSystem/config/packages/f2cblaslapack.py
/petsc/config/BuildSystem/config/packages/ml.py
/petsc/config/BuildSystem/config/packages/scalapack.py
/petsc/config/BuildSystem/config/packages/sowing.py
/petsc/config/PETSc/Configure.py
/petsc/config/builder.py
/petsc/config/gmakegen.py
/petsc/config/install.py
/petsc/gmakefile
/petsc/include/petsc-finclude/ftn-custom/petscsnes.h90
/petsc/include/petsc-finclude/petscdt.h90
/petsc/include/petsc-private/dmimpl.h
/petsc/include/petsc-private/matimpl.h
/petsc/include/petsc-private/pcgamgimpl.h
/petsc/include/petsc-private/pcmgimpl.h
/petsc/include/petsc-private/petscfeimpl.h
/petsc/include/petsc-private/petscfvimpl.h
/petsc/include/petsc-private/vecimpl.h
/petsc/include/petsc.h
/petsc/include/petscdm.h
/petsc/include/petscdmda.h
/petsc/include/petscdmplex.h
/petsc/include/petscdmredundant.h
/petsc/include/petscds.h
/petsc/include/petscdt.h
/petsc/include/petscerror.h
/petsc/include/petscfe.h
/petsc/include/petscfv.h
/petsc/include/petscksp.h
/petsc/include/petscmat.h
/petsc/include/petscpc.h
/petsc/include/petscsnes.h
/petsc/include/petscsys.h
/petsc/include/petscts.h
/petsc/include/petscvec.h
/petsc/include/petscversion.h
/petsc/lib/petsc-conf/bfort-base.txt
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/petsc/src/mat/impls/dense/mpi/mpidense.c
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/petsc/src/snes/examples/tutorials/ex64.c
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/petsc/src/snes/examples/tutorials/makefile
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/petsc/src/snes/impls/ls/ls.c
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/petsc/src/snes/interface/snesj.c
/petsc/src/snes/interface/snesob.c
/petsc/src/snes/linesearch/impls/makefile
/petsc/src/snes/linesearch/impls/nleqerr/linesearchnleqerr.c
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/petsc/src/snes/linesearch/interface/linesearchregi.c
/petsc/src/snes/utils/dmdasnes.c
/petsc/src/snes/utils/dmplexsnes.c
/petsc/src/sys/classes/matlabengine/matlab.c
/petsc/src/sys/classes/viewer/impls/binary/binv.c
/petsc/src/sys/fileio/mprint.c
/petsc/src/sys/objects/aoptions.c
/petsc/src/sys/objects/pname.c
/petsc/src/sys/threadcomm/interface/threadcommred.c
/petsc/src/sys/webclient/box.c
/petsc/src/sys/webclient/globus.c
/petsc/src/sys/webclient/google.c
/petsc/src/sys/webclient/textbelt.c
/petsc/src/tao/linesearch/impls/gpcglinesearch/gpcglinesearch.c
/petsc/src/tao/pde_constrained/examples/tutorials/elliptic.c
/petsc/src/ts/characteristic/interface/slregis.c
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/petsc/src/ts/examples/tutorials/ex2f.F
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/petsc/src/ts/examples/tutorials/ex34.c
/petsc/src/ts/examples/tutorials/ex40.c
/petsc/src/ts/examples/tutorials/ex41.c
/petsc/src/ts/examples/tutorials/ex7.c
/petsc/src/ts/examples/tutorials/ex8.c
/petsc/src/ts/examples/tutorials/ex9.c
/petsc/src/ts/examples/tutorials/output/ex11_10.out
/petsc/src/ts/examples/tutorials/output/ex18_adv_0.out
/petsc/src/ts/examples/tutorials/output/ex18_adv_1.out
/petsc/src/ts/examples/tutorials/output/ex18_adv_2.out
/petsc/src/ts/examples/tutorials/output/ex18_p1p1.out
/petsc/src/ts/examples/tutorials/output/ex18_p1p1_xper.out
/petsc/src/ts/examples/tutorials/output/ex18_p1p1_xper_ref.out
/petsc/src/ts/examples/tutorials/output/ex18_p1p1_xyper.out
/petsc/src/ts/examples/tutorials/output/ex18_p1p1_xyper_ref.out
/petsc/src/ts/examples/tutorials/output/ex18_p2p1.out
/petsc/src/ts/examples/tutorials/output/ex18_p2p1_xyper.out
/petsc/src/ts/examples/tutorials/output/ex18_p2p1_xyper_ref.out
/petsc/src/ts/examples/tutorials/phasefield/biharmonic.c
/petsc/src/ts/examples/tutorials/phasefield/biharmonic2.c
/petsc/src/ts/examples/tutorials/phasefield/biharmonic3.c
/petsc/src/ts/examples/tutorials/phasefield/heat.c
/petsc/src/ts/examples/tutorials/power_grid/ex1.c
/petsc/src/ts/examples/tutorials/power_grid/ex2.c
/petsc/src/ts/examples/tutorials/power_grid/ex5.c
/petsc/src/ts/examples/tutorials/power_grid/ex6.c
/petsc/src/ts/examples/tutorials/power_grid/ex7.c
/petsc/src/ts/examples/tutorials/power_grid/ex8.c
arkimex/arkimex.c
rosw/rosw.c
/petsc/src/ts/interface/ts.c
/petsc/src/ts/utils/dmplexts.c
/petsc/src/vec/is/is/utils/isdiff.c
/petsc/src/vec/is/sf/interface/sf.c
/petsc/src/vec/vec/impls/hypre/vhyp.c
/petsc/src/vec/vec/impls/seq/seqcusp/cuspvecimpl.h
/petsc/src/vec/vec/impls/seq/seqcusp/veccusp.cu
/petsc/src/vec/vec/impls/seq/seqviennacl/vecviennacl.cxx
/petsc/src/vec/vec/impls/seq/seqviennacl/viennaclvecimpl.h
/petsc/src/vec/vec/interface/ftn-custom/zvectorf.c
/petsc/src/vec/vec/interface/rvector.c
/petsc/src/vec/vec/interface/vector.c
/petsc/src/vec/vec/utils/vinv.c
/petsc/src/vec/vec/utils/vscat.c
/petsc/tutorials/HandsOnExercise.html
844594ba06-Feb-2015 Barry Smith <bsmith@mcs.anl.gov>

