History log of /petsc/src/ts/impls/ (Results 676 – 700 of 1345)
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9eef816d17-Oct-2013 Jed Brown <jedbrown@mcs.anl.gov>

TSARKIMEX: track whether cached stages are available

Instead of relying on an outdated indirect condition, now we explicitly
track whether stages from the last step are valid (and can be used to
ini

TSARKIMEX: track whether cached stages are available

Instead of relying on an outdated indirect condition, now we explicitly
track whether stages from the last step are valid (and can be used to
initialize) solves on the current step.

show more ...


/petsc/src/ts/examples/tutorials/makefile
/petsc/src/ts/examples/tutorials/output/ex8_1.out
arkimex/arkimex.c
5dceddf727-Aug-2013 Debojyoti Ghosh <ghosh@mcs.anl.gov>

In TSARKIMEX, If b is not specified, it is equal to bt, not last row of At


arkimex/arkimex.c
a264d7a610-Sep-2013 Barry Smith <bsmith@mcs.anl.gov>

fix name for PetscOptionsFList() and get FList() and EList() working properly with SAWs legal values


/petsc/bin/maint/toclapack.sh
/petsc/bin/matlab/PetscReadBinaryMatlab.m
/petsc/bin/matlab/classes/matlabheader.h
/petsc/bin/saws/SAWs.py
/petsc/bin/saws/getSAWs.bash
/petsc/bin/saws/getStack.bash
/petsc/conf/test
/petsc/config/BuildSystem/config/package.py
/petsc/config/BuildSystem/config/packages/BlasLapack.py
/petsc/config/BuildSystem/config/packages/f2cblaslapack.py
/petsc/config/BuildSystem/config/packages/hdf5.py
/petsc/config/PETSc/packages/metis.py
/petsc/config/PETSc/packages/openmp.py
/petsc/config/PETSc/packages/pARMS.py
/petsc/config/PETSc/packages/parmetis.py
/petsc/config/PETSc/packages/saws.py
/petsc/config/PETSc/packages/scalapack.py
/petsc/config/PETSc/packages/uams.py
/petsc/config/PETSc/packages/valgrind.py
/petsc/config/builder.py
/petsc/config/cmakeboot.py
/petsc/include/finclude/petscviewer.h
/petsc/include/finclude/petscviewerdef.h
/petsc/include/petsc-private/dmimpl.h
/petsc/include/petsc-private/dmpleximpl.h
/petsc/include/petsc-private/drawimpl.h
/petsc/include/petsc-private/kspimpl.h
/petsc/include/petsc-private/petscimpl.h
/petsc/include/petsc-private/snesimpl.h
/petsc/include/petscao.h
/petsc/include/petscdm.h
/petsc/include/petscdmda.h
/petsc/include/petscdmplex.h
/petsc/include/petscdmshell.h
/petsc/include/petscdraw.h
/petsc/include/petscerror.h
/petsc/include/petscksp.h
/petsc/include/petscoptions.h
/petsc/include/petscpc.h
/petsc/include/petscsys.h
/petsc/include/petscvec.h
/petsc/include/petscviewer.h
/petsc/include/petscviewersaws.h
/petsc/share/petsc/datafiles/meshes/annulus-20.exo
/petsc/share/petsc/datafiles/meshes/simpleblock-100.exo
/petsc/src/benchmarks/benchmarkExample.py
/petsc/src/contrib/fun3d/incomp/flow.c
/petsc/src/dm/examples/tests/ex22.c
/petsc/src/dm/examples/tests/ex26.c
/petsc/src/dm/examples/tests/ex30.c
/petsc/src/dm/examples/tests/ex35.c
/petsc/src/dm/examples/tests/ex42.c
/petsc/src/dm/examples/tests/ex9.c
/petsc/src/dm/examples/tests/makefile
/petsc/src/dm/examples/tutorials/ex14.c
/petsc/src/dm/impls/adda/adda.c
/petsc/src/dm/impls/composite/pack.c
/petsc/src/dm/impls/composite/packimpl.h
/petsc/src/dm/impls/composite/packm.c
/petsc/src/dm/impls/da/da.c
/petsc/src/dm/impls/da/da2.c
/petsc/src/dm/impls/da/dacreate.c
/petsc/src/dm/impls/da/dadist.c
/petsc/src/dm/impls/da/dageometry.c
/petsc/src/dm/impls/da/fdda.c
/petsc/src/dm/impls/da/gr2.c
/petsc/src/dm/impls/da/grvtk.c
/petsc/src/dm/impls/mesh/examples/tutorials/ex4f90.F
/petsc/src/dm/impls/mesh/mesh.c
/petsc/src/dm/impls/mesh/meshcreate.c
/petsc/src/dm/impls/mesh/section.c
/petsc/src/dm/impls/patch/patchcreate.c
/petsc/src/dm/impls/plex/examples/tests/ex5.c
/petsc/src/dm/impls/plex/examples/tests/ex7.c
/petsc/src/dm/impls/plex/examples/tests/ex8.c
/petsc/src/dm/impls/plex/examples/tests/ex9.c
/petsc/src/dm/impls/plex/examples/tests/output/ex5_0.out
/petsc/src/dm/impls/plex/examples/tests/output/ex5_1.out
/petsc/src/dm/impls/plex/examples/tests/output/ex5_2.out
/petsc/src/dm/impls/plex/examples/tests/output/ex5_3.out
/petsc/src/dm/impls/plex/examples/tests/output/ex5_4.out
/petsc/src/dm/impls/plex/examples/tests/output/ex5_5.out
/petsc/src/dm/impls/plex/examples/tests/output/ex5_6.out
/petsc/src/dm/impls/plex/examples/tests/output/ex5_7.out
/petsc/src/dm/impls/plex/examples/tests/output/ex5_8.out
/petsc/src/dm/impls/plex/examples/tests/output/ex8_0.out
/petsc/src/dm/impls/plex/examples/tests/output/ex8_1.out
/petsc/src/dm/impls/plex/examples/tests/output/ex8_2.out
/petsc/src/dm/impls/plex/examples/tests/output/ex8_3.out
/petsc/src/dm/impls/plex/examples/tests/output/ex8_4.out
/petsc/src/dm/impls/plex/examples/tests/output/ex8_5.out
/petsc/src/dm/impls/plex/f90-custom/zplexf90.c
/petsc/src/dm/impls/plex/plex.c
/petsc/src/dm/impls/plex/plexcgns.c
/petsc/src/dm/impls/plex/plexcreate.c
/petsc/src/dm/impls/plex/plexexodusii.c
/petsc/src/dm/impls/plex/plexfem.c
/petsc/src/dm/impls/plex/plexgeometry.c
/petsc/src/dm/impls/plex/plexinterpolate.c
/petsc/src/dm/impls/plex/plexpreallocate.c
/petsc/src/dm/impls/plex/plexsubmesh.c
/petsc/src/dm/impls/plex/plexvtk.c
/petsc/src/dm/impls/plex/plexvtu.c
/petsc/src/dm/impls/redundant/dmredundant.c
/petsc/src/dm/impls/shell/dmshell.c
/petsc/src/dm/impls/shell/ftn-custom/zdmshellf.c
