Lines Matching +full:petsc4py +full:- +full:pip
3 % bibtool petsc.bib -- expand.macros=on -- print.line.length=100 -- pass.comments=on
17 % LiteralHTML: <a name="nano"><H3><center>Nano-simulations</center></H3>
19 @Misc{ semver-webpage,
25 title = {{D}-stability and {K}aps-{R}entrop-methods},
30 pages = {229--237},
41 pages = {93--113},
55 title = {Generalized {R}unge--{K}utta methods of order four with stepsize control for stiff ordinary differential equations},
59 pages = {55--68},
73 title = {A Time Integration Algorithm for Structural Dynamics With Improved Numerical Dissipation: The Generalized-alpha Method},
77 pages = {371-375},
80 issn = {0021-8936},
83 eprint = {https://asmedigitalcollection.asme.org/appliedmechanics/article-pdf/60/2/371/5463014/371\_1.pdf},
87 title = {Analysis and implementation of {TR-BDF2}},
91 number = {1-2},
92 pages = {21--37},
98 title = {Diagonally implicit {R}unge--{K}utta methods for stiff {ODE}s},
102 pages = {221--244},
111 pages = {7389--7398},
116 title = {Time-step limits for stable solutions of the ice-sheet equation},
120 pages = {74--85},
126 title = {Flexible complementarity solvers for large-scale applications},
131 pages = {155--168},
137 title = {Representations of quasi-{N}ewton matrices and their use in limited memory methods},
141 number = {1-3},
142 pages = {129--156},
148 title = {Some numerical experiments with variable-storage quasi-{N}ewton algorithms},
152 number = {1-3},
153 pages = {407--435},
159 title = {Accelerating limited-memory quasi-{N}ewton convergence for large-scale optimization},
161 booktitle = {Computational Science--ICCS 2019: 19th International Conference, Faro, Portugal, June 12--14, 2019, Proceedings, Part III 19},
162 pages = {495--507},
168 title = {Linear and nonlinear solvers for simulating multiphase flow within large-scale engineered subsurface systems},
178 title = {Design of optimally smoothing multi-stage schemes for the {E}uler equations},
179 author = {Van Leer, Bram and Tai, Chang-Hsien and Powell, Kenneth},
191 pages = {425--445},
198 author = {Kong, Fande and Cai, Xiao-Chuan},
202 pages = {C73--C95},
208 title = {Accommodating thread-level heterogeneity in coupled parallel applications},
212 pages = {469--478},
218 title = {Bi-modal MPI and MPI+ threads computing on scalable multicore systems},
225 title = {A parallel distance-2 graph coloring algorithm for distributed memory computers},
228 pages = {796--806},
239 pages = {2897--2923},
250 pages = {2153--2168},
259 pages = {247--254},
277 pages = {1662--1694},
295 pages = {1--24},
303 pages = {355--357},
308 title = {Recent advances in domain decomposition methods for large-scale saddle point problems},
309 author = {Nataf, Fr{\'e}d{\'e}ric and Tournier, Pierre-Henri},
313 pages = {1--15},
323 pages = {A2582--A2598},
334 pages = {A1047--A1068},
341 author = {Al Daas, Hussam and Grigori, Laura and Jolivet, Pierre and Tournier, Pierre-Henri},
345 pages = {A1907--A1928},
358 title = {A robust two-level domain decomposition preconditioner for systems of {PDE}s},
362 number = {23-24},
363 pages = {1255--1259},
369 title = {A Highly Parallel Multilevel {N}ewton--{K}rylov--{S}chwarz Method with Subspace-Based Coarsening and
370 Partition-Based Balancing for the Multigroup Neutron Transport Equation on Three-Dimensional Unstructured Meshes},
376 pages = {C193--C220},
387 pages = {1050--1051},
398 pages = {1969--1972},
404 title = {An implicit, numerical method for solving two-dimensional time-dependent diffusion problems},
409 pages = {221--229},
414 title = {An approximate factorization procedure for solving self-adjoint elliptic difference equations},
419 pages = {559--573},
428 pages = {41--61},
437 pages = {167--202},
447 number = {2-3},
448 pages = {55--85},
454 title = {Dual-primal {FETI} methods for linear elasticity},
459 pages = {1523--1572},
470 pages = {149--168},
483 title = {{TSIRM}: A two-stage iteration with least-squares residual minimization algorithm to solve large sparse linear and nonlinear systems},
487 pages = {535--546},
493 title = {Transpose-free formulations of Lanczos-type methods for nonsymmetric linear systems},
497 pages = {51--66},
503 title = {Performance of {LCD} iterative method in the finite element and finite difference solution of convection--diffusion equations},
508 pages = {643--656},
519 pages = {1513--1534},
525 title = {Study on semi-conjugate direction methods for non-symmetric systems},
526 author = {Dai, Yu-Hong and Yuan, Jinyun},
530 pages = {1383--1399},
536 title = {Semi-conjugate direction methods for real positive definite systems},
540 pages = {189--207},
546 title = {A breakdown-free block conjugate gradient method},
550 pages = {379--403},
557 author = {Jolivet, Pierre and Tournier, Pierre-Henri},
559 pages = {190--203},
565 title = {A modified block flexible {GMRES} method with deflation at each iteration for the solution of non-{H}ermitian linear systems with multiple right-hand sides},
570 pages = {S345--S367},
580 pages = {293--322},
591 pages = {303--318},
602 pages = {563--581},
613 pages = {305--331},
622 pages = {1--12},
627 title = {Communication-optimal parallel and sequential {QR} and {LU} factorizations},
632 pages = {A206--A239},
643 pages = {1171--1186},
653 pages = {158--167},
662 url = {https://hal.inria.fr/inria-00638247/en}
666 title = {A {FETI-DP} type domain decomposition algorithm for three-dimensional incompressible {S}tokes equations},
671 pages = {720--742},
677 title = {{FETI-DP}: a dual--primal unified {FETI} method—part {I}: A faster alternative to the two-level {FETI} method},
682 pages = {1523--1544},
688 title = {Optimal polynomial smoothers for multigrid {V}-cycles},
699 title = {Optimal {C}hebyshev Smoothers and One-sided {V}-cycles},
709 pages = {57--88},
720 pages = {2507--2522},
726 title = {The communication-hiding conjugate gradient method with deep pipelines},
735 journal = {Computer Science Technical Report CS-93-185, University of Tennessee, Knoxville},
754 title = {{BiCGstab}(l) and other hybrid {Bi-CG} methods},
758 pages = {75--109},
769 pages = {235--254},
775 title = {Projection techniques for iterative solution of Ax= b with successive right-hand sides},
779 number = {1-4},
780 pages = {193--204},
792 pages = {62--71},
810 pages = {221--230},
815 title = {Adaptive time-stepping and computational stability},
820 pages = {225--243},
826 title = {Digital filters in adaptive time-stepping},
831 pages = {1--26},
837 title = {Proper orthogonal decomposition: Theory and reduced-order modelling},
842 pages = {1--29},
844 url = {http://www.math.uni-konstanz.de/numerik/personen/volkwein/teaching/POD-Book.pdf}
853 pages = {151--159},
864 pages = {239--278},
870 title = {A {N}ewton-{MR} algorithm with complexity guarantees for nonconvex smooth unconstrained optimization},
877 title = {{MINRES-QLP}: A {K}rylov subspace method for indefinite or singular symmetric systems},
878 author = {Choi, Sou-Cheng T and Paige, Christopher C and Saunders, Michael A},
882 pages = {1810--1836},
888 title = {Predict-and-recompute conjugate gradient variants},
893 pages = {A3084--A3108},
904 pages = {426--450},
913 pages = {151--160},
919 title = {Newton-type minimization via the {L}anczos method},
924 pages = {770--788},
930 title = {Scalable non-blocking preconditioned conjugate gradient methods},
933 pages = {204--215},
939 title = {Solving the trust-region subproblem using the Lanczos method},
944 pages = {504--525},
950 title = {The communication-hiding pipelined {BiCGstab} method for the parallel solution of large unsymmetric linear systems},
954 pages = {1--20},
962 howpublished = {\url{https://www.mcs.anl.gov/~fathom/moab-docs/html/contents.html}},
971 isbn = {978-3-642-23898-7},
972 doi = {10.1007/978-3-642-23899-4},
973 publisher = {Springer-Verlag},
978 title = {{R}unge--{K}utta methods with minimum storage implementations},
983 pages = {1763--1773},
989 title = {{A}nderson acceleration for fixed-point iterations},
994 pages = {1715--1735},
1005 pages = {2534--2548},
1014 pages = {208--216},
1017 author = {ZHANG Xian-Yi and WANG Qian and ZHANG Yun-Quan Richard}
1020 @Misc{ openblas-website,
1026 @Misc{ openacc-website,
1041 title = {Toward Performance-Portable {PETSc} for {GPU}-based Exascale Systems},
1046 number = {ANL/MCS-P9401-1020},
1053 title = {Toward performance-portable {PETS}c for {GPU}-based exascale systems},
1058 issn = {0167-8191},
1086 issn = {0098-3500},
1087 pages = {11:1--11:27},
1105 pages = {1124--1139},
1134 number = {ANL/MCS-P9031-1117},
1145 booktitle = {HiPCNA-PG’13},
1164 number = {ANL/MCS-P5061-0114},
1175 journal = {arXiv e-preprints},
1183 title = {Optimal checkpointing for adjoint multistage time-stepping schemes},
1185 journal = {arXiv e-preprints},
1193 title = {Revolve-based adjoint checkpointing for multistage time integration},
1203 title = {{PETSc TSAdjoint: A Discrete Adjoint ODE Solver for First-Order and Second-Order
1208 pages = {C1-C24},
1224 author = {R. Y. Jaafar and A Asenjo and O Chubykalo-Fesenko and M Vazquez and E M Gonzalez
1230 doi = {10.1088/0957-4484/19/28/285717},
1240 pages = {50-53},
1260 booktitle = {Intermag 2008 paper no. CM-05, submitted to IEEE Trans. Magn.},
1268 factor for the single-phase soft magnetic films},
1272 pages = {1393-1397},
1278 author = {DENG Lian-wen and HUANG Xiao-zhong and ZH0U Ke-sheng and YANG},
1280 nano-magnetic films},
1283 pages = {756-759},
1294 pages = {50-53},
1300 author = {Ching-Ming Lee and L. X. Ye and J. M. Lee and Te-Ho Wu},
1305 pages = {4049-4052},
1315 doi = {10.1007/978-3-540-74384-2_17},
1321 title = {Magnetic Configurations and Phase Diagrams of sub-100 nm {NiFe} Nanorings},
1325 pages = {2884-2886},
1332 title = {A Systematic Approach to Multiphysics Extensions of Finite-Element-Based
1336 pages = {2896-2898},
1379 author = {J. Fernandez-de-Castro and Xiao Shen and Jianhua Xue and Yuming Zhou and S.
1385 pages = {2175-2177},
1397 pages = {2264--2266},
1429 pages = {2428--2430},
1440 pages = {2960--2962},
1452 pages = {234-238},
1468 author = {I-Hsin Chung and Robert E. Walkup and Hui-Fang Wen and Hao Yu},
1477 author = {I.-H. Chung and J.K. Hollingsworth},
1478 title = {A Case Study Using Automatic Performance Tuning for Large-Scale Scientific
1481 pages = {45--56},
1492 pages = {2670-2672},
1509 title = {Nonlinear Magnetization Dynamics in Thin-Films and Nanoparticles},
1519 url = {http://www.zid.tuwien.ac.at/projekte/2003/03-138-1.html},
1527 booktitle = {Intermag 2006 Conference, San Diego, CA, paper no. EF-03},
1531 @Article{ scholz-batra1,
1541 @Article{ scholz-batra2,
1543 title = {Micromagnetic Modeling of Head Field Rise Time for High Data-Rate Recording},
1547 pages = {702-706},
1551 @Article{ daquino-scholz1,
1555 volume = {290-291},
1557 pages = {510-513},
1561 @Article{ aq-scholz-fid,
1567 pages = {7055-7057},
1571 @InProceedings{ gar-tabik-gar,
1573 title = {Multiprocessing of the Time Domain Analysis of Thin-Wire Antennas and
1575 booktitle = {12th Euromicro Conference on Parallel, Distributed and Network-Based Processing
1578 pages = {80--},
1582 @InProceedings{ aq-scholz-mia,
1587 pages = {257-260},
1591 @Article{ scholz-fid-seus,
1594 title = {Numerical Micromagnetic Simulation of Fe-Pt Nanoparticles with Multiple Easy
1598 pages = {1524-1525},
1602 @Article{ boardman-zimmerman,
1605 title = {Micromagnetic simulation studies of ferromagnetic part-spheres},
1611 @Article{ lim-kim-park,
1619 @Article{ scholz-suess2,
1626 pages = {6807-6809},
1630 @Article{ scholz-schrefl1,
1638 pages = {2920-2922},
1642 @Article{ scholz-guslienko,
1645 title = {Transition from single-domain to vortex state in soft magnetic cylindrical
1650 pages = {155-163},
1660 pages = {366--383},
1689 editor = {Z. Chen and R.E. Ewing and Z.-C. Shi},
1694 pages = {4190-},
1711 grain-boundary properties},
1715 pages = {15--32},
1726 pages = {1271--1297},
1734 title = {Bidimensional Study of the {M}axwell-{B}loch Model in a Nonlinear Crystal},
1738 url = {http://mip.ups-tlse.fr/\~{ }saut/data/sisc04.pdf},
1743 % LiteralHTML: <a name="biology"><H3><center>Biology -- Medical</center></H3>
1746 title = {Simulating Patient Specific Multiple Time-Point {MRIs} from a Biophysical Model
1752 pages = {167--176},
1753 isbn = {978-3-319-28329-6},
1754 doi = {10.1007/978-3-319-28329-6_15},
1761 author = {Y. Ataseven and Z. Akaliota n-Acar and C.~E. Acar and N. G. Gen\c{c}er},
1767 doi = {10.1007/s11517-008-0316-0},
1771 @Article{ dennis-eberhart-03,
1773 pages = {832-840},
1776 title = {Finite-element simulation of cooling of realistic {3-D} human head and neck},
1784 title = {{A parallel reduced-space sequential-quadratic programming algorithm for
1785 frequency-domain small animal optical tomography}},
1795 title = {{Using domain decomposition techniques for the calculation of low-frequency
1796 electric current densities in high-resolution 3D human anatomy models}},
1803 pages = {458--467},
1804 issn = {0332-1649},
1812 pages = {227--231},
1818 url = {http://www.copernicus.org/URSI/ars/3/ars-3-227.pdf},
1824 pages = {309--313},
1836 title = {Computational arterial flow modeling using a parallel {Navier-Stokes} solver},
1844 title = {Parallel Simulation Engines for Whole-Cell Models},
1848 url = {http://www.icsb-2001.org/Posters/110_schwehm2.pdf},
1849 institution = {University of Tubingen, ZBIT - Zentrum fur Bioinformatik Tubingen},
1855 title = {Two-level {N}ewton and hybrid {S}chwarz preconditioners for fluid-structure
1861 pages = {2395--2417},
1868 title = {Scalable parallel methods for monolithic coupling in fluid-structure interaction
1874 pages = {642--659},
1881 title = {{NKS} for fully coupled fluid-structure interaction with application},
1884 pages = {275--282},
1891 author = {Chris Luscombe and Geoff Williams and Jordi Munoz-Muriedas and David J Gavaghan
1898 pages = {88--96},
1920 title = {A scalable multi-level preconditioner for matrix-free $\mu$-finite element
1926 pages = {927--947},
1932 @InProceedings{ adams-04,
1942 @InProceedings{ adams-03b,
1944 title = {Applications of Algebraic Multigrid to Large-Scale Finite Element Analysis of
1945 Whole Bone Micro-Mechanics on the {IBM SP}},
1953 title = {Parallel Multiscale {Gauss-Newton-Krylov} Methods For Inverse Wave Propagation},
1955 url = {http://www-2.cs.cmu.edu/\~{ }oghattas/papers/sc2002.pdf},
1957 by time-dependent PDEs, and scalability results for an inverse wave propagation
1984 title = {A Parallel Dynamic-Mesh {L}agrangian Method for Simulation of Flows with Dynamic
1999 publisher = {Springer-Verlag},
2000 pages = {187--241},
2010 publisher = {Springer-Verlag},
2012 pages = {139--149},
2023 pages = {363--369},
2034 pages = {267--277},
2048 pages = {75--105},
2059 pages = {10--49},
2067 title = {Simulating the blood-muscle-valve mechanics of the heart by an adaptive and
2076 title = {Parallel Algorithms and Software for Time-Dependent System of Nonlinear Partial
2089 pages = {1960--1968},
2099 pages = {69--74},
2108 pages = {571--580},
2111 url = {http://www.ddm.org/DD15/proceedings-dd15.html},
2116 @Article{ franz-pavir-04,
2118 title = {A parallel solver for reaction-diffusion systems in computational
2124 pages = {883--912},
2128 @Article{ franz-pavir-05,
2136 pages = {35--66},
2140 @Article{ franz-pavir-06,
2149 pages = {132--165},
2153 @InProceedings{ colli-franz-sim,
2154 author = {P. Colli-Franzone and L.F. Pavarino and B. Taccardi},
2158 url = {http://cluster.mat.unimi.it/doc/Progetti/Pavarino-LF.pdf},
2165 title = {Parallel Solution of Cardiac Reaction-Diffusion Models},
2168 pages = {669--776},
2171 url = {http://www.ddm.org/DD15/proceedings-dd15.html},
2176 @Article{ maria-is04,
2177 author = {Maria Murillo and Xiao-Chuan Cai},
2178 title = {A fully implicit parallel algorithm for simulating the non-linear electrical
2183 pages = {261 - 277},
2184 url = {http://www3.interscience.wiley.com/cgi-bin/abstract/107632540/ABSTRACT},
2189 title = {{Monitoring and Migration of a PETSc-based Parallel Application for Medical
2193 journal = {Grid-Based Problem Solving Environments},
2194 pages = {421--432},
2203 study in {3-D} echocardiography},
2209 issn = {0167-8191},
2210 pages = {67--83},
2224 journal = {Integrated Computer-Aided Engineering },
2227 pages = {365 - 378},
2230 issn = {1875-8835},
2231 doi = {10.3233/ICA-2011-0382},
2243 booktitle = {Euro-Par 2009 Parallel Processing},
2246 pages = {747-759},
2248 editor = {H. Sips and D. Epema and H.-X. Lin},
2266 pages = {3--22},
2278 the Institute for Computational Engineering and Sciences (ICES) at UT-Austin,
2281 state-of-the-art thermal imaging technology, and advanced computational methods,
2282 dynamic, data-driven treatments are being pursued as a minimally invasive
2291 title = {Nanoshell-Mediated Laser Surgery Simulation for Prostate Cancer Treatment},
2304 title = {Computational Infrastructure for the Real-Time Patient-Specific Treatment of
2318 pages = {2955--2947},
2325 title = {A Dynamic Data Driven Grid System for Intra-Operative Image Guided Neurosurgery},
2327 pages = {672--679},
2333 @Conference{ sermesant-etal:03,
2336 title = {A parallel implementation of non-rigid registration using a volumetric
2340 publisher = {Springer-Verlag},
2344 pages = {398-407},
2345 date = {june 23-24},
2347 url = {ftp://ftp-sop.inria.fr/epidaure/Publications/Sermesant/WBIR2003Sermesant.pdf},
2351 @Conference{ sermesant-etal:04,
2355 booktitle = {Medical Image Computing and Computer-Assisted Intervention - MICCAI 2001},
2357 publisher = {Springer-Verlag},
2367 @Article{ warfield-haker-talos-05,
2368 author = {Simon K. Warfield and Steven J. Haker and Ion-Florin Talos and Corey A. Kemper
2369 and Neil Weisenfeld and Andrea U.J. Mewes and Daniel Goldberg-Zimring and Kelly H.
2370 Zou and Carl-Fredrik Westin and William M. Wells and Clare M.C. Tempany and
2375 url = {http://splweb.bwh.harvard.edu:8000/pages/papers/warfield/capturing-intraoperative-deformations-MIA2005.pdf},
2383 title = {Real-Time Registration of Volumetic Brain {MRI} by Biomechanical Simulation of
2386 url = {http://splweb.bwh.harvard.edu:8000/pages/ppl/warfield/papers/2002/warfield-2002-cvs-appeared.pdf},
2405 title = {Real-Time Biomechanical Simulation of Volumetric Brain Deformation for Image
2416 title = {Parallelized {B}ayesian inversion for three-dimensional dental {X}-ray imaging},
2422 pages = {218--228},
2433 doi = {10.1115/IMECE2015-53579},
2443 pages = {163--174},
2466 title = {Runaway Electron Generation with High-Performance, Structure Preserving
2467 Discretization of {F}okker--{P}lank--{L}andau},
2481 pages = {C452--C465},
2494 pages = {C310--C319},
2512 title = {Implementation of higher-order velocity mapping between marker particles and grid
2513 in the particle-in-cell code {XGC}},
2538 title = {Radially global delta-f computation of neoclassical phenomena in a tokamak
2546 @Article{ facets-scidac08,
2547 title = {First Results from Core-Edge Parallel Composition in the {FACETS} Project},
2551 S. Shasharina and D. Wade-Stein and N. Wang and S. Balay and L. McInnes and H.
2559 url = {http://www.iop.org/EJ/abstract/1742-6596/125/1/012040},
2563 @Article{ facets-scidac09,
2568 and M. Miah and A. Pletzer and S. Shasharina and S. Vadlamani and D. Wade-Stein
2575 url = {http://iopscience.iop.org/1742-6596/180/1/012056},
2579 @InProceedings{ facets-scidac10,
2585 Miah and A. Pletzer and S. Shasharina and S. Vadlamani and D. Wade-Stein and T.
2594 @InProceedings{ facets-fec2010,
2595 title = {Concurrent, Parallel, Coupled Core-Edge Simulations of Pedestal Formation Using
2606 @InProceedings{ facets-epdp2010,
2612 Parallel, Distributed and Network-Based Computing), Pisa, Italy},
2619 title = {The hypersecant {J}acobian approximation for quasi-{N}ewton solves of sparse
2643 convection-induced discontinuities and absence of finite-time singularities},
2678 pages = {237--243},
2708 title = {Global gyrokinetic Particle-in-cell Simulations with Trapped Electrons},
2718 title = {Electromagnetic gyrokinetic simulation with a fluid-kinetic hybrid electron
2729 title = {Numerical studies of a steady state axisymmetric co-axial helicity injection
2733 pages = {171--185},
2754 number = {PPPL-3532},
2755 url = {http://www.pppl.gov/pub_report/2001/PPPL-3532.pdf},
2758 March 12-14, 2001.},
2768 title = {Parallel Implementation of a {PETSc-Based} Framework for the General Curvilinear
2773 article-number= {185},
2774 url = {https://www.mdpi.com/2077-1312/7/6/185},
2775 issn = {2077-1312},
2787 pages = {1--11},
2799 pages = {77--90},
2811 pages = {2213--2238},
2824 pages = {140--177},
2830 title = {Modular and flexible spectral-element waveform modelling in two and three
2837 pages = {1675--1692},
2851 pages = {C127--C153},
2859 title = {High-order accurate entropy-stable discontinuous collocated {G}alerkin methods with
2860 the summation-by-parts property for compressible {CFD} frameworks: Scalable {SSDC}
2867 issn = {0021-9991},
2877 author = {I. Ambartsumyan and W. Bouakaram and Than Bui-Thanh and Omar Ghattas and David
2882 pages = {A3397--A3426},
2887 title = {H2Opus: a distributed memory {multi-GPU} software for non-local operators},
2907 title = {Hybrid simulations of coupled {F}arley-{B}uneman/gradient drift instabilities in the
2912 issn = {2169-9402},
2914 pages = {5768--5781},
2920 title = {Three-dimensional multifluid modeling of atmospheric electrodynamics in {M}ars'
2927 pages = {3647--3659},
2936 author = {Chien, Mu-Hua and Wu, Chien-Ming},
2945 author = {Berger-Vergiat, Luc and McAuliffe, Colin and Waisman, Haim},
2953 title = {A scalable, matrix-free multigrid preconditioner for finite element
2958 pages = {496--523},
2960 issn = {0045-7825},
2967 title = {Support for Non-conformal Meshes in {PETSc}'s {DMPlex} Interface},
2969 journal = {ArXiv e-prints},
2979 journal = {ArXiv e-prints},
2987 title = {Efficient mesh management in {Firedrake} using {PETSc-DMPlex}},
2992 pages = {S143--S155},
3010 title = {Parallel Metric-Based Mesh Adaptation in {PETSc} using {ParMmg}},
3017 pages = {1--5},
3040 pages = {1--22},
3041 issn = {0098-3500},
3055 pages = {B1018--B1044},
3065 pages = {A1555--A1582},
3070 title = {Bijective and coarse high-order tetrahedral meshes},
3075 pages = {1--16},
3080 title = {Monolithic multigrid for implicit {Runge--Kutta} discretizations of incompressible fluid flow},
3081 author = {Abu-Labdeh, Razan and MacLachlan, Scott and Farrell, Patrick E},
3089 title = {{Irksome}: Automating {Runge--Kutta} time-stepping for finite element methods},
3090 author = {Farrell, Patrick E and Kirby, Robert C and Marchena-Menendez, Jorge},
3094 pages = {1--26},
3099 title = {An augmented Lagrangian preconditioner for implicitly constituted non-Newtonian incompressible flow},
3100 author = {Farrell, Patrick E and Gazca-Orozco, Pablo Alexei},
3104 pages = {B1329--B1349},
3114 pages = {3306--3329},
3120 author = {Shih, Yu-hsuan and Stadler, Georg and Wechsung, Florian},
3124 pages = {S27--S53},
3129 title = {Monolithic multigrid for a reduced-quadrature discretization of poroelasticity},
3134 pages = {S54--S81},
3139 title = {Augmented Lagrangian preconditioners for the Oseen--Frank model of nematic and cholesteric liquid crystals},
3143 pages = {607--644},
3148 title = {Algebraic multigrid methods for metric-perturbed coupled problems},
3149 author = {Budisa, Ana and Hu, Xiaozhe and Kuchta, Miroslav and Mardal, Kent-Andre and Zikatanov, Ludmil Tomov},
3155 title = {Structure-preserving and helicity-conserving finite element approximations and preconditioning for the Hall MHD equations},
3164 title = {Robust approximation of generalized Biot-Brinkman problems},
3165 author = {Hong, Qingguo and Kraus, Johannes and Kuchta, Miroslav and Lymbery, Maria and Mardal, Kent-Andr{\'e} and Rognes, Marie E},
3174 title = {Robust preconditioners for perturbed saddle-point problems and conservative discretizations of {Biot's} equations utilizing total pressure},
3175 author = {Boon, Wietse M and Kuchta, Miroslav and Mardal, Kent-Andre and Ruiz-Baier, Ricardo},
3179 pages = {B961--B983},
3184 title = {Preconditioners for computing multiple solutions in three-dimensional fluid topology optimization},
3189 pages = {B853--B883},
3194 title = {A new mixed finite-element method for H2 elliptic problems},
3198 pages = {300--319},
3203 title = {Compression and Reduced Representation Techniques for Patch-Based Relaxation},
3214 pages = {212--227},
3226 title = {Preconditioned iterative methods for optimal control problems with time-dependent PDEs as constraints},
3233 title = {Optimal-complexity and robust multigrid methods for high-order FEM},
3250 Fabio Luporini and Andrew TT McRae and Gheorghe-Teodor Bercea and Graham R Markall
3266 pages = {1--18},
3274 author = {Andrew TT McRae and Gheorghe-Teodor Bercea and Lawrence Mitchell and David A Ham
3279 pages = {S25--S47},
3285 title = {A structure-exploiting numbering algorithm for finite elements on extruded
3287 author = {Gheorghe-Teodor Bercea and Andrew TT McRae and David A Ham and Lawrence Mitchell
3292 pages = {3803--3815},
3293 doi = {10.5194/gmd-9-3803-2016},
3302 title = {Performance-Portable Finite Element Assembly Using {PyOP2} and {FEniCS}},
3305 pages = {279--289},
3306 isbn = {978-3-642-38750-0},
3307 doi = {10.1007/978-3-642-38750-0_21},
3325 journal = {Oil and Gas Science and Technology-Revue de l'IFP-Institut Francais du Petrole},
3335 title = {Influences of surface processes on fold growth during {3-D} detachment folding},
3362 of the modern {India-Asia} collisional system with {3-D} numerical models},
3363 journal = { Journal of Geophysical Research - Solid Earth},
3372 editor = {Pardo-Ig\'uzquiza E. and Guardiola-Albert C. and Heredia J. and Moreno-Merino L.
3373 and Dur\'an J.J. and Vargas-Guzman J.A.},
3379 @Article{ hossein-hsueh-etal-2014a,
3380 author = {Hossein, M.Z. and Hsueh, C.-J. and Bourdin, B. and Bhattacharya, K.},
3382 pages = {320--348},
3389 @Unpublished{ leon-baldelli-bourdin-2014a,
3393 title = {On the asymptotic derivation of Winkler-type energies from {3D} elasticity},
3398 @Article{ leon-baldelli-babadjian-etal-2013a,
3399 author = {Leòn-Baldelli, A. A. and Babadjian, J.-F. and Bourdin, B. and Henao, D. and
3402 pages = {15-32},
3409 @Article{ mesgarnejad-bourdin-etal-2014a,
3418 @InProceedings{ bourdin-chukwudozie-etal-2013a,
3423 Fracturing Under In-Situ Stresses},
3428 @Article{ maurini-bourdin-etal-2012a,
3431 number = {1-2},
3432 pages = {75-91},
3434 capillary tube: experiments and numerical simulations using a two-dimensional
3441 @Article{ mesgarnejad-bourdin-etal-2013a,
3445 pages = {2360--2379},
3453 @InProceedings{ bourdin-chukwudozie-etal-2012a,
3470 pages = {405--437},
3473 issn = {0309-1708},
3484 pages = {1539-1558},
3486 issn = {1616-7341},
3487 doi = {10.1007/s10236-010-0356-5},
3488 publisher = {Springer-Verlag},
3501 pages = {3226--3230},
3502 doi = {10.1190/segam2013-0244.1},
3503 url = {http://library.seg.org/doi/abs/10.1190/segam2013-0244.1},
3504 eprint = {http://library.seg.org/doi/pdf/10.1190/segam2013-0244.1},
3521 title = {Comparing thin-sheet models with {3-D} multilayer models for continental
3525 pages = {10--33},
3527 doi = {10.1111/j.1365-246X.2011.05164.x},
3535 title = {Multiple-domain, simultaneous joint inversion of geophysical data with
3542 pages = {R69-R80},
3557 pages = {806-810},
3569 pages = {161--177},
3578 title = {Numerical Simulation of Reservoir Stimulation - A Variational Approach},
3591 url = {https://www.math.lsu.edu/~bourdin/Biography_assets/Bourdin-Knepley-Maurini-2010.pdf},
3592 note = {\url{https://www.math.lsu.edu/~bourdin/Biography_assets/Bourdin-Knepley-Maurini-2010.pdf}},
3614 title = {Efficient Nonlinear Solvers for Nodal High-Order Finite Elements in {3D}},
3617 issn = {0885-7474},
3619 pages = {48-63},
3622 doi = {10.1007/s10915-010-9396-8},
3642 pages = {359--375},
3644 note = {Also preprint ANL/MCS-P743-1298},
3650 title = {Low-rank quasi-{N}ewton updates for robust {J}acobian lagging in {N}ewton-type
3655 pages = {2554--2565},
3659 @Misc{ spiegelman-siampp10,
3671 Quintana-Ort\'{\i}},
3677 pages = {75--93},
3717 title = {Consequences of mantle heterogeneity for melt extraction at mid-ocean ridges},
3721 volume = {335-336},
3722 pages = {226-237},
3728 title = {Porosity-driven convection and asymmetry beneath mid-ocean ridges},
3743 pages = {700--703},
3750 title = {Plate-Driven Mantle Dynamics and Global Patterns of Mid-Ocean Ridge Bathymetry},
3761 title = {The stability of ice-sheet grounding lines},
3765 pages = {1597--1620},
3772 title = {Stress balances of ice streams in a vertically integrated, higher-order
3774 author = {Kyrke-Smith, T.M. and Katz, R.F. and Fowler, A.C.},
3778 pages = {449--466},
3786 title = {{Consequences of viscous anisotropy in a deforming, two-phase aggregate: 1.
