History log of /petsc/src/ts/interface/ (Results 851 – 875 of 1476)
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aa2d57e930-Aug-2013 Jed Brown <jedbrown@mcs.anl.gov>

Remove --with-dynamic-loading / PETSC_USE_DYNAMIC_LIBRARIES

This option was mostly redundant because normal shared libraries satisfy
all the same needs. This commit adds the run-time option
-dynami

Remove --with-dynamic-loading / PETSC_USE_DYNAMIC_LIBRARIES

This option was mostly redundant because normal shared libraries satisfy
all the same needs. This commit adds the run-time option
-dynamic_library_preload that can be used to load/initialize all the
packages in advance, as used to be done when --with-dynamic-loading.

The PetscDLLibraryRegister_petscxxx functions have been kept, but are
not called unless -dynamic_library_preload is used. The petsc-dev
discussion, "Why --with-dynamic-loading?" did not reach consensus about
whether this was ever useful, so it may also be removable.

show more ...


/petsc/bin/TOPSInstaller.py
/petsc/bin/maint/asterix-test.sh
/petsc/bin/maint/package-test.sh
/petsc/bin/maint/toclapack.sh
/petsc/bin/matlab/PetscReadBinaryMatlab.m
/petsc/config/BuildSystem/config/package.py
/petsc/config/BuildSystem/config/packages/BlasLapack.py
/petsc/config/BuildSystem/config/packages/f2cblaslapack.py
/petsc/config/BuildSystem/config/packages/hdf5.py
/petsc/config/BuildSystem/config/setCompilers.py
/petsc/config/PETSc/packages/metis.py
/petsc/config/PETSc/packages/openmp.py
/petsc/config/PETSc/packages/pARMS.py
/petsc/config/PETSc/packages/parmetis.py
/petsc/config/PETSc/packages/scalapack.py
/petsc/config/PETSc/packages/valgrind.py
/petsc/config/PETSc/utilities/sharedLibraries.py
/petsc/config/builder.py
/petsc/config/cmakeboot.py
/petsc/config/examples/arch-c-exodus-dbg-builder.py
/petsc/config/examples/arch-linux-gcc-real-opt.py
/petsc/config/examples/arch-linux-gcc-real.py
/petsc/config/examples/arch-linux-gxx-complex.py
/petsc/config/examples/basic/arch-gcc-complex-O.py
/petsc/config/examples/basic/arch-gcc-complex.py
/petsc/config/examples/basic/arch-gcc-real-O.py
/petsc/config/examples/basic/arch-gcc-real.py
/petsc/config/examples/basic/arch-gcc64-complex-O.py
/petsc/config/examples/basic/arch-gcc64-complex.py
/petsc/config/examples/basic/arch-gcc64-real-O.py
/petsc/config/examples/basic/arch-gcc64-real.py
/petsc/config/examples/basic/arch-gxx-complex-O.py
/petsc/config/examples/basic/arch-gxx-complex.py
/petsc/config/examples/basic/arch-gxx-real-O.py
/petsc/config/examples/basic/arch-gxx-real.py
/petsc/config/examples/basic/arch-gxx64-complex-O.py
/petsc/config/examples/basic/arch-gxx64-complex.py
/petsc/config/examples/basic/arch-gxx64-real-O.py
/petsc/config/examples/basic/arch-gxx64-real.py
/petsc/include/finclude/petscviewer.h
/petsc/include/petsc-private/dmimpl.h
/petsc/include/petscao.h
/petsc/include/petscdm.h
/petsc/include/petscdmplex.h
/petsc/include/petscpc.h
/petsc/include/petscsys.h
/petsc/include/petscvec.h
/petsc/include/petscviewer.h
/petsc/share/petsc/datafiles/meshes/annulus-20.exo
/petsc/share/petsc/datafiles/meshes/simpleblock-100.exo
/petsc/src/benchmarks/benchmarkExample.py
/petsc/src/dm/examples/tests/ex42.c
/petsc/src/dm/examples/tests/makefile
/petsc/src/dm/impls/composite/pack.c
/petsc/src/dm/impls/da/da2.c
/petsc/src/dm/impls/da/dacreate.c
/petsc/src/dm/impls/da/fdda.c
/petsc/src/dm/impls/da/gr2.c
/petsc/src/dm/impls/da/grvtk.c
/petsc/src/dm/impls/mesh/mesh.c
/petsc/src/dm/impls/plex/examples/tests/ex7.c
/petsc/src/dm/impls/plex/examples/tests/ex8.c
/petsc/src/dm/impls/plex/examples/tests/output/ex8_0.out
/petsc/src/dm/impls/plex/examples/tests/output/ex8_1.out
/petsc/src/dm/impls/plex/examples/tests/output/ex8_2.out
/petsc/src/dm/impls/plex/examples/tests/output/ex8_3.out
/petsc/src/dm/impls/plex/examples/tests/output/ex8_4.out
/petsc/src/dm/impls/plex/examples/tests/output/ex8_5.out
/petsc/src/dm/impls/plex/plex.c
/petsc/src/dm/impls/plex/plexcreate.c
/petsc/src/dm/impls/plex/plexexodusii.c
/petsc/src/dm/impls/plex/plexgeometry.c
/petsc/src/dm/impls/plex/plexsubmesh.c
/petsc/src/dm/impls/plex/plexvtk.c
/petsc/src/dm/impls/plex/plexvtu.c
/petsc/src/dm/interface/dlregisdmdm.c
/petsc/src/dm/interface/dm.c
/petsc/src/dm/interface/dmi.c
/petsc/src/docs/manualpages-sec/header_PetscSF
/petsc/src/docs/tex/manual/part2.tex
/petsc/src/docs/tex/petsc.bib
/petsc/src/docs/tex/petscapp.bib
/petsc/src/docs/website/documentation/changes/dev.html
/petsc/src/docs/website/documentation/faq.html
/petsc/src/docs/website/documentation/index.html
/petsc/src/ksp/ksp/examples/tests/ex21.c
/petsc/src/ksp/ksp/impls/cheby/cheby.c
/petsc/src/ksp/ksp/impls/gmres/agmres/agmresleja.c
/petsc/src/ksp/ksp/impls/gmres/dgmres/dgmres.c
/petsc/src/ksp/ksp/impls/gmres/dgmres/dgmresimpl.h
/petsc/src/ksp/ksp/interface/ams/kspams.c
/petsc/src/ksp/ksp/interface/dlregisksp.c
/petsc/src/ksp/ksp/interface/dmksp.c
/petsc/src/ksp/ksp/interface/eige.c
/petsc/src/ksp/ksp/interface/itcreate.c
/petsc/src/ksp/ksp/interface/iterativ.c
/petsc/src/ksp/ksp/interface/itfunc.c
/petsc/src/ksp/ksp/utils/schurm.c
/petsc/src/ksp/pc/impls/bddc/bddc.c
/petsc/src/ksp/pc/impls/bddc/bddc.h
/petsc/src/ksp/pc/impls/bddc/bddcfetidp.c
/petsc/src/ksp/pc/impls/bddc/bddcgraph.c
/petsc/src/ksp/pc/impls/bddc/bddcnullspace.c
/petsc/src/ksp/pc/impls/bddc/bddcprivate.c
/petsc/src/ksp/pc/impls/bddc/bddcprivate.h
/petsc/src/ksp/pc/impls/bddc/bddcscalingbasic.c
/petsc/src/ksp/pc/impls/bddc/bddcstructs.h
/petsc/src/ksp/pc/impls/fieldsplit/fieldsplit.c
/petsc/src/ksp/pc/impls/gamg/gamg.c
/petsc/src/ksp/pc/impls/is/nn/nn.c
/petsc/src/ksp/pc/impls/is/pcis.c
/petsc/src/ksp/pc/impls/is/pcis.h
/petsc/src/ksp/pc/interface/precon.c
/petsc/src/mat/coarsen/coarsen.c
/petsc/src/mat/examples/tests/ex170.c
/petsc/src/mat/examples/tests/output/ex152_1.out
/petsc/src/mat/examples/tests/output/ex152_2.out
/petsc/src/mat/examples/tests/output/ex170_0.out
/petsc/src/mat/examples/tests/output/ex170_1.out
/petsc/src/mat/examples/tests/output/ex170_2.out
/petsc/src/mat/examples/tests/output/ex170_3.out
/petsc/src/mat/examples/tests/output/ex170_4.out
/petsc/src/mat/impls/aij/mpi/clique/clique.cxx
/petsc/src/mat/impls/aij/mpi/clique/matcliqueimpl.h
/petsc/src/mat/impls/aij/mpi/mpiov.c
/petsc/src/mat/impls/aij/mpi/mpiviennacl/mpiaijviennacl.cxx
/petsc/src/mat/impls/aij/mpi/mumps/mumps.c
/petsc/src/mat/impls/aij/seq/aij.c
/petsc/src/mat/impls/aij/seq/aij.h
/petsc/src/mat/impls/aij/seq/inode.c
/petsc/src/mat/impls/aij/seq/matmatmult.c
/petsc/src/mat/impls/aij/seq/matptap.c
/petsc/src/mat/impls/aij/seq/seqviennacl/aijviennacl.cxx
/petsc/src/mat/impls/baij/mpi/mpb_baij.c
/petsc/src/mat/impls/baij/mpi/mpibaij.c
/petsc/src/mat/impls/mffd/mffd.c
/petsc/src/mat/interface/dlregismat.c
/petsc/src/mat/interface/matnull.c
/petsc/src/mat/interface/matrix.c
/petsc/src/mat/partition/partition.c
/petsc/src/mat/utils/axpy.c
/petsc/src/mat/utils/gcreate.c
/petsc/src/snes/examples/tutorials/ex12.c
/petsc/src/snes/examples/tutorials/ex31.c
/petsc/src/snes/examples/tutorials/ex62.c
/petsc/src/snes/examples/tutorials/ex72.c
/petsc/src/snes/examples/tutorials/makefile
/petsc/src/snes/impls/ms/ms.c
/petsc/src/snes/interface/dlregissnes.c
/petsc/src/snes/interface/snes.c
/petsc/src/snes/linesearch/impls/bt/linesearchbt.c
/petsc/src/snes/linesearch/impls/cp/linesearchcp.c
/petsc/src/snes/utils/dmplexsnes.c
/petsc/src/snes/utils/dmsnes.c
/petsc/src/sys/classes/bag/bag.c
/petsc/src/sys/classes/draw/interface/drawreg.c
/petsc/src/sys/classes/random/interface/randomc.c
/petsc/src/sys/classes/viewer/impls/binary/binv.c
/petsc/src/sys/classes/viewer/impls/mathematica/mathematica.c
/petsc/src/sys/classes/viewer/impls/vtk/vtkv.c
/petsc/src/sys/classes/viewer/interface/dlregispetsc.c
/petsc/src/sys/classes/viewer/interface/viewreg.c
/petsc/src/sys/dll/dlimpl.c
/petsc/src/sys/dll/reg.c
/petsc/src/sys/examples/tutorials/ex11.c
/petsc/src/sys/examples/tutorials/makefile
/petsc/src/sys/logging/plog.c
/petsc/src/sys/logging/utils/classlog.c
/petsc/src/sys/objects/options.c
/petsc/src/sys/objects/ptype.c
/petsc/src/sys/objects/subcomm.c
/petsc/src/sys/utils/sortd.c
/petsc/src/ts/characteristic/interface/characteristic.c
/petsc/src/ts/characteristic/interface/slregis.c
/petsc/src/ts/examples/tutorials/ex11.c
/petsc/src/ts/examples/tutorials/makefile
/petsc/src/ts/impls/arkimex/arkimex.c
/petsc/src/ts/impls/explicit/ssp/ssp.c
/petsc/src/ts/impls/implicit/gl/gl.c
/petsc/src/ts/impls/rosw/rosw.c
dlregists.c
tscreate.c
/petsc/src/ts/utils/dmts.c
/petsc/src/vec/is/ao/impls/basic/aobasic.c
/petsc/src/vec/is/ao/impls/mapping/aomapping.c
/petsc/src/vec/is/ao/impls/memscalable/aomemscalable.c
/petsc/src/vec/is/ao/interface/ao.c
/petsc/src/vec/is/is/interface/isreg.c
/petsc/src/vec/is/sf/impls/basic/sfbasic.c
/petsc/src/vec/is/sf/interface/sf.c
/petsc/src/vec/is/utils/isltog.c
/petsc/src/vec/is/utils/vsectionis.c
/petsc/src/vec/pf/interface/pf.c
/petsc/src/vec/vec/impls/mpi/mpiviennacl/mpiviennacl.cxx
/petsc/src/vec/vec/impls/mpi/pdvec.c
/petsc/src/vec/vec/impls/seq/bvec2.c
/petsc/src/vec/vec/impls/seq/seqviennacl/vecviennacl.cxx
/petsc/src/vec/vec/interface/dlregisvec.c
/petsc/src/vec/vec/interface/veccreate.c
/petsc/src/vec/vec/interface/vector.c
/petsc/src/vec/vec/utils/vinv.c
/petsc/src/vec/vec/utils/vsection.c
/petsc/tutorials/HandsOnExercise.html
a0931e0326-Aug-2013 Barry Smith <bsmith@mcs.anl.gov>