/petsc/src/dm/impls/sliced/sliced.c
/petsc/src/dm/interface/dlregisdmdm.c
/petsc/src/dm/interface/dm.c
/petsc/src/dm/interface/dmi.c
/petsc/src/dm/interface/ftn-custom/zdmf.c
/petsc/src/docs/manualpages-sec/header_PetscSF
/petsc/src/docs/tex/manual/part2.tex
/petsc/src/docs/tex/petsc.bib
/petsc/src/docs/tex/petscapp.bib
/petsc/src/docs/website/documentation/bugreporting.html
/petsc/src/docs/website/documentation/changes/dev.html
/petsc/src/docs/website/documentation/codemanagement.html
/petsc/src/docs/website/documentation/copyright.html
/petsc/src/docs/website/documentation/faq.html
/petsc/src/docs/website/documentation/index.html
/petsc/src/docs/website/documentation/installation.html
/petsc/src/docs/website/documentation/linearsolvertable.html
/petsc/src/docs/website/documentation/referencing.html
/petsc/src/docs/website/documentation/saws.html
/petsc/src/docs/website/documentation/tutorials/index.html
/petsc/src/docs/website/download/index.html
/petsc/src/docs/website/index.html
/petsc/src/ksp/ksp/examples/tests/ex21.c
/petsc/src/ksp/ksp/examples/tests/ex32.c
/petsc/src/ksp/ksp/examples/tests/ex35.c
/petsc/src/ksp/ksp/examples/tests/ex41.c
/petsc/src/ksp/ksp/examples/tutorials/ex18.c
/petsc/src/ksp/ksp/examples/tutorials/ex31.c
/petsc/src/ksp/ksp/examples/tutorials/ex39.c
/petsc/src/ksp/ksp/examples/tutorials/ex4.c
/petsc/src/ksp/ksp/examples/tutorials/ex40.c
/petsc/src/ksp/ksp/examples/tutorials/ex42.c
/petsc/src/ksp/ksp/examples/tutorials/ex43.c
/petsc/src/ksp/ksp/examples/tutorials/ex44f.F90
/petsc/src/ksp/ksp/examples/tutorials/ex46.c
/petsc/src/ksp/ksp/examples/tutorials/ex49.c
/petsc/src/ksp/ksp/impls/bcgs/bcgs.c
/petsc/src/ksp/ksp/impls/bcgs/fbcgs/fbcgs.c
/petsc/src/ksp/ksp/impls/bcgs/fbcgsr/fbcgsr.c
/petsc/src/ksp/ksp/impls/bcgsl/bcgsl.c
/petsc/src/ksp/ksp/impls/bicg/bicg.c
/petsc/src/ksp/ksp/impls/cgs/cgs.c
/petsc/src/ksp/ksp/impls/cheby/cheby.c
/petsc/src/ksp/ksp/impls/cr/cr.c
/petsc/src/ksp/ksp/impls/gmres/agmres/agmres.c
/petsc/src/ksp/ksp/impls/gmres/agmres/agmresleja.c
/petsc/src/ksp/ksp/impls/gmres/dgmres/dgmres.c
/petsc/src/ksp/ksp/impls/gmres/dgmres/dgmresimpl.h
/petsc/src/ksp/ksp/impls/gmres/fgmres/fgmres.c
/petsc/src/ksp/ksp/impls/gmres/gmres.c
/petsc/src/ksp/ksp/impls/gmres/lgmres/lgmres.c
/petsc/src/ksp/ksp/impls/gmres/pgmres/pgmres.c
/petsc/src/ksp/ksp/impls/lsqr/lsqr.c
/petsc/src/ksp/ksp/impls/qcg/qcg.c
/petsc/src/ksp/ksp/impls/tfqmr/tfqmr.c
/petsc/src/ksp/ksp/interface/ams/kspams.c
/petsc/src/ksp/ksp/interface/ams/makefile
/petsc/src/ksp/ksp/interface/eige.c
/petsc/src/ksp/ksp/interface/itcl.c
/petsc/src/ksp/ksp/interface/itcreate.c
/petsc/src/ksp/ksp/interface/iterativ.c
/petsc/src/ksp/ksp/interface/itfunc.c
/petsc/src/ksp/ksp/utils/schurm.c
/petsc/src/ksp/pc/impls/asa/asa.c
/petsc/src/ksp/pc/impls/bddc/bddc.c
/petsc/src/ksp/pc/impls/bddc/bddc.h
/petsc/src/ksp/pc/impls/bddc/bddcfetidp.c
/petsc/src/ksp/pc/impls/bddc/bddcgraph.c
/petsc/src/ksp/pc/impls/bddc/bddcnullspace.c
/petsc/src/ksp/pc/impls/bddc/bddcprivate.c
/petsc/src/ksp/pc/impls/bddc/bddcprivate.h
/petsc/src/ksp/pc/impls/bddc/bddcscalingbasic.c
/petsc/src/ksp/pc/impls/bddc/bddcstructs.h
/petsc/src/ksp/pc/impls/factor/factimpl.c
/petsc/src/ksp/pc/impls/fieldsplit/fieldsplit.c
/petsc/src/ksp/pc/impls/gamg/gamg.c
/petsc/src/ksp/pc/impls/is/nn/nn.c
/petsc/src/ksp/pc/impls/is/pcis.c
/petsc/src/ksp/pc/impls/is/pcis.h
/petsc/src/ksp/pc/impls/ml/ml.c
/petsc/src/ksp/pc/interface/pcset.c
/petsc/src/ksp/pc/interface/precon.c
/petsc/src/mat/coarsen/coarsen.c
/petsc/src/mat/examples/tests/ex129.c
/petsc/src/mat/examples/tests/ex170.c
/petsc/src/mat/examples/tests/ex96.c
/petsc/src/mat/examples/tests/output/ex152_1.out
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/petsc/src/mat/examples/tests/output/ex170_0.out
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/petsc/src/mat/examples/tests/output/ex170_4.out
/petsc/src/mat/impls/aij/mpi/clique/clique.cxx
/petsc/src/mat/impls/aij/mpi/clique/matcliqueimpl.h
/petsc/src/mat/impls/aij/mpi/mpimattransposematmult.c
/petsc/src/mat/impls/aij/mpi/mpiov.c
/petsc/src/mat/impls/aij/mpi/mpiviennacl/mpiaijviennacl.cxx
/petsc/src/mat/impls/aij/mpi/mumps/mumps.c
/petsc/src/mat/impls/aij/mpi/pastix/pastix.c
/petsc/src/mat/impls/aij/seq/aij.c
/petsc/src/mat/impls/aij/seq/aij.h
/petsc/src/mat/impls/aij/seq/inode.c
/petsc/src/mat/impls/aij/seq/matmatmult.c
/petsc/src/mat/impls/aij/seq/matptap.c
/petsc/src/mat/impls/aij/seq/mattransposematmult.c
/petsc/src/mat/impls/aij/seq/seqviennacl/aijviennacl.cxx
/petsc/src/mat/impls/baij/mpi/mpb_baij.c
/petsc/src/mat/impls/baij/mpi/mpibaij.c
/petsc/src/mat/impls/mffd/mffd.c
/petsc/src/mat/interface/matrix.c
/petsc/src/mat/partition/partition.c
/petsc/src/mat/utils/axpy.c
/petsc/src/mat/utils/gcreate.c
/petsc/src/mat/utils/multequal.c
/petsc/src/snes/examples/tests/ex15.c
/petsc/src/snes/examples/tests/ex16.c
/petsc/src/snes/examples/tests/ex8.c
/petsc/src/snes/examples/tutorials/cahn-hilliard-schemes/ex1.c
/petsc/src/snes/examples/tutorials/ex10.c
/petsc/src/snes/examples/tutorials/ex12.c
/petsc/src/snes/examples/tutorials/ex14.c
/petsc/src/snes/examples/tutorials/ex15.c
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/petsc/src/snes/examples/tutorials/ex28.c