removed unused variables in bus adjoint examples
fix uninitialized variables issues for adjoint solver


/petsc/src/ts/examples/tutorials/ex16opt_p.c
/petsc/src/ts/examples/tutorials/power_grid/stability_9bus/ex9bus.c
/petsc/src/ts/examples/tutorials/power_grid/stability_9bus/ex9busadj.c
/petsc/src/ts/examples/tutorials/power_grid/stability_9bus/ex9busopt.c
/petsc/src/ts/examples/tutorials/power_grid/stability_9bus/ex9busopt_fd.c
explicit/rk/rk.c
/petsc/src/ts/interface/ts.c
d0685a9005-Feb-2015 Jed Brown <jed@jedbrown.org>

TS: man page spelling and links


/petsc/bin/maint/buildtest
/petsc/bin/maint/generatefortranstubs.py
/petsc/bin/pythonscripts/PetscBinaryIO.py
/petsc/config/PETSc/packages/PaStiX.py
/petsc/config/PETSc/packages/ml.py
/petsc/include/finclude/ftn-custom/petscmat.h90
/petsc/include/petsc-private/pcimpl.h
/petsc/include/petscpc.h
/petsc/include/petscversion.h
/petsc/makefile
/petsc/setup.py
/petsc/src/dm/impls/da/dagtol.c
/petsc/src/dm/interface/dm.c
/petsc/src/docs/website/download/index.html
/petsc/src/ksp/ksp/impls/lsqr/lsqr.c
/petsc/src/ksp/ksp/interface/itcl.c
/petsc/src/ksp/ksp/interface/itcreate.c
/petsc/src/ksp/ksp/interface/itfunc.c
/petsc/src/ksp/pc/impls/bjacobi/bjacobi.c
/petsc/src/ksp/pc/impls/mg/mg.c
/petsc/src/ksp/pc/interface/precon.c
/petsc/src/mat/impls/aij/mpi/mpiaij.c
/petsc/src/mat/impls/baij/mpi/mpibaij.c
/petsc/src/mat/impls/baij/seq/baij.c
/petsc/src/mat/impls/sbaij/mpi/mpisbaij.c
/petsc/src/mat/impls/sbaij/seq/sbaij.c
arkimex/arkimex.c
rosw/rosw.c
/petsc/src/vec/is/is/utils/isdiff.c
/petsc/src/vec/vec/examples/tutorials/ex6.c
/petsc/src/vec/vec/interface/ftn-custom/zvectorf.c
/petsc/src/vec/vec/interface/rvector.c
cef7686805-Feb-2015 Barry Smith <bsmith@mcs.anl.gov>