fix calls to publish SAWs


/petsc/bin/saws/SAWs.py
/petsc/bin/saws/getSAWs.bash
/petsc/bin/saws/getStack.bash
/petsc/include/petsc-private/petscimpl.h
/petsc/include/petscviewersaws.h
/petsc/src/ksp/ksp/interface/ams/kspams.c
/petsc/src/ksp/ksp/interface/itcreate.c
/petsc/src/snes/interface/snes.c
/petsc/src/sys/ams/pams.c
/petsc/src/sys/classes/viewer/impls/ams/ams.c
/petsc/src/sys/classes/viewer/impls/ams/amsopen.c
/petsc/src/sys/error/pstack.c
/petsc/src/sys/objects/aoptions.c
/petsc/src/sys/objects/pinit.c
/petsc/src/sys/webserver/petscwebclient.c
/petsc/src/ts/examples/tutorials/advection-diffusion-reaction/ex5.c
ts.c
9b92129417-Aug-2013 Barry Smith <bsmith@mcs.anl.gov>

Merge branch 'barry/improve-memory-logging'

Conflicts:
src/ksp/pc/impls/redundant/redundant.c
src/mat/interface/matnull.c


/petsc/.mailmap
/petsc/bin/maint/builddist
/petsc/bin/matlab/PetscBagRead.m
/petsc/conf/test
/petsc/config/BuildSystem/config/base.py
/petsc/config/BuildSystem/config/package.py
/petsc/config/BuildSystem/config/packages/MOAB.py
/petsc/config/BuildSystem/config/packages/exodusii.py
/petsc/config/BuildSystem/config/packages/hdf5.py
/petsc/config/BuildSystem/config/programs.py
/petsc/config/BuildSystem/config/setCompilers.py
/petsc/config/PETSc/Configure.py
/petsc/config/PETSc/packages/Zoltan.py
/petsc/config/PETSc/packages/cmake.py
/petsc/config/PETSc/packages/cuda.py
/petsc/config/PETSc/packages/elemental.py
/petsc/config/PETSc/packages/scalapack.py
/petsc/config/PETSc/packages/sundials.py
/petsc/config/configure.py
/petsc/config/examples/arch-cuda-cg-opt.py
/petsc/config/examples/arch-cuda-double.py
/petsc/config/examples/arch-cuda5-cg-opt.py
/petsc/include/finclude/petscmat.h
/petsc/include/finclude/petscpc.h
/petsc/include/petsc-private/bagimpl.h
/petsc/include/petsc-private/dmimpl.h
/petsc/include/petsc-private/matimpl.h
/petsc/include/petsc-private/petscimpl.h
/petsc/include/petsc-private/snesimpl.h
/petsc/include/petscbag.h
/petsc/include/petscdm.h
/petsc/include/petscdmda.h
/petsc/include/petscdmshell.h
/petsc/include/petscerror.h
/petsc/include/petsclog.h
/petsc/include/petscmat.h
/petsc/include/petscpc.h
/petsc/include/petscsnes.h
/petsc/include/petscsys.h
/petsc/include/petscvec.h
/petsc/include/petscversion.h
/petsc/src/contrib/nightlysummary/README
/petsc/src/contrib/nightlysummary/runhtml.sh
/petsc/src/dm/dt/interface/dt.c
/petsc/src/dm/examples/tests/ex7.c
/petsc/src/dm/examples/tutorials/ex14.c
/petsc/src/dm/examples/tutorials/ex7.c
/petsc/src/dm/impls/da/da1.c
/petsc/src/dm/impls/da/da2.c
/petsc/src/dm/impls/da/da3.c
/petsc/src/dm/impls/da/dacorn.c
/petsc/src/dm/impls/da/dacreate.c
/petsc/src/dm/impls/da/dadd.c
/petsc/src/dm/impls/da/daindex.c
/petsc/src/dm/impls/da/daltol.c
/petsc/src/dm/impls/da/dascatter.c
/petsc/src/dm/impls/da/gr1.c
/petsc/src/dm/impls/mesh/mesh.c
/petsc/src/dm/impls/plex/plex.c
/petsc/src/dm/impls/shell/dmshell.c
/petsc/src/dm/impls/shell/ftn-custom/zdmshellf.c
/petsc/src/dm/interface/dm.c
/petsc/src/docs/tex/petsc.bib
/petsc/src/docs/tex/petscapp.bib
/petsc/src/docs/website/developers/index.html
/petsc/src/docs/website/documentation/changes/34.html
/petsc/src/docs/website/documentation/changes/dev.html
/petsc/src/docs/website/documentation/tutorials/index.html
/petsc/src/docs/website/download/index.html
/petsc/src/docs/website/index.html
/petsc/src/ksp/ksp/examples/tests/ex28.c
/petsc/src/ksp/ksp/examples/tests/ex30.c
/petsc/src/ksp/ksp/examples/tests/ex37.c
/petsc/src/ksp/ksp/examples/tests/ex43.c
/petsc/src/ksp/ksp/examples/tests/makefile
/petsc/src/ksp/ksp/examples/tests/output/ex11_1.out
/petsc/src/ksp/ksp/examples/tests/output/ex11_2.out
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/petsc/src/ksp/ksp/examples/tutorials/makefile
/petsc/src/ksp/ksp/examples/tutorials/output/ex10_aijcusparse.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex10_mpicrl.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex10_mpicsrperm.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex10_seqcrl.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex10_seqcsrperm.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex34_1.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex49_1.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex50.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex50_2.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex54_classical.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex55_classical.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex5_redundant.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex5_redundant_0.out
/petsc/src/ksp/ksp/impls/cg/cg.c
/petsc/src/ksp/ksp/impls/cg/cgne/cgne.c
/petsc/src/ksp/ksp/impls/cg/gltr/gltr.c
/petsc/src/ksp/ksp/impls/gmres/agmres/agmres.c
/petsc/src/ksp/ksp/impls/gmres/dgmres/dgmres.c
/petsc/src/ksp/ksp/impls/gmres/fgmres/fgmres.c
/petsc/src/ksp/ksp/impls/gmres/gmres.c
/petsc/src/ksp/ksp/impls/gmres/lgmres/lgmres.c
/petsc/src/ksp/ksp/impls/gmres/pgmres/pgmres.c
/petsc/src/ksp/ksp/impls/lcd/lcd.c
/petsc/src/ksp/ksp/interface/eige.c
/petsc/src/ksp/ksp/interface/iguess.c
/petsc/src/ksp/ksp/interface/itfunc.c
/petsc/src/ksp/ksp/interface/xmon.c
/petsc/src/ksp/pc/impls/ainvcusp/ainvcusp.cu
/petsc/src/ksp/pc/impls/asm/asm.c
/petsc/src/ksp/pc/impls/bddc/bddc.c
/petsc/src/ksp/pc/impls/bddc/bddcgraph.c
/petsc/src/ksp/pc/impls/bddc/bddcnullspace.c
/petsc/src/ksp/pc/impls/bddc/bddcprivate.c
/petsc/src/ksp/pc/impls/bddc/bddcprivate.h
/petsc/src/ksp/pc/impls/bddc/bddcstructs.h
/petsc/src/ksp/pc/impls/bjacobi/bjacobi.c
/petsc/src/ksp/pc/impls/eisens/eisen.c
/petsc/src/ksp/pc/impls/factor/cholesky/cholesky.c
/petsc/src/ksp/pc/impls/factor/factimpl.c
/petsc/src/ksp/pc/impls/factor/factor.c
/petsc/src/ksp/pc/impls/factor/factor.h
/petsc/src/ksp/pc/impls/factor/icc/icc.c
/petsc/src/ksp/pc/impls/factor/ilu/ilu.c
/petsc/src/ksp/pc/impls/factor/lu/lu.c
/petsc/src/ksp/pc/impls/gamg/agg.c
/petsc/src/ksp/pc/impls/gamg/classical.c
/petsc/src/ksp/pc/impls/gamg/gamg.c
/petsc/src/ksp/pc/impls/gamg/gamg.h
/petsc/src/ksp/pc/impls/gamg/geo.c
/petsc/src/ksp/pc/impls/gamg/makefile
/petsc/src/ksp/pc/impls/gasm/gasm.c
/petsc/src/ksp/pc/impls/jacobi/jacobi.c
/petsc/src/ksp/pc/impls/mg/ftn-custom/zmgfuncf.c
/petsc/src/ksp/pc/impls/mg/mg.c
/petsc/src/ksp/pc/impls/mg/mgfunc.c
/petsc/src/ksp/pc/impls/mg/mgimpl.h
/petsc/src/ksp/pc/impls/ml/ml.c
/petsc/src/ksp/pc/impls/redistribute/redistribute.c
/petsc/src/ksp/pc/impls/redundant/redundant.c
/petsc/src/ksp/pc/impls/sacusp/sacusp.cu
/petsc/src/ksp/pc/impls/sacusp/sacusppoly.cu
/petsc/src/ksp/pc/impls/svd/svd.c
/petsc/src/ksp/pc/impls/wb/wb.c
/petsc/src/mat/examples/tests/ex1.c
/petsc/src/mat/examples/tests/ex163.c
/petsc/src/mat/examples/tests/ex86.c
/petsc/src/mat/examples/tests/ex9.c
/petsc/src/mat/examples/tests/makefile
/petsc/src/mat/examples/tests/output/ex114_2.out
/petsc/src/mat/examples/tests/output/ex114_3.out
/petsc/src/mat/examples/tests/output/ex163.out
/petsc/src/mat/examples/tests/output/ex93_1.out
/petsc/src/mat/examples/tests/output/ex93_2.out
/petsc/src/mat/examples/tests/output/ex9_1.out
/petsc/src/mat/examples/tests/output/ex9_2.out
/petsc/src/mat/examples/tests/output/ex9_3.out
/petsc/src/mat/impls/adj/mpi/mpiadj.c
/petsc/src/mat/impls/aij/mpi/fdmpiaij.c