/petsc/src/snes/examples/tutorials/ex31.c
/petsc/src/snes/examples/tutorials/ex35.c
/petsc/src/snes/examples/tutorials/ex47cu.cu
/petsc/src/snes/examples/tutorials/ex48.c
/petsc/src/snes/examples/tutorials/ex52.c
/petsc/src/snes/examples/tutorials/ex54.c
/petsc/src/snes/examples/tutorials/ex55.c
/petsc/src/snes/examples/tutorials/ex58.c
/petsc/src/snes/examples/tutorials/ex5f90.F
/petsc/src/snes/examples/tutorials/ex5f90t.F
/petsc/src/snes/examples/tutorials/ex60.c
/petsc/src/snes/examples/tutorials/ex61.c
/petsc/src/snes/examples/tutorials/ex62.c
/petsc/src/snes/examples/tutorials/ex63.c
/petsc/src/snes/examples/tutorials/ex633d_db.c
/petsc/src/snes/examples/tutorials/ex64.c
/petsc/src/snes/examples/tutorials/ex65.c
/petsc/src/snes/examples/tutorials/ex653d.c
/petsc/src/snes/examples/tutorials/ex67.c
/petsc/src/snes/examples/tutorials/ex72.c
/petsc/src/snes/examples/tutorials/makefile
/petsc/src/snes/impls/composite/snescomposite.c
/petsc/src/snes/impls/fas/fas.c
/petsc/src/snes/impls/gs/snesgs.c
/petsc/src/snes/impls/ls/ls.c
/petsc/src/snes/impls/ms/ms.c
/petsc/src/snes/impls/multiblock/multiblock.c
/petsc/src/snes/impls/nasm/nasm.c
/petsc/src/snes/impls/ncg/snesncg.c
/petsc/src/snes/impls/ngmres/anderson.c
/petsc/src/snes/impls/ngmres/snesngmres.c
/petsc/src/snes/impls/qn/qn.c
/petsc/src/snes/impls/richardson/snesrichardson.c
/petsc/src/snes/impls/tr/tr.c
/petsc/src/snes/impls/vi/rs/virs.c
/petsc/src/snes/impls/vi/rsaug/virsaug.c
/petsc/src/snes/impls/vi/ss/viss.c
/petsc/src/snes/interface/snes.c
/petsc/src/snes/interface/snesj2.c
/petsc/src/snes/linesearch/impls/bt/linesearchbt.c
/petsc/src/snes/linesearch/impls/cp/linesearchcp.c
/petsc/src/snes/linesearch/interface/linesearch.c
/petsc/src/snes/mf/snesmfj.c
/petsc/src/snes/utils/dmdasnes.c
/petsc/src/snes/utils/dmlocalsnes.c
/petsc/src/snes/utils/dmplexsnes.c
/petsc/src/snes/utils/mesh/dmmeshsnes.c
/petsc/src/sys/ams/makefile
/petsc/src/sys/ams/pams.c
/petsc/src/sys/classes/bag/bag.c
/petsc/src/sys/classes/draw/impls/x/xinit.c
/petsc/src/sys/classes/draw/impls/x/xops.c
/petsc/src/sys/classes/draw/interface/draw.c
/petsc/src/sys/classes/draw/interface/drawreg.c
/petsc/src/sys/classes/random/interface/randomc.c
/petsc/src/sys/classes/viewer/impls/ams/ams.c
/petsc/src/sys/classes/viewer/impls/ams/amsopen.c
/petsc/src/sys/classes/viewer/impls/ams/makefile
/petsc/src/sys/classes/viewer/impls/binary/binv.c
/petsc/src/sys/classes/viewer/impls/draw/drawv.c
/petsc/src/sys/classes/viewer/impls/vtk/vtkv.c
/petsc/src/sys/classes/viewer/interface/view.c
/petsc/src/sys/classes/viewer/interface/viewreg.c
/petsc/src/sys/classes/viewer/interface/viewregall.c
/petsc/src/sys/error/pstack.c
/petsc/src/sys/examples/tutorials/ex11.c
/petsc/src/sys/examples/tutorials/makefile
/petsc/src/sys/logging/plog.c
/petsc/src/sys/objects/aoptions.c
/petsc/src/sys/objects/destroy.c
/petsc/src/sys/objects/inherit.c
/petsc/src/sys/objects/init.c
/petsc/src/sys/objects/olist.c
/petsc/src/sys/objects/options.c
/petsc/src/sys/objects/pinit.c
/petsc/src/sys/objects/pname.c
/petsc/src/sys/objects/ptype.c
/petsc/src/sys/objects/subcomm.c
/petsc/src/sys/threadcomm/interface/threadcomm.c
/petsc/src/sys/utils/pdisplay.c
/petsc/src/sys/utils/sortd.c
/petsc/src/sys/webserver/petscwebclient.c
/petsc/src/sys/webserver/webserve.c
/petsc/src/sys/yaml/yamlimpls.c
/petsc/src/ts/adapt/interface/tsadapt.c
/petsc/src/ts/examples/tests/ex25.c
/petsc/src/ts/examples/tests/ex5.c
/petsc/src/ts/examples/tutorials/advection-diffusion-reaction/ex5.c
/petsc/src/ts/examples/tutorials/advection-diffusion-reaction/ex7.c
/petsc/src/ts/examples/tutorials/ex10.c
/petsc/src/ts/examples/tutorials/ex11.c
/petsc/src/ts/examples/tutorials/ex13.c
/petsc/src/ts/examples/tutorials/ex14.c
/petsc/src/ts/examples/tutorials/ex15.c
/petsc/src/ts/examples/tutorials/ex17.c
/petsc/src/ts/examples/tutorials/ex22.c
/petsc/src/ts/examples/tutorials/ex22f.F
/petsc/src/ts/examples/tutorials/ex22f_mf.F90
/petsc/src/ts/examples/tutorials/ex23.c
/petsc/src/ts/examples/tutorials/ex25.c
/petsc/src/ts/examples/tutorials/ex8.c
/petsc/src/ts/examples/tutorials/ex9.c
/petsc/src/ts/examples/tutorials/makefile
/petsc/src/ts/examples/tutorials/phasefield/biharmonic.c
/petsc/src/ts/examples/tutorials/phasefield/biharmonic2.c
/petsc/src/ts/examples/tutorials/phasefield/biharmonic3.c
/petsc/src/ts/examples/tutorials/power_grid/ex6.c
explicit/ssp/ssp.c
implicit/gl/gl.c
implicit/gl/gladapt.c
/petsc/src/ts/interface/ts.c
/petsc/src/vec/is/ao/impls/basic/aobasic.c
/petsc/src/vec/is/ao/impls/mapping/aomapping.c
/petsc/src/vec/is/ao/impls/memscalable/aomemscalable.c
/petsc/src/vec/is/ao/interface/ao.c
/petsc/src/vec/is/sf/impls/basic/sfbasic.c
/petsc/src/vec/is/sf/interface/sf.c
/petsc/src/vec/is/utils/vsectionis.c
/petsc/src/vec/pf/interface/pf.c
/petsc/src/vec/vec/impls/mpi/mpiviennacl/mpiviennacl.cxx
/petsc/src/vec/vec/impls/mpi/pdvec.c
/petsc/src/vec/vec/impls/seq/bvec2.c
/petsc/src/vec/vec/impls/seq/seqcusp/veccusp.cu
/petsc/src/vec/vec/impls/seq/seqviennacl/vecviennacl.cxx
/petsc/src/vec/vec/interface/vector.c
/petsc/src/vec/vec/utils/vinv.c
/petsc/src/vec/vec/utils/vscat.c
/petsc/src/vec/vec/utils/vsection.c
/petsc/tutorials/HandsOnExercise.html
aa2d57e930-Aug-2013 Jed Brown <jedbrown@mcs.anl.gov>