3791 pages = {424-455},
3798 title = {{Consequences of viscous anisotropy in a deforming, two-phase aggregate: 2.
3803 pages = {456-485},
3808 @Article{ kyrke-smith2014subglacial,
3809 author = {Kyrke-Smith, T.M. and R.F. Katz and A.C. Fowler},
3822 multi-physics problems in the solid Earth sciences}},
3838 journal = {Journal of Geophysical Research-Earth Surface},
3853 pages = {499--516},
3859 title = {{Fast computation of a viscoelastic deformable Earth model for ice-sheet
3864 pages = {97--105},
3870 author = {Ed Bueler and Craig S. Lingle and Jed A. Kallen-Brown and David N. Covey and
3876 pages = {291--306},
3883 author = {Chao-fan, Z. and Yao-lin, S.},
3891 Luddens, F. and Guermond, J.-L. and Aubert, J. and Takehiro, S. and Sasaki, Y. and
3892 Hayashi, Y.-Y. and Simitev, R. and Busse, F. and Vantieghem, S. and Jackson, A.},
3906 Field-Programmable Custom Computing Machines},
3908 pages = {230--},
3910 isbn = {978-0-7695-4969-9},
3922 title = {A highly-efficient and green data flow engine for solving {E}uler atmospheric
3926 pages = {1-6},
3931 %Aagaard, B., Williams, C., Knepley, M. (2011). PyLith: A finite-element code for modeling quasi-static and dynamic crustal deformation (abstract), EarthScope National Meeting, Austin, Texas, May 17–20.
3932 %Aagaard, B., Williams, C., and Knepley, M. (2011). PyLith: A finite-element code for modeling quasi-static and dynamic crustal deformation (abstract), Southern California Earthquake Center Annual Meeting, Palm Springs, California, September 11–14.
3933 %Aagaard, B., Williams, C., and Knepley, M. (2012). PyLith: A Finite-Element Code for Modeling Quasi-Static and Dynamic Crustal Deformation (abstract), Seismological Society of America Annual Meeting, San Diego, California, April 17-19.
3935 title = {A Domain Decomposition Approach to Implementing Fault Slip in Finite-Element
3936 Models of Quasi-static and Dynamic Crustal Deformation},
3941 pages = {3059--3079},
3942 issn = {2169-9356},
3944 keywords = {fault slip, finite-element modeling, crustal deformation, earthquake physics},
3951 title = {{PyLith}: A Finite-Element Code for Modeling Quasi-Static and Dynamic Crustal
3955 note = {Fall Meeting Supplemental, Abstract DI14A-08},
3965 note = {Fall Meeting Supplemental, Abstract IN44A-01},
3975 note = {Fall Meeting Supplemental, Abstract P31A-A1241},
3985 note = {Fall Meeting Supplemental, Abstract DI22A-05},
3992 title = {{PyLith}: A Finite-Element Code for Modeling Quasi-Static and Dynamic Crustal
3998 note = {Fall Meeting Supplemental, Abstract T41A-1925},
4005 title = {{PyLith}: A Finite-Element Code for Modeling Quasi-Static and Dynamic Crustal
4011 note = {Fall Meeting Supplemental, Abstract T21B-1798},
4019 temporal scales by coupling quasi-static and dynamic simulations},
4024 note = {Fall Meeting Supplemental, Abstract S53A-1072},
4046 number = {ANL/MCS-P1459-0907},
4056 focusing at mid-ocean ridges},
4060 pages = {2099--2121},
4071 pages = {1958--1963},
4081 number = {1-4},
4082 pages = {33--47},
4086 issn = {0031-9201},
4100 pages = {12--20},
4107 marker-in-cell method for applied geodynamics: A numerical study},
4123 pages = {8835--8851},
4135 pages = {1406--1442},
4147 pages = {308--311},
4160 pages = {38--54},
4166 title = {Influence of trench width on subduction hinge retreat rates in {3-D} models of slab
4178 title = {{pTatin3D}: {H}igh-performance methods for long-term lithospheric dynamics},
4183 pages = {274--284},
4190 title = {A scalable, matrix-free multigrid preconditioner for finite element
4195 pages = {496--523},
4208 pages = {1518--1530},
4215 title = {Analysis of block-preconditioners for models of coupled magma/mantle dynamics},
4218 pages = {A1960--A1977},
4226 formation in a {H}ele-{S}haw cell},
4229 pages = {9823-9840},
4242 pages = {1990--2008},
4252 pages = {676--679},
4263 booktitle = {Large-Scale Scientific Computing: 4th International Conference, LSSC 2003,
4264 Sozopol, Bulgaria, June 4-8, 2003},
4271 title = {{PFLOTRAN}: Massively Parallel {3-D} Simulator for {CO2} Sequestration in
4285 pages = {208--228},
4297 pages = {295--318},
4302 @Article{ kees-miller-03,
4308 pages = {91--114},
4318 pages = {310-318},
4324 permafrost-associated gas hydrate on the circum-Arctic continental shelf},
4329 pages = {1383--1404},
4330 issn = {2169-9356},
4351 publisher = {Springer-Verlag},
4352 url = {http://vpac.org/VDT/SNARK/Presentations/RD0201-paper-20030602-ICCS03_ACES03_LNCS-mantle_convection_modelling.pdf},
4389 isbn = {978-3-540-31619-0},
4391 pages = {413-438},
4393 doi = {10.1007/3-540-31619-1_12},
4401 the global mid-ocean ridge system},
4416 pages = {52--68},
4435 volume = {236/1-2},
4436 pages = {505-523},
4444 title = {Towards Rapid Geoscience Model Development - The {Snark} Project},
4450 author = {Bill Appelbe and David May and Louis Moresi and Steve Quenette and Siew-Chiang
4452 title = {Snark - A Reusable Framwork for Geoscience Computational Models},
4474 pages = {491--495},
4499 pages = {125-150},
4500 title = {A finite-element Ocean Model: Principles and Evaluation},
4501 url = {http://www.sciencedirect.com/science?_ob=IssueURL&_tockey=%23TOC%236214%232004%23999939997%231%23FLA%23Volume_6,_Issue_2,_Pages_101-190_(2004)&_auth=y&view=c&_acct=C000007278&_version=1&_urlVersion=0&_userid=97338&md5=c3a50a31c599d8d38c8ce1f29117f267},
4508 title = {Evaluation of an eddy-permitting finite-element ocean model in the {N}orth
4524 title = {{A self-adaptive finite element model of the atmosphere}},
4528 High Performance Computing in Meteorology: Reading, UK, 4-8 November, 2002},
4541 journal = {Berichte zur Polar- und Meeresforschung},
4569 pages = {185--191},
4573 @Article{ 0266-5611-24-3-034015,
4575 title = {A {N}ewton-{CG} method for large-scale three-dimensional elastic full-waveform
4581 url = {http://stacks.iop.org/0266-5611/24/034015},
4583 abstract = {We present a nonlinear optimization method for large-scale 3D elastic
4584 full-waveform seismic inversion. The method combines outer Gauss-Newton nonlinear
4588 to prevent oversolving, preconditioned by L-BFGS/Frankel, regularized by a total
4591 implemented in matrix-free fashion with adjoint-based computation of reduced
4592 gradient and reduced Hessian-vector products, checkpointed to avoid full spacetime
4595 gradient-like information. Several numerical examples demonstrate the grid
4606 % LiteralHTML: <a name="environmental"><H3><center>Environmental -- Subsurface Flow</center></H3>
4618 title = {Modeling subsurface reactive flows using leadership-class computing},
4642 title = {Modeling subsurface reactive flows using leadership-class computing},
4655 porous media using the preconditioned {J}acobian-{F}ree {N}ewton-{K}rylov Method
4660 pages = {101 - 108},
4663 issn = {0309-1708},
4667 keywords = {Reactive transport, Jacobian-Free Newton-Krylov, Physics-based block
4689 @InProceedings{ hulchy-tran-astalos-fmsip,
4702 title = {High-Performance Simulation of Surface-Subsurface Coupled Flow and Reactive
4711 title = {{An efficient parallel method for large-scale groundwater flow equation based on
4714 booktitle = {Information, Computing and Telecommunication, 2009. YC-ICT'09. IEEE Youth
4716 pages = {190--193},
4733 title = {Dynamic data driven inversion for terascale simulations: real-time
4740 url = {http://www.cs.cmu.edu/\~{ }oghattas/papers/sc05-inverse.pdf},
4745 @InProceedings{ anton-krassimir-lscc,
4749 booktitle = {Large-Scale Scientific Computing: 4th International Conference, LSSC 2003},
4752 publisher = {Springer-Verlag},
4759 title = {Object-Oriented Framework for Large Scale Air Pollution Modeling},
4761 booktitle = {Large-Scale Scientific Computing : Third International Conference, LSSC 2001,
4769 @Article{ grassley-simmons-kercher-00,
4776 pages = {699--708},
4780 @Article{ glassey-nitao-03,
4785 long-term monitoring},
4788 pages = {399-411},
4793 @Article{ steefel-depaolo-lichtner-05,
4810 title = {A General-Purpose Hierarchical Mesh Partitioning Method with Node Balancing
4811 Strategies for Large-Scale Numerical Simulations},
4815 Large-Scale Systems (scalA)},
4816 pages = {65-72},
4828 pages = {1033--1047},
4831 url = {http://www.sciencedirect.com/science?_ob=ArticleURL&_udi=B6V28-4FPDPWM-1&_user=1722207&_rdoc=1&_fmt=&_orig=search&_sort=d&_docanchor=&view=c&_acct=C000053990&_version=1&_urlVersion=0&_userid=1722207&md5=89d48cd6fd5e80989372246d8dda400f},
4849 school = {University of Illinois at Urbana-Champaign},
4856 title = {Parallel Least-Squares Finite Element Method for Large Eddy Simulation of Large
4868 {J}acobian-Free {N}ewton {K}rylov with Operator-Split Preconditioners},
4882 number = {UCRL-MA-143182},
4889 title = {A coupled model for transport of multiple chemical-species and kinetic
4891 single-phase hydrothermal systems},
4894 pages = {529-592},
4902 title = {{OS3D/GIMRT}, Software for Multicomponent-Multidimensional reactive transport:
4906 number = {PNNL-11166},
4913 title = {Application of {J}acobian-free {N}ewton-{K}rylov with physics-based
4917 pages = {359--376},
4920 http://www.sciencedirect.com/science?_ob=IssueURL&_tockey=%23TOC%235953%232005%23999719995%23576651%23FLA%23Volume_28,_Issue_4,_Pages_315-427_(April_2005)&_auth=y&view=c&_acct=C000059129&_version=1&_urlVersion=0&_userid=2914253&md5=0d485527443c6192356cc508e1621002},
4925 @Article{ wang-zabar-05,
4940 publisher = {Springer-Verlag},
4951 pages = {32-+},
4962 pages = {247--258},
4968 title = {A parallel {RMA2} model for simulating large-scale free surface flows},
4971 pages = {47--53},
4988 title = {Modeling Thermal-Hydrological-Chemical ({THC}) Coupled Processes with
4994 note = {Also Los Alamos National Laboratory report: LA-UR-04-1826},
5000 @Article{ aba01:petsc-app,
5007 pages = {13--21},
5025 note = {Paper number CIPC2006-207},
5037 note = {also available as Argonne preprint ANL/MCS-P743-1298},
5047 title = {A {Reynolds-robust} preconditioner for the {Scott-Vogelius} discretization of the
5048 stationary incompressible {Navier-Stokes} equations},
5053 pages = {75--96},
5064 pages = {S70--S91},
5073 Oyar\'ua and Ricardo Ruiz-Baier},
5077 issn = {0045-7825},
5086 {Navier-Stokes} equations at high {Reynolds} number},
5092 pages = {A3073-A3096},
5098 title = {Block-preconditioners for the incompressible {Navier}--{Stokes} equations
5104 pages = {89--105},
5110 title = {Newton--Krylov methods in applications of two-phase flow problems with phase
5123 author = {Guermond, J-L and Laguerre, Raphael and L{\'e}orat, Jacques and Nore, Caroline},
5127 pages = {2739--2757},
5139 pages = {90--110},
5146 title = {A parallel monolithic algorithm for the numerical simulation of large-scale fluid
5158 author = {Feng-Nan Hwang and Yi-Cheng Su and Xiao-Chuan Cai},
5162 pages = {96--107},
5169 title = {Nonlinear Preconditioning Techniques for Full-Space {L}agrange--{N}ewton Solution of
5170 {PDE}-Constrained Optimization Problems},
5171 author = {Haijian Yang and Feng-Nan Hwang and Xiao-Chuan Cai},
5175 pages = {A2756--A2778},
5183 hybrid Lattice-{B}oltzmann and finite element method},
5186 pages = {1379--1395},
5206 pages = {191--203},
5213 title = {Fluid-Structure Interaction for an Elastic Structure Interacting with Free
5216 pages = {201--212},
5223 title = {Bubble size distribution prediction for large-scale ship flows: {Model}
5226 pages = {131--150},
5236 pages = {166--181},
5246 pages = {403--433},
5253 title = {Overset simulations of a {Submarine} in {Towed}, {Self}-{Propelled} and
5256 pages = {171--205},
5262 author = {H. Sadat-Hosseini and P. -C. Wu and P. M. Carrica and H. Kim and Y. Toda and F.
5268 pages = {240--273},
5275 title = {{CFD} Simulations of a Submarine Propeller and Application to Self-Propulsion of a
5278 pages = {68--80},
5284 author = {P. M. Carrica and H. Sadat-Hosseini and F. Stern},
5288 pages = {117--132},
5295 title = {{URANS} Simulations of Static and Dynamic Maneuvering for Surface Combatant-Part 1:
5298 pages = {422--445},
5305 title = {{URANS} Simulations of Static and Dynamic Maneuvering for Surface Combatant-Part 2:
5308 pages = {446--468},
5317 pages = {285--298},
5326 pages = {160--180},
5333 title = {A geometry-based level set method for curvilinear overset grids with application
5336 pages = {494--521},
5343 title = {Computations of self-propulsion free to sink and trim and of motions in head
5346 pages = {309--320},
5354 Using {CFDShip}-Iowa},
5356 pages = {466--487},
5363 title = {Full scale self-propulsion computations using discretized propeller for the
5366 pages = {35--47},
5374 title = {Multi-fidelity Optimization of a High-speed Foil-assisted Semi-planing {C}atamaran
5377 pages = {143--156},
5385 title = {{CFD} Validation Studies for a High-speed Foil-assisted Semi-planing {C}atamaran},
5387 pages = {157--167},
5393 author = {H. Sadat-Hosseini and P. M. Carrica and F. Stern and N. Umeda and H. Hashimoto
5395 title = {{CFD} System-Based and {EFD} Study of Ship Dynamic Instability Events: Surf Riding,
5398 pages = {88--110},
5405 title = {Development and Validation of Harmonic Wave Group Single-Run Procedure for {RAO}
5409 pages = {653--666},
5417 title = {Large-Scale {DES} Computations of the Forward Speed Diffraction and Pitch and
5420 pages = {1095--1111},
5427 title = {Self-Propulsion Computations Using Speed Controller and Discretized Propeller
5430 pages = {316--330},
5437 title = {Evaluation of Linear and Non-Linear Convection Schemes on Multidimensional
5438 Non-Orthogonal Grids with Applications to {KVLCC}2 Tanker},
5440 pages = {850--886},
5456 title = {{Modeling hypersonic entry with the fully-implicit {N}avier--{S}tokes (FIN-S)
5462 pages = {281--292},
5468 title = {Computational simulations of {3D} large-scale time-dependent viscoelastic flows
5470 journal = {Journal of Non-Newtonian Fluid Mechanics },
5472 number = {23--24},
5473 pages = {1382--1395},
5475 issn = {0377-0257},
5479 keywords = {Parallel computations, Viscoelastic flows, DEVSS-G, \{PETSc\}, Finite element
5485 author = {Bungartz, Hans-Joachim and Gatzhammer, Bernhard and Lieb, Michael and Mehl,
5487 title = {Towards multi-phase flow simulations in the PDE framework Peano},
5491 pages = {365-376},
5493 issn = {0178-7675},
5494 doi = {10.1007/s00466-011-0626-1},
5495 publisher = {Springer-Verlag},
5496 keywords = {PDE framework; Octree-like Cartesian grids; Computational fluid dynamics;
5497 Thermohydraulics; Two-phase flow},
5510 pages = {1--18},
5517 title = {Parallel unstructured three-dimensional turbulent flow analyses using efficiently
5518 preconditioned newton-krylov solver},
5532 pages = {179-189},
5547 isbn = {978-3-540-69777-0},
5548 pages = {151-158},
5549 doi = {10.1007/978-3-540-69777-0_17},
5558 title = {EulFS: A Parallel {CFD} Code for the Simulation of {Euler and Navier-Stokes}
5564 isbn = {978-3-540-75754-2},
5565 pages = {676-685},
5567 doi = {10.1007/978-3-540-75755-9_83},
5589 pages = {307--327},
5596 title = {Variational Space-time (Dis)continuous {G}alerkin Method for Linear Free Surface
5615 title = {A MULTILEVEL FINITE VOLUME METHOD WITH MULTISCALE-BASED GRID ADAPTATION FOR
5619 url = {http://www.numerical.rl.ac.uk/people/marioli/Archives/ECCOMAS-CFD-2006/documents/197.pdf},
5625 title = {Parallel three-dimensional simulation of the injection molding process},
5644 journal = {Numerical Heat Transfer, part B-Fundamentals},
5647 pages = {507--529},
5670 }rdwight/pub/rdwight-ICCFD4-LinElastDeformation-2006.pdf},
5676 title = {Effect of Various Approximations of the Discrete Adjoint on Gradient-Based
5679 AIAA-2006-0690},
5681 url = {http://www.maths.man.ac.uk/\~{ }rdwight/pub/rdwight-AIAAReno-ApproxAdjoint.pdf},
5687 title = {Efficiency Improvements of {RANS}-Based Analysis and Optimization using Implicit
5692 }rdwight/pub/rdwight-PhDThesis-ImplicitAndAdjoint.pdf},
5699 title = {An adaptive Lagrange-Galerkin shallow-water model on the sphere},
5701 March, 10-14, 2003, Munich University of Technology, German},
5706 @InProceedings{ brios-ying-2002,
5709 {Navier-Stokes} equations},
5715 @InProceedings{ mohsen-straatman-ins,
5718 {Navier-Stokes} equation on a cluster of distributed-memory computers},
5721 pages = {11--16},
5727 @TechReport{ bonglioli-icnmfd98,
5728 title = {Multidimensional Residual Distribution Schemes for the Pseudo-Compressible
5729 {Euler} and {Navier-Stokes} equations on Unstructured Meshes},
5737 @Article{ deng-piquet-ctf,
5742 pages = {445--472},
5762 note = {Paper No. 2005-1386},
5768 title = {An unsteady single-phase level set method for viscous free surface flows},
5773 pages = {229--256},
5775 publisher = {Chichester; New York: Wiley, c1981-},
5781 title = {A Multidimensional Two-Phase Flow Model for the Total Dissolved Gas Downstream of
5811 title = { Large-Scale {DES} Computations of the Forward Speed Diffraction and Pitch and
5817 pages = {1095--1111},
5824 title = {Toward Large-Scale Computations of Ship Motions with Dynamic Overset Curvilinear
5842 title = {Detached-Eddy Simulation of High Reynolds Number Beveled-Trailing-Edge Flows and
5861 title = {Computation of Maneuvering Coefficients for Non-Body-of-Revolution Submarines
5880 refinement grids and detached-eddy simulation},
5888 title = {Experimental and Computational Study of Cavitation Inception on Co-Flow Nozzles},
5896 title = {A Physics-Based Simulation Methodology for Predicting Trailing-Edge Singing},
5904 title = {Detached-Eddy Simulation of High Reynolds Number Trailing-Edge Flows and Wakes},
5921 title = {RANS and Detached-Eddy Simulation of the NCCR airfoil},
5929 title = {Simulation of Steady and Pulsed Circulation Controlfor Marine-Vehicle Control
5950 pages = {397--400},
5956 title = {Computing high-Reynolds number vortical flows: a highly accurate method with a
5975 title = {Experimental Validation of 3-D Lagrangian VOF Model: Bubble Shape and Rise
5991 institution = {Dipartimento Interuniversitario di Matematica Universiti degli Studi-Politecnico
6000 title = {Higher Order Time Integration Methods for Two-Phase Flow},
6005 pages = {159-177.},
6022 Solid-Liquid Mixture Flows},
6025 pages = {281--287},
6036 pages = {333-344},
6048 pages = {226--237},
6054 title = {Globalized {N}ewton-{K}rylov-{S}chwarz Algorithms and Software for Parallel
6060 pages = {102-136},
6064 @InProceedings{ agkks-sc99,
6083 pages = {337-362},
6084 url = {http://www.mcs.anl.gov/petsc-fun3d/Papers/manke.pdf},
6088 @Article{ cristea-sofonea-02,
6107 pages = {59--64},
6118 pages = {382--396},
6122 @Article{ sofnea-lamura1,
6124 title = {Finite-difference lattice Boltzmann model with flux limiters for liquid-vapor
6130 pages = {046702-1 / 046702-9},
6136 title = {Latency, Bandwidth, and Concurrent Issue Limitations in High-Performance {CFD}},
6143 url = {http://www.mcs.anl.gov/petsc-fun3d/Papers/mit01.pdf},
6156 pages = {395--404},
6157 url = {http://www.mcs.anl.gov/petsc-fun3d/Papers/hipc00.pdf},
6161 @InProceedings{ gkks-sc00,
6168 url = {http://www.mcs.anl.gov/petsc-fun3d/Papers/sc00.pdf},
6182 @InProceedings{ gkks-pcfd99,
6195 title = {On the Interaction of Architecture and Algorithm in the Domain-Based
6200 pages = {311--319},
6209 title = {{N}ewton-{K}rylov-{S}chwarz Methods for Aerodynamic Problems: Compressible and
6213 editors = {C.-H. {Lai et al.}},
6226 pages = {1079--1096},
6249 editor = {Tromeur-Dervout et. al.},
6255 author = {F.-N. Hwang and X.-C. Cai},
6257 for incompressible {Navier-Stokes} equations},
6261 pages = {666--691},
6267 title = {Emergence and evolution of tripole vortices from net-circulation initial
6279 title = {Non-shielded multipolar vortices at high Reynolds number},
6289 title = {Multi-material incompressible flow simulation using the moment-of-fluid method},
6295 pages = {931--952},
6305 % LiteralHTML: author = {Ji Wng and Yu Wang and Wen-ke Hu and Jian-ke Du},
6314 pages = {549--560},
6315 issn = {1432-0924},
6316 doi = {10.1007/s00466-013-0916-x},
6328 issn = {1099-1506},
6330 pages = {645--662},
6350 title = {Comparison of Quasi Minimal Residual and Bi-Conjugate Gradient Iterative Methods
6351 to Solve Complex Symmetric Systems Arising from Time-Harmonic Simulations},
6356 pages = {298--310},
6361 @InProceedings{ widlund-wave-98,
6368 pages = {620--622},
6371 Aspects of Wave Propagation, Golden, Colorado, June 1--5},
6375 @InProceedings{ toselli-wave-98,
6383 pages = {540--542},
6385 Aspects of Wave Propagation, Golden, Colorado, June 1--5},
6389 @InProceedings{ mcinnes-wave-98,
6390 author = {L. C. McInnes and R. Susan-Resiga and H. M. Atassi and D. E. Keyes},
6397 pages = {623--625},
6399 Aspects of Wave Propagation, Golden, Colorado, June 1--5},
6404 author = {L. C. McInnes and R. Susan-Resiga and D. E. Keyes and H. M. Atassi},
6410 pages = {349--357},
6416 author = {X.-C. Cai and M. A. Casarin, Jr. and F. W. Elliott, Jr. and O. B. Widlund},
6421 pages = {437-445},
6427 author = {R. Susan-Resiga and H. M. Atassi},
6432 pages = {86-96},
6433 note = {AIAA paper 98-2218},
6439 author = {H. M. Atassi and R. Susan-Resiga},
6444 note = {NCA-25},
6445 pages = {375-379},
6451 author = {R. Susan-Resiga and H. M. Atassi},
6456 note = {NCA-25},
6457 pages = {381 -388},
6462 @InProceedings{ cai-dd10-98,
6463 author = {Xiao-Chuan Cai and Mario A. Casarin and Frank W. Elliott, Jr. and Olof B.
6467 editors = {Jan Mandel and Charbel Farhat and Xiao-Chuan Cai},
6473 pages = {437--445},
6495 pages = {C210--C231},
6510 pages = {586--597},
6516 title = {A parallel two-level domain decomposition based one-shot method for shape
6529 title = {Parallel Fully Coupled {Lagrange-Newton-Krylov-Schwarz} Algorithms and Software
6538 for {PDE}-constrained optimization},
6543 pages = {964--985},
6550 title = {Parallel full space {SQP Lagrange-Newton-Krylov-Schwarz} algorithms for
6551 {PDE}-constrained Optimization Problems},
6554 pages = {1305--1328},
6560 title = {Domain decomposition methods for {PDE}-constrained optimization problems},
6565 pages = {569--582},
6570 @Article{ belhamadia-fortin-pcp,
6572 title = {Three-dimensional anisotropic mesh adaptation for phase change problems},
6575 pages = {753-770},
6583 title = {A {Lagrange-Newton-Krylov-Schur} Method for {PDE} Constrained Optimization},
6584 journal = {SIAG-Opt Views and News},
6589 url = {http://www.cs.cmu.edu/\~{ }oghattas/papers/siag-opt/siag-opt.pdf},
6600 pages = {361--376},
6608 booktitle = {Proceedings of Parallel CFD '99, Williamsburg, Virginia, USA, May 23-26, 1999},
6615 title = {Using Automatic Differentiation for Second-order Matrix-free Methods in
6616 PDE-constrained Optimization},
6630 title = {Parallel Lagrange-Newton-Krylov-Schur Methods for PDE-Constrained Optimization.