/petsc/src/mat/impls/aij/mpi/makefile
/petsc/src/mat/impls/aij/mpi/mmaij.c
/petsc/src/mat/impls/aij/mpi/mpiaij.c
/petsc/src/mat/impls/aij/mpi/mpiaij.h
/petsc/src/mat/impls/aij/mpi/mpicusp/mpiaijcusp.cu
/petsc/src/mat/impls/aij/mpi/mpicusp/mpicuspmatimpl.h
/petsc/src/mat/impls/aij/mpi/mpicusparse/makefile
/petsc/src/mat/impls/aij/mpi/mpicusparse/mpiaijcusparse.cu
/petsc/src/mat/impls/aij/mpi/mpicusparse/mpicusparsematimpl.h
/petsc/src/mat/impls/aij/mpi/mpimatmatmatmult.c
/petsc/src/mat/impls/aij/mpi/mpimatmatmult.c
/petsc/src/mat/impls/aij/mpi/mpimattransposematmult.c
/petsc/src/mat/impls/aij/mpi/mpiov.c
/petsc/src/mat/impls/aij/seq/aij.c
/petsc/src/mat/impls/aij/seq/aij.h
/petsc/src/mat/impls/aij/seq/aijfact.c
/petsc/src/mat/impls/aij/seq/bas/basfactor.c
/petsc/src/mat/impls/aij/seq/essl/essl.c
/petsc/src/mat/impls/aij/seq/makefile
/petsc/src/mat/impls/aij/seq/matlab/aijmatlab.c
/petsc/src/mat/impls/aij/seq/matmatmult.c
/petsc/src/mat/impls/aij/seq/matptap.c
/petsc/src/mat/impls/aij/seq/matrart.c
/petsc/src/mat/impls/aij/seq/mattransposematmult.c
/petsc/src/mat/impls/aij/seq/seqcusp/aijcusp.cu
/petsc/src/mat/impls/aij/seq/seqcusp/cuspmatimpl.h
/petsc/src/mat/impls/aij/seq/seqcusparse/aijcusparse.cu
/petsc/src/mat/impls/aij/seq/seqcusparse/cusparsematimpl.h
/petsc/src/mat/impls/aij/seq/seqcusparse/makefile
/petsc/src/mat/impls/baij/mpi/mmbaij.c
/petsc/src/mat/impls/baij/mpi/mpibaij.c
/petsc/src/mat/impls/baij/seq/baij.c
/petsc/src/mat/impls/baij/seq/baijfact.c
/petsc/src/mat/impls/baij/seq/baijfact2.c
/petsc/src/mat/impls/baij/seq/baijfact3.c
/petsc/src/mat/impls/blockmat/seq/blockmat.c
/petsc/src/mat/impls/dense/mpi/mmdense.c
/petsc/src/mat/impls/dense/mpi/mpidense.c
/petsc/src/mat/impls/dense/mpi/mpidense.h
/petsc/src/mat/impls/dense/seq/dense.c
/petsc/src/mat/impls/dense/seq/dense.h
/petsc/src/mat/impls/elemental/matelem.cxx
/petsc/src/mat/impls/mffd/mffd.c
/petsc/src/mat/impls/sbaij/mpi/mmsbaij.c
/petsc/src/mat/impls/sbaij/mpi/mpisbaij.c
/petsc/src/mat/impls/sbaij/seq/sbaij.c
/petsc/src/mat/impls/sbaij/seq/sbaijfact.c
/petsc/src/mat/impls/sbaij/seq/sbaijfact2.c
/petsc/src/mat/interface/dlregismat.c
/petsc/src/mat/interface/matnull.c
/petsc/src/mat/interface/matregis.c
/petsc/src/mat/interface/matrix.c
/petsc/src/mat/matfd/fdmatrix.c
/petsc/src/mat/partition/impls/chaco/chaco.c
/petsc/src/snes/examples/tests/output/ex17_1.out
/petsc/src/snes/examples/tests/output/ex1_3.out
/petsc/src/snes/examples/tutorials/ex14.c
/petsc/src/snes/examples/tutorials/ex16.c
/petsc/src/snes/examples/tutorials/makefile
/petsc/src/snes/examples/tutorials/output/ex16_1.out
/petsc/src/snes/examples/tutorials/output/ex16_2.out
/petsc/src/snes/examples/tutorials/output/ex18_1.out
/petsc/src/snes/examples/tutorials/output/ex19_10.out
/petsc/src/snes/examples/tutorials/output/ex19_13.out
/petsc/src/snes/examples/tutorials/output/ex19_6.out
/petsc/src/snes/examples/tutorials/output/ex19_7.out
/petsc/src/snes/examples/tutorials/output/ex19_9.out
/petsc/src/snes/examples/tutorials/output/ex19_ngmres_fas_ms.out
/petsc/src/snes/examples/tutorials/output/ex20_1.out
/petsc/src/snes/examples/tutorials/output/ex2_1.out
/petsc/src/snes/examples/tutorials/output/ex40f90.out
/petsc/src/snes/examples/tutorials/output/ex46_1.out
/petsc/src/snes/examples/tutorials/output/ex48_4.out
/petsc/src/snes/examples/tutorials/output/ex5_1.out
/petsc/src/snes/examples/tutorials/output/ex5_2.out
/petsc/src/snes/examples/tutorials/output/ex5_3.out
/petsc/src/snes/examples/tutorials/output/ex5_4.out
/petsc/src/snes/examples/tutorials/output/ex5_5.out
/petsc/src/snes/examples/tutorials/output/ex62_43.out
/petsc/src/snes/examples/tutorials/output/ex62_45.out
/petsc/src/snes/examples/tutorials/output/ex70_0.out
/petsc/src/snes/examples/tutorials/output/ex70_1.out
/petsc/src/snes/impls/composite/snescomposite.c
/petsc/src/snes/impls/fas/fas.c
/petsc/src/snes/impls/fas/fasfunc.c
/petsc/src/snes/impls/gs/snesgs.c
/petsc/src/snes/impls/ls/ls.c
/petsc/src/snes/impls/ms/ms.c
/petsc/src/snes/impls/multiblock/multiblock.c
/petsc/src/snes/impls/nasm/nasm.c
/petsc/src/snes/impls/ncg/snesncg.c
/petsc/src/snes/impls/ngmres/anderson.c
/petsc/src/snes/impls/ngmres/ngmresfunc.c
/petsc/src/snes/impls/ngmres/snesngmres.c
/petsc/src/snes/impls/ngmres/snesngmres.h
/petsc/src/snes/impls/qn/qn.c
/petsc/src/snes/impls/richardson/snesrichardson.c
/petsc/src/snes/impls/tr/tr.c
/petsc/src/snes/impls/vi/rs/virs.c
/petsc/src/snes/impls/vi/rsaug/virsaug.c
/petsc/src/snes/interface/noise/snesmfj2.c
/petsc/src/snes/interface/snes.c
/petsc/src/snes/interface/snespc.c
/petsc/src/snes/linesearch/impls/cp/linesearchcp.c
/petsc/src/snes/linesearch/impls/l2/linesearchl2.c
/petsc/src/sys/classes/bag/bag.c
/petsc/src/sys/classes/bag/f90-custom/zbagf90.c
/petsc/src/sys/classes/bag/makefile
/petsc/src/sys/classes/draw/impls/opengl/openglops.c
/petsc/src/sys/classes/draw/impls/tikz/tikz.c
/petsc/src/sys/classes/draw/impls/x/xops.c
/petsc/src/sys/classes/draw/utils/axisc.c
/petsc/src/sys/classes/draw/utils/dscatter.c
/petsc/src/sys/classes/draw/utils/hists.c
/petsc/src/sys/classes/draw/utils/lg.c
/petsc/src/sys/classes/draw/utils/lgc.c
/petsc/src/sys/classes/matlabengine/matlab.c
/petsc/src/sys/classes/viewer/impls/ascii/filev.c
/petsc/src/sys/classes/viewer/impls/draw/drawv.c
/petsc/src/sys/classes/viewer/impls/socket/matlab/sopen.c
/petsc/src/sys/error/pstack.c
/petsc/src/sys/examples/tutorials/ex5.c
/petsc/src/sys/examples/tutorials/ex5f90.F90
/petsc/src/sys/logging/ftn-custom/zplogf.c
/petsc/src/sys/logging/plog.c
/petsc/src/sys/memory/mtr.c
/petsc/src/sys/objects/ftn-custom/zstart.c
/petsc/src/sys/objects/inherit.c
/petsc/src/sys/objects/init.c
/petsc/src/sys/objects/pinit.c
/petsc/src/sys/objects/subcomm.c
/petsc/src/sys/threadcomm/interface/threadcomm.c
/petsc/src/sys/time/makefile
/petsc/src/ts/characteristic/impls/da/slda.c
/petsc/src/ts/examples/tutorials/ex13.c
/petsc/src/ts/examples/tutorials/ex16.c
/petsc/src/ts/examples/tutorials/ex21.c
/petsc/src/ts/examples/tutorials/makefile
/petsc/src/ts/examples/tutorials/output/ex13_1.out
/petsc/src/ts/examples/tutorials/output/ex15_1.out
/petsc/src/ts/impls/implicit/gl/gl.c
/petsc/src/ts/impls/implicit/sundials/sundials.c
ts.c
/petsc/src/vec/is/ao/examples/tests/output/ex1_1.out
/petsc/src/vec/is/ao/examples/tests/output/ex1_2.out
/petsc/src/vec/is/ao/examples/tests/output/ex1_3.out
/petsc/src/vec/is/ao/impls/basic/aobasic.c
/petsc/src/vec/is/ao/impls/mapping/aomapping.c
/petsc/src/vec/is/ao/impls/memscalable/aomemscalable.c
/petsc/src/vec/is/is/impls/block/block.c
/petsc/src/vec/is/is/impls/general/general.c
/petsc/src/vec/is/utils/isltog.c
/petsc/src/vec/vec/examples/tests/output/ex37_1.out
/petsc/src/vec/vec/examples/tests/output/ex37_2.out
/petsc/src/vec/vec/impls/mpi/mpicusp/mpicusp.cu
/petsc/src/vec/vec/impls/mpi/pbvec.c
/petsc/src/vec/vec/impls/mpi/pdvec.c
/petsc/src/vec/vec/impls/seq/bvec2.c
/petsc/src/vec/vec/impls/seq/bvec3.c
/petsc/src/vec/vec/impls/seq/seqcusp/cuspvecimpl.h
/petsc/src/vec/vec/impls/seq/seqcusp/veccusp.cu
/petsc/src/vec/vec/utils/veccusp/makefile
/petsc/src/vec/vec/utils/veccusp/vscatcusp.c
/petsc/src/vec/vec/utils/vpscat.c
/petsc/src/vec/vec/utils/vpscat.h
2657e9d910-Aug-2013 Barry Smith <bsmith@mcs.anl.gov>