Remove --with-dynamic-loading / PETSC_USE_DYNAMIC_LIBRARIES

This option was mostly redundant because normal shared libraries satisfy
all the same needs. This commit adds the run-time option
-dynami

Remove --with-dynamic-loading / PETSC_USE_DYNAMIC_LIBRARIES

This option was mostly redundant because normal shared libraries satisfy
all the same needs. This commit adds the run-time option
-dynamic_library_preload that can be used to load/initialize all the
packages in advance, as used to be done when --with-dynamic-loading.

The PetscDLLibraryRegister_petscxxx functions have been kept, but are
not called unless -dynamic_library_preload is used. The petsc-dev
discussion, "Why --with-dynamic-loading?" did not reach consensus about
whether this was ever useful, so it may also be removable.

show more ...


/petsc/bin/TOPSInstaller.py
/petsc/bin/maint/asterix-test.sh
/petsc/bin/maint/package-test.sh
/petsc/bin/maint/toclapack.sh
/petsc/bin/matlab/PetscReadBinaryMatlab.m
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arkimex/arkimex.c
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implicit/gl/gl.c
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9b92129417-Aug-2013 Barry Smith <bsmith@mcs.anl.gov>

Merge branch 'barry/improve-memory-logging'

Conflicts:
src/ksp/pc/impls/redundant/redundant.c
src/mat/interface/matnull.c


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2e698f8b18-Jun-2013 Debojyoti Ghosh <ghosh@mcs.anl.gov>

minor edits in rk and adding petsc math types in ex31


explicit/rk/rk.c
2109b73f11-Jun-2013 Debojyoti Ghosh <ghosh@mcs.anl.gov>

Added comments documenting the Dormand-Prince and Bogacki-Shampine RK methods...


explicit/rk/rk.c
d760c35b11-Jun-2013 Debojyoti Ghosh <ghosh@mcs.anl.gov>

Added a Boolean variable to indicate of method is FSAL


explicit/rk/rk.c
fdefd5e511-Jun-2013 Debojyoti Ghosh <ghosh@mcs.anl.gov>

Added Dormand-Prince and Bogacki-Shampine RK schemes...


/petsc/include/finclude/petsctsdef.h
/petsc/include/petscts.h
explicit/rk/rk.c
f68a32c824-May-2013 Emil Constantinescu <emconsta@mcs.anl.gov>

Implemented the renovated RK.
The first 6 commits are squashed and the text is preserved below.

modified the comment in rk.c

Copied arkimex.c to rk.c... will now start removing the implicit parts..

Implemented the renovated RK.
The first 6 commits are squashed and the text is preserved below.

modified the comment in rk.c

Copied arkimex.c to rk.c... will now start removing the implicit parts..

Renamed all ARKIMEX to RK in the variables... edited the structures representing the RK scheme...

Rough cut: removed all implicit stuff from ARKIMEX to get RK... have registered forward Euler, RK2 and RK3...

TSRK is *sort of* running... with probably some issues that need to be ironed out...

Added two more RK methods of orders 4 and 5, verified the rates of convergence for all the RK methods implemented...

show more ...


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9a6158bf19-Jun-2013 Jed Brown <jedbrown@mcs.anl.gov>

Merge branch 'barry/fix-PetscObjectPrintClassNamePrefixType'

* barry/fix-PetscObjectPrintClassNamePrefixType:
update tests of src/mat/examples/tests/ex136.c
Use classname in object for object na

Merge branch 'barry/fix-PetscObjectPrintClassNamePrefixType'

* barry/fix-PetscObjectPrintClassNamePrefixType:
update tests of src/mat/examples/tests/ex136.c
Use classname in object for object name when calling PetscObjectPrintClassNamePrefixType() instead of some string with less precise name passed in

Conflicts:
src/snes/interface/snes.c

show more ...


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/petsc/src/vec/vec/impls/mpi/pdvec.c
/petsc/src/vec/vec/impls/nest/vecnest.c
/petsc/src/vec/vec/impls/seq/bvec2.c
/petsc/src/vec/vec/impls/seq/makefile
/petsc/src/vec/vec/impls/seq/seqviennacl/makefile
/petsc/src/vec/vec/impls/seq/seqviennacl/vecviennacl.cxx
/petsc/src/vec/vec/impls/seq/seqviennacl/viennaclvecimpl.h
/petsc/src/vec/vec/interface/dlregisvec.c
/petsc/src/vec/vec/interface/rvector.c
/petsc/src/vec/vec/interface/vecregall.c
/petsc/src/vec/vec/interface/vector.c
/petsc/systems/Apple/OSX/bin/makedmg
/petsc/systems/Apple/OSX/examples/PETSc cocoa example/PETSc cocoa example/AppDelegate.m
/petsc/systems/Apple/OSX/examples/PETSc command line example/PETSc command line example/main.c
ec5563ed18-Jun-2013 Shri <abhyshr@mcs.anl.gov>

Update step completion status flags in TSStep_XXX when rolling back step.