6631 Part I: The Krylov-Schur Solver},
6641 title = {Parallel {Lagrange-Newton-Krylov-Schur} Methods for {PDE}-Constrained
6642 Optimization. Part II: The {Lagrange-Newton} Solver, and its Application to
6655 title = {A New Parallel Kernel-independent Fast Multipole Method},
6664 title = {{PetRBF} -- A parallel {O(N)} algorithm for radial basis function interpolation},
6667 number = {25-28},
6668 pages = {1793--1804},
6677 title = {{PetFMM} -- A dynamically load-balancing parallel fast multipole library},
6681 pages = {403--428},
6692 title = {A sub-grid scale finite element agglomeration multigrid method with application
6694 author = {AG Buchan and CC Pain and AP Umpleby and RP Smedley-Stevenson},
6698 pages = {318--342},
6706 author = {Fr{\'e}d{\'e}ric Magoul{\`e}s and Abal-Kassim Cheik Ahamed and Atsushi Suzuki},
6715 title = {IDEA -- An API for Parallel Computing with Large Spatial Datasets},
6718 pages = {355--364},
6720 isbn = {978-0-7695-4510-3},
6733 title = {Cu(ii)-porphyrin molecular dynamics as seen in a novel EPR/Stochastic Liouville
6739 pages = {10930-10941},
6753 pages = {9578-9589},
6771 title = {A time-discrete model for dynamic fracture based on crack regularization},
6775 pages = {133--143},
6776 doi = {10.1007/s10704-010-9562-x},
6782 author = {Blaise Bourdin and Gilles Francfort and Jean-Jacques Marigo},
6787 pages = {1--148},
6788 doi = {10.1007/s10659-007-9107-3},
6794 title = {Spectrum of the non-abelian phase in Kitaev's honeycomb lattice model},
6800 pages = {2286--2310},
6819 title = {Discriminative n-gram language modeling},
6824 pages = {373--392},
6833 author = {Garcia-Rivera, A. and Valin, R. and Seoane, N. and Garcia-Loureiro, A. and
6836 pages = {1--4},
6843 author = {Wesley-Smith, I.},
6850 author = {F.-N. Hwang and S.-R. Cai and Y.-L. Shao and J.-S. Wu},
6851 title = {Parallel {N}ewton--{K}rylov--{S}chwarz algorithms for the three-dimensional
6852 {P}oisson--{B}oltzmann equation in numerical simulation of colloidal particle
6857 pages = {1529--1537},
6862 author = {C.-Y. Huang and F.-N. Hwang},
6863 title = {Parallel pseudo-transient Newton-Krylov-Schwarz continuation algorithms for
6868 pages = {738--751},
6873 author = {F.-N. Hwang and Z.-H. Wei and T.-M. Huang and W. Wang},
6874 title = {A parallel additive Schwarz preconditioned Jacobi-Davidson algorithm for
6879 pages = {2932--2947},
6884 title = {{A Parallel Scalable PETSc-Based Jacobi-Davidson Polynomial Eigensolver with
6888 pages = {157--164},
6895 title = {{Sequential and parallel resolution of the two-group transient neutron diffusion
6896 equation using second-degree iterative methods}},
6897 author = {Flores-S{\'a}nchez, O. and Vidal, V. and Garc{\'\i}a, V. and Flores-S{\'a}nchez, P.},
6898 journal = {High Performance Computing for Computational Science-VECPAR 2006},
6899 pages = {426--438},
6923 pages = {124101--124111},
6932 title = {{Energetics of Calcium Selectivity: A Three-Dimensional Classical Density
6944 author = {SUWITO AND XIAO-CHUAN CAI AND YUNPING XI},
6951 url = {http://www.math.ualberta.ca/ijnam/Volume-3-2006/No-4-06/2006-04-06.pdf},
6966 @Article{ springerlink:10.1007/s10915-011-9551-x,
6967 author = {Schauer, Marco and Roman, Jose and Quintana-Ortí, Enrique and Langer, Sabine},
6968 affiliation = {Institut für Angewandte Mechanik, Technische Universität Carolo-Wilhelmina zu
6970 title = {Parallel Computation of 3-D Soil-Structure Interaction in Time Domain with a
6974 issn = {0885-7474},
6976 pages = {1-22},
6977 doi = {10.1007/s10915-011-9551-x},
6983 title = {Parallel Finite Element Computations for Soil-Foundation-Structure Interaction
6985 institution = {UCD CompGeoMech 02--2007},
6987 url = {http://sokocalo.engr.ucdavis.edu/~jeremic/wwwpublications/CV-R23.pdf},
6992 title = {Fast 3D frequency-dependent Radiative Transfer for Magneto-Hydrodynamics},
6994 institution = {Max-Planck-Institute for Astronomy},
7007 pages = {149--163},
7014 title = {COBRA-TF parallelization and application to PWR reactor core subchannel DNB
7019 pages = {1--18},
7025 title = {Solving Nonlinear Solid Mechanics Problems with the {J}acobian-{F}ree {N}ewton
7032 pages = {123--153},
7068 @InProceedings{ dc-oop-03,
7070 title = {Object-oriented programming for fast-and-easy development of parallel
7078 @InProceedings{ dc-cfm-03,
7086 @InProceedings{ dsc-pcsev-04,
7094 @InProceedings{ dsc-pca3fs-04,
7102 @InProceedings{ dbcs-cpaac-05,
7117 pages = {386--391},
7124 title = {{SIPs}: Shift-and-Invert Parallel Spectral Transformations},
7146 title = {Phase Field Simulations of Liquid-Liquid Demixing During Immersion Precipitation
7151 pages = {150--164},
7161 title = {Flame Acceleration Distance in Obstacle-Laden Tubes},
7163 url = {http://web.ing.unisannio.it/icnc2002/CP21Turbulent_Combustion-Deflagrations_Jets_&_Fires.pdf},
7172 url = {http://www.math.tu-berlin.de/\~{ }bobenko/Papers/Willmore.pdf},
7185 pages = {339--355},
7186 url = {http://www3.interscience.wiley.com/cgi-bin/abstract/102521480/ABSTRACT},
7204 title = {A fast, higher-order solver for scattering by penetrable bodies in three
7207 pages = {236--261},
7215 MULTI-DIMENSIONAL AMERICAN OPTIONS},
7227 url = {http://www.gg.caltech.edu/\~{ }zhukov/papers/ParallelPageRank-paper.pdf},
7231 @PhDThesis{ yergeau-99,
7233 title = {A DIAL-AN-OPERATOR APPROACH TO SIMULATION OF IMPURITY DIFFUSION IN
7237 url = {http://www-tcad.stanford.edu/tcad/pubs/theses/yergeau.pdf},
7241 @InProceedings{ rathkopf-miller-00,
7254 @Article{ bonfi-palma-pas-05,
7260 pages = {395-401},
7264 @InProceedings{ fettig-sobh-05,
7265 author = {John Fettig and Nahil Sobh and Dmitriy V. Melnikov and Jean-Pierre Leburton},
7266 title = {High Performance Algorithms for Scalable Spin-Qubit Circuits with Quantum Dots},
7269 url = {http://www.linuxclustersinstitute.org/Linux-HPC-Revolution/Archive/PDF05/28-Fettig_J.pdf},
7273 @TechReport{ melnikov-matagne-05,
7274 author = {Dmitriy V. Melnikov and Philippe Matagne and Jean-Pierre Leburton and D.G.
7277 magnetic field: Three-dimensional self-consistent simulation},
7279 number = {Arxiv preprint cond-mat/0506585},
7280 url = {http://arxiv.org/pdf/cond-mat/0506585},
7284 @InProceedings{ richard-smedley-03,
7285 author = {Richard P. Smedley-Stevenson},
7293 @Article{ guan-godoy-ravaioli-03,
7297 title = {Comparison Between Non-Equilibrium Green's Function and Monte Carlo Simulations
7300 pages = {335--339},
7305 author = {S. Ovtchinnikov and X.-C. Cai},
7308 title = {One-level {N}ewton--{K}rylov--{S}chwarz algorithm for unsteady nonlinear radiation
7311 pages = {867--881},
7316 title = {Floating Solids: Combining Phase Field and Fluid-Structure Interactions},
7322 pages = {157--166},
7328 title = {Accuracy analysis of the thrust force in 2D-3D finite element models},
7345 @Article{ adams-07b,
7353 pages = {497-507},
7359 title = {Computational Modeling of Ion Beam-Neutralizer Interactions in Two and Three
7367 @InProceedings{ allard-gouranton-ipts2002,
7369 title = {Parallelizing Pre-rendering Computations on a Net Juggler PC Cluster},
7372 url = {http://www-id.imag.fr/\~{ }allardj/files/ipts2002.pdf},
7388 Implemented in an Object-Oriented Programming Framework},
7391 pages = {1286-1292},
7398 title = {Least-Squares Finite Element Methods for Electromagnetic Applications},
7401 number = {2000-05},
7402 url = {http://www.phi.chalmers.se/pub/preprints/ps/phiprint-2000-05.ps},
7408 title = {A Moving Overset Grid Method for Interface Dynamics Applied to Non-Newtonian Hele
7414 pages = {117-142},
7424 }osborne/msc-projects/wallach.ps.gz},
7430 title = {Stability of explicit-implicit hybrid time-stepping schemes for Maxwells
7435 pages = {426-438},
7441 title = {Comparison of two implementations of {AMG}-preconditioned {CG} considering an
7445 url = {http://www10.informatik.uni-erlangen.de/de/Publications/TechnicalReports/TechRep04-1.pdf},
7446 number = {04-1},
7451 author = {Natalia Seoane and A.J.Garca-Loureiro},
7456 publisher = {Springer-Verlag},
7464 title = {Simulation of Sandia Flame D Using Velocity-Scalar Filtered Density Function},
7468 pages = {1513--1522},
7477 doi = {10.1007/s10494-010-9272-5},
7489 pages = {4918--4925},
7498 title = {Scalable Newton-Krylov Solver for Very Large Power Flow Problems},
7503 pages = {390-396},
7505 issn = {0885-8950},
7526 @InProceedings{ abhyankarhipcna11-1,
7528 title = {Using {PETSc} to develop scalable applications for next-generation power grid},
7532 url = {http://www.mcs.anl.gov/uploads/cels/papers/P1957-0911.pdf},
7537 @InProceedings{ abhyankarhipcna11-2,
7539 title = {Development of a parallel three-phase transient stability simulator for power
7550 title = {An implicitly-coupled solution approach for combined electromechanical and
7560 title = {Scalable Newton-Krylov solver for very large Power Flow problems},
7564 pages = {390-396},
7570 title = {A distributed implementation of multi-area power system state estimation on a
7575 pages = {20 - 32},
7577 issn = {0378-7796},
7600 title = {Algorithms and Computing Architectures for Solving Differential-Algebraic
7637 author = {Bruce Carter and Chuin-Shan Chen and L. Paul Chew and Nikos Chrisochoides and
7651 booktitle = {Simulation of materials processing: Theory, methods, and applications -
7669 title = {RF3P-A New Parallel Driven Frequency Electromagnetic Solver},
7679 title = {Modelling and Finite Element Simulation of Non-Linear and Anisotropic
7680 Quasi-Static Electromagnetic Systems},
7688 title = {Reducing the Computation Time of Non-Linear Problems by an Adaptive Linear System
7693 pages = {1306--1309},
7697 @Article{ holst-lindblom-etal:2004,
7713 pages = {1572--9516},
7718 @Article{ cook-pfeiffer:2004,
7723 pages = {104016--24},
7728 @Article{ pfeiffer-kidder-etal:2005,
7739 @Article{ pfeiffer-kidder-etal:2003,
7746 pages = {253--273},
7747 note = {Solves nonlinear coupled 3-D elliptic equations that arise in general relativity.
7748 For a related online version, see arXiv:gr-qc/0202096},
7752 @Article{ pfeiffer-cook-teukolsky:2002,
7754 title = {Comparing initial-data sets for binary black hole},
7759 note = {for a related online version, seearXiv:gr-qc/0203085},
7775 number = {Arxiv preprint gr-qc/0206003},
7776 url = {http://arxiv.org/pdf/gr-qc/0206003},
7782 title = {Finding apparent horizons and other 2-surfaces of constant expansion},
7785 pages = {4719-4737},
7787 url = {http://www.iop.org/EJ/article/0264-9381/20/22/001/cqg3_22_001.pdf},
7791 @Article{ adams-03a,
7794 number = {2-3},
7795 pages = {141-153},
7808 pages = {1709--1712},
7818 booktitle = {In Proceedings of Ninth Internation Conference on Numerical Combustion - ICNC
7820 pages = {49-55},
7821 url = {http://web.ing.unisannio.it/icnc2002/CP21Turbulent_Combustion-Deflagrations_Jets_&_Fires.pdf},
7827 title = {An Inherently-Parallel Method for Solving Discretized Diffusion Equations},
7831 note = {Funded under the ASCI Level III: Computational Transport Issues for Large-Scale
7842 pages = {727--736},
7853 (CoNLL-2002)},
7854 pages = {49-55},
7871 pages = {1499-1515},
7877 author = {C.J.Palansuriya and C-H.Lai and C.S.Ierotheou and K.A.Pericleous and D.E.Keyes},
7881 editor = {C.-H. Lai et al.},
7888 @Unpublished{ mmmdcmaa-web-page,
7889 title = {{M}ulti-{M}odel {M}ulti-{D}omain {C}omputational {M}ethods in {A}erodynamics and
7902 pages = {528--535},
7908 @Unpublished{ oil-reservoir-sim-web-page,
7921 pages = {143--146},
7931 pages = {47--51},
7942 pages = {1336--42},
7973 institution = {University of Wisconsin-Milwaukee},
7992 booktitle = {Proceedings of Aix-les-Bains TEAM Workshop},
8013 Gent, Belgium, September 27--30, 1999.},
8020 optpages = {179--184},
8030 pages = {1336--42},
8035 @Article{ gilli-pauletto-1998,
8041 pages = {173--186},
8049 title = {{PetIGA}: High-Performance Isogeometric Analysis},
8059 title = {PetIGA: A framework for high-performance isogeometric analysis},
8067 @Misc{ petiga-web-page,
8082 pages = {93-138},
8084 doi = {10.1007/s11831-007-9003-9},
8086 issn = {1134-3060},
8098 pages = {1517-1532},
8100 issn = {0920-8542},
8101 doi = {10.1007/s11227-011-0563-y},
8109 @Unpublished{ feap-web-page,
8113 note = {Uses PETSc linear solvers - iterative and direct},
8117 @Unpublished{ parpre-web-page,
8133 note = {\url{http://www.pism-docs.org/}},
8138 title = {OOFEM - an object oriented finite element package},
8145 title = {OpenFVM - a finite volume based general purpose CFD solver},
8151 @Unpublished{ sundar-2008w,
8160 @Unpublished{ khatiwala07-software,
8169 author = {Xiangmin Jiao and Xiang-Yang Li and Xiaosong Ma},
8173 publisher = {Springer-Verlag},
8188 @Unpublished{ petsc-python,
8191 url = {https://petsc.org/main/petsc4py},
8196 title = {{CFDShip-Iowa}},
8200 note = {CFDShip-Iowa is a multiblock free surface flow solver that uses overset
8208 institution = {Mechanical Engineering - Chalmers University of Technology},
8216 title = {FENA - A Finite Element Model for the North Atlantic},
8218 institution = {Alfred-Wegener-Institute for Polar and Marine Research},
8219 url = {http://www.awi-bremerhaven.de/Modelling/INVERSE/FENAdesc/FENAdesc.html},
8225 and Simulation in {3-D}},
8228 institution = {Christian-Albrechts-Universit\"at zu Kiel},
8229 url = {http://www.informatik.uni-kiel.de/uploads/tx_publication/tr_1016_01.pdf},
8233 @Unpublished{ metos3d-web,
8234 title = {{Metos3D}: {A} Marine Ecosystem Toolkit for Optimization and Simulation in 3-D},
8236 institution = {Christian-Albrechts-Universit\"at zu Kiel},
8237 url = {http://www.informatik.uni-kiel.de/en/algorithmic-optimal-control/software/metos3d/},
8258 @Misc{ moose-web-page,
8259 title = {Multiphysics {O}bject-{O}riented {S}imulation {E}nvironment ({MOOSE})},
8270 author = {Gaston, D. and Newman, C. and Hansen, G. and Lebrun-Grandi{\'e}, D.},
8274 pages = {1768--1778},
8281 title = {An object-oriented finite element framework for multiphysics phase field
8287 pages = {20--29},
8298 url = {http://geodynamics.org/cig/software/github/pylith/v2.0.0/pylith-2.0.0_manual.pdf},
8302 @Misc{ pylith-web-page,
8328 title = {Computational approaches to studying non-linear dynamics of the crust and
8334 number = {1-4},
8335 pages = {69--82},
8342 title = {Chaste: a test-driven approach to software development for biological modelling},
8343 author = {Pitt-Francis, J. and Pathmanathan, P. and Bernabeu, M.O. and Bordas, R. and
8349 pages = {2452--2471},
8376 title = {Innovative Modern Object-Oriented Solving Environment - {iMOOSE}},
8385 MPI-parallel solvers from CSR-matrix format frequently used in sequential/vector
8387 institution = {AWI-Bremerhaven, Germanny},
8394 title = {PETSC-FUN3D Benchmark Page},
8396 url = {http://www.mcs.anl.gov/petsc-fun3d},
8412 title = {Prometheus - A scalable unstructured finite element solver},
8427 title = {RheoPlast Phase Field Multi-Physics Code},
8433 @Misc{ tao-web-page,
8442 @TechReport{ tao-user-ref,
8448 number = {ANL/MCS-TM-322 - Rev 3.12},
8453 @Unpublished{ mefpp-web-page,
8463 @Unpublished{ tipetsc-titanium,
8464 title = {Ti-PETSc - an interface to PETSc from Titanium},
8472 @Unpublished{ ptatin-web-page,
8480 @Misc{ multiphase-web-page,
8484 howpublished = {\url{http://cnls-www.lanl.gov/~qzou}},
8485 url = {http://cnls-www.lanl.gov/\~{ }qzou},
8490 @Misc{ electromag-web-page,
8500 @Unpublished{ fe-software-web-page,
8503 url = {http://www.esat.kuleuven.ac.be/elen/research/software-development},
8507 @Misc{ petsc-web-page,
8523 @Unpublished{ petsc-debian-package,
8537 @Unpublished{ petsc-fem,
8539 title = {PETSc-FEM: A General Purpose, Parallel, Multi-Physics FEM Program},
8564 @TechReport{ slepc-users-manual,
8568 number = {DISC-II/24/02},
8585 title = {{deal.II---A general-purpose object-oriented finite element library}},
8590 pages = {24--es},
8591 issn = {0098-3500},
8621 pages = {6--15},
8622 issn = {1558-366X},
8634 title = {Run-time extensibility and librarization of simulation software},
8639 pages = {38--45},
8651 number = {ANL/MCS-P2011-0112},
8660 number = {UCRL-ID-135342},
8668 title = {{PETSc's} software strategy for the design space of composable extreme-scale
8672 note = {{DOE} Exascale Research Conference, April 16-18, 2012, Portland, OR},
8674 number = {ANL/MCS-P2059-0312},
8681 title = {Coping at the User-Level with Resource Limitations in the {Cray} Message Passing
8701 booktitle = {GPU Solutions to Multi-scale Problems in Science and Engineering},
8705 doi = {10.1007/978-3-642-16405-7_7},
8707 pages = {131--140},
8709 isbn = {978-3-642-16404-0},
8716 booktitle = {GPU Solutions to Multi-scale Problems in Science and Engineering},
8720 doi = {10.1007/978-3-642-16405-7_1},
8722 pages = {131--140},
8724 isbn = {978-3-642-16404-0},
8731 booktitle = {GPU Solutions to Multi-scale Problems in Science and Engineering},
8735 doi = {10.1007/978-3-642-16405-7_30},
8737 pages = {487--501},
8739 isbn = {978-3-642-16404-0},
8748 booktitle = {GPU Solutions to Multi-scale Problems in Science and Engineering},
8752 doi = {10.1007/978-3-642-16405-7_21},
8754 pages = {321--333},
8756 isbn = {978-3-642-16404-0},
8768 pages = {50--60},
8790 pages = {213--224},
8800 pages = {1--8},
8810 pages = {99--106},
8825 publisher = {Springer-Verlag GmbH},
8829 @InProceedings{ dalcin-paz-storti,
8838 @Article{ mpi-python,
8860 pages = {2224-2239},
8866 @MastersThesis{ aarrestad-master,
8873 note = {Implemented Runge-Kutta methods using PETSc},
8877 @PhDThesis{ kaushik-phd,
8891 number = {2002-13},
8894 url = {http://www.phi.chalmers.se/pub/preprints/pdf/phiprint-2002-13.pdf},
8916 pages = {1811--1831},
8921 @Article{ automatic-ad,
8928 pages = {1426--1438},
8932 @TechReport{ remote-math,
8936 number = {ANL/MCS-P889-0601},
8948 booktitle = {Proceedings of the SIAM Workshop on Object Oriented Methods for Inter-operable
8951 pages = {21-29},
8959 booktitle = {Proceedings of the SIAM Workshop on Object Oriented Methods for Inter-operable
8980 title = {Developing a Derivative-Enhanced Object-Oriented Toolkit for Scientific
8983 booktitle = {Proceedings of the SIAM Workshop on Object Oriented Methods for Inter-operable
8986 note = {also available as Argonne preprint ANL/MCS-P731-1098},
8988 pages = {129-137},
8999 pages = {163--202},
9005 @TechReport{ petsc-user-ref,
9017 number = {ANL-21/39 - Revision 3.24},
9023 @TechReport{ petsc-developers,
9027 number = {ANL-18/18},
9033 @Unpublished{ alice-memory-snooper,
9040 @TechReport{ petsc-user-ref-polish,
9050 title = {Integrating Automatic Differentiation with Object-Oriented Toolkits for
9051 High-Performance Scientific Computing},
9063 @Unpublished{ petsc-mpi-paper,
9073 @InProceedings{ miss-paper,
9080 pages = {87--93},
9085 @InProceedings{ snes-paper,
9093 pages = {60-67},
9100 title = {The Design of Data-structure-neutral Libraries for the Iterative Solution of
9104 pages = {329--336},
9112 title = {A Microkernel Design for Component-based Parallel Numerical Software Systems},
9113 booktitle = {Proceedings of the SIAM Workshop on Object Oriented Methods for Inter-operable
9116 pages = {58-67},
9128 pages = {415-424},
9136 title = {Infrastructure and Interfaces for Large-Scale Numerical Software},
9138 Distributed Processing Techniques and Applications, June 28 - July 1, 1999, Las
9142 number = {ANL/MCS-P751-0599},
9151 booktitle = {Euro-Par 2000 -- Parallel Processing, Proceedings of the 6th International
9152 Euro-Par Conference, Munich, Germany, August/September 2000},
9157 pages = {86--94},
9172 pages = {57--68},
9179 number = {ANL/MCS-P701},
9187 title = {The Transition of Numerical Software: From Nuts-and-Bolts to Abstraction},
9194 @TechReport{ ad-petsc-tm,
9197 author = {Christian Bischof and Paul Hovland and Po-Ting Wu},
9202 number = {ANL/MCS-TM-233},
9221 journal = {arXiv e-prints},
9254 title = {Comparative study of finite element methods using the Time-Accuracy-Size {(TAS)}
9260 pages = {C779--C802},
9268 title = {Composable solvers for the four-field double porosity/permeability model},
9273 pages = {428--466},
9287 pages = {1--5},
9301 pages = {C426--C440},
9308 title = {Extreme-Scale Multigrid Components within {PETSc}},
9313 isbn = {978-1-4503-4126-4},
9315 pages = {5:1--5:12},
9322 keywords = {GPU, HPC, agglomeration, coarse-level solver, multigrid, parallel computing,
9329 title = {Field-Split Preconditioned Inexact Newton Algorithms},
9334 pages = {A1388--A1409},
9341 title = {A hybrid geometric+ algebraic multigrid method with semi-iterative smoothers},
9346 pages = {221--238},
9353 title = {Enhanced balancing Neumann-Neumann preconditioning in computational fluid and
9359 pages = {203--230},
9369 pages = {4532--4542},
9391 title = {Efficient Sparse Matrix-Matrix Products Using Colorings},
9400 title = {Agglomeration-based physical frame d{G} discretizations: {A}n attempt to be mesh
9406 pages = {1495--1539},
9414 title = {{Multiscale modeling using goal-oriented adaptivity and numerical homogenization.
9415 Part II: Algorithms for the Moore-Penrose pseudoinverse}},
9418 pages = {418-426},
9427 author = {Yang, Haijian and Cai, Xiao-Chuan},
9428 title = {Parallel Two-Grid Semismooth {N}ewton--{K}rylov--{S}chwarz Method for Nonlinear
9435 pages = {258--280},
9437 issn = {0885-7474},
9439 doi = {10.1007/s10915-010-9436-4},
9444 preconditioners, Semismooth Newton, Two-level methods},
9454 pages = {425-463},
9456 issn = {1134-3060},
9457 doi = {10.1007/s11831-009-9035-4},
9483 journal = {ArXiv e-prints},
9486 date = {2016-07-14},
9494 title = {Nonlinear {FETI-DP} and {BDDC} Methods},
9499 pages = {A737--A765},
9510 pages = {535--565},
9511 note = {\url{http://www.mcs.anl.gov/papers/P2010-0112.pdf}},
9512 url = {http://www.mcs.anl.gov/papers/P2010-0112.pdf},
9519 title = {Hierarchical {Krylov} and nested {Krylov} methods for extreme-scale computing},
9522 pages = {17--31},
9530 title = {Hierarchical {Krylov} and Nested {Krylov} Methods for Extreme-Scale Computing},
9533 number = {ANL/MCS-P2097-0512},
9547 pages = {55--62},
9557 pages = {4100--4114},
9563 author = {J.-H. Kimn and Blaise Bourdin},
9570 publisher = {Springer-Verlag},
9571 pages = {309--315},
9585 @Unpublished{ sundar-2008a,
9592 @Article{ sundar-2008,
9594 title = {Bottom-up construction and 2:1 balance refinement of linear octrees in parallel},
9601 @InProceedings{ sundar-2007,
9603 title = {Low-constant parallel algorithms for finite element simulations using linear
9611 @InProceedings{ adams-98a,
9620 title = {{Dynamic data-driven inversion for terascale simulations: real-time
9630 @InBook{ akcelik-2006,
9635 chapter = {Parallel algorithms for {PDE}-constrained optimization},
9647 pages = {235--253},
9654 author = {Feng-Nan Hwang},
9672 title = {A Parallel Implementation of Dual-Primal {FETI-DP} Methods for Three Dimensional
9674 institution = {Universit\"at Duisburg-Essen},
9677 number = {SM-E-601},
9683 title = {Inexact FETI-DP Methods},
9684 institution = {Universit\"at Duisburg-Essen},
9687 number = {SM-E-609},
9693 title = {Robust FETI-DP Methods for Heterogeneous Three Dimensional Elasticity Problems},
9694 institution = {Universit\"at Duisburg-Essen},
9697 number = {SM-E-607},
9701 @Article{ kul-natraj-pbp,
9709 pages = {753--777},
9715 title = {Using Exact {J}acobians in an Implicit {N}ewton-{K}rylov Method},
9719 pages = {1063--1073},
9721 abstract = {In an implicit Newton-Krylov method for inviscid, compressible fluid flow, the
9725 man-hour investment needed. In this work, automatic differentiation is used to
9728 approximated by first-order forward differences. For a two-dimensional airfoil
9729 under three different flight conditions (quasi-incompressible flow, compressible
9743 pages = {401--407},
9749 author = {Hans-Peter Kersken and Uwe Kuster},
9752 url = {http://elib.uni-stuttgart.de/opus/volltexte/1999/310/pdf/310.pdf},
9757 @Article{ miha-mija,
9763 pages = {567--583},
9764 url = {http://www3.interscience.wiley.com/cgi-bin/abstract/98516459/ABSTRACT},
9773 pages = {88--114},
9775 url = {http://scholar.google.com/url?sa=U&q=http://emis.bibl.cwi.nl/journals/ETNA/vol.8.1999/pp88-114.dir/pp88-114.ps},
9781 title = {Fast, High-Order Methods for Scattering by Inhomogeneous Media},
9793 pages = {485--486},
9795 url = {http://www3.interscience.wiley.com/cgi-bin/abstract/104087421/ABSTRACT},
9805 pages = {31--45},
9808 url = {http://www.mia.uni-saarland.de/weickert/Papers/TR_5_99.ps.gz},
9819 number = {CU-CS-957-03},
9824 author = {Leszek Marcinkowski and Xiao-Chuan Cai},
9825 title = {Parallel Performance of Some Two-Level {ASPIN} Algorithms},
9828 pages = {639--646},
9831 url = {http://www.ddm.org/DD15/proceedings-dd15.html},
9838 title = {A Domain Decomposition Based Two-Level Newton Scheme for Nonlinear Problems},
9841 pages = {615--622},
9844 url = {http://www.ddm.org/DD15/proceedings-dd15.html},
9851 title = {Some Computational Results for Dual-Primal FETI Methods for Elliptic Problems in
9855 pages = {361--368},
9858 url = {http://www.ddm.org/DD15/proceedings-dd15.html},
9864 author = {Feng-Nan Hwang and Xiao-Chuan Cai},
9869 pages = {201--208},
9872 url = {http://www.ddm.org/DD15/proceedings-dd15.html},
9879 title = {Balancing {Neumann-Neumann} for (In)Compressible Linear Elasticity and
9883 pages = {209--216},
9898 pages = {395--401},
9913 pages = {359--367},
9923 author = {Xiao-Chuan Cai and David E. Keyes and David P. Young},
9928 pages = {343--350},
9937 @Conference{ li-etal:03,
9939 title = {Multiplicative-additive preconditioning combination for general sparse linear
9944 date = {october 27-29},
9950 title = {Hessian-based model reduction for large-scale systems with initial-condition
9957 pages = {844--868},
9964 title = {Hessian-Based Model Reduction for Large-Scale Data Assimilation Problems},
9967 journal = {Computational Science--ICCS 2007},
9968 pages = {1010--1017},
9975 title = {Fast algorithms for {B}ayesian uncertainty quantification in large-scale linear
9976 inverse problems based on low-rank partial {H}essian approximations},
10034 title = {An Algebraic Multilevel Preconditioner for Field-Circuit Coupled Problems},
10037 pages = {267--275},
10043 title = {Faster {PDE}-based Simulations Using Robust Composite Linear Solvers},
10048 number = {ANL/MCS-P993-0902},
10055 title = {Adaptive Sparse Linear Solvers for Implicit {CFD} Using {Newton-Krylov}
10065 title = {The Role of Multi-Method Linear Solvers in {PDE}-based Simulations},
10069 pages = {828--839},
10076 title = {Newton-Krylov-FAC Methods for Problems Discretized on Locally Refined Grids},
10083 @Article{ adams-02,
10087 pages = {593-610},
10088 title = {Parallel multigrid smoothing: polynomial versus {G}auss--{S}eidel},
10095 title = {A distributed memory unstructured {G}auss-{S}eidel algorithm for multigrid
10099 pages = {14--14},
10112 isbn = {3-89722-923-4},
10119 title = {Pseudo-Transient Continuation and Differential-Algebraic Equations},
10132 title = {Balancing Neumann-Neumann Preconditioners for Mixed Approximations of
10136 pages = {283--324},
10138 url = {http://www.cs.nyu.edu/csweb/Research/TechReports/TR2002-825/TR2002-825.pdf},
10148 pages = {347--357},
10157 url = {http://cdcsp.univ-lyon1.fr/\~{ }dd13/DD13proc/Dostal.pdf},
10169 title = {An Algebraic Multilevel Preconditioner for Field-Circuit Coupled Problems},
10174 pages = {413-416},
10179 author = {X.-C. Cai and D. E. Keyes and L. Marcinkowski},
10186 pages = {1463--1470},
10191 author = {X.-C. Cai and D. E. Keyes and D. P. Young},
10204 author = {X.-C. Cai and D. E. Keyes},
10209 pages = {183--200},
10215 author = {Feng-Nan Hwang and X.-C. Cai},
10216 url = {http://amath.colorado.edu/student/hwangf/papers/one-level-aspin.pdf},
10218 for incompressible {Navier-Stokes} equations},
10222 pages = {666--691},
10227 author = {Feng-Nan Hwang and X.-C. Cai},
10229 title = {A Class of Parallel Two-Level Nonlinear {Schwarz} Preconditioned Inexact {Newton}
10234 pages = {1603--1611},
10238 @InProceedings{ adams-01,
10240 title = {A Distributed Memory Unstructured {G}auss-{S}eidel Algorithm for Multigrid
10251 title = {Algebraic Multigrid for Two Dimensional Time-Harmonic Magnetic Field
10259 @Article{ adams-00,
10263 pages = {1241-1262},
10275 pages = {519-534},
10290 pages = {1535--1538},
10294 @InProceedings{ adams-99c,
10307 title = {Overlapping {S}chwarz Methods on Unstructured Meshes using Non-matching Coarse
10312 pages = {149--167},
10316 @TechReport{ adams-csd-98-993,
10320 number = {CSD-98-993},
10331 of our algorithm under the P-RAM computational model is of $O(1)$, which is an
10332 improvement over the previous best P-RAM complexity for this class of graphs. We
10333 present numerical experiments on an IBM SP, that confirm our P-RAM complexity
10345 pages = {1-–137},
10352 author = {Kent-Andre Mardal and Ragnar Winther},
10356 pages = {1--40},
10363 number = {TR1994-676},
10368 url = {http://www.cs.nyu.edu/csweb/Research/TechReports/TR1994-676/TR1994-676.pdf},
10376 publisher = {Westfalishen Wilhelms-Universitat Munster},
10377 url = {http://www.cs.nyu.edu/csweb/Research/TechReports/TR1996-716/TR1996-716.pdf},
10386 number = {ANL/MCS-P1295-1005},
10401 number = {ANL/MCS-P1455-0907},
10418 pages = {215--230},
10420 doi = {10.3233/SPR-2009-0249},
10429 Ant\^onio Carlos 6627, Caixa Postal 702, 30161-970 Belo Horizonte, MG, Brazil},
10430 title = {Computing the First Eigenpair of the $p$-{L}aplacian via Inverse Iteration of
10434 issn = {0885-7474},
10436 pages = {180--201},
10440 doi = {10.1007/s10915-011-9540-0},
10462 issn = {1560-6074},
10471 publisher = {Morgan-Kaufmann},
10486 @Misc{ petsc-fem:homepage,
10487 title = {{PETSc-FEM}: A General Purpose, Parallel, Multi-physics {FEM} Program},
10494 @Misc{ petsc4py-web-page,
10496 title = {{PETSc} for {Python} -- {Python} bindings for {PETSc} libraries},
10497 howpublished = {\url{http://code.google.com/p/petsc4py/}},
10498 note = {http://code.google.com/p/petsc4py/},
10508 number = {3--4},
10509 pages = {237--254},
10511 doi = {10.1007/s00366-006-0049-3},
10516 title = {{SISIPHUS}: Scalable Ice-Sheet Solvers and Infrastructure for Petascale,
10517 High-Resolution, Unstructured Simulations},
10534 howpublished = {\url{http://pism-docs.org}},
10539 title = {Dohp: Dual order $hp$-finite elements},
10553 doi = {10.1088/1749-4699/5/1/014012},
10559 @Misc{ petclaw-github,
10567 @Misc{ pyclaw-web-page,
10577 title = {High-order wave propagation algorithms for general hyperbolic systems},
10585 title = {{Parallel {Lagrange-Newton-Krylov-Schur} methods for {PDE} constrained
10586 optimization. Part I: The {Krylov-Schur} solver}},
10591 pages = {687--713},
10598 title = {Parallel {Lagrange-Newton-Krylov-Schur} methods for {PDE}-constrained
10605 pages = {714--739},
10621 full-{S}tokes and simpler models for {P}ine {I}sland {G}lacier, {W}est
10641 url = {http://stacks.iop.org/1749-4699/5/014002},
10651 pages = {803--825},
10654 url = {http://link.springer.com/article/10.1007/s10915-015-0159-4},
10655 doi = {10.1007/s10915-015-0159-4},
10657 note = {Also preprint ANL/MCS-P3039-0912},
10664 journal = {ArXiv e-prints},
10668 keywords = {Computer Science - Mathematical Software, Computer Science - Computational
10682 editor = {Anders Logg, Kent-Andre Mardal, Garth Wells},
10684 isbn = {978-3-642-23098-1},
10692 journal = {ArXiv e-prints},
10696 keywords = {Computer Science - Mathematical Software, Computer Science - Distributed,
10697 Parallel, and Cluster Computing, Physics - Computational Physics},
10707 title = {{ViennaCL - A High Level Linear Algebra Library for GPUs and Multi-Core CPUs}},
10710 pages = {51-56},
10718 url = {https://figshare.com/articles/Exascale_Computing_without_Threads-Barry_Smith_pdf/5824950},
10730 url = {http://www.orau.gov/hpcor2015/whitepapers/Overview_of_the_PETSc_Library-Lois_McInnes.pdf},
10755 journal = {ArXiv e-prints},
10789 number = {ANL/MCS-P3025-0812},
10797 note = {whitepaper submitted to DOE Workshop on Software Productivity for Extreme-Scale
10813 title = {Run-time Extensibility: Anything Less is Unsustainable},
10814 note = {whitepaper submitted to DOE Workshop on Software Productivity for Extreme-Scale
10826 url = {http://link.springer.com/article/10.1007/s00466-015-1129-2},
10837 pages = {5903-5920},
10849 pages = {1960-1977},
10861 pages = {1608--1624},
10871 url = {http://jointlab.ncsa.illinois.edu/events/workshop3/pdf/presentations/Gropp-Update-on-Libraries.pdf},
10887 title = {Low-communication techniques for extreme-scale multilevel solvers},
10888 booktitle = {Exascale Mathematics Workshop, Aug 21--22, Washington, DC},
10899 journal = {arXiv e-prints},
10907 title = {{PCBDDC}: a class of robust dual-primal methods in {PETSc}},
10912 pages = {S282--S306},
10924 pages = {277--295},
10935 pages = {A1389--A1415},
10941 constraints for {Raviart-Thomas} vector fields},
10942 author = {D.-S. Oh and Olof B. Widlund and Stefano Zampini and Clark Dohrmann},
10946 pages = {659--692},
10958 pages = {A281--A302},
10969 pages = {1337--1370},
10976 author = {Luc Berger-Vergiat and Haim Waisman},
10979 pages = {33--60},
10985 title = {{PETSc} {DMNetwork}: A Library for Scalable Network PDE-Based Multiphysics
10999 title = {Vectorized Parallel Sparse Matrix-Vector Multiplication in {PETSc} Using
11000 {AVX-512}},
11006 @Misc{ petsc-user-meetings:website,
11013 @Article{ flexible-bicgstab-chen16,
11021 pages = {803--825},
11022 doi = {10.1007/s10915-015-0159-4},
11026 @Misc{ petsc-extensibility2016,
11030 \url{https://sinews.siam.org/Details-Page/extensibility-in-petsc}},
11035 @Misc{ error-estimation-whitepaper2017,
11037 title = {End-to-end error estimation and control},
11044 @Misc{ petsc-user-support15,
11049 15-16, 2015},
11054 @InBook{ petsc-mixed-language-support2016,
11055 title = {Numerical Library Support for High-Performance Mixed Language Applications and
11061 pages = {201--214},
11078 @InProceedings{ werner-kimn2019,
11079 title = {Parallel implementation of {AC} optimal power flow and time-constrained optimal
11080 power flow using high-performance computing},
11082 Jung-Han Kimn},
11089 @MastersThesis{ rinaldo-ceresoli18,
11105 pages = {C441-C470},
11120 pages = {842-853},
11130 pages = {1--20},
11141 pages = {1124 - 1139},
11143 issn = {0309-1708},
11155 pages = {31-39},
11166 pages = {1108 - 1115},
11167 issn = {0743-7315},
11173 title = {PetIGA: A framework for high-performance isogeometric analysis},
11178 pages = {151 - 181},
11179 issn = {0045-7825},
11190 volume = {213-216},
11191 pages = {353 - 361},
11192 issn = {0045-7825},
11204 pages = {A767-A784},
11215 pages = {295--320},
11225 pages = {398--407},
11229 @Misc{ rol-website,
11242 pages = {286--307},
11254 pages = {19--45},
11268 title = {Implicit-explicit formulations of a three-dimensional nonhydrostatic unified
11274 pages = {B1162-B1194},
11282 journal = {ArXiv e-prints},
11286 keywords = {Mathematics - Numerical Analysis, 65L05, 65L06, 65L20, 65L70},
11294 title = {Implicit-Explicit {R}unge-{K}utta Schemes and Applications to Hyperbolic Systems
11300 pages = {129--155},
11305 title = {Additive {R}unge-{K}utta schemes for convection-diffusion-reaction equations},
11309 number = {1-2},
11310 pages = {139--181},
11312 doi = {10.1016/S0168-9274(02)00138-1},
11317 title = {Implicit-Explicit {R}unge-{K}utta schemes for hyperbolic systems and kinetic
11325 title = {Implicit-explicit {R}unge-{K}utta methods for time-dependent partial differential
11330 pages = {151--167},
11335 title = {Computer methods for ordinary differential equations and differential-algebraic
11344 title = {Segregated {Runge}--{Kutta} methods for the incompressible {Navier}--{Stokes}
11350 pages = {372--400},
11362 pages = {3459--3472},
11364 abstract = {In the numerical simulation of atmospheric transport-chemistry processes, a major
11369 from Sandu et al. (1996, CWI Report NM-R9603 and Report in Comput. Math., No. 85)
11370 and compare eight solvers on a set of seven box-models used in present day models.