updated to new /dir1/dir2/variablename scheme for SAWs


/petsc/bin/saws/getStack.bash
/petsc/config/PETSc/packages/saws.py
/petsc/include/petsc-private/petscimpl.h
/petsc/src/ksp/ksp/interface/ams/kspams.c
/petsc/src/ksp/ksp/interface/itcreate.c
/petsc/src/snes/interface/snes.c
/petsc/src/sys/ams/pams.c
/petsc/src/sys/classes/random/interface/randomc.c
/petsc/src/sys/classes/viewer/impls/ams/amsopen.c
/petsc/src/sys/error/pstack.c
/petsc/src/sys/objects/aoptions.c
/petsc/src/sys/objects/inherit.c
/petsc/src/sys/objects/pinit.c
/petsc/src/sys/webserver/petscwebclient.c
ts.c
ca93e95406-Aug-2013 Barry Smith <bsmith@mcs.anl.gov>

update for latest SAWs


/petsc/bin/saws/getSAWs.bash
/petsc/bin/saws/getStack.bash
/petsc/config/PETSc/packages/saws.py
/petsc/include/petsc-private/petscimpl.h
/petsc/src/ksp/ksp/interface/ams/kspams.c
/petsc/src/ksp/ksp/interface/itcreate.c
/petsc/src/mat/impls/mffd/mffd.c
/petsc/src/snes/interface/snes.c
/petsc/src/snes/mf/snesmfj.c
/petsc/src/sys/ams/pams.c
/petsc/src/sys/classes/random/interface/randomc.c
/petsc/src/sys/classes/viewer/impls/ams/amsopen.c
/petsc/src/sys/error/pstack.c
/petsc/src/sys/objects/aoptions.c
/petsc/src/sys/objects/pinit.c
/petsc/src/sys/webserver/petscwebclient.c
ts.c
e04113cf24-Jul-2013 Barry Smith <bsmith@mcs.anl.gov>

converted uAMS usage to SAWs usage; starts server but cannot see any published directories