/petsc/src/mat/examples/tests/makefile
/petsc/src/mat/impls/aij/seq/matptap.c
arkimex/arkimex.c
implicit/theta/theta.c
rosw/rosw.c
2465532817-Jun-2013 Shri <abhyshr@mcs.anl.gov>

TS: Rollback current step

Added TSRollBack() to rollback the current step. This feature is currently
available with arkimex, rosw, and theta methods. Tested on tutorials/ex8.c


/petsc/.mailmap
/petsc/bin/maint/builddist
/petsc/config/BuildSystem/config/packages/MOAB.py
/petsc/config/PETSc/packages/cuda.py
/petsc/config/PETSc/packages/opencl.py
/petsc/config/PETSc/packages/threadcomm.py
/petsc/config/PETSc/packages/viennacl.py
/petsc/config/PETSc/utilities/getResidentSetSize.py
/petsc/config/examples/arch-viennacl.py
/petsc/include/finclude/petscvecdef.h
/petsc/include/petsc-private/kspimpl.h
/petsc/include/petsc-private/matimpl.h
/petsc/include/petsc-private/petscimpl.h
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81d1268813-Jun-2013 Debojyoti Ghosh <ghosh@mcs.anl.gov>

Bugfix in TSExtrapolate_ARKIMEX used to calculate stage predictor-based initial guess...


arkimex/arkimex.c
c1758d9813-Jun-2013 Debojyoti Ghosh <ghosh@mcs.anl.gov>

Fixed a bug in TSInterpolate_ARKIMEX...


arkimex/arkimex.c
64b5d2f711-Jun-2013 Debojyoti Ghosh <ghosh@mcs.anl.gov>

Repositioned the saving of previous time-step stage values to after acceptance of time step


arkimex/arkimex.c
4859328509-Jun-2013 Debojyoti Ghosh <ghosh@mcs.anl.gov>

Bugfix: do not use extrapolated initial guess in the first time step


arkimex/arkimex.c
74cd440c06-Jun-2013 Debojyoti Ghosh <ghosh@mcs.anl.gov>

Adding extrapolated initial guess to ARKIMEX - part 2


arkimex/arkimex.c
56dcabba05-Jun-2013 Debojyoti Ghosh <ghosh@mcs.anl.gov>

Adding extrapolated initial guess to ARKIMEX - part 1


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34497c8d27-May-2013 Jed Brown <jedbrown@mcs.anl.gov>

Cannot use PETSC_COMM_WORLD in library code


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3bb1ff4028-May-2013 Barry Smith <bsmith@mcs.anl.gov>

logging memory now credits to all ancestors


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dae5874822-May-2013 Barry Smith <bsmith@mcs.anl.gov>

Use classname in object for object name when calling PetscObjectPrintClassNamePrefixType() instead of some string with less precise name passed in


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7619abb313-May-2013 Shri <abhyshr@mcs.anl.gov>

Modified interface for TS error norm calculation.

Renamed TSErrorNormWRMS to TSErrorWeightedNorm.
Implemented infinite weighted norm calculation.
Added option -ts_adapt_wnormtype to set the type of

Modified interface for TS error norm calculation.

Renamed TSErrorNormWRMS to TSErrorWeightedNorm.
Implemented infinite weighted norm calculation.
Added option -ts_adapt_wnormtype to set the type of norm computed.

show more ...