11379 title = {New {R}osenbrock {W}-methods of order 3 for partial differential algebraic
11385 pages = {761--787},
11388 doi = {10.1007/s10543-005-0035-y}
11392 title = {Improved traditional {R}osenbrock--{W}anner methods for stiff {ODE}s and {DAE}s},
11396 pages = {128--144},
11408 pages = {251--289},
11409 doi = {10.1007/s10915-008-9239-z},
11419 pages = {322-333},
11420 doi = {10.1016/S0167-2789(01)00289-5},
11426 title = {Highly Efficient Strong Stability-Preserving {R}unge--{K}utta Methods with
11427 Low-Storage Implementations},
11432 pages = {2113--2136},
11435 keywords = {method of lines, strong stability-preserving, monotonicity, low-storage,
11441 title = {A generalized-alpha method for integrating the filtered {N}avier--{S}tokes
11447 pages = {305--319},
11457 number = {4-6},
11458 pages = {560--580},
11468 issn = {0885-064X}
11472 title = {Extrapolated implicit-explicit time stepping},
11477 pages = {4452-4477},
11479 comment = {Preprint \# ANL/MCS-P1612-0409},
11484 title = {Liszt: a domain specific language for building portable mesh-based PDE solvers},
11496 title = {Designing the Language Liszt for Building Portable Mesh-based PDE Solvers},
11511 author = {El-Ghazawi, Tarek and Smith, Lauren},
11519 title = {Co-Array Fortran for parallel programming},
11524 pages = {1--31},
11530 title = {Titanium: A high-performance Java dialect},
11538 title = {X10: an object-oriented approach to non-uniform cluster computing},
11545 pages = {519--538},
11556 pages = {291--312},
11566 pages = {91--108},
11578 pages = {235--245},
11584 title = {ABCL: an object-oriented concurrent system},
11591 title = {Object-oriented concurrent programming in CST},
11594 applications: Architecture, software, computer systems, and general issues-Volume
11596 pages = {434--439},
11602 title = {Easy-to-use object-oriented parallel processing with Mentat},
11607 pages = {39--51},
11616 pages = {13--23},
11621 title = {An object-oriented class library for scalable parallel heuristic search},
11622 author = {Lau, Wing-cheong and Singh, Vineet},
11623 booktitle = {ECOOP’92 European Conference on Object-Oriented Programming},
11624 pages = {252--267},
11640 title = {Parallex an advanced parallel execution model for scaling-impaired applications},
11643 pages = {394--401},
11653 number = {ANL/MCS-P5135-0414}
11662 issn = {1521-9615},
11664 pages = {27-35},
11671 title = {MPI: A Message-Passing Interface Standard, Version 3.0},
11684 title = {Annotation-based empirical performance tuning using {Orio}},
11688 pages = {1--11},
11707 pages = {375--381},
11723 pages = {225--244},
11733 journal = {NuMa-Report},
11759 title = {An energy-minimizing interpolation for robust multigrid methods},
11764 pages = {1632--1649},
11766 publisher = {Philadelphia, PA: SIAM, c1993-}
11775 pages = {171--182},
11779 @TechReport{ proto-fsp,
11782 title = {Report of the {Proto-FSP} {Assessment Panel for the FSP}},
11785 url = {http://www.pppl.gov/fsp/documents/Proto-FSPAssessmentReport.pdf}
11789 title = {Structure-preserving marker-particle discretizations of {Coulomb} collisions for
11790 particle-in-cell codes},
11794 doi = {10.1088/1361-6587/abe884},
11801 pages = {1050--1051},
11809 @InProceedings{ gpus-suck,
11822 isbn = {1-58113-709-5},
11823 pages = {917--924},
11832 booktitle = {IEEE/ACM International Conference on Computer-Aided Design, 2008. ICCAD 2008},
11833 date-added = {2010-08-19 15:57:06 -0500},
11834 date-modified = {2010-08-19 15:57:06 -0500},
11835 pages = {647--654},
11843 date-added = {2010-08-19 15:45:20 -0500},
11844 date-modified = {2010-08-19 15:45:20 -0500},
11846 pages = {102--111},
11854 date-added = {2010-08-19 15:45:02 -0500},
11855 date-modified = {2010-08-19 15:45:02 -0500},
11857 pages = {358--371},
11865 date-added = {2010-08-19 15:44:41 -0500},
11866 date-modified = {2010-08-19 15:44:41 -0500},
11869 title = {Real-time nonlinear finite element computations on {GPU}-application to
11876 date-added = {2010-08-19 15:44:32 -0500},
11877 date-modified = {2010-08-19 15:44:32 -0500},
11881 title = {{GPU}-based Finite Element},
11887 date-added = {2010-08-19 15:44:01 -0500},
11888 date-modified = {2010-08-19 15:44:01 -0500},
11889 journal = {Computational Science--ICCS 2009},
11890 pages = {893--903},
11898 date-added = {2010-08-19 15:43:57 -0500},
11899 date-modified = {2010-08-19 15:43:57 -0500},
11902 pages = {115--129},
11910 @Article{ corrigan-running,
11912 date-added = {2010-08-19 15:43:47 -0500},
11913 date-modified = {2010-08-19 15:43:47 -0500},
11923 note = {\url{http://mc.stanford.edu/cgi-bin/images/6/65/SC08_Volkov_GPU.pdf}},
11927 @TechReport{ cray-mvmult,
11931 number = {CMU-CS-93-173},
11940 date-added = {2010-08-19 15:43:42 -0500},
11941 date-modified = {2010-08-19 15:43:42 -0500},
11943 pages = {1--11},
11944 title = {Implementing sparse matrix-vector multiplication on throughput-oriented
11951 date-added = {2010-08-19 15:43:36 -0500},
11952 date-modified = {2010-08-19 15:43:36 -0500},
11953 journal = {{NVIDIA} Corporation, {NVIDIA} Technical Report NVR-2008-004},
11954 title = {Efficient sparse matrix-vector multiplication on {CUDA}},
11958 @Article{ cohen-fast,
11960 date-added = {2010-08-19 15:43:34 -0500},
11961 date-modified = {2010-08-19 15:43:34 -0500},
11970 date-added = {2010-08-19 15:43:32 -0500},
11971 date-modified = {2010-08-19 15:43:32 -0500},
11976 title = {Streaming multigrid for gradient-domain operations on large images},
11983 date-added = {2010-08-19 15:43:18 -0500},
11984 date-modified = {2010-08-19 15:43:18 -0500},
11986 pages = {669--704},
11997 date-added = {2010-08-19 15:43:14 -0500},
11998 date-modified = {2010-08-19 15:43:14 -0500},
11999 pages = {37--43},
12000 title = {The {GPU} used as a math co-processor in real time applications},
12006 date-added = {2010-08-19 15:42:56 -0500},
12007 date-modified = {2010-08-19 15:42:56 -0500},
12009 title = {Optimizing sparse matrix-vector multiplication on {GPU}s},
12015 date-added = {2010-08-19 15:42:45 -0500},
12016 date-modified = {2010-08-19 15:42:45 -0500},
12026 date-added = {2010-08-19 15:42:34 -0500},
12027 date-modified = {2010-08-19 15:42:34 -0500},
12037 date-added = {2010-08-19 15:42:33 -0500},
12038 date-modified = {2010-08-19 15:42:33 -0500},
12039 title = {{GPU} Acceleration of Equations Assembly in Finite Elements Method-Preliminary
12047 date-added = {2010-08-19 15:42:23 -0500},
12048 date-modified = {2010-08-19 15:42:23 -0500},
12051 pages = {234--244},
12063 date-added = {2010-08-19 15:42:21 -0500},
12064 date-modified = {2010-08-19 15:42:21 -0500},
12067 pages = {80--113},
12068 title = {A survey of general-purpose computation on graphics hardware},
12075 date-added = {2010-08-19 15:42:18 -0500},
12076 date-modified = {2010-08-19 15:42:18 -0500},
12079 pages = {667--680},
12089 (VIIP-01)},
12090 date-added = {2010-08-19 15:42:15 -0500},
12091 date-modified = {2010-08-19 15:42:15 -0500},
12093 pages = {193--202},
12100 date-added = {2010-08-19 15:42:14 -0500},
12101 date-modified = {2010-08-19 15:42:14 -0500},
12104 pages = {255--282},
12106 title = {A {G}alerkin symmetric boundary-element method in elasticity: formulation and
12114 date-added = {2010-08-19 15:42:09 -0500},
12115 date-modified = {2010-08-19 15:42:09 -0500},
12118 pages = {703--715},
12120 title = {Large steps in {GPU}-based deformable bodies simulation},
12126 author = {Goddeke, D. and Strzodka, R. and Mohd-Yusof, J. and McCormick, P. and Wobker, H.
12128 date-added = {2010-08-19 15:42:06 -0500},
12129 date-modified = {2010-08-19 15:42:06 -0500},
12132 pages = {36--55},
12142 date-added = {2010-08-19 15:41:51 -0500},
12143 date-modified = {2010-08-19 15:41:51 -0500},
12146 pages = {13--27},
12154 date-added = {2010-08-19 15:41:48 -0500},
12155 date-modified = {2010-08-19 15:41:48 -0500},
12159 title = {Method of conformal transformation for the finite-element solution of
12160 axisymmetric exterior-field problems},
12165 @Article{ turek-feast,
12168 date-added = {2010-08-19 15:41:47 -0500},
12169 date-modified = {2010-08-19 15:41:47 -0500},
12172 title = {FEAST-realization of hardware-oriented numerics for HPC simulations with finite
12178 date-added = {2010-08-19 15:41:46 -0500},
12179 date-modified = {2010-08-19 15:41:46 -0500},
12181 number = {25-28},
12182 pages = {3247--3273},
12184 title = {A space-time discontinuous {G}alerkin method for linearized elastodynamics with
12185 element-wise momentum balance},
12193 date-added = {2010-08-19 15:41:36 -0500},
12194 date-modified = {2010-08-19 15:41:36 -0500},
12201 date-added = {2010-08-19 15:41:35 -0500},
12202 date-modified = {2010-08-19 15:41:35 -0500},
12210 date-added = {2010-08-19 15:41:33 -0500},
12211 date-modified = {2010-08-19 15:41:33 -0500},
12213 pages = {1015--1026},
12215 title = {Particle systems for efficient and accurate high-order finite element
12222 booktitle = {Data Visualization 2001: proceedings of the Joint Eurographics-IEEE TCVG
12223 Symposium on Visualization in Ascona, Switzerland, May 28-30, 2001},
12224 date-added = {2010-08-19 15:41:29 -0500},
12225 date-modified = {2010-08-19 15:41:29 -0500},
12234 date-added = {2010-08-19 15:41:28 -0500},
12235 date-modified = {2010-08-19 15:41:28 -0500},
12237 pages = {247--258},
12246 date-added = {2010-08-19 15:41:27 -0500},
12247 date-modified = {2010-08-19 15:41:27 -0500},
12248 journal = {High Performance Computing--HiPC 2007},
12249 pages = {197--208},
12257 date-added = {2010-08-19 15:41:19 -0500},
12258 date-modified = {2010-08-19 15:41:19 -0500},
12261 pages = {647--670},
12262 publisher = {Oxford; New York: Pergamon Press, 1977-},
12271 computer-assisted intervention-Volume Part I},
12272 date-added = {2010-08-19 15:41:17 -0500},
12273 date-modified = {2010-08-19 15:41:17 -0500},
12274 organization = {Springer-Verlag},
12275 pages = {701--708},
12276 title = {Real-time nonlinear finite element analysis for surgical simulation using
12283 date-added = {2010-08-19 15:41:16 -0500},
12284 date-modified = {2010-08-19 15:41:16 -0500},
12286 number = {1-2},
12287 pages = {169--175},
12297 date-added = {2010-08-19 15:41:15 -0500},
12298 date-modified = {2010-08-19 15:41:15 -0500},
12300 pages = {980--980},
12301 title = {Active part-decomposition, shape, and motion estimation of articulated objects: A
12302 physics-based approach},
12309 date-added = {2010-08-19 15:41:14 -0500},
12310 date-modified = {2010-08-19 15:41:14 -0500},
12312 pages = {44--51},
12313 title = {A {GPU}-friendly method for haptic and graphic rendering of deformable objects},
12320 date-added = {2010-08-19 15:41:14 -0500},
12321 date-modified = {2010-08-19 15:41:14 -0500},
12330 date-added = {2010-08-19 15:41:13 -0500},
12331 date-modified = {2010-08-19 15:41:13 -0500},
12334 title = {{LU-GPU}: Efficient algorithms for solving dense linear systems on graphics
12344 date-added = {2010-08-19 15:41:12 -0500},
12345 date-modified = {2010-08-19 15:41:12 -0500},
12347 pages = {73--82},
12357 date-added = {2010-08-19 15:41:11 -0500},
12358 date-modified = {2010-08-19 15:41:11 -0500},
12360 pages = {79--84},
12368 date-added = {2010-08-19 15:41:03 -0500},
12369 date-modified = {2010-08-19 15:41:03 -0500},
12370 pages = {425--432},
12371 title = {Pixel-exact rendering of spacetime finite element solutions},
12377 date-added = {2010-08-19 15:41:01 -0500},
12378 date-modified = {2010-08-19 15:41:01 -0500},
12381 pages = {451--460},
12383 title = {Porting a high-order finite-element earthquake modeling application to NVIDIA
12391 date-added = {2010-08-19 15:40:59 -0500},
12392 date-modified = {2010-08-19 15:40:59 -0500},
12395 pages = {368--392},
12405 date-added = {2010-08-19 15:40:59 -0500},
12406 date-modified = {2010-08-19 15:40:59 -0500},
12409 pages = {707--716},
12411 title = {An improved scheme of an interactive finite element model for 3D soft-tissue
12419 date-added = {2010-08-19 15:40:57 -0500},
12420 date-modified = {2010-08-19 15:40:57 -0500},
12424 title = {High-speed nonlinear finite element analysis for surgical simulation using
12433 date-added = {2010-08-19 15:40:55 -0500},
12434 date-modified = {2010-08-19 15:40:55 -0500},
12443 date-added = {2010-08-19 15:40:54 -0500},
12444 date-modified = {2010-08-19 15:40:54 -0500},
12446 number = {3-4},
12447 pages = {219--227},
12455 % ----------------------------------------------------------------------------------------------------------------
12470 pages = {1--25}
12474 title = {Algorithm 832: {UMFPACK} V4.3---An Unsymmetric-Pattern Multifrontal Method},
12479 pages = {196--199},
12499 pages = {251--277}
12504 title = {Convergence of the multigrid full approximation scheme including the {V}--cycle},
12508 pages = {663--686}
12521 note = {Held bi-annually},
12551 number = {GMD-Studien Nr. 85},
12556 title = {Coarse-Grid Correction for Nonelliptic and Singular Perturbation Problems},
12561 pages = {1682--1699},
12577 title = {Implicit-Explicit Methods for Time-Dependent Partial Differential Equations},
12581 pages = {797--823},
12592 pages = {1670--1690},
12598 title = {Implicitly Balanced Solution of the Two-Phase Flow Equations Coupled to Nonlinear
12602 pages = {104--132},
12608 title = {A Fully Implicit Hybrid Solution Method for a Two-Phase Thermal-Hydraulic Model},
12611 pages = {531--539},
12620 url = {http://conferences.esa.int/05c26/Seminar-2005-09-28-SALOME.pdf},
12628 both {RELAP5} and {TRAC-M}},
12635 title = {A methodology for the coupling of {RAMONA-3B} neutron kinetics and {TRAC-BF1}
12636 thermal-hydraulics},
12639 pages = {621--634},
12643 @InProceedings{ og-1996,
12645 title = {{EVENT}: A Multidimensional Finite Element-Spherical Harmonics Radiation
12657 @Article{ wo-2000,
12663 pages = {466--470},
12667 @Unpublished{ gnep-web,
12674 @Book{ lewis-miller-1984,
12684 title = {{AX-1}, A COMPUTING PROGRAM FOR COUPLED NEUTRONICS-HYDRODYNAMICS CALCULATIONS ON
12685 THE {IBM-704}},
12688 pages = {113--115},
12694 title = {Coupled {CFD/CSM} vibration design methodology for generation {IV} long-life fuel
12707 @Misc{ subsurface-workshop-ref,
12710 note = {January 9--12, 2007, Bethesda, MD, see \url{http://subsurface2007.labworks.org/}}
12725 howpublished = {see \url{http://www.ostp.gov/nstc/html/HECRTF-FINAL_051004.pdf}}
12729 title = {{Facilities for the Future of Science: A Twenty-Year Outlook}},
12733 \url{http://www.sc.doe.gov/Scientific_User_Facilities/History/20-Year-Outlook-screen.pdf}}
12736 @PhDThesis{ karpeev-thesis,
12747 publisher = {Springer-Verlag},
12752 pages = {185--212}
12757 title = {{POET} ({P}arallel {O}bject-Oriented {E}nvironment and {T}oolkit) and Frameworks
12763 @Misc{ pseware-web-page,
12771 title = {High-performance language interoperability for scientific computing through
12781 @Misc{ babel-web-page,
12787 @Misc{ infospheres-web-page,
12802 title = {Private communication via petsc-maint email support}
12805 @Unpublished{ cumulvs-web-page,
12817 pages = {271--290},
12823 title = {The pressure-corrected ICE finite element method for compressible flows on
12827 pages = {659--685},
12833 title = {{CUMULVS}: Providing Fault-Tolerance, Visualization, and Steering of Parallel
12844 title = {Inter-Agency Workshop on HPC Resilience at Extreme Scale},
12854 pages = {116--148},
12873 number = {02-4-12}
12879 title = {{PDELab}: An Object-Oriented Framework for Building Problem Solving Environments
12883 number = {CSD-TR-94-021}
12886 @Unpublished{ ilu-web-page,
12888 title = {{I}nter-{L}anguage {U}nification Reference Manual},
12892 @Unpublished{ doe2k-web-page,
12898 @Misc{ pvode-web-page,
12906 title = {Component Software: Beyond Object-Oriented Programming},
12925 @Unpublished{ petsc:use-by-external-packages,
12946 @Unpublished{ flash-web-page,
12954 @Unpublished{ esi-web-page,
12960 @Unpublished{ infobus-web-page,
12966 @Unpublished{ xray-web-page,
12975 title = {Language Interoperability Mechanisms for High-Performance Scientific
12978 booktitle = {Proceedings of the SIAM Workshop on Object Oriented Methods for Inter-operable
12981 pages = {30-39}
12996 booktitle = {Proceedings of the SIAM Workshop on Object Oriented Methods for Inter-operable
12999 pages = {215-224}
13023 title = {{DAGH}: A Data-Management Infrastructure for Parallel Adaptive Mesh Refinement
13036 pages = {462--478}
13041 title = {An Integrated Runtime and Compile-time Approach for Parallelizing Structured and
13049 @Article{ gropp-lusk-doss-skjellum,
13051 title = {A high-performance, portable implementation of the {MPI} Message Passing
13056 pages = {789--828}
13065 pages = {379--386},
13070 author = {X.-C. Cai and M. Sarkis},
13076 pages = {792-797}
13086 pages = {1209--1231},
13092 author = {Xiao-Chuan Cai and Youcef Saad},
13096 number = {Preprint 93-027 },
13104 publisher = {Addison-Wesley}
13107 @Book{ mpi-complete,
13108 author = {Marc Snir and Steve Otto and Steven Huss-Lederman and David Walker and Jack
13115 @Unpublished{ tcl-tk-web-page,
13122 @Misc{ mpich-web-page,
13130 @Article{ mpi-final,
13132 title = {{MPI}: A Message-Passing Interface Standard},
13137 key = {MPI Standard - final}
13140 @Unpublished{ npb-web-page,
13143 note = {http://www.nas.nasa.\-gov/\-NAS/\-NPB/\-index.html},
13151 publisher = {Prentice-Hall},
13156 @Book{ p4-book,
13170 pages = {87--113},
13179 pages = {1049--1062},
13184 @Article{ p4-paper,
13189 Division preprint P362-0493)},
13197 number = {TM-11130},
13206 number = {ANL-91/15},
13212 @TechReport{ p4-manual,
13216 number = {ANL-92/17},
13219 key = {p4-Manual}
13226 pages = {578--587},
13236 pages = {68-79},
13243 title = {Run-Time Parallelization and Scheduling of Loops},
13246 pages = {604-612},
13251 @InProceedings{ disz-lusk:wamtrace,
13256 pages = {46--53}
13259 @InProceedings{ gorlick-kesselman:gauge,
13283 @Book{ taylor-chandy:pcn,
13290 @Book{ foster-taylor:strand,
13293 publisher = {Prentice-Hall},
13302 title = {The Aurora OR-Parallel Prolog System},
13307 pages = {243--271}
13312 title = {Roo---a Parallel Theorem Prover},
13314 number = {MCS--TM--149},
13318 @TechReport{ heath-etheridge:vppp,
13322 number = {ORNL TM-11813},
13330 number = {ANL/MCS--P287--0192},
13339 number = {ORNL TM-12125},
13349 pages = {247--262}
13359 pages = {3-21},
13362 annote = {Additive {S}chwarz. Surveys recent (1989) results; some comments on 3-d and how
13363 many approaches may be cast in the form of additive {S}chwarz-subspace form. 58
13382 number = {MCS-P206-0191},
13391 publisher = {Springer-Verlag},
13396 pages = {229--245}
13405 pages = {302--318}
13413 number = {YALE/DCS/RR-265},
13423 pages = {45--52},
13433 Urbana-Champaign},
13438 @TechReport{ pde-user-ref,
13444 number = {ANL-93/40},
13448 @TechReport{ bs-user-ref,
13455 number = {ANL-95/48}
13458 @TechReport{ snes-user-ref,
13464 number = {ANL/MCS-TM-193},
13468 @TechReport{ sles-user-ref,
13474 number = {ANL-93/8},
13478 @TechReport{ chameleon-user-ref,
13484 number = {ANL-93/23},
13494 pages = {2194--2215}
13505 @TechReport{ ksp-user-ref,
13507 title = {Users Manual for {KSP}: Data-Structure-Neutral Codes Implementing {K}rylov Space
13512 number = {ANL-93/30},
13516 @TechReport{ mpi-chameleon,
13518 title = {A Test Implementation of the {MPI} Draft Message-Passing Standard},
13522 number = {ANL-92/47},
13526 @TechReport{ blockcomm-fortran,
13532 number = {ANL-93/00 (to appear)},
13542 number = {ANL-93/00},
13549 title = {The {Z}ipcode message-passing system},
13565 pages = {29--39},
13575 pages = {289--304},
13585 pages = {835--850},
13595 pages = {57--100}
13604 number = {90-2},
13628 title = {Bi-{CGSTAB}: A fast and smoothly converging variant of {Bi-CG} for the solution
13633 pages = {631--644}
13642 pages = {1--4}
13645 @Manual{ ibm-essl,
13650 key = {IBM-ESSL}
13653 @Manual{ ibm-eui,
13659 key = {IBM-EUI}
13662 @Manual{ ibm-euih,
13667 key = {IBM-EUIH}
13671 title = {Document for a Standard Message-Passing Interface},
13674 number = {CS-93-214},
13680 @Unpublished{ mpi-final-web,
13682 title = {{MPI}: A Message-Passing Interface Standard},
13683 note = {http://www.mcs.anl.gov/mpi/mpi-report/mpi-report.html},
13688 @Book{ hockney-jesshope,
13695 @Book{ cm-fortran,
13697 title = {Users Manual for CM-Fortran},
13704 author = {Mark Yan-Ming Chang and Martin H. Schultz},
13706 number = {YALEU/DCS/RR-994},
13714 title = {Applications-Driven Parallel {I/O}},
13717 pages = {462--471}
13732 volume = {C-24},
13736 pages = {1145--1155},
13745 publisher = {Addison-Wesley Reading, Massachusetts}
13751 publisher = {Addison-Wesley},
13756 @InProceedings{ gropp-lusk:unix-tools,
13761 pages = {56--62}
13771 pages = {551--560}
13791 pages = {91--111}
13794 @Unpublished{ cweb-code,
13797 note = {CWEB is available at ftp://pip.shsu.edu/tex-archive/web/c\_cpp/cweb}
13808 pages = {753--773}
13817 pages = {654-669},
13827 number = {ANL-92/46},
13833 title = {Parallel Solution of the Anisotropic {G}inzburg-{L}andau Model},
13846 key = {preosti93 ! GL-tilt3d}
13855 key = {more93 ! MINPACK-2}
13864 pages = {450-481}
13867 @Book{ using-mpi,
13874 @Book{ using-mpi2,
13887 pages = {409-436}
13892 title = {{CGS}, A Fast {L}anczos-type Solver for Nonsymmetric Linear Systems},
13896 pages = {36-52}
13906 pages = {631-644}
13911 title = {A Transpose-Free Quasi-Minimal Residual Algorithm for Non-{H}ermitian Linear
13916 pages = {470-482}
13925 pages = {367-379}
13931 publisher = {Addison-Wesley},
13933 pages = {367-379}
13946 publisher = {Springer-Verlag},
13955 publisher = {Springer-Verlag},
13963 title = {Continuation-conjugate Gradient Methods for the Least Squares Solution of
13968 pages = {793-832}
13973 title = {Discretized {N}ewton-Relaxation Solution of High Resolution Flux-Difference Split
13976 misc = {AIAA-91-1539},
13977 pages = {134-145},
13984 Architecture-Independent Development of Structured Grid Applications},
13994 booktitle = {Proceedings of the Second Annual Object-Oriented Numerics Conference},
14005 pages = {61--90},
14016 pages = {553--558},
14028 publisher = {Springer-Verlag},
14033 % collection of examples on O-O in numerical computing
14036 title = {Object-Oriented Design of Preconditioned Iterative Methods in {Diffpack}},
14039 pages = {50--80},
14048 % ***** General intro to object-oriented numerics for "FORTRAN programmers"
14053 title = {Object-Oriented Numerics},
14067 pages = {91--118},
14075 booktitle = {Scientific Computing in Object-Oriented Parallel Environments},
14078 publisher = {Springer--Verlag},
14080 pages = {161--168},
14098 booktitle = {Proceedings of the SIAM Workshop on Object Oriented Methods for Inter-operable
14101 pages = {165-173},
14105 @Book{ scalapack-user-guide,
14120 editor = {C.-H. Lai et al.},
14133 pages = {1--21}
14136 % -------------------------------------------------------------------------