/petsc/bin/saws/getSAWs.bash
/petsc/bin/saws/getStack.bash
/petsc/conf/test
/petsc/config/PETSc/packages/saws.py
/petsc/include/finclude/petscviewerdef.h
/petsc/include/petsc-private/drawimpl.h
/petsc/include/petsc-private/kspimpl.h
/petsc/include/petsc-private/petscimpl.h
/petsc/include/petsc-private/snesimpl.h
/petsc/include/petscdraw.h
/petsc/include/petscerror.h
/petsc/include/petscksp.h
/petsc/include/petscoptions.h
/petsc/include/petscsys.h
/petsc/include/petscviewer.h
/petsc/include/petscviewersaws.h
/petsc/src/contrib/fun3d/incomp/flow.c
/petsc/src/dm/interface/dm.c
/petsc/src/docs/website/documentation/bugreporting.html
/petsc/src/docs/website/documentation/changes/dev.html
/petsc/src/docs/website/documentation/codemanagement.html
/petsc/src/docs/website/documentation/copyright.html
/petsc/src/docs/website/documentation/faq.html
/petsc/src/docs/website/documentation/index.html
/petsc/src/docs/website/documentation/installation.html
/petsc/src/docs/website/documentation/linearsolvertable.html
/petsc/src/docs/website/documentation/referencing.html
/petsc/src/docs/website/documentation/saws.html
/petsc/src/docs/website/documentation/tutorials/index.html
/petsc/src/docs/website/download/index.html
/petsc/src/docs/website/index.html
/petsc/src/ksp/ksp/impls/bcgs/bcgs.c
/petsc/src/ksp/ksp/impls/bcgs/fbcgs/fbcgs.c
/petsc/src/ksp/ksp/impls/bcgs/fbcgsr/fbcgsr.c
/petsc/src/ksp/ksp/impls/bcgsl/bcgsl.c
/petsc/src/ksp/ksp/impls/bicg/bicg.c
/petsc/src/ksp/ksp/impls/cgs/cgs.c
/petsc/src/ksp/ksp/impls/cheby/cheby.c
/petsc/src/ksp/ksp/impls/cr/cr.c
/petsc/src/ksp/ksp/impls/gmres/agmres/agmres.c
/petsc/src/ksp/ksp/impls/gmres/dgmres/dgmres.c
/petsc/src/ksp/ksp/impls/gmres/fgmres/fgmres.c
/petsc/src/ksp/ksp/impls/gmres/gmres.c
/petsc/src/ksp/ksp/impls/gmres/lgmres/lgmres.c
/petsc/src/ksp/ksp/impls/gmres/pgmres/pgmres.c
/petsc/src/ksp/ksp/impls/lsqr/lsqr.c
/petsc/src/ksp/ksp/impls/qcg/qcg.c
/petsc/src/ksp/ksp/impls/tfqmr/tfqmr.c
/petsc/src/ksp/ksp/interface/ams/kspams.c
/petsc/src/ksp/ksp/interface/ams/makefile
/petsc/src/ksp/ksp/interface/itcl.c
/petsc/src/ksp/ksp/interface/itcreate.c
/petsc/src/ksp/ksp/interface/itfunc.c
/petsc/src/ksp/pc/interface/precon.c
/petsc/src/mat/examples/tests/makefile
/petsc/src/mat/examples/tests/output/ex93_1.out
/petsc/src/mat/examples/tests/output/ex93_2.out
/petsc/src/mat/impls/aij/mpi/mpiaij.h
/petsc/src/mat/impls/aij/mpi/mpimatmatmatmult.c
/petsc/src/mat/impls/aij/mpi/mpimatmatmult.c
/petsc/src/mat/impls/aij/seq/aij.c
/petsc/src/mat/impls/aij/seq/aij.h
/petsc/src/mat/impls/aij/seq/matmatmult.c
/petsc/src/mat/impls/aij/seq/matptap.c
/petsc/src/mat/impls/aij/seq/matrart.c
/petsc/src/mat/interface/matrix.c
/petsc/src/snes/examples/tutorials/makefile
/petsc/src/snes/impls/composite/snescomposite.c
/petsc/src/snes/impls/fas/fas.c
/petsc/src/snes/impls/gs/snesgs.c
/petsc/src/snes/impls/ls/ls.c
/petsc/src/snes/impls/ms/ms.c
/petsc/src/snes/impls/multiblock/multiblock.c
/petsc/src/snes/impls/nasm/nasm.c
/petsc/src/snes/impls/ncg/snesncg.c
/petsc/src/snes/impls/ngmres/anderson.c
/petsc/src/snes/impls/ngmres/snesngmres.c
/petsc/src/snes/impls/qn/qn.c
/petsc/src/snes/impls/richardson/snesrichardson.c
/petsc/src/snes/impls/tr/tr.c
/petsc/src/snes/impls/vi/rs/virs.c
/petsc/src/snes/impls/vi/rsaug/virsaug.c
/petsc/src/snes/impls/vi/ss/viss.c
/petsc/src/snes/interface/snes.c
/petsc/src/snes/linesearch/interface/linesearch.c
/petsc/src/sys/ams/makefile
/petsc/src/sys/ams/pams.c
/petsc/src/sys/classes/draw/impls/x/xinit.c
/petsc/src/sys/classes/draw/interface/draw.c
/petsc/src/sys/classes/draw/interface/drawreg.c
/petsc/src/sys/classes/random/interface/randomc.c
/petsc/src/sys/classes/viewer/impls/ams/ams.c
/petsc/src/sys/classes/viewer/impls/ams/amsopen.c
/petsc/src/sys/classes/viewer/impls/ams/makefile
/petsc/src/sys/classes/viewer/impls/draw/drawv.c
/petsc/src/sys/classes/viewer/interface/view.c
/petsc/src/sys/classes/viewer/interface/viewreg.c
/petsc/src/sys/classes/viewer/interface/viewregall.c
/petsc/src/sys/error/pstack.c
/petsc/src/sys/objects/aoptions.c
/petsc/src/sys/objects/inherit.c
/petsc/src/sys/objects/init.c
/petsc/src/sys/objects/pinit.c
/petsc/src/sys/objects/pname.c
/petsc/src/sys/utils/pdisplay.c
/petsc/src/sys/webserver/petscwebclient.c
/petsc/src/sys/webserver/webserve.c
ts.c
/petsc/src/vec/is/ao/interface/ao.c
/petsc/src/vec/pf/interface/pf.c
/petsc/src/vec/vec/impls/seq/seqcusp/veccusp.cu
/petsc/src/vec/vec/impls/seq/seqviennacl/vecviennacl.cxx
/petsc/src/vec/vec/interface/vector.c
/petsc/src/vec/vec/utils/vscat.c
160ea68715-Jul-2013 Jed Brown <jedbrown@mcs.anl.gov>

Merge branch 'jed/fix-ts-jacobian-linear' into maint

* jed/fix-ts-jacobian-linear:
TS: fix MSVC compiler error: non-POD member of anonymous struct
TS tests/ex3: SNESFD and TSComputeIJacobianCons

Merge branch 'jed/fix-ts-jacobian-linear' into maint

* jed/fix-ts-jacobian-linear:
TS: fix MSVC compiler error: non-POD member of anonymous struct
TS tests/ex3: SNESFD and TSComputeIJacobianConstant are incompatible
TS: fix shortcut scaling; document TSComputeIJacobianConstant limitations
TS tests/ex3: fix example and inclusion in nightlies
TS tests/ex5*: re-activate test and fix monitor interval
TS: add TSRHSJacobianSetReuse, fixes TSComputeRHSJacobianConstant

show more ...