/petsc/bin/maint/buildtest
/petsc/bin/maint/confignightly/bb4
/petsc/bin/maint/confignightly/ps3-2
/petsc/bin/maint/copylognightly
/petsc/bin/maint/xclude
/petsc/conf/test
/petsc/config/BuildSystem/config/package.py
/petsc/config/BuildSystem/config/packages/BlasLapack.py
/petsc/config/BuildSystem/config/packages/MPI.py
/petsc/config/BuildSystem/config/packages/hdf5.py
/petsc/config/BuildSystem/config/setCompilers.py
/petsc/config/PETSc/packages/ams.py
/petsc/config/PETSc/packages/txpetscgpu.py
/petsc/config/examples/arch-mswin-cxx-cmplx.py
/petsc/config/examples/arch-viennacl.py
/petsc/include/finclude/ftn-custom/makefile
/petsc/include/finclude/petscpcdef.h
/petsc/include/finclude/petscsnesdef.h
/petsc/include/finclude/petscviewerdef.h
/petsc/include/petsc-private/petscimpl.h
/petsc/include/petsc-private/tsimpl.h
/petsc/include/petscbt.h
/petsc/include/petscpc.h
/petsc/include/petscsys.h
/petsc/include/petscts.h
/petsc/interfaces/lua/src/makefile
/petsc/interfaces/makefile
/petsc/setup.py
/petsc/src/dm/impls/adda/examples/makefile
/petsc/src/dm/impls/adda/examples/tests/makefile
/petsc/src/dm/impls/adda/makefile
/petsc/src/dm/impls/da/f90-custom/makefile
/petsc/src/dm/impls/da/usfft/makefile
/petsc/src/dm/impls/makefile
/petsc/src/dm/impls/mesh/examples/tests/makefile
/petsc/src/dm/impls/mesh/examples/tutorials/makefile
/petsc/src/dm/impls/moab/examples/tests/makefile
/petsc/src/dm/impls/redundant/makefile
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/petsc/src/dm/impls/sliced/makefile
/petsc/src/docs/doxygen/manual/user/acknowl.h
/petsc/src/docs/tex/manual/acknowl.tex
/petsc/src/docs/tex/manual/part2.tex
/petsc/src/docs/website/developers/index.html
/petsc/src/docs/website/documentation/faq.html
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/petsc/src/ksp/ksp/examples/tests/output/ex43-aijcusparse_2.out
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/petsc/src/ksp/ksp/impls/bcgs/fbcgs/makefile
/petsc/src/ksp/ksp/impls/bcgs/fbcgsr/makefile
/petsc/src/ksp/ksp/impls/gmres/agmres/makefile
/petsc/src/ksp/ksp/interface/dlregisksp.c
/petsc/src/ksp/ksp/interface/eige.c
/petsc/src/ksp/pc/impls/ainvcusp/ainvcusp.cu
/petsc/src/ksp/pc/impls/gamg/gamg.c
/petsc/src/ksp/pc/impls/gamg/gamg.h
/petsc/src/mat/examples/tests/ex125.c
/petsc/src/mat/impls/aij/mpi/mpicusp/makefile
/petsc/src/mat/impls/aij/mpi/mpicusparse/makefile
/petsc/src/mat/impls/aij/seq/seqcusparse/aijcusparse.cu
/petsc/src/mat/impls/aij/seq/seqcusparse/cusparsematimpl.h
/petsc/src/mat/impls/cufft/makefile
/petsc/src/mat/impls/fft/fftw/ftn-custom/makefile
/petsc/src/snes/examples/tutorials/cahn-hilliard-schemes/makefile
/petsc/src/snes/examples/tutorials/ex30.c
/petsc/src/snes/examples/tutorials/ex7.c
/petsc/src/snes/impls/gs/makefile
/petsc/src/snes/impls/ms/makefile
/petsc/src/snes/impls/qn/makefile
/petsc/src/snes/impls/vi/rs/makefile
/petsc/src/snes/impls/vi/rsaug/makefile
/petsc/src/snes/impls/vi/ss/makefile
/petsc/src/snes/interface/snes.c
/petsc/src/snes/linesearch/impls/makefile
/petsc/src/sys/ams/java/makefile
/petsc/src/sys/classes/bag/makefile
/petsc/src/sys/classes/makefile
/petsc/src/sys/classes/random/examples/makefile
/petsc/src/sys/classes/random/examples/tutorials/makefile
/petsc/src/sys/classes/random/impls/makefile
/petsc/src/sys/classes/random/impls/rand/makefile
/petsc/src/sys/classes/random/impls/rand48/makefile
/petsc/src/sys/classes/random/impls/sprng/makefile
/petsc/src/sys/classes/random/interface/ftn-custom/makefile
/petsc/src/sys/classes/random/interface/makefile
/petsc/src/sys/classes/random/makefile
/petsc/src/sys/classes/viewer/examples/makefile
/petsc/src/sys/classes/viewer/impls/matlab/makefile
/petsc/src/sys/classes/viewer/impls/socket/matlab/makefile
/petsc/src/sys/error/checkptr.c
/petsc/src/sys/error/makefile
/petsc/src/sys/error/signal.c
/petsc/src/sys/info/ftn-custom/makefile
/petsc/src/sys/info/makefile
/petsc/src/sys/logging/ftn-custom/makefile
/petsc/src/sys/logging/makefile
/petsc/src/sys/logging/utils/makefile
/petsc/src/sys/objects/f2003-src/fsrc/makefile
/petsc/src/sys/objects/f2003-src/makefile
/petsc/src/sys/objects/ftn-custom/zstart.c
/petsc/src/sys/threadcomm/interface/dlregisthreadcomm.c
/petsc/src/sys/threadcomm/interface/makefile
/petsc/src/sys/threadcomm/interface/threadcomm.c
/petsc/src/sys/threadcomm/makefile
/petsc/src/sys/webserver/makefile
/petsc/src/ts/adapt/impls/basic/adaptbasic.c
/petsc/src/ts/adapt/interface/tsadapt.c
/petsc/src/ts/examples/tests/ex25.c
/petsc/src/ts/examples/tests/makefile
/petsc/src/ts/examples/tests/output/ex25_1.out
/petsc/src/ts/examples/tests/output/ex25_2.out
/petsc/src/ts/examples/tutorials/advection-diffusion-reaction/makefile
/petsc/src/ts/examples/tutorials/ex25.c
/petsc/src/ts/examples/tutorials/ex30.cxx
/petsc/src/ts/examples/tutorials/ex9.c
/petsc/src/ts/examples/tutorials/makefile
/petsc/src/ts/examples/tutorials/output/ex30_1.out
/petsc/src/ts/examples/tutorials/output/ex30_2.out
/petsc/src/ts/examples/tutorials/phasefield/makefile
/petsc/src/ts/examples/tutorials/power_grid/makefile
/petsc/src/ts/examples/tutorials/power_grid/stability_9bus/makefile
eimex/eimex.c
/petsc/src/ts/interface/ts.c
/petsc/src/vec/is/ao/impls/basic/ftn-custom/makefile
/petsc/src/vec/is/ao/impls/basic/ftn-custom/zaobasicf.c
/petsc/src/vec/is/ao/impls/basic/makefile
/petsc/src/vec/is/ao/impls/makefile
/petsc/src/vec/is/ao/impls/mapping/ftn-custom/makefile
/petsc/src/vec/is/ao/impls/mapping/makefile
/petsc/src/vec/is/ao/impls/memscalable/makefile
/petsc/src/vec/is/ao/interface/ftn-custom/makefile
/petsc/src/vec/is/ao/interface/makefile
/petsc/src/vec/is/ao/makefile
/petsc/src/vec/is/is/interface/makefile
/petsc/src/vec/is/is/makefile
/petsc/src/vec/is/makefile
/petsc/src/vec/vec/impls/mpi/mpicusp/makefile
/petsc/src/vec/vec/impls/nest/ftn-custom/makefile
/petsc/src/vec/vec/impls/seq/seqcusp/veccusp.cu
/petsc/src/vec/vec/utils/veccusp/makefile
/petsc/src/vec/vec/utils/veccusp/vscatcusp.c
/petsc/src/vec/vec/utils/vinv.c
8b83055f05-May-2013 Jed Brown <jedbrown@mcs.anl.gov>

PetscStackCallBLAS: new macro instead of PetscStackCall (skip CHKMEMQ)

When CHKMEMQ occurs on every call to BLAS or Lapack, we sometimes see
unacceptable performance degradation (orders of magnitude

PetscStackCallBLAS: new macro instead of PetscStackCall (skip CHKMEMQ)

When CHKMEMQ occurs on every call to BLAS or Lapack, we sometimes see
unacceptable performance degradation (orders of magnitude).
PetscStackCallBLAS is currently identical to PetscStackCall except for
skipping CHKMEMQ, but such checking could be made optional in the
future.

show more ...


