Add support for doing a line graph plot of TS solutions on Networks.

Each vertex and edge gets its own window that plots all the solutions for the point

Commit-type: feature
Funded-by: ECP
Project:

Add support for doing a line graph plot of TS solutions on Networks.

Each vertex and edge gets its own window that plots all the solutions for the point

Commit-type: feature
Funded-by: ECP
Project: Epidemic
/spend 4h

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Improve the error handling and documentation for -snes_lag_jacobian and -snes_lag_preconditioner

Add specific documentation for ROSW.

Commit-type: error-checking, bug-fix, testing-fix, documentatio

Improve the error handling and documentation for -snes_lag_jacobian and -snes_lag_preconditioner

Add specific documentation for ROSW.

Commit-type: error-checking, bug-fix, testing-fix, documentation
/spend 1h
Reported-by: Emil Constantinescu M <emconsta@anl.gov>

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Turn on checkbadSource test to generate an error when found; fix all source code that causes errors

Commit-type: portability-fix, testing-fix, style-fix, feature, maintainability
/spend 1.5h

Add support for TSExactFinalTimeOption default if method has adaptor or no

Cleanup a bunch of TS test examples, add two unfinished test examples

Commit-type: feature, examples

/spend 1h

Add calling sequence for function provided to TSSetTransientVariable
Fix other TS manual pages

Commit-type: documentation
/spend 10m
Reported-by: Kyle B. Thompson <kyle.b.thompson@nasa.gov>

ConvEst: Now use -ts_convergence_temporal 0 to check spatial convergence of a TS model
- Added argument to PetscConvEstUseTS()

Merge remote-tracking branch 'origin/maint'

Remove MatMissingDiagonal checks from TS

They were there originally because shifting a matrix could be very slow annouying users.

Issue #542

Commit-type: optimization
Time: .1 hours
Reported-by

Remove MatMissingDiagonal checks from TS

They were there originally because shifting a matrix could be very slow annouying users.

Issue #542

Commit-type: optimization
Time: .1 hours
Reported-by: Ivan Yashchuk

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TSComputeRHSJacobian() incorrectly used function context not Jacobian context

Commit-type: bug-fix
Time: .1 hours
Reported-by: Matt Otten <motten@anl.gov>

Updated the use of sizeof() when possible instead of using hardwired sizes for functions whose string arguments
need sizes. In particular done for PetscOptionsGetString(), PetscOptionsString(), and a

Updated the use of sizeof() when possible instead of using hardwired sizes for functions whose string arguments
need sizes. In particular done for PetscOptionsGetString(), PetscOptionsString(), and a few other utilities

Commit-type: style-fix

Development Tools: Vim, Emacs, Eclipse

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Merge remote-tracking branch 'origin/maint'

Fix DM issues in SplitTS

- Revert the commit feb1c02f. It causes the multirate ODE examples to fail. In addition, this commit seems unnecessary since the subts DM is set up in TSMPRKSetSplits() for

Fix DM issues in SplitTS

- Revert the commit feb1c02f. It causes the multirate ODE examples to fail. In addition, this commit seems unnecessary since the subts DM is set up in TSMPRKSetSplits() for MPRK and in TSSetUp_RK_MultirateSplit() for MRK.
- Clean up serveral multirate examples and add them to tests.

Commit-type: bug-fix
Reported by: Aidan Hamilton <aidan@udel.edu>

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Update ts citations

Merge remote-tracking branch 'origin/maint'

Fix mismatched step index in adjoint

The step index is increased after TSStep(), so it should be decreased before TSAdjointStep() for consistency.

Funded-by:
Project: FASTMath adjoint
Time:
Reporte

Fix mismatched step index in adjoint

The step index is increased after TSStep(), so it should be decreased before TSAdjointStep() for consistency.

Funded-by:
Project: FASTMath adjoint
Time:
Reported-by: Satish Balay <balay@mcs.anl.gov>
Thanks-to:

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Merge remote-tracking branch 'origin/maint'