/petsc/bin/maint/builddist
/petsc/bin/matlab/PetscBagRead.m
/petsc/config/BuildSystem/config/base.py
/petsc/config/BuildSystem/config/packages/exodusii.py
/petsc/config/BuildSystem/config/setCompilers.py
/petsc/config/PETSc/Configure.py
/petsc/config/PETSc/packages/Zoltan.py
/petsc/config/PETSc/packages/scalapack.py
/petsc/config/PETSc/packages/sundials.py
/petsc/include/petsc-private/bagimpl.h
/petsc/include/petsc-private/tsimpl.h
/petsc/include/petscerror.h
/petsc/include/petscts.h
/petsc/include/petscversion.h
/petsc/src/dm/dt/interface/dt.c
/petsc/src/dm/examples/tutorials/ex7.c
/petsc/src/docs/website/documentation/changes/34.html
/petsc/src/docs/website/documentation/faq.html
/petsc/src/docs/website/documentation/installation.html
/petsc/src/docs/website/download/index.html
/petsc/src/ksp/ksp/impls/cg/cg.c
/petsc/src/ksp/ksp/impls/cg/cgtype.c
/petsc/src/ksp/ksp/impls/cg/groppcg/groppcg.c
/petsc/src/ksp/ksp/impls/cg/pipecg/pipecg.c
/petsc/src/ksp/ksp/impls/cr/pipecr/pipecr.c
/petsc/src/ksp/ksp/impls/gmres/pgmres/pgmres.c
/petsc/src/ksp/ksp/interface/ams/kspams.c
/petsc/src/ksp/ksp/interface/ams/makefile
/petsc/src/ksp/ksp/interface/makefile
/petsc/src/ksp/pc/impls/mg/ftn-custom/zmgfuncf.c
/petsc/src/mat/impls/aij/seq/matlab/aijmatlab.c
/petsc/src/mat/impls/baij/seq/baijfact2.c
/petsc/src/mat/impls/baij/seq/baijsolv.c
/petsc/src/mat/impls/baij/seq/baijsolvnat.c
/petsc/src/mat/impls/baij/seq/baijsolvtran.c
/petsc/src/mat/impls/baij/seq/baijsolvtrannat.c
/petsc/src/mat/impls/baij/seq/makefile
/petsc/src/mat/partition/impls/chaco/chaco.c
/petsc/src/snes/impls/fas/fas.c
/petsc/src/snes/impls/vi/rs/virs.c
/petsc/src/snes/impls/vi/ss/viss.c
/petsc/src/snes/interface/snes.c
/petsc/src/sys/classes/bag/bag.c
/petsc/src/sys/classes/bag/f90-custom/zbagf90.c
/petsc/src/sys/classes/bag/makefile
/petsc/src/sys/classes/matlabengine/matlab.c
/petsc/src/sys/classes/viewer/impls/hdf5/ftn-custom/zhdf5f.c
/petsc/src/sys/classes/viewer/impls/hdf5/hdf5v.c
/petsc/src/sys/classes/viewer/impls/socket/matlab/sopen.c
/petsc/src/sys/error/pstack.c
/petsc/src/sys/logging/ftn-custom/zplogf.c
/petsc/src/sys/memory/mtr.c
/petsc/src/sys/objects/ftn-custom/zstart.c
/petsc/src/sys/objects/inherit.c
/petsc/src/sys/objects/pinit.c
/petsc/src/sys/threadcomm/interface/threadcomm.c
/petsc/src/sys/time/makefile
/petsc/src/ts/examples/tests/ex3.c
/petsc/src/ts/examples/tests/ex5.c
/petsc/src/ts/examples/tests/makefile
/petsc/src/ts/examples/tutorials/makefile
/petsc/src/ts/examples/tutorials/output/ex3_3.out
/petsc/src/ts/examples/tutorials/output/ex3_4.out
/petsc/src/ts/examples/tutorials/output/ex3_5.out
ts.c
tscreate.c
/petsc/systems/Apple/OSX/bin/makedmg
/petsc/systems/Apple/OSX/examples/PETSc cocoa example/PETSc cocoa example/AppDelegate.m
/petsc/systems/Apple/OSX/examples/PETSc command line example/PETSc command line example/main.c
ec957ece04-Jul-2013 Barry Smith <bsmith@mcs.anl.gov>

updated to new version of AMS; not tested


/petsc/bin/maint/builddist
/petsc/bin/matlab/PetscBagRead.m
/petsc/config/BuildSystem/config/base.py
/petsc/config/BuildSystem/config/package.py
/petsc/config/BuildSystem/config/packages/MOAB.py
/petsc/config/BuildSystem/config/packages/exodusii.py
/petsc/config/BuildSystem/config/setCompilers.py
/petsc/config/PETSc/Configure.py
/petsc/config/PETSc/packages/ams.py
/petsc/config/PETSc/packages/cmake.py
/petsc/config/PETSc/packages/sundials.py
/petsc/config/PETSc/packages/uams.py
/petsc/include/finclude/petscpc.h
/petsc/include/petsc-private/bagimpl.h
/petsc/include/petsc-private/petscimpl.h
/petsc/include/petscbag.h
/petsc/include/petscksp.h
/petsc/include/petscmat.h
/petsc/include/petscpc.h
/petsc/include/petscviewerams.h
/petsc/src/dm/dt/interface/dt.c
/petsc/src/dm/examples/tutorials/ex7.c
/petsc/src/docs/tex/petscapp.bib
/petsc/src/docs/website/developers/index.html
/petsc/src/docs/website/documentation/changes/34.html
/petsc/src/docs/website/documentation/changes/dev.html
/petsc/src/docs/website/download/index.html
/petsc/src/ksp/ksp/examples/tests/ex30.c
/petsc/src/ksp/ksp/examples/tests/makefile
/petsc/src/ksp/ksp/examples/tests/output/ex11_1.out
/petsc/src/ksp/ksp/examples/tests/output/ex11_2.out
/petsc/src/ksp/ksp/examples/tests/output/ex30.out
/petsc/src/ksp/ksp/examples/tests/output/ex30_2.out
/petsc/src/ksp/ksp/examples/tutorials/makefile
/petsc/src/ksp/ksp/examples/tutorials/output/ex10_aijcusparse.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex10_mpicrl.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex10_mpicsrperm.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex10_seqcrl.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex10_seqcsrperm.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex34_1.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex50.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex50_2.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex54_classical.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex55_classical.out
/petsc/src/ksp/ksp/impls/gmres/dgmres/dgmres.c
/petsc/src/ksp/ksp/interface/ams/kspams.c
/petsc/src/ksp/ksp/interface/itcl.c
/petsc/src/ksp/ksp/interface/itcreate.c
/petsc/src/ksp/pc/impls/factor/factimpl.c
/petsc/src/ksp/pc/impls/factor/factor.c
/petsc/src/ksp/pc/impls/factor/factor.h
/petsc/src/ksp/pc/impls/factor/icc/icc.c
/petsc/src/ksp/pc/impls/factor/ilu/ilu.c
/petsc/src/ksp/pc/impls/gamg/agg.c
/petsc/src/ksp/pc/impls/gamg/classical.c
/petsc/src/ksp/pc/impls/gamg/gamg.c
/petsc/src/ksp/pc/impls/gamg/gamg.h
/petsc/src/ksp/pc/impls/gamg/geo.c
/petsc/src/ksp/pc/impls/gamg/makefile
/petsc/src/ksp/pc/impls/mg/ftn-custom/zmgfuncf.c
/petsc/src/ksp/pc/impls/mg/mg.c
/petsc/src/ksp/pc/impls/mg/mgfunc.c
/petsc/src/ksp/pc/impls/mg/mgimpl.h
/petsc/src/ksp/pc/impls/ml/ml.c
/petsc/src/ksp/pc/interface/precon.c
/petsc/src/mat/examples/tests/ex1.c
/petsc/src/mat/examples/tests/ex163.c
/petsc/src/mat/examples/tests/makefile
/petsc/src/mat/examples/tests/output/ex114_2.out
/petsc/src/mat/examples/tests/output/ex114_3.out
/petsc/src/mat/examples/tests/output/ex163.out
/petsc/src/mat/impls/aij/mpi/makefile
/petsc/src/mat/impls/aij/mpi/mpiaij.h
/petsc/src/mat/impls/aij/mpi/mpimattransposematmult.c
/petsc/src/mat/impls/aij/seq/aij.h
/petsc/src/mat/impls/aij/seq/makefile
/petsc/src/mat/impls/aij/seq/matlab/aijmatlab.c
/petsc/src/mat/impls/aij/seq/mattransposematmult.c
/petsc/src/mat/impls/dense/mpi/mpidense.c
/petsc/src/mat/impls/dense/mpi/mpidense.h
/petsc/src/mat/impls/dense/seq/dense.c
/petsc/src/mat/impls/dense/seq/dense.h
/petsc/src/mat/interface/dlregismat.c
/petsc/src/mat/interface/matrix.c
/petsc/src/mat/partition/impls/chaco/chaco.c
/petsc/src/snes/examples/tests/output/ex17_1.out
/petsc/src/snes/examples/tutorials/output/ex18_1.out
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/petsc/src/snes/examples/tutorials/output/ex70_0.out
/petsc/src/snes/examples/tutorials/output/ex70_1.out
/petsc/src/snes/interface/snes.c
/petsc/src/sys/ams/pams.c
/petsc/src/sys/classes/bag/bag.c
/petsc/src/sys/classes/bag/f90-custom/zbagf90.c
/petsc/src/sys/classes/bag/makefile
/petsc/src/sys/classes/matlabengine/matlab.c
/petsc/src/sys/classes/random/interface/randomc.c
/petsc/src/sys/classes/viewer/impls/ams/ams.c
/petsc/src/sys/classes/viewer/impls/ams/amsopen.c
/petsc/src/sys/classes/viewer/impls/ascii/filev.c
/petsc/src/sys/classes/viewer/impls/socket/matlab/sopen.c
/petsc/src/sys/classes/viewer/interface/viewreg.c
/petsc/src/sys/error/pstack.c
/petsc/src/sys/examples/tutorials/ex5.c
/petsc/src/sys/examples/tutorials/ex5f90.F90
/petsc/src/sys/logging/ftn-custom/zplogf.c
/petsc/src/sys/objects/aoptions.c
/petsc/src/sys/objects/inherit.c
/petsc/src/sys/objects/init.c
/petsc/src/sys/objects/pinit.c
/petsc/src/sys/webserver/petscwebclient.c
/petsc/src/ts/examples/tutorials/ex13.c
/petsc/src/ts/examples/tutorials/makefile
/petsc/src/ts/examples/tutorials/output/ex13_1.out
/petsc/src/ts/examples/tutorials/output/ex15_1.out
ts.c
/petsc/src/vec/is/ao/examples/tests/output/ex1_1.out
/petsc/src/vec/is/ao/examples/tests/output/ex1_2.out
/petsc/src/vec/is/ao/examples/tests/output/ex1_3.out
/petsc/src/vec/vec/examples/tests/output/ex37_1.out
/petsc/src/vec/vec/examples/tests/output/ex37_2.out
2dc7a7e329-Jun-2013 Shri Abhyankar <abhyshr@mcs.anl.gov>