/petsc/config/BuildSystem/config/package.py
/petsc/config/BuildSystem/config/packages/BlasLapack.py
/petsc/config/BuildSystem/config/packages/MPI.py
/petsc/config/BuildSystem/config/packages/hdf5.py
/petsc/config/BuildSystem/config/setCompilers.py
/petsc/config/PETSc/FEM.py
/petsc/config/PETSc/packages/Chaco.py
/petsc/config/PETSc/packages/elemental.py
/petsc/config/PETSc/utilities/Regression.py
/petsc/config/builder.py
/petsc/config/builder2.py
/petsc/include/finclude/petscviewerdef.h
/petsc/include/mpiuni/mpi.h
/petsc/include/petsc-private/kernels/blockinvert.h
/petsc/include/petsc-private/kernels/petscaxpy.h
/petsc/include/petscblaslapack.h
/petsc/include/petscdm.h
/petsc/include/petscerror.h
/petsc/include/petscpc.h
/petsc/include/petscsf.h
/petsc/include/petscsnes.h
/petsc/include/petscsys.h
/petsc/src/contrib/fun3d/comp/flow.c
/petsc/src/contrib/fun3d/comp/user.F
/petsc/src/contrib/fun3d/comp/user.h
/petsc/src/contrib/fun3d/comp/userJac.F
/petsc/src/contrib/fun3d/incomp/flow.c
/petsc/src/contrib/fun3d/incomp/makefile
/petsc/src/contrib/fun3d/incomp/user.F
/petsc/src/dm/dt/interface/dt.c
/petsc/src/dm/impls/composite/packm.c
/petsc/src/dm/impls/da/hypre/mhyp.c
/petsc/src/dm/impls/plex/plexvtu.c
/petsc/src/dm/impls/shell/dmshell.c
/petsc/src/dm/interface/dm.c
/petsc/src/docs/tex/manual/part2.tex
/petsc/src/docs/tex/petsc.bib
/petsc/src/docs/tex/petscapp.bib
/petsc/src/docs/website/developers/index.html
/petsc/src/docs/website/documentation/changes/dev.html
/petsc/src/docs/website/documentation/faq.html
/petsc/src/docs/website/download/index.html
/petsc/src/ksp/ksp/examples/tests/ex25.c
/petsc/src/ksp/ksp/examples/tests/ex27.c
/petsc/src/ksp/ksp/examples/tests/ex42.c
/petsc/src/ksp/ksp/examples/tests/makefile
/petsc/src/ksp/ksp/examples/tutorials/makefile
/petsc/src/ksp/ksp/impls/bcgsl/bcgsl.c
/petsc/src/ksp/ksp/impls/cg/gltr/gltr.c
/petsc/src/ksp/ksp/impls/gmres/agmres/agmres.c
/petsc/src/ksp/ksp/impls/gmres/agmres/agmresdeflation.c
/petsc/src/ksp/ksp/impls/gmres/agmres/agmresorthog.c
/petsc/src/ksp/ksp/impls/gmres/dgmres/dgmres.c
/petsc/src/ksp/ksp/impls/gmres/gmreig.c
/petsc/src/ksp/ksp/interface/dlregisksp.c
/petsc/src/ksp/ksp/interface/eige.c
/petsc/src/ksp/pc/impls/asa/asa.c
/petsc/src/ksp/pc/impls/bddc/bddc.c
/petsc/src/ksp/pc/impls/gamg/agg.c
/petsc/src/ksp/pc/impls/gamg/gamg.c
/petsc/src/ksp/pc/impls/gamg/gamg.h
/petsc/src/ksp/pc/impls/gamg/geo.c
/petsc/src/ksp/pc/impls/mg/mg.c
/petsc/src/ksp/pc/impls/shell/shellpc.c
/petsc/src/ksp/pc/impls/svd/svd.c
/petsc/src/ksp/pc/impls/tfs/gs.c
/petsc/src/ksp/pc/impls/tfs/xxt.c
/petsc/src/ksp/pc/impls/tfs/xyt.c
/petsc/src/ksp/pc/interface/precon.c
/petsc/src/mat/color/color.c
/petsc/src/mat/examples/tests/ex125.c
/petsc/src/mat/examples/tests/ex22.c
/petsc/src/mat/examples/tutorials/makefile
/petsc/src/mat/impls/aij/mpi/mpiaij.c
/petsc/src/mat/impls/aij/mpi/mpimatmatmult.c
/petsc/src/mat/impls/aij/mpi/mpiptap.c
/petsc/src/mat/impls/aij/seq/aij.c
/petsc/src/mat/impls/aij/seq/matmatmult.c
/petsc/src/mat/impls/aij/seq/matptap.c
/petsc/src/mat/impls/baij/mpi/bstream/mpibstream.c
/petsc/src/mat/impls/baij/mpi/mpibaij.c
/petsc/src/mat/impls/baij/seq/baij.c
/petsc/src/mat/impls/baij/seq/baij2.c
/petsc/src/mat/impls/dense/mpi/mmdense.c
/petsc/src/mat/impls/dense/seq/dense.c
/petsc/src/mat/impls/elemental/matelem.cxx
/petsc/src/mat/impls/maij/maij.c
/petsc/src/mat/impls/sbaij/mpi/mpisbaij.c
/petsc/src/mat/impls/sbaij/mpi/sbstream/mpisbstream.c
/petsc/src/mat/impls/sbaij/seq/sbaij.c
/petsc/src/mat/impls/sbaij/seq/sbaij2.c
/petsc/src/mat/interface/matrix.c
/petsc/src/mat/order/amd/amd.c
/petsc/src/mat/order/sorder.c
/petsc/src/mat/order/sp1wd.c
/petsc/src/mat/order/spnd.c
/petsc/src/mat/order/spqmd.c
/petsc/src/mat/order/sprcm.c
/petsc/src/snes/examples/tutorials/ex15.c
/petsc/src/snes/examples/tutorials/ex19.c
/petsc/src/snes/examples/tutorials/ex1f.F
/petsc/src/snes/examples/tutorials/ex3.c
/petsc/src/snes/examples/tutorials/ex30.c
/petsc/src/snes/examples/tutorials/ex7.c
/petsc/src/snes/examples/tutorials/makefile
/petsc/src/snes/examples/tutorials/output/ex15_4.out
/petsc/src/snes/impls/fas/fas.c
/petsc/src/snes/impls/ls/ls.c
/petsc/src/snes/impls/nasm/aspin.c
/petsc/src/snes/impls/ncg/snesncg.c
/petsc/src/snes/impls/ngmres/anderson.c
/petsc/src/snes/impls/ngmres/ngmresfunc.c
/petsc/src/snes/impls/ngmres/snesngmres.c
/petsc/src/snes/impls/qn/qn.c
/petsc/src/snes/impls/richardson/snesrichardson.c
/petsc/src/snes/impls/vi/rs/virs.c
/petsc/src/snes/impls/vi/ss/viss.c
/petsc/src/snes/impls/vi/vi.c
/petsc/src/snes/interface/ftn-custom/zsnesf.c
/petsc/src/snes/interface/snes.c
/petsc/src/snes/interface/snesut.c
/petsc/src/snes/linesearch/impls/shell/linesearchshell.c
/petsc/src/snes/linesearch/interface/linesearch.c
/petsc/src/sys/classes/viewer/examples/tests/ex3.c
/petsc/src/sys/objects/ftn-custom/zstart.c
/petsc/src/sys/utils/str.c
/petsc/src/ts/examples/tutorials/ex11.c
/petsc/src/ts/examples/tutorials/ex22.c
/petsc/src/ts/examples/tutorials/ex22f.F
/petsc/src/ts/examples/tutorials/ex27.c
/petsc/src/ts/examples/tutorials/ex9.c
implicit/gl/gl.c
/petsc/src/vec/is/sf/impls/basic/sfbasic.c
/petsc/src/vec/is/sf/impls/window/makefile
/petsc/src/vec/is/sf/interface/sf.c
/petsc/src/vec/is/sf/interface/sftype.c
/petsc/src/vec/vec/impls/seq/bvec1.c
/petsc/src/vec/vec/impls/seq/bvec2.c
/petsc/src/vec/vec/interface/vector.c
/petsc/src/vec/vec/utils/vecio.c
552698da16-Apr-2013 Jed Brown <jed@59A2.org>