14137 % -------------------------------------------------------------------------
14143 pages = {448--474},
14150 title = {Discretized {N}ewton-Relaxation Solution of High Resolution Flux-Difference Split
14153 misc = {AIAA-91-1539},
14154 pages = {134-145},
14164 pages = {16--32}
14169 title = {Users Manual for CM-Fortran},
14190 title = {Computer Aided Parallelization Tools ({CAPTools}) - Conceptual Overview and
14194 pages = {197-226},
14198 @Misc{ nastran-web-page,
14223 @InProceedings{ pooma-atlas,
14226 title = {{POOMA}: A High-Performance Distributed Simulation Environment for Scientific
14233 % ---------------------------------------------------------------------------------
14235 @Misc{ mgnet-web-page,
14238 note = {See {\tt http://\-www.mgnet.org}}
14241 @Misc{ dagh-web-page,
14247 @Misc{ parasol-web-page,
14250 note = {See {\tt http://\-www.genias.de/\-projects/\-parasol}}
14253 @Misc{ pooma-web-page,
14255 note = {See {\tt http://\-www.acl.lanl.gov/pooma}}
14258 @Misc{ mudpack-web-page,
14261 note = {See {\tt http://\-www.scd.ucar.edu/\-css/\-software/\-mudpack}}
14264 @Misc{ pellpack-web-page,
14267 note = {See {\tt http://\-www.cs.purdue.edu/\-research/\-cse/\-pellpack/}}
14279 @Misc{ nhse-web-page,
14280 author = {{National High-Performance Software Exchange Web page}},
14281 note = {See {\tt http://\-www.nhse.org}}
14284 @Misc{ doug-web-page,
14287 note = {See {\tt http://\-www.maths.bath.ac.uk/\~{ }parsoft/\-doug/}}
14299 @Misc{ ug-web-page,
14301 note = {See {\tt http://\-cox.iwr.uni-heidelberg.de/\~{ }ug/}}
14306 Rentz-Reichert and C. Wieners},
14307 title = {{UG} -- A Flexible Software Toolbox for Solving Partial Differential Equations},
14314 @Misc{ vecfem-web-page,
14317 note = {See {\tt http://\-wwwmaths.anu.edu.au/\-\~{ }vecfem/}}
14320 @Misc{ atlas-web-page,
14323 howpublished = {\url{http://math-atlas.sourceforge.net}}
14326 @Misc{ fenics-web-page,
14334 @Misc{ matlab-web-page,
14340 @Misc{ phipac-web-page,
14344 note = {See {\tt http://\-www.icsi.berkeley.edu/\-\~{ }bilmes/\-phipac/}}
14354 @Unpublished{ kelp-web-page,
14357 note = {See {\tt http://\-www-cse.ucsd.edu/\-groups/\-hpcl/\-scg/\-kelp/}}
14362 title = {The Use of Object-Oriented Design Patterns in the {SAMRAI} Structured {AMR}
14364 booktitle = {Proceedings of the SIAM Workshop on Object-Oriented Methods for Inter-Operable
14366 pages = {235-244},
14371 @Unpublished{ samrai-web-page,
14374 note = {See {\tt http://www.llnl.gov/\-CASC/SAMRAI}}
14377 @Misc{ overture-web-page,
14385 title = {Overture: An Object-Oriented Framework for Solving Partial Differential Equations
14388 booktitle = {Proceedings of the SIAM Workshop on Object Oriented Methods for Inter-operable
14391 pages = {215-224},
14401 pages = {61--90},
14412 pages = {91--112},
14416 issn = {0036-1445 (print), 1095-7200 (electronic)},
14421 matrix-vector multiplication, matrix-matrix multiplication and the solution of
14429 keywords = {computer programming --- Algorithms; dense matrices; linear algebra algorithms;
14452 publisher = {Springer-Verlag},
14463 pages = {565--581},
14469 title = {{Multi-grid methods and applications}},
14472 issn = {0179-3632},
14496 doi = {10.1016/S1570-579X(01)80025-2},
14517 @Misc{ fftw-web-page,
14530 pages = {216--231},
14542 @Unpublished{ spai-web-page,
14555 pages = {838-853}
14565 pages = {235-244}
14570 title = {The sintering of two particles by surface and grain boundary diffusion - a
14571 three-dimensional numerical study},
14586 title = {A Domain-Specific Languages for Regular Sets of Strings and Trees},
14587 booktitle = {Proceedings of the Conference on Domain-Specific Languages},
14600 pages = {170-174},
14620 @Misc{ sundials-user-ref,
14626 number = {UCRL-JP-200037},
14637 pages = {363--396},
14642 title = {{CVODES}, the sensitivity-enabled {ODE} solver in {SUNDIALS}},
14656 pages = {354 -- 365}
14666 pages = {138 -- 143}
14673 number = {SAND2005-0662},
14677 @TechReport{ kinsol-user-ref,
14682 number = {UCRL-ID-131185},
14687 author = {J.-M. Fiard and T. Manteuffel and S. McCormick},
14688 title = {First-order system least squares {(FOSLS)} for convection-diffusion problems:
14693 pages = {1958--1979}
14699 title = {Performance Optimizations and Bounds for Sparse Matrix-Vector Multiply},
14712 pages = {503--534},
14723 pages = {1--102}
14728 title = {The post-processing approach in the finite element method, {I}: Calculations of
14733 pages = {1085--1109}
14738 title = {The post-processing approach in the finite element method, {II}: The calculation
14743 pages = {1111--1129}
14748 title = {The post-processing approach in the finite element method, {III}: A posteriori
14753 pages = {2311--2324}
14756 @Unpublished{ jtb-web-page,
14771 @Unpublished{ ply-web-page,
14772 title = {{PLY (Python Lex-Yacc)}},
14778 @Misc{ adic-web-page,
14790 note = {Preprint ANL/MCS-P944-0402, Argonne National Laboratory, April 2002},
14799 pages = {66--93},
14803 @Misc{ veltisto-web-page,
14815 pages = {71--85},
14824 number = {97-060},
14829 @Misc{ parmetis-web-page,
14836 @Misc{ sparskit-web-page,
14842 @Misc{ dscpack-web-page,
14848 @Misc{ gaussian-web-page,
14855 @Book{ lapack-user-guide,
14869 address = {Richland, Washington 99325-0999 USA},
14877 number = {SAND2011-3282},
14881 @Misc{ scidac-web-page,
14903 howpublished = {\url{http://www.tstt-scidac.org}},
14937 @Misc{ grace-web-page,
14951 title = {A semi-{L}agrangian {C}rank-{N}icholson algorithm for the numerical solution of
14952 advection-diffusion problems},
14971 pages = {720-755}
14983 booktitle = {Proceedings of the SIAM Workshop on Object Oriented Methods for Inter-operable
14989 @TechReport{ hypre-users-manual,
15006 title = {A Light-weight API for Portable Multicore Programming},
15008 Network-Based Processing (PDP)},
15009 pages = {601--606},
15018 pages = {620--628},
15040 issn = {0098-3500},
15041 pages = {397--423},
15054 title = {{Triangle: A Two-Dimensional Quality Mesh Generator and Delaunay Triangulator}},
15055 howpublished = {\url{http://www-2.cs.cmu.edu/~quake/triangle.html}},
15061 title = {{TetGen: A Quality Tetrahedral Mesh Generator and Three-Dimensional Delaunay
15090 url = {http://www.dune-project.org/},
15091 howpublished = {\url{http://www.dune-project.org/}},
15105 howpublished = {{\tt http://code.google.com/p/cusp-library/}},
15118 title = {{WIT}: {I}ntegrated system for high-throughput genome sequence analysis and
15123 pages = {123-125},
15134 pages = {187--209},
15145 pages = {GC11-GC26},
15147 number = {1-2}
15153 institution = {University of Illinois at Urbana-Champaign}
15161 pages = {197--214},
15173 pages = {1239--1250},
15183 pages = {2256--2281},
15189 title = {Solution of parabolic equations by backward Euler-mixed finite element methods on
15195 pages = {423--442},
15207 publisher = {Spinger-Verlag}
15215 pages = {581--613},
15221 title = {Multi-Level Adaptive Solutions to Boundary-Value Problems},
15225 pages = {333--390},
15235 pages = {53--147},
15240 title = {Multi-Level Adaptive Techniques(MLAT) for singular-perturbation problems},
15244 pages = {53--142},
15255 pages = {1570--1592},
15281 pages = {91--110}
15291 pages = {681--703}
15296 title = {Tight-binding molecular-dynamics simulation of impurities in ultrananocrystalline
15316 title = {Convergence analysis of pseudo-transient continuation},
15320 pages = {508--523}
15329 pages = {472--514},
15336 title = {Eigenvalue Computation from the Optimization Perspective: On {Jacobi-Davidson,
15339 number = {ANL/MCS-P1074-0803},
15347 Detailed analysis of one-dimensional applications},
15353 author = {P. Singh and D. D. Joseph and T. Hesla and R. Glowinski and T.-W. Pan},
15356 journal = {J. Non-Newtonian Fluid Mech.},
15358 pages = {165--188},
15364 title = {Interrogations of Direct Numerical Simulations of Sloid-Liquid Flows},
15365 publisher = {Springer-Verlag},
15371 @Misc{ triangle-web-page,
15374 note = {\url{http://www-2.cs.cmu.edu/~quake/triangle.html}}
15385 publisher = {Springer-Verlag},
15386 pages = {203--222},
15397 pages = {118--123},
15403 title = {Implicit Integration of the Time-Dependent {Ginzburg-Landau} Equations of
15407 pages = {1944--1959},
15416 pages = {219--232},
15422 title = {Rotational Hysteresis of Exchange-Spring Magnets},
15425 pages = {2339--2343},
15443 pages = {308--313},
15447 @InProceedings{ petsc-efficient,
15454 pages = {163--202},
15459 author = {Patrick R. Amestoy and Ian S. Duff and Jean-Yves L'Excellent and Jacko Koster},
15464 pages = {15--41},
15469 title = {{Performance and Scalability of the Block Low-Rank Multifrontal Factorization on
15471 author = {P.R. Amestoy and A. Buttari and J.-Y. L'Excellent and T. Mary},
15475 pages = {2:1--2:26},
15490 title = {{SuperLU\_DIST}: a scalable distributed-memory sparse direct solver for
15497 pages = {110--140}
15503 number = {LBNL-44289},
15509 @TechReport{ trilinos-overview03,
15516 number = {SAND2003-2927},
15520 @TechReport{ trilinos-users-guide,
15524 number = {SAND2003-2952},
15534 pages = {2194--2215},
15542 number = {UCRL-JC-133948},
15551 pages = {215--226},
15559 title = {Jacobian-free {Newton-Krylov} Methods: A Survey of Approaches and Applications},
15562 pages = {357-397}
15571 pages = {15--36}
15576 title = {New Physics-based Preconditioning of Implicit Methods for Non-Equilibrium
15584 title = {Physics-based Preconditioning and the {Newton-Krylov} Method for Non-Equilibrium
15588 pages = {743--765},
15594 title = {{Framework Application for Core-Edge Transport Simulations (FACETS)}},
15595 note = {Proto-FSP project, see \url{http://www.facetsproject.org}}
15601 note = {Proto-FSP project, see \url{http://www.cims.nyu.edu/cpes}}
15610 @Unpublished{ groundwater-scidac2:web,
15612 title = {Modeling Multiscale-Multiphase-Multicomponent Subsurface Reactive Flows Using
15619 title = {{Modeling Multiscale-Multiphase-Multicomponent Subsurface Reactive Flows Using
15624 @Misc{ accel-scidac2-solicitation,
15626 title = {{Program Announcement LAB 07-09, SciDAC: Accelerator Science and Simulation}},
15642 title = {Synergia: An accelerator modeling tool with {3-D} space charge},
15646 pages = {229-248}
15673 @Misc{ post-fsp-report,
15690 @Book{ hazeltine-meiss-book,
15694 publisher = {Addison-Wesley, Redwood City, CA}
15704 pages = {239--251}
15713 pages = {326--350}
15729 @Unpublished{ dvi-materials:project,
15731 title = {Large-Scale Differential Variational Inequalities for Heterogeneous Materials},
15732 note = {{SciDAC}-e project},
15752 title = {Two-Dimensional Electric Fields and Drifts near the Magnetic Separatrix in
15763 title = {Low-to-High Confinement Transition Simulations in Divertor Geometry},
15778 pages = {1467 -- 1480},
15802 title = {A Component Architecture for High-Performance Scientific Computing},
15803 journal = {Intl. J. High-Perf. Computing Appl.},
15805 pages = {163--202},
15810 @Misc{ cca-forum:homepage,
15812 note = {\url{http://www.cca-forum.org}},
15816 @Misc{ petsc:driven-cavity-example,
15822 @Misc{ petsc-dm:webpage,
15829 @Misc{ unic-ref,
15835 % -----------------------------------------------------------------------
15837 @Book{ greve-blatter,
15845 @Misc{ doe-isicles,
15847 title = {Ice {S}heet {I}nitiative for {CL}-imate {E}xtreme{S}},
15852 title = {TChem-a software toolkit for the analysis of complex kinetic models},
15854 journal = {Sandia Report, SAND2011-3282},
15858 @Misc{ chemkin-website,
15860 title = {ANSYS Chemkin-Pro Website},
15861 howpublished = {\url{http://www.ansys.com/products/fluids/ansys-chemkin-pro}},
15865 @Misc{ mct-website,
15874 Multi-Physics Parallel Coupled Models},
15877 pages = {277--292}
15881 title = {Computational performance of ultra-high-resolution capability in the Community
15888 pages = {5--16},
15900 pages = {148 -- 156},
15903 publisher = {Springer-Verlag}
15914 publisher = {Springer-Verlag}
15918 title = {New generation of multi-scale {NWP} system {(GRAPES)}: General scientific
15925 pages = {3433--3445},
15939 publisher = {Springer-Verlag}
15945 title = {A Component-based Scientific Toolkit for Reacting Flows},
15957 pages = {1115--1130}
15961 author = {M. Paraschivoiu and X.-C. Cai and M. Sarkis and D. P. Young and D. Keyes},
15962 title = {Multi-domain multi-model formulation for compressible flows: Conservative
15964 note = {AIAA Paper 99-0784},
15976 title = {A distributed computing portal for coupling multi-physics and multiple domains in
15979 number = {TICAM 00-03},
15987 number = {TICAM 00-02},
15997 pages = {508--560},
16002 author = {X.-C. Cai and M. Paraschivoiu and M. Sarkis},
16003 title = {An explicit multi-model compressible flow formulation based on the full potential
16007 editor = {C-H. Lai and P. Bjorstad and M. Cross and O. Widlund},
16013 title = {Coupling Multi-Component Models with {MPH} on Distributed Memory Computer
16017 pages = {329--240},
16022 @InProceedings{ uiuc-rocket-center02,
16025 booktitle = {Proceedings of the AIAA Joint Propulsion Conference, AIAA2002-4345},
16034 title = {A Physics-Based Software Framework for Sun-Earth Connection Modeling},
16036 booktitle = {Multiscale Coupling of Sun-Earth Processes, Proceedings of the Conference on the
16037 Sun-Earth Connection},
16040 pages = {383--397}
16053 note = {University of Illinois at Urbana-Champaign, see \url{http://www.csar.uiuc.edu}}
16074 @TechReport{ utah-csafe03,
16076 title = {An Eulerian-Lagrangian Approach for Large Deformation Fluid Structure Interaction
16085 title = {Toward a Multi-Model Hierarchy to Support Multiscale Simulations},
16089 pages = {1--41},
16090 note = {also available as SCOREC Report 2007-2, Rensselaer Polytechnic Institute}
16108 @Misc{ open-grid-forum:web,
16116 title = {Nonlinear Object-Oriented Solutions {(NOX)}},
16132 pages = {538--559}
16141 pages = {753--770},
16150 pages = {1075--1095},
16156 title = {Toward an Integrated Multimodeling Interface: A Human-Computer Interface Approach
16176 pages = {604--606}
16181 title = {Visualization of Program-Execution Data for Deployed Software},
16184 pages = {67--76}
16201 pages = {155--182},
16207 title = {Modeling with collaborating {PDE} solvers - Theory and practice},
16211 pages = {87--95}
16227 pages = {198--213},
16232 title = {Extensibe Component-Based Architecture for {FLASH}, a Massively Parallel
16238 issue = {10 -- 11},
16239 pages = {512 -- 522},
16253 publisher = {Wiley-Interscience},
16259 title = {Managing Application Complexity in the SAMRAI Object-Oriented Framework},
16262 pages = {347--368},
16272 pages = {???--???}
16283 abstract = {{Design Patterns is a modern classic in the literature of object-oriented
16289 tutorial but a catalog that you can use to find an object-oriented design pattern
16290 that's appropriate for the needs of your particular application--a selection for
16291 virtuoso programmers who appreciate (or require) consistent, well-engineered
16292 object-oriented designs.} {Now on CD, this internationally acclaimed bestseller is
16299 cross-references; accessed through a standard web browser; Java-based dynamic
16303 First published in 1995, this landmark work on object-oriented software design
16306 become an essential resource for anyone developing reusable object-oriented
16308 now available on CD-ROM. This electronic version of Design Patterns enables
16310 online reference for creating reusable object-oriented software.
16314 recurring designs in object-oriented systems. All patterns are compiled from
16315 real-world examples and include code that demonstrates how they may be implemented
16316 in object-oriented programming languages such as C++ and Smalltalk. Readers who
16318 mechanism and ready-to-install patterns.}},
16320 citeulike-article-id={115158},
16323 keywords = {1995 algorithms architecture book books computer computing design design-pattern
16324 design-patterns design_patterns designpatterns development diplom entwurfsmuster
16325 four gang gof java mathgamespatterns no-tag object object-orientation
16326 object-oriented of oo-patterns oop oriented pattern patterns programming se
16327 software software-development software-engineering software_design
16330 publisher = {{Addison-Wesley Professional}},
16332 url = {http://www.amazon.ca/exec/obidos/redirect?tag=citeulike04-20{\&}path=ASIN/0201633612},
16342 isbn = {0-89791-816-9},
16360 importance in modern physics--such as in gauge theory. This book, a succinct
16371 citeulike-article-id={712999},
16377 title = {The Topology of Fibre Bundles. (PMS-14)},
16378 url = {http://www.amazon.ca/exec/obidos/redirect?tag=citeulike04-20{\&}path=ASIN/0691005486},
16392 title = {{MOAB}: A Mesh-Oriented Database},
16396 number = {SAND2004-1592},
16403 title = {{MOAB}-{SD}: Integrated Structured and Unstructured Mesh Representation},
16406 pages = {286--293},
16432 number = {48-49},
16433 pages = {4915--4950},
16438 title = {Parallel mesh adaptation for high-order finite element methods with curved element geometry},
16442 pages = {271--286},
16452 pages = {210--221},
16464 pages = {55--86},
16473 note = {\url{http://www.math.tu-cottbus.de/~berti/diss}}
16482 pages = {213--245},
16492 pages = {141--183},
16511 @Misc{ hlib-web-page,
16520 title = {A sparse matrix arithmetic based on {$\mathcal H$}-matrices. Part {I}:
16521 Introduction to {$\mathcal H$}-matrices},
16524 pages = {89--108},
16529 title = {A {G}reen's function preconditioner for the steady-state {N}avier-{S}tokes
16538 title = {Existence of {$\mathcal H$}-matrix approximants to the inverse {FE}-matrix of
16539 elliptic operators with {$L^\infty$}-coefficients},
16544 pages = {1--28},
16551 H$}-matrix approximation},
16556 pages = {179--188},
16566 number = {2003--21},
16578 pages = {422--455}
16601 issn = {0098-3500},
16602 pages = {417--444},
16615 issn = {0098-3500},
16627 pages = {35--51},
16636 number = {CSD-00-1103},
16647 pages = {56--62},
16668 pages = {401--419},
16678 pages = {1--155},
16691 issn = {0098-3500},
16692 pages = {502--516},
16705 issn = {0098-3500},
16706 pages = {223--235},
16724 pages = {363--381},
16730 title = {Implementing the MyFEM Embedded Domain-specific Language},
16731 booktitle = {Proceedings of the Second International Workshop on Domain-specific Program
16739 date-added = {2008-02-27 12:23:39 +0000},
16740 date-modified = {2008-02-27 12:24:02 +0000},
16745 pages = {85-103},
16747 title = {An Efficient Program for Many-Body Simulation},
16758 pages = {253-287},
16766 date-added = {2008-02-15 18:43:55 +0000},
16767 date-modified = {2008-02-26 20:09:11 +0000},
16768 doi = {10.1016/0021-9991(87)90140-9},
16772 pages = {325--348},
16777 bdsk-url-1 = {citeseer.ist.psu.edu/greengard87fast.html}
16787 pages = {229--269}
16799 pages = {19314--19319}
16804 title = {Derivation of {P}oisson and {N}ernst-{P}lanck equations in a bath and channel
16815 publisher = {Springer-Verlag},
16822 title = {The adaptive multilevel finite element solution of the {P}oisson-{B}oltzmann
16832 publisher = {McGraw-Hill},
16840 title = {A Comparison of {P}article-{P}article, {P}article-{M}esh and {E}wald Methods for
16846 pages = {11--20}
16853 isbn = {0-89871-462-1},
16865 pages = {1--26},
16871 title = {Domain decomposition preconditioners for multiscale flows in high-contrast
16877 pages = {1461--1483},
16886 isbn = {0-38795-451-1},
16898 isbn = {0-89871-361-7},
16899 isbn-13 = {978-0-89871-361-9},
16901 mrclass = {65-01 (65-02 65Fxx)},
16905 bibsource = {ftp://ftp.math.utah.edu/pub/bibnet/authors/t/trefethen-lloyd-n.bib}
16912 isbn = {978-0-26202-839-4},
16935 pages = {673--684},
16941 title = {Algorithm 795: PHCpack: a general-purpose solver for polynomial systems by
16946 issn = {0098-3500},
16947 pages = {251--276},
16958 editor = {Alicia Dickenstein and Frank-Olaf Schreyer and Andrew J. Sommese},
16959 pages = {133--152},
16960 publisher = {Springer-Verlag},
16965 author = {N. Phan-Thien and R.~I. Tanner},
16967 journal = {J. Non-Newt. Fluid Mech.},
17017 pages = {29-35}
17023 journal = {Journal of Non-Newtonian Fluid Mechanics},
17026 pages = {361--385}
17044 pages = {523--541}
17048 author = {S. Byna and X.-H. Sun and W. Gropp and R. Thakur},
17049 title = {Predicting Memory-Access Cost Based on Data-Access Patterns},
17077 \url{http://www.ofes.fusion.doe.gov/More_HTML/FESAC/FESAC11-02/Dahlburg.pdf}}
17086 url = {http://science.energy.gov/~/media/ascr/pdf/program-documents/docs/Brown_report_may_08.pdf}
17095 url = {http://extremecomputing.labworks.org/SumReps/Crosscutting-SumRep-PNNL_20168.pdf}
17098 @Misc{ extreme-scale-solvers-workshop12,
17101 title = {Report on the Workshop on Extreme-Scale Solvers: Transitions to Future
17104 note = {{Washington, DC}, March 8-9, 2012},
17105 url = {http://science.energy.gov/~/media/ascr/pdf/program-documents/docs/reportExtremeScaleSolvers2012.pdf},
17144 @Misc{ petsc-rd100-2009,
17149 \url{http://www.rdmag.com/Awards/RD-100-Awards/2009/07/PETSc-Release-3-0-Expands-Capabilities}}
17152 @Article{ compass-scidac08,
17161 url = {http://iopscience.iop.org/1742-6596/125/1/012001}
17164 @Article{ compass-amundson-scidac08,
17174 title = {Two-tiered Component Design and Performance Analysis of {Synergia2} Accelerator
17177 booktitle = {Proceedings of the 2009 Workshop on Component-Based High Performance Computing
17185 author = {Derek Gaston and Chris Newman and Glen Hansen and Damien Lebrun-Grandie},
17190 pages = {1768 -- 1778}
17212 pages = {6 -- 15}
17240 issn = {0021-9991},
17241 pages = {7863--7882},
17251 title = {Efficient parallel implementations of multipole-based {$N$}-body algorithms},
17256 abstract = {We report on an efficient adaptive N-body method which we have recently designed
17266 citeulike-article-id={580952},
17267 keywords = {oct-tree},
17268 pages = {12--21},
17270 title = {A parallel hashed Oct-Tree {N}-body algorithm},
17287 1000-molecule systems},
17290 pages = {12098--12110},
17296 title = {{Simplifying Parallelization of Scientific Codes by a Function-Centric Approach
17298 journal = {ArXiv e-prints},
17302 keywords = {Computer Science - Distributed, Parallel, and Cluster Computing, Computer Science
17303 - Programming Languages},
17312 author = {L. C. McInnes and C. {Woodward (co-organizers)}},
17313 note = {invited minisymposium session at the SIAM Annual Meeting, July 9-10, 2009,
17317 (INL), G. Hansen (INL), J. Cary (Tech-X Corp.), T. Wildey (Univ. of Texas at
17321 @Misc{ mcinnes:fsp-summary:feb2011,
17324 note = {FSP Planning Workshop, General Atomics, Feb 8-11, 2011, see
17328 @Misc{ dvi-materials:siamcse11,
17329 title = {Progress in Large-Scale Differential Variational Inequalities for Heterogeneous
17331 author = {M. Anitescu and A. El-Azab and J. Lee and L. C. McInnes and T. Munson and B. F.