fix TSTrajectory for Fortran
remove illegal declaration of variable within code


/petsc/include/petsc-finclude/petsctsdef.h
/petsc/include/petscts.h
/petsc/lib/petsc-conf/bfort-petsc.txt
/petsc/src/ts/adapt/interface/tsadapt.c
/petsc/src/ts/examples/tutorials/ex16adj.c
/petsc/src/ts/examples/tutorials/ex16opt_ic.c
/petsc/src/ts/examples/tutorials/ex16opt_p.c
/petsc/src/ts/examples/tutorials/ex20adj.c
/petsc/src/ts/examples/tutorials/ex20opt_ic.c
/petsc/src/ts/examples/tutorials/ex20opt_p.c
/petsc/src/ts/examples/tutorials/makefile
/petsc/src/ts/examples/tutorials/power_grid/ex1.c
/petsc/src/ts/examples/tutorials/power_grid/ex3.c
/petsc/src/ts/examples/tutorials/power_grid/ex3adj.c
/petsc/src/ts/examples/tutorials/power_grid/ex3opt.c
/petsc/src/ts/examples/tutorials/power_grid/ex3opt_fd.c
/petsc/src/ts/examples/tutorials/power_grid/ex6.c
/petsc/src/ts/examples/tutorials/power_grid/makefile
/petsc/src/ts/examples/tutorials/power_grid/output/ex1_1.out
/petsc/src/ts/examples/tutorials/power_grid/output/ex1_2.out
/petsc/src/ts/examples/tutorials/power_grid/output/ex2_1.out
/petsc/src/ts/examples/tutorials/power_grid/stability_9bus/ex9busadj.c
/petsc/src/ts/examples/tutorials/power_grid/stability_9bus/ex9busopt.c
/petsc/src/ts/examples/tutorials/power_grid/stability_9bus/ex9busopt_fd.c
/petsc/src/ts/examples/tutorials/power_grid/stability_9bus/makefile
explicit/rk/rk.c
/petsc/src/ts/interface/ts.c
/petsc/src/ts/trajectory/impls/basic/makefile
/petsc/src/ts/trajectory/impls/makefile
/petsc/src/ts/trajectory/interface/makefile
/petsc/src/ts/trajectory/interface/traj.c
/petsc/src/ts/trajectory/makefile
5bf8c56703-Feb-2015 Barry Smith <bsmith@mcs.anl.gov>

drop the P from TSAdjointSetRHSJacobian() remove C++ commments from adjoint examples


/petsc/include/petsc-private/tsimpl.h
/petsc/include/petscts.h
/petsc/src/docs/tex/manual/part2.tex
/petsc/src/ts/examples/tutorials/ex11_sa.c
/petsc/src/ts/examples/tutorials/ex16adj.c
/petsc/src/ts/examples/tutorials/ex16opt_ic.c
/petsc/src/ts/examples/tutorials/ex16opt_p.c
/petsc/src/ts/examples/tutorials/ex20adj.c
/petsc/src/ts/examples/tutorials/ex20opt_p.c
/petsc/src/ts/examples/tutorials/ex9_sa.c
/petsc/src/ts/examples/tutorials/power_grid/ex3adj.c
/petsc/src/ts/examples/tutorials/power_grid/ex3opt.c
/petsc/src/ts/examples/tutorials/power_grid/ex3opt_fd.c
/petsc/src/ts/examples/tutorials/power_grid/ex7.c
/petsc/src/ts/examples/tutorials/power_grid/stability_9bus/ex9busadj.c
/petsc/src/ts/examples/tutorials/power_grid/stability_9bus/ex9busopt.c
/petsc/src/ts/examples/tutorials/power_grid/stability_9bus/ex9busopt_fd.c
explicit/rk/rk.c
implicit/theta/theta.c
/petsc/src/ts/interface/ts.c
2c39e10603-Feb-2015 Barry Smith <bsmith@mcs.anl.gov>

remove solution vector from calling sequence of TSAjointSolve()
change Quadrature name to Integral to match use of Integrand name and clarity to users for TSAdjoint