Moved TSEvent code to a seperate folder.


/petsc/src/ts/event/makefile
/petsc/src/ts/event/tsevent.c
ts.c
/petsc/src/ts/makefile
002e7ee429-Jun-2013 Shri Abhyankar <abhyshr@mcs.anl.gov>

Fix doc for TSSetEventMonitor()


/petsc/src/ts/examples/tests/ex22.c
ts.c
eeae5b0c29-Jun-2013 Shri Abhyankar <abhyshr@mcs.anl.gov>

Don't need to use collective TSSetTimeStep(), instead set ts->time_step


ts.c
e233a0e429-Jun-2013 Shri Abhyankar <abhyshr@mcs.anl.gov>

Parallel TS event handling interface works now.

Updated TSEventMonitor() to have it work in parallel.
Added a parallel bouncing ball example.


/petsc/src/ts/examples/tests/ex23.c
/petsc/src/ts/examples/tests/makefile
ts.c
1e0499e528-Jun-2013 Shri Abhyankar <abhyshr@mcs.anl.gov>

Fix compilation error because PostEvent wasn't renamed to TSPostEvent in TSEventMonitor() call.


ts.c
8bb0fe7028-Jun-2013 Shri Abhyankar <abhyshr@mcs.anl.gov>

Renamed event_tol to ts_event_tol and PostEvent() to TSPostEvent()


ts.c
90932dee28-Jun-2013 Shri Abhyankar <abhyshr@mcs.anl.gov>

Bug fix to avoid hitting back-to-back event zero.


/petsc/src/ts/examples/tests/ex22.c
ts.c
75d33d5326-Jun-2013 Satish Balay <balay@mcs.anl.gov>

ts.c: fix c89 syntax for windows build


ts.c
a90b9f8123-Jun-2013 Shri Abhyankar <abhyshr@mcs.anl.gov>

Removed TSEVENTSZEROMAX.


/petsc/include/petsc-private/tsimpl.h
/petsc/src/ts/examples/tests/ex21.c
ts.c
aeb4809d23-Jun-2013 Shri Abhyankar <abhyshr@mcs.anl.gov>

Started incorporating the event interface in TS.


/petsc/include/petsc-private/tsimpl.h
/petsc/include/petscts.h
/petsc/src/mat/examples/tests/makefile
/petsc/src/mat/impls/aij/seq/matptap.c
/petsc/src/ts/examples/tests/ex21.c
/petsc/src/ts/examples/tests/makefile
/petsc/src/ts/impls/arkimex/arkimex.c
/petsc/src/ts/impls/implicit/theta/theta.c
/petsc/src/ts/impls/rosw/rosw.c
ts.c
f68a32c824-May-2013 Emil Constantinescu <emconsta@mcs.anl.gov>

Implemented the renovated RK.
The first 6 commits are squashed and the text is preserved below.

modified the comment in rk.c

Copied arkimex.c to rk.c... will now start removing the implicit parts..

Implemented the renovated RK.
The first 6 commits are squashed and the text is preserved below.

modified the comment in rk.c

Copied arkimex.c to rk.c... will now start removing the implicit parts..

Renamed all ARKIMEX to RK in the variables... edited the structures representing the RK scheme...

Rough cut: removed all implicit stuff from ARKIMEX to get RK... have registered forward Euler, RK2 and RK3...

TSRK is *sort of* running... with probably some issues that need to be ironed out...

Added two more RK methods of orders 4 and 5, verified the rates of convergence for all the RK methods implemented...

show more ...