17338 title = {{JFNK} within the semi-implicit scheme in {NIMROD}},
17343 @Misc{ kruger:feb4-2011,
17351 title = {Preconditioning for the steady-state {Navier-Stokes} equations for low
17356 pages = {1299--1316}
17361 title = {A preconditioning for the steady-state {Navier-Stokes} equations},
17365 pages = {237--256}
17375 pages = {1651--1668}
17385 pages = {3--19},
17386 doi = {10.1016/S0168-9274(96)00059-1}
17390 title = {Large-Scale Computation of Pseudospectra Using {ARPACK} and \texttt{eigs}},
17405 @Misc{ visit-web-site,
17418 publisher = {Cornell University-Department of Computer Science and Center for Applied
17430 title = {Isogeometric analysis of the isothermal {N}avier-{S}tokes-{K}orteweg equations},
17434 number = {25-28},
17435 pages = {1828--1840},
17436 issn = {0045-7825},
17442 title = {Isogeometric analysis of the {C}ahn-{H}illiard phase-field model},
17446 number = {49-50},
17447 pages = {4333--4352},
17456 howpublished = {\url{https://fastmath-scidac.llnl.gov}}
17459 @Misc{ exascale-software:proposal,
17467 title = {{Scalable Implicit-Explicit (IMEX) Algorithms and Software for Time-Dependent
17472 @Misc{ intel-mic:website,
17475 note = {\url{http://www.intel.com/technology/architecture-silicon/mic}}
17493 pages = {887-903}
17498 title = {{Scrape-Off Layer Turbulence Theory and Simulations}},
17502 number = {1-2},
17507 title = {Newton's Method for Large Bound-constrained Optimization Problems},
17508 author = {Chih-Jen Lin and Jorge Mor\'{e}},
17512 pages = {1100-1127},
17521 number = {1-2},
17523 issn = {0377-0427},
17524 pages = {281--309},
17525 doi = {10.1016/S0377-0427(00)00516-1},
17538 pages = {1--13}
17542 abstract = {For non-M-matrices, this paper proposes an unstructured multigrid method that
17551 citeulike-article-id={7675372},
17552 citeulike-linkout-0={http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.22.4305},
17555 pages = {197--215},
17556 posted-at = {2010-08-17 23:29:51},
17571 demonstrated in two-level numerical experiments.}},
17573 citeulike-article-id={8598569},
17574 citeulike-linkout-0={http://scitation.aip.org/getabs/servlet/GetabsServlet?prog=normal&id=SJOCE3000023000001000109000001&idtype=cvips&gifs=yes},
17575 citeulike-linkout-1={http://link.aip.org/link/?SCE/23/109},
17579 pages = {109--133},
17580 posted-at = {2011-01-13 18:05:55},
17595 iterative methods,gmres,krylov subspace methods,mos,non-hermitian systems,of
17596 precondition-,preconditioned conju-,subject classi cations,variable
17599 pages = {461--469},
17600 title = {{A flexible inner-outer preconditioned GMRES algorithm}},
17613 title = {Highly Efficient Strong Stability Preserving {Runge-Kutta} Methods with
17614 Low-Storage Implementations},
17618 pages = {2113--2136}
17623 Navier-Stokes equations}},
17627 pages = {257--280},
17632 title = {{A taxonomy and comparison of parallel block multi-level preconditioners for the
17633 incompressible Navier-Stokes equations}},
17639 pages = {1790--1808},
17646 title = {Generalized {G}olub--{K}ahan bidiagonalization and stopping criteria},
17651 pages = {571--592},
17665 title = {{Efficient preconditioning of the linearized Navier-Stokes equations for
17670 number = {1-2},
17671 pages = {261--279},
17672 issn = {0377-0427},
17678 title = {{Preconditioning for the steady-state Navier-Stokes equations with low
17684 pages = {1299--1316},
17685 issn = {1064-8275},
17696 pages = {1651--1668},
17698 publisher = {Philadelphia, PA: SIAM, c1993-}
17707 pages = {129--149},
17708 issn = {0029-599X},
17715 three-dimensional parabolic flows}},
17719 pages = {1787--1806},
17729 pages = {97--111},
17730 issn = {1098-2426},
17736 title = {Finite Element Methods for the Incompressible {N}avier-{S}tokes Equations},
17746 title = {{Block-implicit multigrid solution of Navier-Stokes equations in primitive
17752 pages = {138--158},
17753 issn = {0021-9991},
17764 pages = {345--357},
17780 title = {Parallel scalable adjoint-based adaptive solution of variable-viscosity {Stokes}
17785 number = {21-26},
17786 pages = {1691--1700},
17805 three-dimensional spherical shell using the yin-yang grid},
17809 number = {1-4},
17810 pages = {7--18},
17821 pages = {83-–94},
17832 pages = {2154-–2162},
17837 author = {W.-P. Chen and P. Molnar},
17838 title = {Focal depths of intra-continental and intraplate earthquakes and their
17842 pages = {4183–-4214},
17851 pages = {4–-10},
17857 title = {The long-term strength of continental lithosphere: jelly sandwich or creme
17861 pages = {4–-10},
17876 title = {Communication-optimal parallel and sequential {QR} and {LU} factorizations},
17884 title = {Communication-optimal Iterative Methods},
17894 number = {UMSI2004-8},
17906 pages = {145--210},
17908 url = {http://math-doc.ujf-grenoble.fr/JMPA/PDF/JMPA_1890_4_6_A3_0.pdf}
17924 pages = {149–-154},
17935 chapter = {Parallel {PDE}-Based Simulations Using the {Common Component Architecture}},
17940 pages = {327--381},
17941 doi = {10.1016/S0167-8191(02)00191-6}
17950 pages = {345 - 363},
17952 issn = {0021-9991},
17974 pages = {4--83},
17986 disciplinary communities and executed on leading-edge computer systems. We examine
18009 url = {http://www.cse.nd.edu/Reports/2008/TR-2008-13.pdf}
18023 \url{http://energy.gov/articles/secretary-chu-announces-2011-ernest-orlando-lawrence-award-winners}}},
18033 pages = {1969--1972},
18035 publisher = {Philadelphia, PA: SIAM, c1993-}
18043 pages = {3900 - 3914},
18046 issn = {0021-9991},
18049 keywords = {Navier-Stokes, Boussinesq, Finite element approximation, Time stepping,
18059 pages = {3--60}
18068 pages = {205--228},
18080 pages = {179--196},
18091 pages = {559--579},
18101 pages = {15--26},
18112 pages = {1393--1416},
18115 issn = {1064-8275},
18125 pages = {121--127},
18132 title = {Anasazi software for the numerical solution of large-scale eigenvalue problems},
18138 bibsource = {DBLP, http://dblp.uni-trier.de}
18142 author = {Chao Yang and Weiguo Gao and Zhaojun Bai and Xiaoye S. Li and Lie-Quan Lee and
18144 title = {An Algebraic Substructuring Method for Large-Scale Eigenvalue Calculation},
18149 pages = {873-892},
18151 bibsource = {DBLP, http://dblp.uni-trier.de}
18154 @TechReport{ ml-guide,
18159 number = {SAND2006-2649}
18163 title = {An energy-based AMG coarsening strategy},
18166 number = {2-3},
18171 pages = {133--148}
18180 pages = {713--733},
18183 issn = {1099-1506},
18197 issn = {1064-8275},
18198 pages = {966--991},
18204 keywords = {algebraic multigrid, interpolation, non-Hermitian, nonsymmetric, smoothed
18210 title = {Relaxation-Based Coarsening and Multiscale Graph Organization},
18215 pages = {407-423},
18225 pages = {3468--3490},
18242 number = {2-3},
18243 pages = {141-153},
18250 @Article{ adams-10a,
18253 issn = {0021-9991},
18257 pages = {6208 - 6219},
18274 title = {Spectral element methods for the {Navier-Stokes} equations},
18276 booktitle = {State-of-the-Art Surveys in Computational Mechanics},
18277 pages = {71-–143},
18284 title = {Multi-level {M}onte {C}arlo finite volume methods for nonlinear systems of
18285 conservation laws in multi-dimensions},
18289 pages = {3365--3388},
18291 issn = {0021-9991},
18294 keywords = {Conservation laws, Euler, MHD, Uncertainty quantification, Multi-level Monte
18302 title = {Multi-Level {M}onte {C}arlo Finite Element method for elliptic {PDE}s with
18306 issn = {0029-599X},
18308 pages = {123-161},
18311 doi = {10.1007/s00211-011-0377-0},
18319 pages = {63--84},
18324 @Misc{ snyder-scidac3:proposal,
18332 @Misc{ wirth-scidac3:proposal,
18341 @Misc{ cary-scidac3:proposal,
18350 @Misc{ vashista-scidac3:proposal,
18352 title = {{Design of Damage-Tolerance Material Interfaces for Extreme
18353 Stress-Temperature-Corrosion Environments: Algorithms and Methods for
18354 Multi-Petaflops Simulations}},
18370 @Misc{ elemental-web-page,
18379 title = {A Science-based Case for Large-scale Simulation},
18392 day = {19--21},
18394 pages = {207--216},
18399 @Misc{ valgrind-web-page,
18412 pages = {308--323},
18419 title = {{LAPACK}: A portable linear algebra library for high-performance computers},
18421 number = {CS-90-105},
18436 howpublished = {\url{http://www.many-core.group.cam.ac.uk/ukgpucc2/talks/Elgar.pdf}},
18442 author = {W. Abu-Sufah and D.~J. Kuck and D.~H. Lawrie},
18448 pages = {341--356},
18460 isbn = {978-1-59593-795-7},
18462 pages = {111--122},
18476 pages = {95-114},
18485 howpublished = {\url{http://www.khronos.org/registry/cl/specs/opencl-1.2.pdf}},
18486 url = {http://www.khronos.org/registry/cl/specs/opencl-1.2.pdf},
18501 publisher = {Addison-Wesley},
18502 isbn = {978-0-321-63537-2},
18508 title = {{deal.II} -- a General Purpose Object Oriented Finite Element Library},
18513 pages = {24/1--24/27}
18516 @Misc{ dealii-web-page,
18529 UK, March 22-26, 2010, Revised Lectures},
18530 pages = {175--216},
18531 isbn = {978-3-642-32202-0},
18532 doi = {10.1007/978-3-642-32202-0_4},
18544 mendeley-tags = {clawpack,finite volumes,godunov type methods,high order methods,hyperbolic
18561 mendeley-tags = {clawpack,finite volumes,hyperbolic PDEs,software},
18572 file = {:Users/ketch/Documents/Mendeley Desktop/Nilsen et al/2010 - Simplifying the
18573 parallelization of scientific codes by a function-centric approach in
18577 mendeley-tags = {parallel,programming,python,software},
18580 title = {{Simplifying the parallelization of scientific codes by a function-centric
18582 url = {http://iopscience.iop.org/1749-4699/3/1/015003},
18621 title = {{PyCUDA} and {PyOpenCL}: A scripting-based approach to {GPU} run-time code
18626 pages = {157--174},
18628 issn = {0167-8191},
18644 @Misc{ knepley:icerm-workshop:2012,
18646 title = {Synchronization-reducing and Communication-reducing Algorithms and Programming
18647 Models for Large-scale Simulations},
18649 in Mathematics (ICERM), Jan. 9-13, 2012, Providence, RI,
18650 \url{http://icerm.brown.edu/tw12-1-exascale}},
18658 number = {TR-2004-04},
18660 url = {http://www.cs.uchicago.edu/research/publications/techreports/TR-2004-04},
18661 note = {\url{http://www.cs.uchicago.edu/research/publications/techreports/TR-2004-04}},
18671 number = {TR-2010-09},
18673 url = {http://www.cs.uchicago.edu/research/publications/techreports/TR-2010-09},
18674 note = {\url{http://www.cs.uchicago.edu/research/publications/techreports/TR-2010-09}},
18683 number = {TR-2010-08},
18685 url = {http://www.cs.uchicago.edu/research/publications/techreports/TR-2010-08},
18686 note = {\url{http://www.cs.uchicago.edu/research/publications/techreports/TR-2010-08}},
18693 title = {Exponential grids in high-dimensional space},
18695 number = {TR-2011-07},
18697 url = {http://www.cs.uchicago.edu/research/publications/techreports/TR-2011-07},
18698 note = {\url{http://www.cs.uchicago.edu/research/publications/techreports/TR-2011-07}},
18723 note = {Fall Meeting Supplemental, Abstract IN41A-1350},
18735 pages = {163--169},
18736 publisher = {Springer-Verlag},
18741 author = {Kent-Andre Mardal and Joachim Berdal Haga},
18747 pages = {643--655},
18748 publisher = {Springer-Verlag},
18760 pages = {385--397},
18761 publisher = {Springer-Verlag},
18772 publisher = {Springer-Verlag},
18796 pages = {1045--1049},
18825 pages = {741--758},
18846 title = {Accurate Atom-by-Atom Predictions of Solvation Electrostatics Using a
18847 Hydration-Shell {Poisson}-{Boltzmann} Model},
18851 note = {Fall Meeting Supplemental, Abstract DI14A-08},
18857 title = {Solvation Thermodynamics of Neutral and Charged Solutes Using the Solvation-Layer
18877 pages = {8--13},
18902 pages = {1272--1283},
18904 issn = {0010-4655},
18916 pages = {124107--124117},
18931 pages = {A173--A191},
18937 title = {Computational science and re-discovery: open-source implementations of
18943 doi = {10.1088/1749-4699/5/1/014006},
18950 title = {Analysis of fast boundary-integral approximations for modeling electrostatic
18954 pages = {124--150},
18955 doi = {10.2478/mlbmb-2013-0007},
18956 issn = {2299-3266},
18958 note = {\url{http://www.degruyter.com/view/j/mlbmb.2012.1.issue/mlbmb-2013-0007/mlbmb-2013-0007.xml}},
18965 Boundary-Integral Operators},
18969 pages = {1--22},
18970 doi = {10.1515/mlbmb-2015-0001},
18976 title = {Modeling Charge-Sign Asymmetric Solvation Free Energies With Nonlinear Boundary
18992 pages = {1215--1221},
19000 condition at the solute-solvent interface},
19004 number = {16-17},
19005 pages = {2558--2567},
19010 % http://tex.stackexchange.com/questions/155532/biblatex-and-pubmed-pubmed-central-ids
19013 Mixtures Using a Solvation-Layer Interface Condition},
19028 title = {Extending the Solvation-Layer Interface Condition {(SLIC)} Continum Electrostatic
19029 Model to Linearized {Poisson}-{Boltzmann} Solvent},
19033 pages = {2897--2914},
19043 url = {http://mcclanahoochie.com/blog/wp-content/uploads/2011/01/fft-sc11.pdf},
19054 pages = {C48--C71},
19065 pages = {224--238},
19075 booktitle = {Proceedings of the 14th Annual IEEE Symposium on Field-Programmable Custom
19078 pages = {259--270},
19087 booktitle = {High-Performance Computing and Networking},
19090 pages = {1025--1031},
19097 title = {{Implementation and Performance Analysis of Non-Blocking Collective Operations
19116 isbn = {978-1-60558-708-0},
19118 pages = {159--168},
19141 pages = {563--581}
19145 title = {{S-step} iterative methods for symmetric linear systems},
19152 pages = {153--168}
19156 title = {Parallel Iterative {S-step} Methods for Unsymmetric Linear Systems},
19162 pages = {623--641}
19167 title = {Block {S-step} {Krylov} Iterative Methods},
19171 pages = {3--15},
19184 pages = {441--459}
19196 pages = {243--267}
19200 title = {A hybrid {Chebyshev} {Krylov}-subspace algorithm for solving nonsymmetric systems
19208 pages = {840--855}
19217 pages = {300--319}
19221 title = {{Chebyshev} semi-iterative methods, successive overrelaxation iterative methods,
19222 and second-order {Richardson} iterative methods, parts {I} and {II}},
19229 pages = {147--168}
19241 pages = {789-803}
19251 pages = {369--397},
19257 title = {A space-time multigrid method for parabolic {PDE}s},
19262 pages = {848--864},
19273 pages = {1811--1837},
19275 publisher = {Philadelphia, PA: SIAM, c1993-}
19283 number = {1-2},
19284 pages = {99--116},
19304 pages = {309--333},
19315 pages = {365--382},
19326 pages = {741--760},
19337 pages = {83--96},
19343 title = {Aerodynamic shape optimization using simultaneous pseudo-timestepping},
19348 pages = {46--64},
19360 pages = {147--157},
19366 title = {Multilevel algorithms for ill-posed problems},
19371 pages = {311--334},
19377 title = {On the regularizing properties of a full multigrid method for ill-posed
19388 title = {A multi-grid method with a priori and a posteriori level choice for the
19389 regularization of nonlinear ill-posed problems},
19394 pages = {77--107},
19400 title = {Regularizing {N}ewton-{K}aczmarz Methods for Nonlinear Ill-Posed Problems},
19409 title = {Optimal order multilevel preconditioners for regularized ill-posed problems},
19414 pages = {2001--2038},
19419 title = {Additive and multiplicative multi-grid---a comparison},
19424 pages = {345--364},
19436 pages = {401--426},
19447 pages = {179--201},
19459 pages = {3--96},
19468 pages = {1--69},
19479 pages = {193--215},
19488 number = {2-3},
19489 pages = {205--227},
19495 title = {Multi-Level Approaches to Discrete-State and Stochastic Problems},
19498 Methods, held at Cologne, October 1-4, 1985},
19500 pages = {65--98},
19506 author = {Nathan Halko and Per-Gunnar Martinsson and Joel A. Tropp},
19513 pages = {217-288},
19544 title = {Flexible inner-outer {Krylov} subspace methods},
19547 pages = {2219--2239},
19558 pages = {1651--1674},
19569 pages = {267--319},
19575 title = {Block {K}rylov space methods for linear systems with multiple right-hand sides:
19582 pages = {420-447},
19592 pages = {80--108},
19603 pages = {1--26},
19609 title = {Krylov subspace techniques for reduced-order modeling of large-scale dynamical
19615 pages = {9--44},
19624 pages = {484--489},
19630 title = {Stable reduced models for nonlinear descriptor systems through piecewise-linear
19633 journal = {IEEE Transactions on Computer-Aided Design of Integrated Circuits and Systems},
19636 pages = {1467--1480},
19647 pages = {161--230},
19653 title = {Localized Bases for Finite-Dimensional Homogenization Approximations with
19664 non-separated scales and high contrast},
19669 pages = {677--721},
19685 title = {Phase-Field Simulation of Solidification},
19690 pages = {163--194},
19696 title = {Quantitative phase-field modeling of dendritic growth in two and three
19708 title = {Phase-field models for microstructure evolution},
19713 pages = {113--140},
19719 title = {Non-linear model reduction for uncertainty quantification in large-scale inverse
19725 pages = {1581--1608},
19736 pages = {163--180},
19745 pages = {167--175},
19757 pages = {385--398},
19773 author = {Myers, R.H. and Montgomery, D.C. and Anderson-Cook, C.M.},
19799 title = {Optimal Solvers for {PDE}-Constrained Optimization},
19808 title = {Block-triangular preconditioners for {PDE}-constrained optimization},
19813 pages = {977--996},
19825 pages = {2903--2926},
19831 title = {Flexible {BiCG} and flexible {Bi-CGSTAB} for nonsymmetric linear systems},
19836 pages = {226–-233},
19855 pages = {125--153},
19860 title = {Flexible {BiCG} and flexible {Bi-CGSTAB} for nonsymmetric linear systems},
19865 pages = {226--233},
19876 pages = {454--477},
19881 title = {{FQMR}: A Flexible {Quasi-Minimal Residual} Method with Inexact Preconditioning},
19886 pages = {363--380},
19891 title = {Inexact Preconditioned {Conjugate Gradient} Method with Inner-Outer Iteration},
19896 pages = {1305--1320},
19907 pages = {1035--1062},
19917 pages = {1444--1460},
19923 Variable-Step Preconditioning},
19928 pages = {625--644},
19937 pages = {73--89},
19942 title = {{Bi-CGSTAB} as an induced dimension reduction method},
19946 pages = {1100--1114},
19956 pages = {2687--2709},
19966 pages = {805--825},
19971 title = {Flexible and Multi-Shift Induced Dimension Reduction Algorithms for solving Large
19973 author = {Martin B. van Gijzen and Gerard L.G. Sleijpen and Jens-Peter M. Zemke},
19975 number = {11-06},
19980 title = {A Closed-form Equation for Predicting the Hydraulic Conductivity of Unsaturated
19985 pages = {892--898},
19995 pages = {369--386},
20009 author = {Shang-Hua Teng},
20011 N-Body Simulation},
20016 pages = {635--656},
20018 issn = {1064-8275},
20025 keywords = {N-body simulation, adaptive computing, hierarchical methods, load balancing,
20027 method, tree-codes}
20036 pages = {137--149},
20047 pages = {1444--1460}
20051 title = {Zero-relaxation limit versus operator splitting for two-phase fluid flow
20056 number = {1-2},
20057 pages = {93--124},
20062 title = {Globalization techniques for {N}ewton-{K}rylov methods and applications to the
20063 fully coupled solution of the {N}avier-{S}tokes equations},
20068 pages = {700--721},
20075 Advection--diffusion--reaction systems},
20080 pages = {3508--3516},
20085 title = {Experiments with quasi-{N}ewton methods in solving stiff {ODE} systems},
20090 pages = {297--313},
20102 pages = {11--32}
20119 pages = {1569--1590},
20130 pages = {479--506},
20140 number = {5-6},
20141 pages = {285--296},
20151 publisher = {Springer-Verlag}
20167 pages = {59--74},
20174 title = {A Mesh-Independence Principle for Operator Equations and Their Discretizations},
20178 pages = {160-169},
20185 title = {On measures of ill-conditioning for nonlinear equations},
20189 pages = {104--111},
20199 pages = {383--387},
20270 booktitle = {Proceedings of the April 18-20, 1967, Spring Joint Computer Conference},
20273 pages = {483--485},
20289 issn = {0001-0782},
20290 pages = {532--533},
20305 title = {Multi-language and multi-environment generation of nonlinear finite element
20311 pages = {312--327},
20335 title = {Characterizing Application Sensitivity to OS Interference Using Kernel-level
20340 isbn = {978-1-4244-2835-9},
20342 pages = {19:1--19:12},
20357 pages = {133--181},
20371 issn = {0098-3500},
20372 pages = {14:1--14:28},
20379 keywords = {Adaptive mesh refinement, object-orientation, parallel algorithms, software
20389 pages = {393--422},
20402 author = {Cai, X.-C. and Li, X.},
20408 pages = {746-762},
20414 author = {X.-C. Cai},
20418 pages = {217-224},
20428 pages = {538--559},
20437 number = {ANL/MCS-TM-208},
20445 number = {ANL/MCS-TM-206},
20453 number = {ANL--93/8},
20461 \url{http://en.wikipedia.org/wiki/BSD_licenses#2-clause_license_.28.22Simplified_BSD_License.22_or_.22FreeBSD_License.22.29}}
20470 note = {Available online at \url{http://git-scm.com/book/}}
20495 pages = {129--139},
20501 Hornung and P. Jones and B. Lucas and A. Siegel and T. Ndousse-Fetter},
20502 title = {Software Productivity for Extreme-Scale Science},
20503 note = {Report on DOE Workshop, January 13-14, 2014},
20510 Jones and L. C. McInnes and J. D. Moulton and T. Ndousse-Fetter and D. Post and W.
20512 title = {Extreme-Scale Scientific Application Software Productivity: Harnessing the Full
20513 Capability of Extreme-Scale Computing},
20521 title = {{Interoperable Design of Extreme-Scale Application Software (IDEAS)}},
20522 howpublished = {\url{http://ideas-productivity.org}},
20531 number = {ANL/MCS-TM-330},
20536 @Misc{ sawsfs-web-page,
20539 note = {\url{https://www.youtube.com/watch?v=-w0fPhmZT3c}},
20543 @Misc{ sawshk-web-page,
20550 @Misc{ sawsnestk-web-page,
20568 note = {whitepaper submitted to DOE Workshop on Software Productivity for Extreme-Scale
20574 key = {{Argonne Training Program for Extreme-Scale Computing}},
20575 title = {{Argonne Training Program for Extreme-Scale Computing (ATPESC)}},
20582 title = {An empirical interpolation method: application to efficient reduced-basis
20587 pages = {667--672},
20589 issn = {1631-073X},
20599 pages = {845--854},
20605 title = {Hybrid supercapacitor-battery materials for fast electrochemical charge storage},
20606 author = {A. Vlad and N. Singh and J. Rolland and S. Melinte and P. M. Ajayan and J.-F.
20620 pages = {1--13},
20629 pages = {61--78},
20637 isbn = {978-9339214050},
20649 pages = {20--25},
20652 issn = {0883-7554}
20661 number = {5-6},
20662 pages = {717--738},
20671 pages = {6609--6626},
20678 highly-charged interfaces},
20681 pages = {15575--15585},
20691 pages = {1169--1184},
20697 author = {Zhidong Li and Jianzhong Wu and Zhen-Gang Wang},
20701 pages = {737--746},
20703 url = {http://www.cell.com/biophysj/abstract/S0006-3495(08)70675-1},
20712 pages = {1410--1416},
20722 pages = {2161--2168},
20729 Monte Carlo simulations coupled to the Nernst--Planck equation},
20734 pages = {100--112},
20745 pages = {438--441},
20751 title = {Free-energy model for the inhomogeneous hard-sphere fluid mixture and
20752 density-functional theory of freezing},
20763 title = {Adsorption of Chain Molecules in Slit-Shaped Pores: Development of a SAFT-FMT-DFT
20770 pages = {21337--21350},
20800 number = {459--470},
20801 pages = {307--357},
20820 number = {SAND92-2137},
20829 note = {AIAA Paper 98-3007},
20836 journal = {Computer-Aided Design},
20839 pages = {199--209},
20844 title = {On Analysis Driven Shape Design Using B-Splines},
20868 title = {The engineering sketch pad: A solid-modeling, feature-based, web-enabled system for building parametric geometry},
20876 title = {Gmsh: A 3-D finite element mesh generator with built-in pre-and post-processing
20878 author = {Christophe Geuzaine and Jean-Fran{\c{c}}ois Remacle},
20882 pages = {1309--1331},
20888 title = {{TetGen}, a {Delaunay}-Based Quality Tetrahedral Mesh Generator},
20906 title = {Numerics of Gram-Schmidt orthogonalization},
20910 pages = {297--316},
20918 Science, 1946--1992},
20926 author = {Desmond Fearnley-Sander},
20929 pages = {809--817},
20941 doi = {10.1007/978-3-540-70529-1},
20952 pages = {1173--1181},
20953 isbn = {978-3-540-70529-1},
20954 doi = {10.1007/978-3-540-70529-1_250},
20964 isbn = {978-0486411811},
20974 pages = {4--10},
20980 title = {PRAgMaTIc - Parallel Anisotropic Adaptive Mesh Toolkit},
20982 booktitle = {Facing the Multicore-Challenge III},
20984 editor = {Keller, Rainer and Kramer, David and Weiss, Jan-Philipp},
20987 pages = {143-144},
20988 doi = {10.1007/978-3-642-35893-7_22},
20989 isbn = {978-3-642-35892-0},
21021 pages = {1--12},
21032 pages = {1116--1127},
21040 title = {Balance principles for algorithm-architecture co-design},
21054 pages = {65--76},
21059 @Misc{ roofline-web-page,
21063 url = {http://crd.lbl.gov/departments/computer-science/performance-and-algorithms-research/research/roofline/},
21064 howpublished = {\url{http://crd.lbl.gov/departments/computer-science/performance-and-algorithms-research/research/roofline/}}
21067 @Misc{ roofline-talk2008,
21073 url = {http://crd.lbl.gov/assets/pubs_presos/parlab08-roofline-talk.pdf},
21074 howpublished = {\url{http://crd.lbl.gov/assets/pubs_presos/parlab08-roofline-talk.pdf}}
21083 pages = {33--42},
21103 publisher = {Addison-Wesley},
21129 booktitle = {Real-Time and Embedded Technology and Applications Symposium (RTAS), 2014 IEEE
21131 pages = {25--36},
21137 author = {Haw-ren Fang and Yousef Saad},
21142 pages = {197--221},
21159 pages = {1--8},
21174 title = {Near-rings: the theory and its applications},
21181 title = {{On nonlinear preconditioners in {N}ewton-{K}rylov methods for unsteady flows}},
21186 pages = {565--573},
21189 issn = {1097-0363},
21199 pages = {547--560},
21210 pages = {95--104},
21221 pages = {503--506},
21232 pages = {279--285},
21243 pages = {223--238},
21251 journal = {RAIRO-Analyse num{\'e}rique},
21254 pages = {279--286},
21264 pages = {63--72},
21276 primaryclass = {math-na},
21284 publisher = {Prentice-Hall, Englewood Cliffs, NJ}
21291 pages = {1–-25},
21300 pages = {1414--1416},
21309 pages = {1409--1411},
21318 pages = {974--977},
21324 title = {Riesz-Markov-Kakutani Representation Theorem},
21325 url = {http://en.wikipedia.org/wiki/Riesz-Markov-Kakutani_representation_theorem},
21326 note = {\url{http://en.wikipedia.org/wiki/Riesz-Markov-Kakutani_representation_theorem}},
21335 pages = {165--190},
21340 title = {Concrete representation of abstract {(M)}-spaces. (A characterization of the
21346 pages = {994--1024},
21352 title = {Discontinuous Galerkin methods for plasma physics in the scrape-off layer of
21357 pages = {898--919},
21363 title = {Extreme-scale AMR},
21368 pages = {1--12},
21375 title = {Low-cost parallel algorithms for 2: 1 octree balance},
21379 pages = {426--437},
21387 through inference to prediction for large-scale problems, with application to flow
21392 pages = {348--368},
21404 pages = {C497-C531},
21412 title = {Solution of nonlinear {S}tokes equations discretized by high-order finite
21418 pages = {804--833},
21425 title = {An extreme-scale implicit solver for complex {PDEs}: highly heterogeneous flow in
21444 pages = {231--236},
21455 pages = {121--130},
21456 doi = {10.1016/0885-064X(91)90001-E},
21471 Luporini, Fabio and McRae, Andrew TT and Bercea, Gheorghe-Teodor and Markall,
21489 pages = {224--240},
21496 Gheorghe-Teodor and Ramanujam, J. and Ham, David A. and Kelly, Paul H. J.},
21497 title = {Cross-Loop Optimization of Arithmetic Intensity for Finite Element Local
21505 issn = {1544-3566},
21506 pages = {57:1--57:25},
21518 title = {Finite element assembly strategies on multi- and many-core architectures},
21524 pages = {80--97},
21529 title = {Towards generating optimised finite element solvers for GPUs from high-level
21535 pages = {1815--1823},
21542 title = {Unified embedded parallel finite element computations via software-based
21548 pages = {3323--3351},
21559 pages = {269--293},
21565 title = {Low-Complexity Finite Element Algorithms for the de Rham Complex on Simplices},
21570 pages = {A846--A868},
21581 pages = {631--652},
21591 pages = {1--155},
21611 pages = {C24--C41},
21622 pages = {2099--2119},
21630 author = {Logg, Anders and Mardal, Kent-Andre and Wells, Garth},
21647 title = {Symplectic-mixed finite element approximation of linear acoustic wave equations},
21652 pages = {257--291},
21658 title = {Finite element approximation and preconditioners for a coupled thermo-acoustic
21671 pages = {S368--S385},
21702 pages = {441--459},
21704 doi = {10.1016/0168-9274(95)00079-A}
21713 pages = {343--355},
21730 title = {StgDomain--scalable parallel domain software components for particle-in-cell
21736 pages = {1593--1603},
21749 title = {Numerically Stable Exact Solutions for Variable-Viscosity Stokes Equations},
21761 pages = {250--258},
21772 pages = {453--471},
21777 title = {A nonlinearly preconditioned conjugate gradient algorithm for {rank-R} canonical
21783 pages = {410--432},
21798 non-incremental methods of calculation},
21809 title = {An accelerated fixed-point iteration for solution of variably saturated flow},
21822 pages = {92--101},
21839 booktitle = {Euro-Par 2000 Parallel Processing},
21840 pages = {806--814},
21863 isbn = {978-1-4503-1139-7},
21865 pages = {19:1--19:12},
21882 title = {Textbook multigrid efficiency for the incompressible Navier--Stokes equations:
21888 pages = {853--874},
21899 pages = {465--469},
21905 title = {A {DLM} immersed boundary method based wave-structure interaction solver for high
21915 title = {Simulating water-entry/exit problems using {Eulerian}-{Lagrangian} and
21916 fully-{Eulerian} fictitious domain methods within the open-source {IBAMR}
21926 title = {A minimally-resolved immersed boundary model for reaction-diffusion problems},
21938 electrolocation, and self-propulsion},
21943 pages = {88--108},
21955 pages = {217--296},
21960 title = {A fully resolved active musculo-mechanical model for esophageal transport},
21965 pages = {446--465},
21977 pages = {1--22},
21987 pages = {7517--7521},
21993 fluid--structure interaction with rigid, deforming, and elastic bodies},
21998 pages = {446--476},
22004 title = {Consequences of viscous anisotropy in a deforming, two-phase aggregate. Part 1.