/petsc/include/petsc-private/tsimpl.h
/petsc/include/petscts.h
/petsc/src/ts/examples/tutorials/ex16adj.c
/petsc/src/ts/examples/tutorials/ex16opt_ic.c
/petsc/src/ts/examples/tutorials/ex16opt_p.c
/petsc/src/ts/examples/tutorials/power_grid/ex3adj.c
/petsc/src/ts/examples/tutorials/power_grid/ex3opt.c
/petsc/src/ts/examples/tutorials/power_grid/ex3opt_fd.c
/petsc/src/ts/examples/tutorials/power_grid/stability_9bus/ex9busadj.c
/petsc/src/ts/examples/tutorials/power_grid/stability_9bus/ex9busopt.c
implicit/theta/theta.c
/petsc/src/ts/interface/ts.c
42f2b33902-Feb-2015 Barry Smith <bsmith@mcs.anl.gov>

fix naming of TSAdjoint function pointers


/petsc/include/petsc-private/tsimpl.h
/petsc/include/petscts.h
/petsc/src/ts/examples/tutorials/ex16adj.c
/petsc/src/ts/examples/tutorials/ex16opt_ic.c
/petsc/src/ts/examples/tutorials/ex16opt_p.c
/petsc/src/ts/examples/tutorials/power_grid/ex3.c
/petsc/src/ts/examples/tutorials/power_grid/ex3adj.c
/petsc/src/ts/examples/tutorials/power_grid/ex3opt.c
/petsc/src/ts/examples/tutorials/power_grid/ex3opt_fd.c
/petsc/src/ts/examples/tutorials/power_grid/stability_9bus/ex9busadj.c
/petsc/src/ts/examples/tutorials/power_grid/stability_9bus/ex9busopt.c
explicit/rk/rk.c
implicit/theta/theta.c
/petsc/src/ts/interface/dlregists.c
/petsc/src/ts/interface/ts.c
/petsc/src/ts/makefile
/petsc/src/ts/trajectory/impls/basic/makefile
/petsc/src/ts/trajectory/impls/basic/trajbasic.c
/petsc/src/ts/trajectory/impls/makefile
/petsc/src/ts/trajectory/interface/makefile
/petsc/src/ts/trajectory/interface/traj.c
/petsc/src/ts/trajectory/makefile
08c7845f04-Feb-2015 Barry Smith <bsmith@mcs.anl.gov>

more merges in rebase


/petsc/include/petsc-private/tsimpl.h
/petsc/include/petscts.h
/petsc/src/docs/tex/manual/part2.tex
/petsc/src/ts/examples/tutorials/ex16adj.c
/petsc/src/ts/examples/tutorials/ex16opt_ic.c
/petsc/src/ts/examples/tutorials/ex16opt_p.c
/petsc/src/ts/examples/tutorials/ex20adj.c
/petsc/src/ts/examples/tutorials/ex20opt_ic.c
/petsc/src/ts/examples/tutorials/ex20opt_p.c
/petsc/src/ts/examples/tutorials/makefile
/petsc/src/ts/examples/tutorials/power_grid/ex3adj.c
/petsc/src/ts/examples/tutorials/power_grid/ex3opt.c
/petsc/src/ts/examples/tutorials/power_grid/ex3opt_fd.c
/petsc/src/ts/examples/tutorials/power_grid/stability_9bus/ex9busadj.c
/petsc/src/ts/examples/tutorials/power_grid/stability_9bus/ex9busopt.c
/petsc/src/ts/examples/tutorials/power_grid/stability_9bus/ex9busopt_fd.c
explicit/rk/rk.c
implicit/theta/theta.c
/petsc/src/ts/interface/ts.c
/petsc/src/vec/vec/interface/vector.c
b4dd3bf931-Jan-2015 Barry Smith <bsmith@mcs.anl.gov>