/petsc/.gitignore
/petsc/.mailmap
/petsc/bin/maint/builddist
/petsc/bin/maint/buildtest
/petsc/bin/maint/createpatch
/petsc/bin/maint/rebuildtar
/petsc/bin/maint/startnightly
/petsc/bin/maint/update-docs.py
/petsc/bin/mpiexec.uni
/petsc/bin/petscnagupgrade.py
/petsc/bin/pythonscripts/PetscGenerateFEMQuadrature.py
/petsc/bin/pythonscripts/PetscGenerateFEMQuadratureTensorProduct.py
/petsc/config/BuildSystem/config/libraries.py
/petsc/config/BuildSystem/config/packages/MPI.py
/petsc/config/BuildSystem/config/packages/exodusii.py
/petsc/config/BuildSystem/config/packages/hdf5.py
/petsc/config/BuildSystem/config/setCompilers.py
/petsc/config/PETSc/FEM.py
/petsc/config/PETSc/packages/SuperLU_DIST.py
/petsc/config/PETSc/packages/parmetis.py
/petsc/config/builder.py
/petsc/config/builder2.py
/petsc/include/finclude/ftn-custom/petscdmplex.h90
/petsc/include/finclude/petscdmplexdef.h
/petsc/include/finclude/petsctsdef.h
/petsc/include/finclude/petscvec.h
/petsc/include/petsc-private/dmdaimpl.h
/petsc/include/petsc-private/dmpleximpl.h
/petsc/include/petsc-private/kernels/blockinvert.h
/petsc/include/petsc-private/kernels/blockmatmult.h
/petsc/include/petsc-private/kernels/petscaxpy.h
/petsc/include/petscblaslapack.h
/petsc/include/petscdm.h
/petsc/include/petscdmda.h
/petsc/include/petscdmplex.h
/petsc/include/petscerror.h
/petsc/include/petscmat.h
/petsc/include/petscsnes.h
/petsc/include/petscsys.h
/petsc/include/petscts.h
/petsc/include/petscvec.h
/petsc/include/petscversion.h
/petsc/include/sieve/ISieve.hh
/petsc/makefile
/petsc/setup.py
/petsc/src/dm/dt/interface/dt.c
/petsc/src/dm/examples/tests/ex15.c
/petsc/src/dm/examples/tutorials/ex14.c
/petsc/src/dm/examples/tutorials/ex19.c
/petsc/src/dm/examples/tutorials/ex3.c
/petsc/src/dm/examples/tutorials/ex6.c
/petsc/src/dm/impls/da/da.c
/petsc/src/dm/impls/da/da1.c
/petsc/src/dm/impls/da/da2.c
/petsc/src/dm/impls/da/da3.c
/petsc/src/dm/impls/da/dacreate.c
/petsc/src/dm/impls/da/dadd.c
/petsc/src/dm/impls/plex/examples/tests/ex1.c
/petsc/src/dm/impls/plex/examples/tests/ex1f90.F
/petsc/src/dm/impls/plex/examples/tests/ex2f90.F
/petsc/src/dm/impls/plex/examples/tests/ex3.c
/petsc/src/dm/impls/plex/examples/tests/ex5.c
/petsc/src/dm/impls/plex/examples/tests/ex7.c
/petsc/src/dm/impls/plex/examples/tests/ex8.c
/petsc/src/dm/impls/plex/examples/tests/makefile
/petsc/src/dm/impls/plex/examples/tests/output/ex1_0.out
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/petsc/src/dm/impls/plex/examples/tests/output/ex1_8.out
/petsc/src/dm/impls/plex/examples/tests/output/ex1f90_0.out
/petsc/src/dm/impls/plex/examples/tests/output/ex2f90_0.out
/petsc/src/dm/impls/plex/examples/tests/output/ex4_2.out
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/petsc/src/dm/impls/plex/examples/tests/output/ex7_11.out
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/petsc/src/dm/impls/plex/examples/tests/output/ex7_7.out
/petsc/src/dm/impls/plex/examples/tests/output/ex8_0.out
/petsc/src/dm/impls/plex/examples/tests/output/ex8_1.out
/petsc/src/dm/impls/plex/examples/tutorials/ex1.c
/petsc/src/dm/impls/plex/examples/tutorials/ex1f90.F
/petsc/src/dm/impls/plex/examples/tutorials/output/ex1_1.out
/petsc/src/dm/impls/plex/examples/tutorials/output/ex1f90_1.out
/petsc/src/dm/impls/plex/f90-custom/zplexf90.c
/petsc/src/dm/impls/plex/ftn-custom/makefile
/petsc/src/dm/impls/plex/ftn-custom/zplex.c
/petsc/src/dm/impls/plex/ftn-custom/zplexsubmesh.c
/petsc/src/dm/impls/plex/makefile
/petsc/src/dm/impls/plex/plex.c
/petsc/src/dm/impls/plex/plexcgns.c
/petsc/src/dm/impls/plex/plexcreate.c
/petsc/src/dm/impls/plex/plexexodusii.c
/petsc/src/dm/impls/plex/plexfem.c
/petsc/src/dm/impls/plex/plexgeometry.c
/petsc/src/dm/impls/plex/plexinterpolate.c
/petsc/src/dm/impls/plex/plexpreallocate.c
/petsc/src/dm/impls/plex/plexsubmesh.c
/petsc/src/dm/impls/plex/plexvtk.c
/petsc/src/dm/interface/dm.c
/petsc/src/docs/doxygen/manual/user/introduction/getting-started.h
/petsc/src/docs/tex/manual/developers.tex
/petsc/src/docs/tex/manual/intro.tex
/petsc/src/docs/tex/manual/makefile
/petsc/src/docs/tex/manual/manual.tex
/petsc/src/docs/tex/manual/part1.tex
/petsc/src/docs/tex/manual/part2.tex
/petsc/src/docs/tex/petsc.bib
/petsc/src/docs/tex/petscapp.bib
/petsc/src/docs/website/documentation/changes/2015.html
/petsc/src/docs/website/documentation/changes/2016.html
/petsc/src/docs/website/documentation/changes/2017.html
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/petsc/src/docs/website/documentation/changes/index.html
/petsc/src/docs/website/documentation/faq.html
/petsc/src/docs/website/documentation/installation.html
/petsc/src/docs/website/documentation/referencing.html
/petsc/src/docs/website/download/index.html
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/petsc/src/docs/website/index.html
/petsc/src/ksp/ksp/examples/tests/ex44.c
/petsc/src/ksp/ksp/examples/tests/makefile
/petsc/src/ksp/ksp/examples/tests/output/ex44_aij_nonz.out
/petsc/src/ksp/ksp/examples/tests/output/ex44_aij_zero.out
/petsc/src/ksp/ksp/examples/tutorials/ex13f90.F
/petsc/src/ksp/ksp/examples/tutorials/ex45f.F
/petsc/src/ksp/ksp/examples/tutorials/ex8.c
/petsc/src/ksp/ksp/examples/tutorials/ex8g.c
/petsc/src/ksp/ksp/examples/tutorials/makefile
/petsc/src/ksp/ksp/examples/tutorials/output/ex15_1.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex23_2.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex43_bjacobi.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex45f_1.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex54_0.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex54_1.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex54f.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex55_0.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex55_NC.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex55_sa.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex56_0.out
/petsc/src/ksp/ksp/impls/bcgsl/bcgsl.c
/petsc/src/ksp/ksp/impls/cg/gltr/gltr.c
/petsc/src/ksp/ksp/impls/cg/pipecg/pipecg.c
/petsc/src/ksp/ksp/impls/gmres/agmres/agmres.c
/petsc/src/ksp/ksp/impls/gmres/agmres/agmresdeflation.c
/petsc/src/ksp/ksp/impls/gmres/agmres/agmresorthog.c
/petsc/src/ksp/ksp/impls/gmres/dgmres/dgmres.c
/petsc/src/ksp/ksp/impls/gmres/gmreig.c
/petsc/src/ksp/ksp/interface/eige.c
/petsc/src/ksp/ksp/interface/itcreate.c
/petsc/src/ksp/ksp/interface/itfunc.c
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9a6158bf19-Jun-2013 Jed Brown <jedbrown@mcs.anl.gov>

Merge branch 'barry/fix-PetscObjectPrintClassNamePrefixType'

* barry/fix-PetscObjectPrintClassNamePrefixType:
update tests of src/mat/examples/tests/ex136.c
Use classname in object for object na

Merge branch 'barry/fix-PetscObjectPrintClassNamePrefixType'

* barry/fix-PetscObjectPrintClassNamePrefixType:
update tests of src/mat/examples/tests/ex136.c
Use classname in object for object name when calling PetscObjectPrintClassNamePrefixType() instead of some string with less precise name passed in

Conflicts:
src/snes/interface/snes.c

show more ...


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ts.c
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/petsc/src/vec/vec/impls/mpi/pdvec.c
/petsc/src/vec/vec/impls/nest/vecnest.c
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/petsc/src/vec/vec/impls/seq/seqviennacl/vecviennacl.cxx
/petsc/src/vec/vec/impls/seq/seqviennacl/viennaclvecimpl.h
/petsc/src/vec/vec/interface/dlregisvec.c
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/petsc/systems/Apple/OSX/bin/makedmg
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/petsc/systems/Apple/OSX/examples/PETSc command line example/PETSc command line example/main.c
2465532817-Jun-2013 Shri <abhyshr@mcs.anl.gov>

TS: Rollback current step

Added TSRollBack() to rollback the current step. This feature is currently
available with arkimex, rosw, and theta methods. Tested on tutorials/ex8.c


/petsc/bin/maint/builddist
/petsc/config/PETSc/packages/opencl.py
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/petsc/config/examples/arch-viennacl.py
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dacc3f4205-Jun-2013 Jed Brown <jedbrown@mcs.anl.gov>

Merge branch 'jed/fix-ts-jacobian-linear'

* jed/fix-ts-jacobian-linear:
TS: fix MSVC compiler error: non-POD member of anonymous struct
TS tests/ex3: SNESFD and TSComputeIJacobianConstant are in

Merge branch 'jed/fix-ts-jacobian-linear'

* jed/fix-ts-jacobian-linear:
TS: fix MSVC compiler error: non-POD member of anonymous struct
TS tests/ex3: SNESFD and TSComputeIJacobianConstant are incompatible
TS: fix shortcut scaling; document TSComputeIJacobianConstant limitations
TS tests/ex3: fix example and inclusion in nightlies
TS tests/ex5*: re-activate test and fix monitor interval
TS: add TSRHSJacobianSetReuse, fixes TSComputeRHSJacobianConstant

show more ...


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ts.c
tscreate.c
8f6c3df801-Jun-2013 Barry Smith <bsmith@mcs.anl.gov>

Removed the ability of XXXType to be the string name of a library and function in that library but forgot to remove this form from all the XXXAType manual pages


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b41af12e31-May-2013 Jed Brown <jedbrown@mcs.anl.gov>

TS: fix shortcut scaling; document TSComputeIJacobianConstant limitations

The shortcut re-shifting on re-evaluation of the IJacobian can only be
used when the implicit system is just the "mass matri

TS: fix shortcut scaling; document TSComputeIJacobianConstant limitations

The shortcut re-shifting on re-evaluation of the IJacobian can only be
used when the implicit system is just the "mass matrix". This
re-scaling also needs to be recorded for the next iteration. Since this
logic cannot work in general, it is now moved to
TSComputeIJacobianConstant. This funtion seems to be of limited use
beyond "explicit" finite element computations (especially those that use
a consistent mass matrix) and similar.

show more ...


/petsc/include/petsc-private/tsimpl.h
/petsc/src/ts/examples/tests/ex3.c
/petsc/src/ts/examples/tests/ex5.c
/petsc/src/ts/examples/tests/makefile
ts.c
tscreate.c
e1244c6931-May-2013 Jed Brown <jedbrown@mcs.anl.gov>

TS: add TSRHSJacobianSetReuse, fixes TSComputeRHSJacobianConstant

When using a constant RHS and no IJacobian, the RHS Jacobian is shifted
to make it function as an IJacobian (shift*I - Arhs), which

TS: add TSRHSJacobianSetReuse, fixes TSComputeRHSJacobianConstant

When using a constant RHS and no IJacobian, the RHS Jacobian is shifted
to make it function as an IJacobian (shift*I - Arhs), which is the matrix
used by SNES. We don't want to duplicate the full matrix because that
uses a lot of memory, so we play this game of recording the shift and
scale, then unshifting in TSComputeRHSJacobian. Add tests that fail
prior to this bug fix.

show more ...


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