TSGetAdapt: restore name from TSGetTSAdapt

This function was called TSGetAdapt in petsc-3.3 and was changed to
TSGetTSAdapt in:

commit ad6bc4219076b084d4a49a29c04a77944f238f10
Author: Barry Smi

TSGetAdapt: restore name from TSGetTSAdapt

This function was called TSGetAdapt in petsc-3.3 and was changed to
TSGetTSAdapt in:

commit ad6bc4219076b084d4a49a29c04a77944f238f10
Author: Barry Smith <bsmith@mcs.anl.gov>
Date: Sun Dec 9 18:14:24 2012 -0600

My first TS restart just 8 million other changes needed PETSc!
TSGetAdapt() changed to TSGetTSAdapt() because it gets a TSAdapt object, not an Adapt object
added TSAdapt binary view and load

This rationale does not match the more established convention used by
functions such as the following.

MatGetInfo
MatGetColoring
MatGetNullSpace
MatGetLocalToGlobalMapping
MatGetLocalToGlobalMappingBlock (31 characters)
SNESGetConvergedReason

show more ...


/petsc/bin/maint/buildtest
/petsc/bin/maint/confignightly/bb4
/petsc/bin/maint/confignightly/ps3-2
/petsc/bin/maint/copylognightly
/petsc/bin/maint/xclude
/petsc/conf/test
/petsc/config/BuildSystem/config/package.py
/petsc/config/PETSc/packages/ams.py
/petsc/config/PETSc/packages/txpetscgpu.py
/petsc/config/examples/arch-mswin-cxx-cmplx.py
/petsc/config/examples/arch-viennacl.py
/petsc/include/finclude/ftn-custom/makefile
/petsc/include/finclude/petscpcdef.h
/petsc/include/finclude/petscsnesdef.h
/petsc/include/petsc-private/petscimpl.h
/petsc/include/petscbt.h
/petsc/include/petscpc.h
/petsc/include/petscts.h
/petsc/interfaces/lua/src/makefile
/petsc/interfaces/makefile
/petsc/setup.py
/petsc/src/dm/impls/adda/examples/makefile
/petsc/src/dm/impls/adda/examples/tests/makefile
/petsc/src/dm/impls/adda/makefile
/petsc/src/dm/impls/da/f90-custom/makefile
/petsc/src/dm/impls/da/usfft/makefile
/petsc/src/dm/impls/makefile
/petsc/src/dm/impls/mesh/examples/tests/makefile
/petsc/src/dm/impls/mesh/examples/tutorials/makefile
/petsc/src/dm/impls/moab/examples/tests/makefile
/petsc/src/dm/impls/redundant/makefile
/petsc/src/dm/impls/shell/makefile
/petsc/src/dm/impls/sliced/makefile
/petsc/src/docs/doxygen/manual/user/acknowl.h
/petsc/src/docs/tex/manual/acknowl.tex
/petsc/src/docs/tex/manual/part2.tex
/petsc/src/docs/website/developers/index.html
/petsc/src/docs/website/documentation/faq.html
/petsc/src/docs/website/download/index.html
/petsc/src/docs/website/miscellaneous/external.html
/petsc/src/ksp/ksp/examples/tests/ex43-aijcusparse.c
/petsc/src/ksp/ksp/examples/tests/makefile
/petsc/src/ksp/ksp/examples/tests/output/ex43-aijcusparse.out
/petsc/src/ksp/ksp/examples/tests/output/ex43-aijcusparse_2.out
/petsc/src/ksp/ksp/examples/tutorials/makefile
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/petsc/src/ksp/ksp/impls/bcgs/fbcgs/makefile
/petsc/src/ksp/ksp/impls/bcgs/fbcgsr/makefile
/petsc/src/ksp/ksp/impls/gmres/agmres/makefile
/petsc/src/ksp/pc/impls/ainvcusp/ainvcusp.cu
/petsc/src/ksp/pc/impls/gamg/gamg.c
/petsc/src/ksp/pc/impls/gamg/gamg.h
/petsc/src/mat/impls/aij/mpi/mpicusp/makefile
/petsc/src/mat/impls/aij/mpi/mpicusparse/makefile
/petsc/src/mat/impls/aij/seq/seqcusparse/aijcusparse.cu
/petsc/src/mat/impls/aij/seq/seqcusparse/cusparsematimpl.h
/petsc/src/mat/impls/cufft/makefile
/petsc/src/mat/impls/fft/fftw/ftn-custom/makefile
/petsc/src/snes/examples/tutorials/cahn-hilliard-schemes/makefile
/petsc/src/snes/impls/gs/makefile
/petsc/src/snes/impls/ms/makefile
/petsc/src/snes/impls/qn/makefile
/petsc/src/snes/impls/vi/rs/makefile
/petsc/src/snes/impls/vi/rsaug/makefile
/petsc/src/snes/impls/vi/ss/makefile
/petsc/src/snes/linesearch/impls/makefile
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/petsc/src/sys/classes/bag/makefile
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/petsc/src/sys/classes/random/examples/makefile
/petsc/src/sys/classes/random/examples/tutorials/makefile
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/petsc/src/sys/classes/random/impls/rand/makefile
/petsc/src/sys/classes/random/impls/rand48/makefile
/petsc/src/sys/classes/random/impls/sprng/makefile
/petsc/src/sys/classes/random/interface/ftn-custom/makefile
/petsc/src/sys/classes/random/interface/makefile
/petsc/src/sys/classes/random/makefile
/petsc/src/sys/classes/viewer/examples/makefile
/petsc/src/sys/classes/viewer/impls/matlab/makefile
/petsc/src/sys/classes/viewer/impls/socket/matlab/makefile
/petsc/src/sys/error/checkptr.c
/petsc/src/sys/error/makefile
/petsc/src/sys/error/signal.c
/petsc/src/sys/info/ftn-custom/makefile
/petsc/src/sys/info/makefile
/petsc/src/sys/logging/ftn-custom/makefile
/petsc/src/sys/logging/makefile
/petsc/src/sys/logging/utils/makefile
/petsc/src/sys/objects/f2003-src/fsrc/makefile
/petsc/src/sys/objects/f2003-src/makefile
/petsc/src/sys/threadcomm/interface/dlregisthreadcomm.c
/petsc/src/sys/threadcomm/interface/makefile
/petsc/src/sys/threadcomm/interface/threadcomm.c
/petsc/src/sys/threadcomm/makefile
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