remove other memory leaks from TSAdjoint codes
fix some C99 code


/petsc/src/ts/examples/tutorials/power_grid/ex3opt.c
/petsc/src/ts/examples/tutorials/power_grid/ex3opt_fd.c
/petsc/src/ts/examples/tutorials/power_grid/stability_9bus/ex9busopt_fd.c
implicit/theta/theta.c
f6a906c031-Jan-2015 Barry Smith <bsmith@mcs.anl.gov>

Fixed major memory leak in rk adjoint solver because ts->setup was reset to zero when entering reverse mode which caused all basic TS work objects to be created a second time.

Fixed by adding a TSAd

Fixed major memory leak in rk adjoint solver because ts->setup was reset to zero when entering reverse mode which caused all basic TS work objects to be created a second time.

Fixed by adding a TSAdjointSetUp() for its own work objects and not calling the original setup multiple times.

show more ...


/petsc/include/petsc-private/tsimpl.h
/petsc/include/petscts.h
/petsc/src/ts/examples/tutorials/ex16adj.c
explicit/rk/rk.c
/petsc/src/ts/interface/ts.c
d4aa0a5830-Jan-2015 Barry Smith <bsmith@mcs.anl.gov>

add output files for make tests for TSAdjoint examples
include power-system and stability-bus directories to automatic testing!
Rename basic functions of discrete adjoint integrators as first step of

add output files for make tests for TSAdjoint examples
include power-system and stability-bus directories to automatic testing!
Rename basic functions of discrete adjoint integrators as first step of refactorization

show more ...


/petsc/include/petsc-private/tsimpl.h
/petsc/include/petscts.h
/petsc/src/docs/tex/manual/part2.tex
/petsc/src/ts/examples/tutorials/ex16_sa.c
/petsc/src/ts/examples/tutorials/ex16adj.c
/petsc/src/ts/examples/tutorials/ex16opt_ic.c
/petsc/src/ts/examples/tutorials/ex16opt_p.c
/petsc/src/ts/examples/tutorials/ex20adj.c
/petsc/src/ts/examples/tutorials/ex20opt_ic.c
/petsc/src/ts/examples/tutorials/ex20opt_p.c
/petsc/src/ts/examples/tutorials/makefile
/petsc/src/ts/examples/tutorials/output/ex16_sa_1.out
/petsc/src/ts/examples/tutorials/output/ex16adj_1.out
/petsc/src/ts/examples/tutorials/output/ex16opt_ic_1.out
/petsc/src/ts/examples/tutorials/output/ex16opt_p_1.out
/petsc/src/ts/examples/tutorials/power_grid/ex2.c
/petsc/src/ts/examples/tutorials/power_grid/ex3adj.c
/petsc/src/ts/examples/tutorials/power_grid/ex3opt.c
/petsc/src/ts/examples/tutorials/power_grid/ex3opt_fd.c
/petsc/src/ts/examples/tutorials/power_grid/makefile
/petsc/src/ts/examples/tutorials/power_grid/output/ex3adj_1.out
/petsc/src/ts/examples/tutorials/power_grid/output/ex3opt_1.out
/petsc/src/ts/examples/tutorials/power_grid/output/ex3opt_fd_1.out
/petsc/src/ts/examples/tutorials/power_grid/stability_9bus/ex9busadj.c
/petsc/src/ts/examples/tutorials/power_grid/stability_9bus/ex9busopt.c
/petsc/src/ts/examples/tutorials/power_grid/stability_9bus/makefile
/petsc/src/ts/examples/tutorials/power_grid/stability_9bus/output/ex9busadj_1.out
/petsc/src/ts/examples/tutorials/power_grid/stability_9bus/output/ex9busopt_1.out
/petsc/src/ts/examples/tutorials/power_grid/stability_9bus/output/ex9busopt_fd_1.out
explicit/rk/rk.c
implicit/theta/theta.c
/petsc/src/ts/interface/ts.c
39d1366615-Jan-2015 Hong Zhang <hongzhang@anl.gov>