22009 issn = {1469-7645},
22010 pages = {424--455},
22030 pages = {503--538},
22040 pages = {1991--2005},
22051 pages = {1299--1309},
22066 title = {Design of ion-implanted {MOSFET's} with very small physical dimensions},
22069 journal = {IEEE Journal of Solid-State Circuits},
22072 pages = {256--268},
22082 pages = {14:1--14:33},
22112 title = {Numerical calculation of time-dependent viscous incompressible flow of fluid with
22118 pages = {2182--2189},
22129 pages = {108--129},
22131 issn = {1064-8275},
22140 Foufoula-Georgiou and Michael Ghil and Matthew G. Knepley and Randall J. LeVeque
22141 and Lek-Heng Lim and Serge Prudhomme and Adrian Sandu and Frederik J. Simons and
22146 number = {2012-02},
22147 url = {http://cs.uchicago.edu/files/tr_authentic/TR-2012-02.pdf},
22152 title = {Fundamental measure theory for hard-sphere mixtures: a review},
22179 title = {{ASKIT:} An efficient, parallel library for high-dimensional kernel summations},
22189 pages = {664--671},
22200 pages = {869--892},
22208 booktitle = {SIAM Conf. on Data Mining. Workshop on High Performance Analytics-Algorithms,
22214 title = {Reconciling surface plate motions with rapid three-dimensional mantle flow around
22220 pages = {338--341},
22225 title = {The role of rheology and slab shape on rapid mantle flow: Three-dimensional
22235 title = {Slab-driven Mantle Weakening and Rapid Mantle Flow},
22245 olivine-hosted melt inclusions and geochemical modelling with insights from
22251 pages = {913--931},
22261 pages = {4379--4404},
22266 title = {Tectonic drivers of the {Wrangell}-block forearc sliver: Insights from 3D
22277 Lithgow-Bertelloni and Wenbo Xu},
22281 pages = {1169--1185},
22309 pages = {83--105},
22319 pages = {315--318},
22325 author = {Shun-ichiro Karato and Patrick Wu},
22329 pages = {771--778},
22340 pages = {583--606},
22346 title = {Arc-parallel flow in the mantle wedge beneath Costa Rica and Nicaragua},
22353 pages = {1094--1097},
22365 pages = {65--106},
22370 title = {Dynamic data-driven inversion for terascale simulations: Real-time identification
22387 pages = {5622--5634},
22408 pages = {E1679--E1687},
22419 pages = {165--181},
22424 title = {Goal-oriented inference: Approach, linear theory, and application to advection
22430 pages = {A1880--A1904},
22441 pages = {4403--4421},
22446 title = {On the solution of three-dimensional inverse obstacle acoustic scattering
22461 number = {1-4},
22462 pages = {311--320},
22473 pages = {675--700},
22481 journal = {ArXiv e-prints},
22496 pages = {445--459},
22505 number = {1-2},
22506 pages = {99--116},
22516 number = {3-4},
22517 pages = {327--355},
22526 pages = {325--356},
22536 pages = {344--378},
22547 pages = {2002--2007},
22553 triple-junction evolution, and forearc spreading centres—implications for
22559 pages = {269--290},
22570 pages = {3424--3447},
22581 pages = {139--149},
22586 title = {Assimilating lithosphere and slab history in 4-D Earth models},
22590 pages = {8--22},
22603 title = {A data-centric profiler for parallel programs},
22604 author = {Xu Liu and John Mellor-Crummey},
22605 booktitle = {2013 SC-International Conference for High Performance Computing, Networking,
22607 pages = {1--12},
22617 pages = {325--363},
22618 url = {http://www.mathe.tu-freiberg.de/~ernst/PubArchive/helmholtzDurham.pdf},
22628 pages = {608--641},
22638 pages = {5867--5892},
22644 author = {Ali I Nesliturk and M Tezer-Sezgin},
22648 pages = {1201--1224},
22653 title = {Control of Slab Width on Subduction-Induced Upper Mantle Flow and Associated
22663 editor = {Anders Logg and Kent-Andre Mardal and Garth Wells},
22668 pages = {95--119},
22669 isbn = {978-3-642-23099-8},
22670 doi = {10.1007/978-3-642-23099-8_3},
22675 author = {Robert C. Kirby and Kent-Andre Mardal},
22677 editor = {Anders Logg and Kent-Andre Mardal and Garth Wells},
22682 pages = {121--132},
22683 isbn = {978-3-642-23099-8},
22684 doi = {10.1007/978-3-642-23099-8_4},
22698 publisher = {McGraw-hill London},
22709 pages = {4130--4151},
22726 pages = {37--72},
22728 issn = {0080-4622},
22743 pages = {C73--C96},
22749 title = {A hybridizable discontinuous Galerkin method for two-phase flow in heterogeneous
22755 pages = {161--177},
22779 pages = {161--174},
22780 doi = {10.1515/jnma-2019-0027},
22785 title = {A {GPU}-Accelerated Hybridizable Discontinuous {Galerkin} Method for Linear
22791 pages = {513--545},
22792 issn = {1991-7120},
22793 doi = {10.4208/cicp.OA-2018-0235},
22807 title = {Low-order divergence-free approximations for the Stokes problem on Worsey--Farin and Powell--Sabin splits},
22820 pages = {1--21},
22821 issn = {0168-9274},
22834 pages = {513--548},
22851 title = {Accurate Discretization Of Poroelasticity Without {Darcy} Stability --
22852 {Stokes-Biot} Stability Revisited},
22853 author = {Kent-Andre Mardal and Marie E. Rognes and Travis B. Thompson},
22855 pages = {1--36},
22860 title = {Parameter robust preconditioning by congruence for multiple-network
22862 author = {Piersanti, Eleonora and Lee, Jeonghun J and Thompson, Travis and Mardal, K-A and
22867 pages = {B984--B1007},
22878 pages = {2442--2475},
22884 title = {Influence of initial slab dip, inter-plate coupling, and nonlinear rheology on dynamic weakening at the lithosphere-asthenosphere boundary},
22935 publisher = {Addison-Wesley Publishing Co., Inc.}
22938 @TechReport{ epanet-users-manual,
22952 pages = {332--349},
22957 title = {WorkStream--A Design Pattern for Multicore-Enabled Finite Element Computations},
22971 pages = {701--704},
22980 pages = {953--956},
22992 pages = {1019--1022},
22993 note = {English transl. Soviet Math. Dokl. 8, 6 (1967), 1550-1553},
23002 pages = {208--213},
23012 pages = {175--191},
23019 author = {R. Hecht-Nielsen},
23022 pages = {11--14},
23028 title = {Theory of the back-propagation neural network},
23029 author = {R. Hecht-Nielsen},
23032 pages = {593--608},
23043 pages = {465--469},
23051 pages = {474--9},
23070 pages = {106--161},
23072 url = {https://www.cambridge.org/core/books/foundations-of-computational-mathematics-santander-2005/sparse-grids-for-higher-dimensional-problems/C6E91FFE07DF5F6C069B80805B216B50},
23082 pages = {653--675},
23090 author = {Pierre-Emmanuel Leni and Yohan D Fougerolle and Fr{\'{e}}d{\'{e}}ric Truchetet},
23091 booktitle = {Electronic Imaging-Wavelet Applications in Industrial Processing VI, Proceedings
23093 pages = {724804--724804},
23100 title = {Tensor-train decomposition},
23105 pages = {2295--2317},
23122 pages = {436--444},
23134 title = {A measure-theoretic interpretation of sample based numerical integration with
23140 pages = {A2072--A2098},
23150 pages = {283--295},
23155 title = {On orienting edges of unstructured two-and three-dimensional meshes},
23184 solution of the incompressible Navier-Stokes equations},
23189 pages = {453--473},
23194 title = {Block-implicit multigrid calculation of two-dimensional recirculating flows},
23199 pages = {29--48},
23209 pages = {56--91},
23215 author = {Ray D. Zimmerman and Carlos E. Murillo-S{\'a}nchez and Robert J. Thomas},
23216 title = {{MATPOWER}: Steady-state operations, planning and analysis tools for power
23221 pages = {12--19},
23244 pages = {4--19},
23255 pages = {11--15}
23258 @Misc{ simulink-web-page,
23265 @Misc{ labview-web-page,
23273 @Misc{ modelica-web-page,
23285 title = {{10M-Core} Scalable Fully-Implicit Solver for Nonhydrostatic Atmospheric
23296 title = {An Extreme-Scale Implicit Solver for Complex {PDEs}: Highly Heterogeneous Flow in
23302 @Misc{ improving-software-whitepaper2017,
23314 howpublished = {\url{https://science.energy.gov/news/doe-science-at-40}},
23324 @Misc{ r-and-d100:awards2009,
23327 howpublished = {\url{https://www.rdmag.com/2009/08/2009-r-d-100-award-winners}}
23331 title = {{xSDK: Extreme-scale Scientific Software Development Kit}},
23332 key = {xSDK: Extreme-scale Scientific Software Development Kit},
23336 @Misc{ xsdk-community-installation-policies2017,
23344 @Misc{ xsdk-community-package-policies2017,
23352 @Misc{ ideas-what-are-interoperable-libraries,
23357 \url{https://ideas-productivity.org/resources/howtos/}},
23361 @Misc{ ideas-productivity:website,
23364 howpublished = {\url{https://ideas-productivity.org}}
23374 @Misc{ siam-cse-jan2018,
23389 @Misc{ doe-appliedmathpimeeting2017,
23391 Miranda Holmes-Cerfon and Barney Maccabe and Esmong Ng and Pieter Swart and Karen
23394 note = {\url{http://www.orau.gov/ascr-appliedmath-pi2017}},
23398 @Misc{ doe-fusionintegratedsimulationsworkshopreport2015,
23403 \url{http://science.energy.gov/~/media/fes/pdf/workshop-reports/2016/ISFusionWorkshopReport_11-12-2015.pdf}},
23407 @Misc{ sisc-specialissueintro,
23417 @Article{ xsdk-foundations2017,
23418 title = {{xSDK} Foundations: Toward an Extreme-scale Scientific Software Development Kit},
23421 Osei-Kuffuor and J. Sarich and B. Smith and J. Willenbring and U.M. Yang},
23443 title = {{{deal.II}: An open-source finite element library}},
23456 @Misc{ fission-gas-scidac:website,
23463 @Misc{ tokamak-disruption-scidac:project,
23474 pages = {214--223},
23477 pdf = {https://jedbrown.org/files/DuplyakinBrownCalhoun-ActiveLearningCostMemoryAware-2018.pdf}
23486 url = {http://www.flux.utah.edu/paper/duplyakin-cluster16},
23487 pdf = {https://jedbrown.org/files/DuplyakinBrownRicci-ActiveLearningPerformanceAnalysis-2016.pdf}
23493 howpublished = {\url{https://epsi.pppl.gov/computing/xgc-1}},
23497 @Misc{ wdmapp-bhattacharjee-ecp:website,
23498 title = {{WDMApp: High-Fidelity Whole Device Modeling of Magnetically Confined Fusion
23502 howpublished = {\url{https://www.exascaleproject.org/activity/energy-applications}},
23506 @Misc{ subsurface-steefel-ecp:website,
23511 howpublished = {\url{https://www.exascaleproject.org/activity/earth-space-science-applications}},
23515 @Article{ chombo-crunch:2014,
23516 title = {High-Resolution Simulation of Pore-Scale Reactive Transport Processes Associated
23523 pages = {22--31},
23533 pages = {215--234},
23539 title = {On solving large-scale limited-memory quasi-Newton equations},
23543 pages = {196--225},
23552 pages = {301--315},
23589 pages = {2583--2603},
23599 pages = {612--632},
23604 title = {Large displacement body-fitted {FSI} simulations using a mesh-connectivity-change
23613 title = {Metric-based anisotropic mesh adaptation for three-dimensional time-dependent
23622 title = {Time-accurate anisotropic mesh adaptation for three-dimensional time-dependent
23623 problems with body-fitted moving geometries},
23627 pages = {157--187},
23637 pages = {154--166},
23666 number = {1-4},
23667 pages = {93--112},
23668 url = {http://www.m-hikari.com/atam/atam2009/atam1-4-2009/principeATAM1-4-2009.pdf},
23701 url = {https://global.oup.com/academic/product/finite-elements-and-fast-iterative-solvers-9780199678792?cc=us&lang=en&},
23712 pages = {52--80},
23721 doi = {10.1016/S0168-9274(99)00022-7},
23725 pages = {195--218},
23746 pages = {97--119},
23752 author = {Jinbiao Wu and Young-Ju Lee and Jinchao Xu and Ludmil Zikatanov},
23754 pages = {797--815},
23759 title = {Duality-based adaptivity in finite element discretization of heterogeneous
23765 pages = {167--187},
23770 title = {A duality-based optimization approach for model adaptivity in heterogeneous
23776 pages = {412--428},
23781 title = {On the Wiener--Hopf method for surface plasmons: Diffraction from semiinfinite
23787 pages = {599--625},
23797 pages = {126--145},
23802 title = {Generation of surface plasmon-polaritons by edge effects},
23807 pages = {77--95},
23813 title = {Universal behavior of a dispersive Dirac cone in gradient-index plasmonic
23825 title = {Homogenization of plasmonic crystals: seeking the epsilon-near-zero effect},
23836 title = {Finite-size effects in wave transmission through plasmonic crystals: A tale of
23847 title = {Nonretarded edge plasmon-polaritons in anisotropic two-dimensional materials},
23858 title = {Homogenization of time-harmonic Maxwell’s equations in nonhomogeneous plasmonic
23869 invariant-domain preserving second-order finite-element scheme},
23874 pages = {1--30},
23879 title = {Second-order invariant domain preserving approximation of the compressible
23880 Navier--Stokes equations},
23881 author = {Guermond, Jean-Luc and Maier, Matthias and Popov, Bojan and Tomas, Ignacio},
23899 gradient-index graphene waveguides},
23913 pages = {20--34},
23959 email = {pablo-carrica@uiowa.edu and robert-wilson@uiowa.edu}
23962 % ------------------- TAO References ----------------------
23971 pages = {361--376}
23974 @TechReport{ tao-user-ref-2000,
23979 number = {ANL/MCS-TM-242},
23983 % ------------------- Optimization References ----------------------
23999 pages = {88--111}
24008 pages = {626--637},
24014 title = {The {MINPACK-2} Test Problem Collection},
24017 number = {ANL/MCS-TM-150},
24018 key = {more91 ! MINPACK-2}
24024 institution = {Konrad-Zuse-Zentrum fur Informationstechnik Berlin},
24026 number = {SC-94-4},
24032 title = {{OPT}++: An Object-Oriented Class Library for Nonlinear Optimization},
24035 number = {SAND94-8225},
24042 publisher = {Prentice-Hall, Inc.},
24052 number = {MCS-P330-1092}
24055 @Article{ more-toraldo,
24058 pages = {93--113},
24070 pages = {1190--1208},
24074 issn = {1064-8275 (print), 1095-7197 (electronic)},
24082 author = {C.-J. Lin and J. J. Mor\'e},
24083 title = {Newton's method for large bound-constrained optimization problems},
24087 pages = {1100--1127},
24096 number = {ANL/MCS-P861-1200},
24104 title = {Scalable training of L1-regularized log-linear models},
24106 pages = {33--40},
24116 pages = {311--365}
24119 % ------------------- Component Software References ----------------------
24123 title = {Toward a Common Component Architecture for High-Performance Scientific
24126 pages = {115--124},
24128 note = {See \url{http://cca-forum.org}}
24133 title = {Component Software: Beyond Object-Oriented Programming},
24144 journal = {Software -- Concepts and Tools},
24145 publisher = {Springer-Verlag},
24148 pages = {49--56}
24156 pages = {46--56},
24161 @Misc{ cca-web-page,
24163 note = {See \url{http://cca-forum.org}}
24166 % --------------- References for Tools Used by TAO Developers -----------------
24169 % tohtml: Used to generate on-line TAO users manual and manual pages
24175 number = {ANL/MCS-TM-00},
24188 number = {ANL/MCS-TM-00},
24194 % ------------------------- PETSc References ------------------------------
24202 pages = {163--202},
24206 % ------------------------- Misc Other References ------------------------------
24207 @Misc{ indeps-web-page,
24223 @Misc{ isis++-web-page,
24230 @Misc{ trilinos-web-page,
24238 @Misc{ alice-web-page,
24240 note = {http://www.mcs.anl.gov/\-alice, Mathematics and Computer Science Division,
24245 @Misc{ autodiff-webpage,
24250 @Misc{ coool-home-page,
24252 title = {{The CWP Object-Oriented Optimization Library}},
24256 @Misc{ rice-inversion-home-page,
24262 @Misc{ opt++-home-page,
24263 author = {{OPT++: An Object-Oriented Nonlinear Optimization Library}},
24275 pages = {191-212},
24276 abstract = {The object-oriented programming paradigm can be used to overcome the
24277 incompatibilities between off-the-shelf optimization software and application
24283 reputation C++ has for runtime performance, the use of mixed-language programming
24287 url = {http://www.acm.org/pubs/citations/journals/toms/1999-25-2/p191-gockenbach/}
24290 @Misc{ neos-guide,
24303 pages = {1-122},
24344 title = {Connection Machine {CM}--5 Technical Summary},
24369 howpublished = {www.cs.wisc.edu/math-prog/fatcop}
24375 howpublished = {www-unix.mcs.anl.gov/metaneos}
24382 pages = {167--182},
24394 pages = {68--75}
24405 @Manual{ :pro-matlab,
24406 title = {{PRO}--{MATLAB} User's Guide},
24415 howpublished = {pp. 72--75},
24422 howpublished = {http://www-fp.mcs.anl.gov/otc/Guide/CaseStudies/slp/index.html}
24433 @TechReport{ aarts.laarhoven.ea:local-search-based,
24435 title = {Local-Search-Based Algorithms for Job Shop Scheduling},
24438 address = {Nederlandse Philips Bedrijven B.V., P.O. Box 218, NL-5600 MD Eindhoven},
24440 type = {CQM-Not}
24449 pages = {213--226}
24458 pages = {388--394}
24463 title = {Optimal Flow--Shop Scheduling with Earliness and Tardiness Penalties},
24467 pages = {117--138}
24484 pages = {297--336}
24493 number = {92-02},
24504 pages = {223--231}
24514 number = {78-10},
24521 publisher = {McGraw--Hill Book Company},
24529 author = {B--H. Ahn},
24530 title = {Solution of Non--Symmetric Linear Complementarity Problems by Iterative Methods},
24534 pages = {175--185}
24537 @Article{ al-fahed.stavroulakis.ea:hard,
24538 author = {A. M. Al-Fahed and G. E. Stavroulakis and P. D. Panagiotopoulos},
24543 pages = {257--265}
24546 @Article{ al-fahed.stavroulakis.ea:linear,
24547 author = {A. M. Al-Fahed and G. E. Stavroulakis and P. D. Panagiotopoulos},
24552 pages = {112--122}
24555 @Article{ al-khayyal.falk:jointly,
24556 author = {F. A. Al--Khayyal and J. E. Falk},
24561 pages = {273--286}
24564 @Article{ al-khayyal.kyparisis:finite,
24565 author = {F. A. Al--Khayyal and J. Kyparisis},
24571 pages = {319--332}
24574 @PhDThesis{ al-khayyal:biconvex,
24575 author = {F. A. Al--Khayyal},
24588 pages = {353--375}
24592 author = {J.~C. Alexander and R.~B. Kellog and T.-Y. Li and J~.A. Yorke},
24599 author = {J.~C. Alexander and T.-Y. Li and J~.A. Yorke},
24602 pages = {1--14},
24605 editor = {B.~C. Eaves and F.~J. Gould and H.-O. Peitgen and M.~J. Todd},
24613 pages = {37--68},
24632 publisher = {Springer-Verlag},
24637 @InProceedings{ allgower.georg:predictor-corrector,
24640 title = {Predictor--Corrector and Simplicial Methods for Approximating Fixed Points and
24642 pages = {15--56}
24645 @Article{ aluffi-pentini.parisi.ea:algorithm,
24646 author = {F. Aluffi-Pentini and V. Parisi and F. Zirilli},
24647 title = {Algorithm 667: {SIGMA}- {A} Stochastic-Integration Global Minimization
24652 pages = {366--380}
24661 pages = {1--11}
24672 pages = {1170--1173}
24681 pages = {221--245}
24689 pages = {1--11}
24708 url = {ftp://ftp.cs.wisc.edu/math-prog/tech-reports/96-11.ps},
24716 Waterloo, Ontario, Canada, May 28--30},
24728 url = {ftp: //ftp.cs.wisc.edu/math-prog/tech-reports/93-ga.ps},
24730 pages = {161--173},
24738 Computing, Chicago, Illinois, December 11-13},
24745 title = {A New Primal Algorithm for Semi-Infinite Linear Programming},
24751 title = {Linear Programming in Infinite--Dimensional Spaces},
24759 title = {A New Primal Algorithm for Semi-Infinite Linear Programming},
24764 publisher = {Springer-Verlag},
24774 pages = {1946--1961}
24783 pages = {513--530}
24786 @TechReport{ anitescu.lesaja.ea:infeasible-interior-point,
24788 title = {An infeasible--interior--point predictor--corrector algorithm for the
24789 {P}$_x$--geometric {LCP}},
24799 title = {Formulating Dynamic Multi-Rigid-Body Contact Problems with Friction as Solvable
24810 title = {Crashing a Maximum-Weight Complementarity Basis},
24814 pages = {281--294}
24819 title = {A combined phase {I}--phase {II} scaled potential algorithm for linear
24824 pages = {429--440}
24829 title = {A combined phase {I}--phase {II} projective algorithm for linear programming},
24833 pages = {209--223}
24839 booktitle = {High-Performance Computation and Networks},
24840 publisher = {Springer-Verlag},
24844 pages = {662--667}
24859 title = {Computing a Search Direction for Large-Scale Linearly-Constrained Nonlinear
24868 title = {Minimization of Functions having {L}ipschitz-continuous First Partial
24873 pages = {1--3}
24882 pages = {265--290}
24893 pages = {166--176}
24897 author = {J.-P. Aubin and I. Ekeland},
24910 pages = {863--874}
24932 author = {A. A. Auslender and J.--P. Crouzeix},
24937 pages = {243--253}
24940 @Article{ auslender.haddou:interior-proximal,
24942 title = {An interior-proximal method for convex linearly constrained problems and its
24946 pages = {77--100},
24957 pages = {161--172}
24968 @TechReport{ averick.carter.ea:minpack-2,
24969 author = {B. M. Averick and R. G. Carter and J. J. Mor\'e and G. -L. Xue},
24970 title = {The {MINPACK-2} Test Problem Collection},
24974 number = {MCS-P153-0692}
24984 number = {SAND88-2955}
24993 pages = {237--270}
25011 pages = {203--208}
25020 pages = {264--274}
25027 pages = {14--21}
25032 title = {An Algorithm for Large Zero--One Knapsack Problems},
25036 pages = {1132--1154}
25049 title = {Dose Computation for a One-Dimensional Multileaf Collimator},
25056 pages = {323--326}
25064 pages = {23--34},
25074 pages = {292--352}
25089 title = {An Algorithm for Solving the General Bi--Level Programming Problem},
25093 pages = {260--272}
25098 title = {Convex Two-Level Optimization},
25102 pages = {15--27}
25113 pages = {116--128}
25122 pages = {174--182}
25131 pages = {266--268}
25141 pages = {954--973}
25144 @Article{ battiti:first-,
25146 title = {First- and Second-Order Methods for Learning: Between Steepest Descent and
25151 pages = {141--166}
25160 pages = {226--244}
25171 pages = {81--90}
25204 pages = {103--107}
25215 pages = {29--37}
25218 @Book{ ben-israel.ben-tal.ea:optimality,
25219 author = {A. Ben--Israel and A. Ben--Tal and S. Zlobec},
25226 @Article{ ben-israel:newton-raphson,
25227 author = {A. Ben--Israel},
25228 title = {A {N}ewton--{R}aphson Method for the Solution of Systems of Equations},
25232 pages = {243--252}
25235 @Article{ ben-tal.melman.ea:curved,
25236 author = {A. Ben--Tal and A. Melman and J. Zowe},
25241 pages = {669--695},
25250 pages = {400--407},
25251 url = {ftp: //ftp.cs.wisc.edu/tech-reports/reports/1991/tr1004.ps},
25257 title = {Bilinear Separation of Two Sets in n-Space},
25261 pages = {207--227}
25270 pages = {27--39}
25281 pages = {56--67}
25290 pages = {23--34}
25299 pages = {722--734}
25309 optnumber = {98-100},
25324 pages = {97--101}
25327 @Book{ berge.ghouila-houri:programming,
25328 author = {C. Berge and A. Ghouila-Houri},
25358 pages = {74--85}
25368 pages = {139--159}
25377 pages = {1219--1243}
25393 pages = {580--595}
25399 publisher = {Prentice-Hall, Inc},
25427 pages = {221--252}
25430 @Article{ bertsekas:goldstein-levitin-poljak,
25432 title = {On the {G}oldstein-{L}evitin-{P}oljak Gradient Projection Algorithm},
25435 volume = {AC-21},
25436 pages = {174--184}
25445 pages = {133--145}
25454 pages = {87--99}
25471 pages = {221--246}
25479 pages = {3--25},
25481 url = {ftp: //ftp.cs.wisc.edu/math-prog/tech-reports/95-16.ps},
25487 title = {Convergence of an Infeasible Interior--Point Algorithm from Arbitrary Positive
25492 pages = {316--325},
25493 url = {ftp: //ftp.cs.wisc.edu/tech-reports/reports/1993/tr1180.ps},
25499 title = {Convergence of Infeasible Interior--Point Algorithms from Arbitrary Starting
25513 pages = {533--562},
25515 url = {ftp: //ftp.cs.wisc.edu/math-prog/tech-reports/95-09.ps},
25524 pages = {219--236},
25526 url = {ftp://ftp.cs.wisc.edu/math-prog/tech-reports/94-15.ps},
25531 number = {94--15}
25536 title = {User's manual for {CONTAIN--HWR/0}, Rev. 1: {A} Computer Code for the Analysis of
25542 number = {SAND91--1482}
25557 school = {University of Wisconsin--Madison},
25581 title = {Improving the Robustness of Descent-Based Methods for Semi-Smooth Equations Using
25586 pages = {153--176}
25603 number = {ANL/MCS--TM--192},
25609 title = {{AIMMS} -- The Modeling System},
25622 pages = {1--29}
25634 title = {Sequential quadratic programming for non-linear elastic contact problems},
25640 pages = {301--308}
25648 pages = {231--246},
25658 pages = {1553--1566},
25668 pages = {103--107}
25678 pages = {229--235}
25691 title = {Training a 3-Node Neural Network is {NP}-Complete},
25697 pages = {494--501}
25715 pages = {59--80}
25720 title = {The Convergence of the {B}en--{I}srael Iteration for Nonlinear Least Squares
25725 pages = {512--522}
25729 author = {G. Bolzon and G. Cochetti and G. Maier and F. Tin-Loi},
25738 author = {G. Bolzon and G. Maier and F. Tin-Loi},
25739 title = {Holonomic and nonholonomic simulations of quasi-brittle fracture: a comparative
25747 pages = {885--898}
25751 author = {G. Bolzon and G. Maier and F. Tin-Loi},
25758 author = {G. Bolzon and G. Maier and F. Tin-Loi},
25759 title = {On the Multiplicity of Solutions in Quasi-Brittle Fracture Computations},
25763 pages = {511--516}
25772 pages = {123--160}
25779 pages = {280--285},
25783 @Article{ bortfeld.kahler.ea:x-ray,
25785 title = {{X}-ray field compensation with multileaf collimators},
25790 pages = {723--730}
25801 pages = {291--304}
25810 pages = {9--52}
25820 pages = {146--155}
25829 pages = {37--44}
25838 pages = {217--238}
25847 number = {96-03},
25857 number = {95-21},
25867 pages = {1-10}
25884 pages = {258--268}
25893 pages = {373--375}
25902 pages = {129--140}
25909 publisher = {Springer-Verlag},
25913 pages = {209--246}
25933 pages = {54--83}
25942 pages = {111--126}
25952 pages = {200--217}
25966 publisher = {Prentice-Hall, Inc},
25978 pages = {1081--1089}
25982 author = {H. Br\'{e}zis and P.--L. Lions},
25987 pages = {329--345}
25992 title = {Op\'{e}rateurs Maximaux Monotones et Semi-Groupes de Contractions dans les
25994 publisher = {North-Holland},
26013 pages = {1--28}
26023 pages = {890--892}
26032 pages = {639--655}
26039 journal = {Set-Valued Analysis, forthcoming}
26059 pages = {197--216}
26069 pages = {376--379}
26078 pages = {121-167},
26088 pages = {199--213},
26107 pages = {57--60},
26111 @Article{ burke.ferris:gauss-newton,
26113 title = {A {G}auss--{N}ewton Method for Convex Composite Optimization},
26117 pages = {179--194},
26118 url = {ftp: //ftp.cs.wisc.edu/tech-reports/reports/1993/tr1176.ps},
26128 pages = {1340--1359},
26129 url = {ftp: //ftp.cs.wisc.edu/tech-reports/reports/1991/tr1050a.ps},
26140 pages = {305--336}
26149 pages = {573--595}
26158 pages = {1197--1211}
26163 title = {Optimality Conditions for Non Finite--Valued Convex Composite Functions},
26167 pages = {103--120}
26176 pages = {265--282}
26181 title = {The Global Linear Convergence of a Non-Interior Path-Following Algorithm for
26186 pages = {719--735}
26196 number = {ANL/MCS--TM--54},
26206 pages = {260--279}
26215 pages = {968--998}
26224 pages = {1081--1102}
26233 pages = {325--347}
26242 pages = {287--302}
26252 pages = {319--351}
26261 optpages = {123-135}
26280 pages = {291--299}
26289 pages = {93--116}
26298 pages = {81--90},
26308 pages = {269--283},
26309 url = {ftp: //ftp.cs.wisc.edu/tech-reports/reports/1992/tr1101.ps},
26315 title = {Lineality Removal for Copositive--Plus Normal Maps},
26318 pages = {1--10},
26320 url = {ftp: //ftp.cs.wisc.edu/math-prog/tech-reports/94-02.ps},
26330 pages = {299--312},
26331 url = {ftp: //ftp.cs.wisc.edu/math-prog/tech-reports/94-01.ps},
26341 pages = {44--64},
26342 url = {ftp: //ftp.cs.wisc.edu/tech-reports/reports/1992/tr1114.ps},
26360 pages = {37-45},
26367 title = {Initial clinical experience with the Peacock intensity modulation of a 3-{D}
26372 pages = {30--34}
26383 pages = {240--248}