fixed possible memory leakage in both ex9busopt and theta.c


/petsc/src/docs/tex/manual/part2.tex
/petsc/src/ts/examples/tutorials/power_grid/ex3adj.c
/petsc/src/ts/examples/tutorials/power_grid/ex3opt.c
/petsc/src/ts/examples/tutorials/power_grid/ex3opt_fd.c
/petsc/src/ts/examples/tutorials/power_grid/makefile
/petsc/src/ts/examples/tutorials/power_grid/stability_9bus/ex9busadj.c
/petsc/src/ts/examples/tutorials/power_grid/stability_9bus/ex9busopt.c
/petsc/src/ts/examples/tutorials/power_grid/stability_9bus/ex9busopt_fd.c
/petsc/src/ts/examples/tutorials/power_grid/stability_9bus/makefile
/petsc/src/ts/examples/tutorials/power_grid/stability_9bus/petscoptions
implicit/theta/theta.c
/petsc/tutorials/HandsOnExercise.html
a2ae3dd204-Dec-2014 Hong Zhang <hongzhang@anl.gov>

Simplify several function definitions


/petsc/include/petsc-private/tsimpl.h
/petsc/include/petscts.h
/petsc/src/ts/examples/tutorials/power_grid/ex3.c
/petsc/src/ts/examples/tutorials/power_grid/ex3adj.c
implicit/theta/theta.c
/petsc/src/ts/interface/ts.c
36eaed6026-Nov-2014 Hong Zhang <hongzhang@anl.gov>

add integral terms in the cost function


/petsc/include/petsc-private/tsimpl.h
/petsc/include/petscts.h
implicit/theta/theta.c
/petsc/src/ts/interface/ts.c
05755b9c24-Nov-2014 Hong Zhang <hongzhang@anl.gov>

add drdp drdy functions


/petsc/include/petsc-private/tsimpl.h
/petsc/include/petscts.h
/petsc/src/docs/tex/manual/part2.tex
/petsc/src/ts/examples/tutorials/ex16adj.c
/petsc/src/ts/examples/tutorials/ex16opt_ic.c
/petsc/src/ts/examples/tutorials/ex16opt_p.c
/petsc/src/ts/examples/tutorials/ex20adj.c
/petsc/src/ts/examples/tutorials/ex20opt_ic.c
/petsc/src/ts/examples/tutorials/ex20opt_p.c
/petsc/src/ts/examples/tutorials/makefile
implicit/theta/theta.c
/petsc/src/ts/interface/ts.c
3fd5220512-Nov-2014 Hong Zhang <hongzhang@anl.gov>

Implemented sensitivities wrt parameters for Theta methods


implicit/theta/theta.c
3c54f92c06-Nov-2014 Hong Zhang <hongzhang@anl.gov>

Big Fix: true discrete adjoint is up!


/petsc/src/ts/examples/tutorials/ex16_sa.c
/petsc/src/ts/examples/tutorials/ex16adj.c
/petsc/src/ts/examples/tutorials/ex16opt_ic.c
/petsc/src/ts/examples/tutorials/ex20opt_ic.c
/petsc/src/ts/examples/tutorials/makefile
implicit/theta/theta.c
a4cab89603-Nov-2014 Hong Zhang <hongzhang@anl.gov>

fix adjoint Theta


/petsc/src/ts/examples/tutorials/ex16adj.c
implicit/theta/theta.c
2ca6e92031-Oct-2014 Hong Zhang <hongzhang@anl.gov>

Adjoint Theta methods added, but tested yet


implicit/theta/theta.c
4268209628-Oct-2014 Hong Zhang <hongzhang@anl.gov>

add GetStages() for theta methods


/petsc/src/ts/examples/tutorials/ex16opt_ic.c
/petsc/src/ts/examples/tutorials/makefile
implicit/theta/theta.c
6497ce1427-Oct-2014 Hong Zhang <hongzhang@anl.gov>

Sensitivity w.r.t. parameters is optional now


/petsc/src/ts/examples/tutorials/ex16opt_p.c
/petsc/src/ts/examples/tutorials/makefile
explicit/rk/rk.c
/petsc/src/ts/interface/ts.c

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