26393 pages = {169--184}
26419 number = {85-105},
26423 @TechReport{ censor.iusem.ea:interior-point,
26425 title = {An Interior-Point Method with {B}regman Functions for the Variational Inequality
26434 title = {An Iterative Row-Action Method for Interval Convex Programming},
26438 pages = {275--291}
26452 @Article{ censor.segman:block-iterative,
26454 title = {On Block-Iterative Entropy Maximization},
26458 pages = {275--291}
26463 title = {The Proximal Minimization Algorithm with ${D}$-functions},
26467 pages = {451--464}
26472 title = {Parallel Application of Block-Iterative Methods in Medical Imaging and Radiation
26477 pages = {307--325}
26480 @Article{ censor:row-action,
26482 title = {Row-action Methods for Huge and Sparse Systems and their Applications},
26486 pages = {444--466}
26505 pages = {1--17}
26510 title = {The Generalized Quasi-Variational Inequality Problem},
26513 pages = {211--222},
26519 title = {Nonlinear Least p--th Optimization and Nonlinear Programming},
26523 pages = {195--225}
26531 pages = {783--786}
26560 pages = {67--74}
26565 title = {A Penalized {F}ischer-{B}urmeister {NCP}-Function: Theoretical Investigation and
26576 title = {A Global and Local Superlinear Continuation-Smoothing Method for ${P}_0$ +
26581 pages = {624--645}
26590 url = {ftp://ftp.cs.wisc.edu/pub/dmi/tech-reports/99-11.ps},
26595 number = {99-11}
26600 title = {{FATCOP}: {A} Fault Tolerant {C}ondor-{PVM} Mixed Integer Program Solver},
26605 url = {ftp: //ftp.cs.wisc.edu/math-prog/tech-reports/99-05.ps},
26606 number = {99-05},
26618 pages = {193--209}
26621 @TechReport{ chen.florian:o-d,
26623 title = {{O}-{D} demand adjustment problem with congestion: Part {I}. Model analysis and
26626 number = {CRT-94-56},
26637 pages = {237--253},
26641 @Article{ chen.harker:non-interior,
26643 title = {A Non-Interior-Point Continuation Method for Linear Complementarity Problems},
26647 pages = {1168--1190}
26656 pages = {403--420}
26665 pages = {97--138}
26674 pages = {51--70}
26684 pages = {445--462}
26694 pages = {519--540}
26699 title = {A Convergence Analysis of Proximal-Like Minimization Algorithms Using {B}regman
26704 pages = {538--543}
26707 @Article{ chen.ye:homotopy-smoothing,
26709 title = {On Homotopy-Smoothing Methods for Variational Inequalities},
26713 pages = {589--616}
26716 @PhDThesis{ chen:forward-backward,
26717 author = {G. H.--G. Chen},
26718 title = {Forward--Backward Splitting Techniques: Theory and Applications},
26729 note = {Available from ftp://ftp.cs.wisc.edu/math-prog/tech-reports/},
26730 annote = {Mathematical Programming Technical Report 95-12}
26737 publisher = {McGraw--Hill},
26747 pages = {3145--3148}
26758 pages = {435--443}
26767 pages = {175--199}
26770 @Article{ chow.mallet-parret.ea:finding,
26771 author = {S. N. Chow and J. Mallet--Parret and J. A. Yorke},
26777 pages = {887--899}
26786 pages = {126--135}
26795 number = {91-6}
26798 @Article{ chung:np-completeness,
26799 author = {S.--J. Chung},
26800 title = {{NP}-Completeness of the Linear Complementarity Problem},
26804 pages = {393--399}
26819 publisher = {North-Holland},
26829 pages = {475--585}
26844 pages = {160--169}
26862 pages = {123--136}
26871 pages = {137--161}
26879 number = {TR 93-1388},
26890 pages = {187--209}
26905 number = {320--2949},
26912 Finite-Step Problem in Elastoplasticity with Mixed Nonlinear Hardening},
26916 pages = {563--585}
26921 title = {Implementing a Computable General Equilibrium Model on {GAMS} -- The {C}ameroon
26930 title = {{LANCELOT}: {A} {F}ortran package for Large--Scale Nonlinear Optimization
26941 title = {Numerical Experiments with the {LANCELOT} Package (Release {A}) for Large-Scale
26946 pages = {73--110}
26951 title = {Trust-Region Methods},
26974 pages = {387--392}
26983 pages = {251--264}
26992 pages = {2--22}
26997 title = {A gradient method of optimizing external-beam radiotherapy treatment plans},
27001 pages = {235--243}
27006 title = {A problem in roatation therapy with x-rays},
27010 pages = {623--630}
27015 title = {A problem in roatation therapy with x-rays2: dose distributions with an axis of
27020 pages = {1921--1925}
27029 pages = {103--125}
27038 pages = {79--90}
27042 author = {R. W. Cottle and F. Giannessi and J.--L. Lions},
27052 pages = {361--390},
27063 pages = {347--363}
27080 pages = {231--249}
27097 pages = {147--158}
27108 pages = {144--162}
27125 pages = {1--23}
27128 @Book{ cristianini.shawe-taylor:introduction,
27129 author = {N. Cristianini and J. Shawe-Taylor},
27142 pages = {179--193}
27147 title = {Solving Large Scale Zero-One Linear Programming Problems},
27151 pages = {803--834}
27161 pages = {76--89}
27171 pages = {435--553}
27180 pages = {385--392}
27189 pages = {385--392}
27192 @Manual{ culler:split-c,
27194 title = {The Split--{C} Programming Language},
27206 pages = {598--605}
27219 @TechReport{ czyzyk.mesnier.ea:network-enabled,
27223 number = {MCS-P615-0996},
27224 title = {The {N}etwork-{E}nabled {O}ptimization {S}erver},
27234 pages = {148--163},
27245 pages = {151--165}
27253 pages = {635--644}
27260 publisher = {Prentice-Hall, Inc},
27266 title = {The Theory of Min--Max, with Applications},
27270 pages = {641--664}
27275 title = {The Theory of Min--Max},
27277 publisher = {Springer-Verlag},
27283 title = {Positive (semi-)definite programming},
27285 publisher = {North-Holland},
27289 pages = {55--73}
27299 pages = {312--323}
27308 pages = {101--111}
27319 @Manual{ dash:xpress-mp,
27320 title = {{XPRESS-MP} User Guide},
27335 title = {Users' guide for the unsymmetric-pattern multifrontal Package ({UMFPACK})},
27357 pages = {72--80}
27368 optpages = {1157-1161}
27377 pages = {705--727}
27381 author = {J.--C. {De~Bremaecker} and M. C. Ferris and D. Ralph},
27388 pages = {287--303}
27392 author = {J.--C. {De~Bremaecker} and M. C. Ferris},
27396 url = {ftp://ftp.cs.wisc.edu/math-prog/tech-reports/00-01.ps},
27399 pages = {601--605},
27402 number = {00-01}
27412 pages = {307--329}
27418 publisher = {Springer-Verlag},
27430 @Article{ deleone.mangasarian.ea:multi-sweep,
27431 author = {R. {De~Leone} and O. L. Mangasarian and T.-H. Shiau},
27432 title = {Multi-Sweep Asynchronous Parallel Successive Overelaxation for the Nonsymmetric
27437 pages = {43--54}
27445 publisher = {Springer-Verlag},
27450 pages = {103--124},
27456 title = {Combining Equation-Based Methods for the Solution of Large-Scale Nonlinear
27478 pages = {407--439},
27496 pages = {479--497}
27501 title = {Truncated {N}ewton Method Algorithms for Large--Scale Unconstrained
27506 pages = {190--212}
27511 title = {The Performance of {NLPNET}, {A} Large--Scale Nonlinear Network Optimizer},
27515 pages = {245--248}
27525 pages = {415--426}
27542 pages = {448--474}
27560 pages = {421--440}
27577 pages = {103--111}
27586 pages = {277--285}
27605 number = {EWD--123},
27615 pages = {674--675}
27624 publisher = {Springer-Verlag},
27635 pages = {495--519}
27644 pages = {618--628}
27654 pages = {72--84}
27664 pages = {1--18}
27673 number = {94-07},
27675 url = {ftp: //ftp.cs.wisc.edu/math-prog/tech-reports/94-07.ps},
27682 title = {Crash Techniques for Large-Scale Complementarity Problems},
27683 pages = {40--61},
27684 url = {ftp: //ftp.cs.wisc.edu/math-prog/tech-reports/95-22.ps},
27692 pages = {319--345},
27695 url = {ftp: //ftp.cs.wisc.edu/tech-reports/reports/1994/tr1215.ps},
27703 pages = {127--148},
27707 url = {ftp: //ftp.cs.wisc.edu/math-prog/tech-reports/97-09.ps},
27713 title = {The {PATH} Solver: {A} Non-Monotone Stabilization Scheme for Mixed
27716 pages = {123--156},
27719 url = {ftp: //ftp.cs.wisc.edu/tech-reports/reports/1993/tr1179.ps},
27729 pages = {211--232},
27730 url = {ftp: //ftp.cs.wisc.edu/math-prog/tech-reports/94-03.ps},
27739 publisher = {Springer-Verlag},
27744 pages = {136--163},
27746 url = {ftp: //ftp.cs.wisc.edu/math-prog/tech-reports/97-06.ps}
27755 note = {Available from ftp://ftp.cs.wisc.edu/math-prog/tech-reports/},
27756 annote = {Mathematical Programming Technical Report 94-12}
27774 pages = {327--331}
27784 pages = {421--439}
27794 pages = {153--191}
27815 url = {ftp: //ftp.cs.wisc.edu/math-prog/tech-reports/99-08.ps},
27818 number = {99-08},
27825 title = {An Iterative Sequential Mixed-Integer Approach to Automated Prostate
27841 pages = {707--714}
27851 pages = {220--232}
27878 pages = {157--170}
27887 pages = {143--157}
27896 pages = {203--216}
27906 pages = {368--400}
27916 pages = {187--211}
27921 title = {On Sampling-Controlled Stochastic Approximation},
27925 pages = {915--924}
27930 title = {Models for Optimized Regional Caching in Heterogeneous Video-On-Demand Systems},
27936 url = {http: //www.cs.wisc.edu/tech-reports/reports/1999/tr1402.ps.Z},
27942 title = {Optimized Regional Caching for On-Demand Data Delivery},
27947 url = {ftp://ftp.cs.wisc.edu/math-prog/tech-reports/98-10.ps},
27949 pages = {301--316},
27959 url = {ftp://ftp.cs.wisc.edu/math-prog/tech-reports/98-15.ps},
27961 pages = {163--185}
27966 title = {Dynamic Skyscraper Broadcasts for Video-On-Demand},
27970 pages = {18--32},
27980 pages = {475--484}
27989 pages = {1--63}
27998 pages = {68--87}
28007 pages = {1--14}
28013 pages = {391--405},
28023 pages = {1--22}
28032 pages = {612--634}
28041 pages = {698--711}
28051 publisher = {SIAM--AMS Proceedings},
28053 pages = {73--143}
28063 pages = {102--124},
28067 @TechReport{ ebiefung.kostreva:z-matrices,
28069 title = {{Z}--Matrices annd the Generalized Linear Complementarity Problem},
28082 number = {90-063},
28086 @Article{ eckstein.bertsekas:douglas-rachford,
28088 title = {On the {D}ouglas-{R}achford Splitting Method and the Proximal Point Algorithm for
28092 pages = {293--318},
28096 @Article{ eckstein.bertsekas:douglas-rachford*1,
28098 title = {On the {D}ouglas--{R}achford Splitting Method and the Proximal Point Algorithm
28121 pages = {218--235},
28124 url = {ftp: //ftp.cs.wisc.edu/math-prog/tech-reports/94-17.ps},
28132 url = {ftp: //ftp.cs.wisc.edu/math-prog/tech-reports/97-01.ps},
28136 pages = {65--90}
28150 CM-2}},
28157 title = {Approximate Iterations in {B}regman-Function-Based Proximal Algorithms},
28161 pages = {113--124}
28170 pages = {15--29}
28176 Integer Programming on the {CM}-5},
28179 pages = {199--220},
28183 @TechReport{ eckstein:lions-mercier,
28185 title = {The {L}ions--{M}ercier Splitting Algorithm and the Alternating Direction Method
28190 number = {LIDS-P-1769}
28199 pages = {202--226},
28205 title = {Parallel Branch-and-Bound Algorithms for General Mixed Integer Programming on the
28206 {CM}-5},
28209 pages = {794--814},
28220 number = {27-96}
28230 note = {Report LIDS-TH-1877, Laboratory for Information and Decision Systems, M.I.T.}
28239 pages = {271--281}
28246 publisher = {North--Holland},
28256 pages = {324--353}
28259 @TechReport{ el-bakry.tapia.ea:formulation,
28260 author = {A. S. El-Bakry and R. A. Tapia and T. Tsuchiya and Y. Zhang},
28261 title = {On the formulation and theory of the primal-dual {N}ewton interior-point method
28263 type = {{Technical Report TR92-40}},
28270 title = {A Block-{LU} Update for Large--Scale Linear Programming},
28274 pages = {191--201}
28283 pages = {585--608}
28292 pages = {53--65}
28296 author = {Y. Ermoliev and R. J.-B. Wets {(editors)}},
28299 publisher = {Springer-Verlag},
28318 pages = {313--316}
28327 pages = {850--869}
28341 author = {F. Facchinei and A. Fischer and C. Kanzow and J. -M. Peng},
28354 pages = {107--134}
28359 title = {A Nonsmooth Inexact {N}ewton Method for the solution of Large-Scale Nonlinear
28364 pages = {493--512}
28374 pages = {99--115}
28393 pages = {225--247}
28404 pages = {69--83}
28407 @InProceedings{ fahlman.lebiere:cascade-correlation,
28409 title = {The cascade-correlation learning architecture},
28415 pages = {524--532}
28427 pages = {332--334}
28431 author = {S.--C. Fang and S. Puthenpura},
28434 publisher = {Prentice-Hall, Inc},
28440 title = {An Algorithm for the Solution of the 0--1 Knapsack Problem},
28444 pages = {269--287}
28460 pages = {991--1009},
28462 url = {ftp://ftp.cs.wisc.edu/math-prog/tech-reports/98-02.ps},
28466 number = {98-02},
28484 pages = {35--62},
28485 url = {ftp: //ftp.cs.wisc.edu/math-prog/tech-reports/tr1232.ps},
28496 pages = {475--497},
28497 url = {ftp://ftp.cs.wisc.edu/math-prog/tech-reports/98-04.ps},
28509 url = {ftp://ftp.cs.wisc.edu/math-prog/tech-reports/98-17.ps},
28512 number = {98-17},
28521 pages = {117--136},
28523 url = {ftp: //ftp.cs.wisc.edu/math-prog/tech-reports/94-16.ps},
28534 url = {ftp: //ftp.cs.wisc.edu/tech-reports/reports/1991/tr1030.ps},
28544 pages = {53--71},
28555 pages = {70--71}
28565 pages = {293--305},
28566 url = {ftp://ftp.cs.wisc.edu/tech-reports/reports/1991/tr1056a.ps},
28576 pages = {263--273},
28594 pages = {1--14},
28604 pages = {487--500},
28605 url = {ftp://ftp.cs.wisc.edu/tech-reports/reports/1990/tr971a.ps},
28615 pages = {815--832},
28616 url = {ftp://ftp.cs.wisc.edu/tech-reports/reports/1993/tr1175.ps},
28626 pages = {669--685},
28627 url = {ftp://ftp.cs.wisc.edu/math-prog/tech-reports/95-03.ps},
28639 pages = {1--18},
28640 url = {ftp://ftp.cs.wisc.edu/math-prog/tech-reports/96-08.ps},
28643 number = {96-08},
28645 note = {Also available as ANL/MCS-P708-0398, Mathematics and Computer Science Division,
28653 title = {Models and Solution for On-Demand Data Delivery Problems},
28654 url = {ftp://ftp.cs.wisc.edu/math-prog/tech-reports/99-04.ps},
28663 pages = {175--188},
28667 number = {99-04}
28678 url = {ftp://ftp.cs.wisc.edu/math-prog/tech-reports/99-09.ps},
28680 pages = {143--167},
28683 number = {99-09},
28689 title = {A Practical Approach to Sample-Path Simulation Optimization},
28694 url = {ftp://ftp.cs.wisc.edu/pub/dmi/tech-reports/00-03.ps},
28695 number = {00-03},
28703 booktitle = {Ill--Posed Variational Problems and Regularization Techniques},
28705 pages = {79--98},
28712 url = {ftp://ftp.cs.wisc.edu/math-prog/tech-reports/98-16.ps},
28722 pages = {165--188},
28724 url = {ftp://ftp.cs.wisc.edu/math-prog/tech-reports/98-12.ps},
28729 number = {98-12}
28737 note = {ftp://ftp.cs.wisc.edu/math-prog/condor}
28751 pages = {207--227},
28753 url = {ftp://ftp.cs.wisc.edu/math-prog/tech-reports/97-12.ps},
28757 number = {97-12},
28768 number = {00-05},
28769 url = {ftp://ftp.cs.wisc.edu/pub/dmi/tech-reports/00-05.ps},
28780 pages = {6--8},
28781 url = {ftp://ftp.cs.wisc.edu/math-prog/tech-reports/98-20.ps},
28786 number = {98-20}
28795 pages = {487--506},
28796 url = {ftp://ftp.cs.wisc.edu/math-prog/tech-reports/98-13.ps},
28801 number = {98-13}
28811 url = {ftp://ftp.cs.wisc.edu/math-prog/tech-reports/99-07.ps},
28812 number = {99-07},
28824 number = {00-09},
28825 url = {ftp://ftp.cs.wisc.edu/pub/dmi/tech-reports/00-09.ps},
28836 pages = {669--713},
28837 url = {http: //www.siam.org/journals/sirev/39-4/28596.html},
28847 pages = {244--263},
28848 url = {ftp://ftp.cs.wisc.edu/tech-reports/reports/1994/tr1203.ps},
28854 title = {On Affine Scaling and Semi--Infinite Programming},
28858 pages = {361--364},
28864 title = {An Interior Point Algorithm for Semi--Infinite Linear Programming},
28868 pages = {257--276},
28878 pages = {257--270},
28889 pages = {57--87},
28891 url = {ftp://ftp.cs.wisc.edu/math-prog/tech-reports/94-08.ps},
28901 pages = {181--194},
28902 url = {ftp://ftp.cs.wisc.edu/math-prog/tech-reports/97-04.ps},
28911 url = {ftp://ftp.cs.wisc.edu/math-prog/tech-reports/95-10.ps},
28914 pages = {141--153},
28923 editor = {D.-Z. Du and P. Pardolas and J. Wang},
28927 url = {ftp://ftp.cs.wisc.edu/pub/dmi/tech-reports/00-01.ps},
28932 number = {00-01}
28940 publisher = {Springer-Verlag},
28945 url = {ftp://ftp.cs.wisc.edu/math-prog/tech-reports/98-21.ps},
28949 number = {98-21}
28952 @Article{ ferris.tin-loi:limit,
28953 author = {M. C. Ferris and F. Tin-Loi},
28957 url = {ftp://ftp.cs.wisc.edu/math-prog/tech-reports/99-01.ps},
28960 pages = {209--224},
28965 number = {99-01}
28968 @Article{ ferris.tin-loi:nonlinear,
28969 author = {M. C. Ferris and F. Tin-Loi},
28975 pages = {857--870},
28979 @Article{ ferris.tin-loi:solution,
28980 author = {M. C. Ferris and F. Tin-Loi},
28986 pages = {107--120},
28987 url = {ftp://ftp.cs.wisc.edu/math-prog/tech-reports/minwt.ps},
28997 pages = {229--245},
29009 number = {96--12},
29010 url = {ftp://ftp.cs.wisc.edu/math-prog/tech-reports/96-12.ps}
29019 pages = {359--366},
29029 pages = {53--65},
29039 pages = {169--175},
29045 title = {Linear Programming and Minimum Weight Design -- {A} Comparison of Methods for
29060 url = {ftp://ftp.cs.wisc.edu/math-prog/tech-reports/98-19.ps},
29061 number = {98-19},
29071 pages = {645--658},
29072 url = {ftp://ftp.cs.wisc.edu/tech-reports/reports/1991/tr1009a.ps},
29124 title = {On matrices with nonpositive off-diagonal elements and positive principal
29128 pages = {382--400},
29138 pages = {279--292},
29148 number = {MATH-NM-10-1995},
29154 title = {On the local superlinear convergence of a {N}ewton-type method for {LCP} under
29159 pages = {83--107}
29162 @InCollection{ fischer:ncp-function,
29164 title = {An {NCP}--Function and its Use for the Solution of Complementarity Problems},
29169 pages = {88--105}
29172 @Article{ fischer:newton-type,
29174 title = {A {N}ewton-Type Method for Positive Semidefinite Linear Complementarity
29179 pages = {585--608}
29188 pages = {513--532}
29193 title = {A Special {N}ewton--Type Optimization Method},
29197 pages = {269--284}
29207 pages = {179--188}
29221 Cross-Correlation},
29225 pages = {1645--1657}
29234 pages = {267--284}
29255 publisher = {North--Holland},
29257 pages = {157--173}
29266 pages = {129--150}
29271 title = {Generalized Inverse Methods for the Best Least Squares Solution of Non--Linear
29276 pages = {392--399}
29283 pages = {87--114}
29326 publisher = {Springer-Verlag},
29328 pages = {85--114}
29347 pages = {167--196}
29355 volume = {C-21},
29356 pages = {948--960}
29363 pages = {422--427}
29366 @Article{ forrest.goldfarb:steepest-edge,
29368 title = {Steepest--Edge Simplex Algorithms for Linear Programming},
29372 pages = {341--374}
29382 pages = {263--278}
29390 number = {TRITA-MAT-1993-9},
29394 @TechReport{ forsgren.gill:primal-dual,
29396 title = {Primal-Dual Interior Methods for Nonconvex Nonlinear Programming},
29400 number = {96-3},
29404 @InCollection{ fortin.glowinski:decomposition-coordination,
29406 title = {On Decomposition-Coordination Methods Using an Augmented Lagrangian},
29409 publisher = {North-Holland},
29426 pages = {115--128},
29450 pages = {519--554}
29460 pages = {1911--1921}
29496 pages = {95--110}
29505 pages = {46--77}
29512 pages = {148--156},
29520 title = {Barrier functions and interior-point algorithms for linear programming with
29521 zero-, one-, or two-sided bounds on the variables},
29532 pages = {116--120},
29536 @Article{ friesz.bernstein.ea:day-to-day,
29539 title = {Day-to-day Dynamic Network Disequilibria and Idealized Traveller Information
29544 pages = {1120--1136}
29554 pages = {337--359}
29563 pages = {413--427}
29582 author = {M. Fukushima and Z.--Q. Luo and J. S. Pang},
29588 pages = {5--34}
29598 pages = {99--110}
29603 title = {The Primal {D}ouglas-{R}achford Splitting Algorithm for a Class of Monotone
29608 pages = {1--15}
29618 pages = {17--48}
29626 publisher = {North-Holland},
29646 number = {MCS-P504-0395},
29663 pages = {67--91}
29669 booktitle = {Large--Scale Optimization: State of the Art},
29673 pages = {159--186}
29685 @Article{ gafni.bertsekas:two-metric,
29687 title = {Two-Metric Projection Methods for Constrained Optimization},
29691 pages = {936--964}
29699 note = {Proceedings of Symposium on Parallel Optimization 3, Madison July 7-9, 1993,
29715 publisher = {McGraw-Hill Book Company},
29730 booktitle = {Proceedings of the Eighteenth ACM SIGACT-SIGMOD-SIGART Symposium on Principles of
29731 Database Systems, May 31 - June 2, 1999, Philadelphia, Pennsylvania},
29734 isbn = {1-58113-062-7},
29735 pages = {126--137}
29741 publisher = {Springer-Verlag Wien},
29756 @Article{ garcia-palomares.mangasarian:superlinearly,
29757 author = {U. M. {Garcia--Palomares} and O. L. Mangasarian},
29758 title = {Superlinearly Convergent {Q}uasi--{N}ewton Algorithms for Nonlinearly Constrained
29763 pages = {1--13}
29766 @Article{ garcia-palomares.restuccia:global,
29767 author = {U. M. {Garcia--Palomares} and A. Restuccia},
29772 pages = {290--300}
29775 @InProceedings{ garcia-palomares:superlinearly,
29776 author = {U. M. {Garcia--Palomares}},
29779 pages = {101--119}
29788 pages = {282--289}
29795 publisher = {Prentice-Hall, Inc},
29801 title = {Computers and Intractability, {A} Guide to the Theory of {NP}--Completeness},
29807 @Article{ garey.tarjan.ea:one-processor,
29809 title = {One--Processor Scheduling with Symmetric Earliness and Tardiness Penalties},
29813 pages = {330--348}
29841 pages = {313--334}
29850 pages = {10--12}
29869 pages = {81--90}
29878 pages = {155--173}
29892 title = {Parallel Branch-and-Bound Algorithms: Survey and Synthesis},
29896 pages = {1042--1060}
29901 title = {An automatic one-way dissection algorithm for irregular finite-element problems},
29904 pages = {740--751},
29908 @InProceedings{ georges-schleuter:asparagos,
29910 author = {M. Georges--Schleuter},
29912 pages = {416--421}
29924 @TechReport{ gertz.linderoth.ea:object-oriented,
29926 title = {Object-Oriented Software for Linear Complementarity and Quadratic Programming},
29932 author = {G. de Ghellinck and J.--Ph. Vial},
29937 pages = {425--453}
29946 publisher = {Springer-Verlag}
29949 @Article{ gilbert-lemarechal,
29951 title = {Some Numerical Experiments with Variable-Storage Quasi-Newton Algorithms},
29955 pages = {407--434}
29960 title = {Computing Forward-Difference Intervals for Numerical Optimization},
29964 pages = {310--321}
29973 pages = {239--270}
29986 title = {A Practical Anti-Cycling Procedure for Linearly Constrained Optimization},
29990 pages = {437--474}
30000 pages = {183--209}
30003 @Article{ gill.murray:newton-type,
30005 title = {{N}ewton--Type Methods for Unconstrained and Linearly Constrained Optimization},
30009 pages = {311--350}
30018 publisher = {Springer-Verlag},
30026 publisher = {North--Holland},
30037 pages = {160--169}
30046 pages = {140--155}
30050 author = {K. Glashoff and S.--\AA. Gustafson},
30053 publisher = {Springer-Verlag},
30063 pages = {771--785}
30076 title = {Tabu Search -- Part 1},
30080 pages = {190--206}
30086 Penalisation-Dualit\'{e}, d'une Classe de Problemes de {D}irichlet non Lineares},
30089 volume = {9(R-2)},
30090 pages = {41--76}
30098 address = {B-5000 Namur, Belgium}
30105 publisher = {Addison-Wesley},
30115 pages = {261--279}
30120 title = {A Practical Steepest--Edge Simplex Algorithm},
30124 pages = {361--371}
30135 pages = {53--97}
30152 pages = {584--587}
30161 pages = {105--114}
30170 pages = {205--224}
30194 title = {Multiple Centrality Corrections in a Primal-Dual Method for Linear Programming},
30198 pages = {137--156}
30218 pages = {164--172}
30222 author = {J.-P. Goux and S. Kulkarni and J. Linderoth and M. E. Yoder},
30223 title = {An Enabling Framework for Master-Worker Applications on the Computational Grid},
30235 pages = {161--178}
30245 pages = {421--441}
30255 pages = {831--879}
30260 title = {Generalizations of ${P}_0$-- and ${P}$-- properties; Extended Vertical and
30265 pages = {695--715}
30282 pages = {594--609}
30291 pages = {868--879}
30301 pages = {99--107}
30310 pages = {327--332}
30327 @Article{ griewank.juedes.ea:adol-c,
30329 title = {{ADOL}-{C}: {A} Package for the Automatic Differentiation of Algorithms Written
30334 pages = {131--167}
30344 pages = {379--392}
30353 pages = {272--289}
30362 pages = {779--805}
30372 pages = {385--406}
30381 pages = {707--716}
30397 pages = {169--197}
30402 title = {Generalized {K}uhn--{T}ucker conditions for Mathematical Programming in a
30407 pages = {232--241}
30412 title = {Convergence Behavior of Interior--Point Algorithms},
30416 pages = {215--228}
30426 pages = {128--147}
30435 pages = {441--448}
30444 pages = {853--857}
30448 author = {S.-\AA. Gustafson},
30449 title = {On Numerical Analysis in Semi-Infinite Programming},
30450 booktitle = {Semi-Infinite Programming},
30453 publisher = {Springer-Verlag},
30465 pages = {1141--1156}
30472 school = {Department of Industrial Engineering, University of Wisconsin--Madison}
30477 title = {Toward a more comprehensive cost measure for {CO2}-reductions},
30486 title = {{VEMOD}: {A} {R}icardo--{H}eckscher--{O}hlin--{J}ones Model of World Trade},
30498 pages = {178--184}
30507 pages = {504--511}
30523 pages = {387--395}
30532 number = {1978--20},
30533 type = {Department of Mathematics Paper TRITA--MAT}
30537 author = {S.--P. Han and O. L. Mangasarian},
30542 pages = {293--301}
30546 author = {S.--P. Han and O. L. Mangasarian},
30551 pages = {251--269}
30555 author = {S.--P. Han and J. S. Pang and N. Rangaraj},
30560 pages = {586--607}
30564 author = {S.--P. Han},
30569 pages = {237--248}
30573 author = {S.--P. Han},
30578 pages = {297--309}
30582 author = {S.--P. Han},
30588 pages = {263--282}
30598 pages = {487--523}
30611 pages = {265--284}
30621 pages = {61--64}
30624 @Article{ harker.pang:finite-dimensional,
30626 title = {Finite--dimensional variational inequality and nonlinear complementarity
30631 pages = {161--220}
30637 {B}--Differentiable Equation Approach},
30641 pages = {339--358}
30647 Finite--Dimensional Variational Inequalities},
30651 pages = {29--50}
30656 title = {Generalized {N}ash Games and Quasi-Variational Inequalities},
30659 pages = {81--94},
30665 title = {Lectures on Computation of Equilibria with Equation--Based Methods},
30666 publisher = {CORE Foundation, Louvain--la--Neuve, Universit\'{e} Catholique de Louvain},
30677 pages = {1--28}
30696 pages = {332--365}
30713 pages = {38--41}
30732 pages = {1405--1430}
30741 pages = {191--217}
30746 title = {On some nonlinear differential-functional equations},
30750 pages = {271--310}
30763 title = {On the Relationship between {N}ash--{C}ournot and {W}ardrop Equilibria},
30767 pages = {295--308}
30776 pages = {99--118}
30785 pages = {67--71}
30795 pages = {243--256}
30804 pages = {17--40}
30813 pages = {338--343}
30819 publisher = {McGraw--Hill},
30830 number = {SAND94-2692},
30846 publisher = {Addison-Wesley},
30856 pages = {345--351}
30861 title = {A Review of Numerical Methods for Semi-Infinite Optimization},
30862 booktitle = {Semi-Infinite Programming and Applications},
30865 publisher = {Springer-Verlag},
30875 pages = {777--778}
30884 pages = {79--85},
30892 publisher = {McGraw--Hill},
30896 @Book{ hiriart-urruty.lemarechal:convex,
30897 author = {Jean-Baptiste Hiriart-Urruty and Claude Lemar\'{e}chal},
30908 title = {Introduction to real-analytic sets and real-analytic maps},
30921 pages = {391--405}
30931 pages = {283--290}
30958 pages = {263--265}
30968 pages = {75--84}
30977 pages = {251--271}
30995 pages = {91--106}
31006 pages = {303--313}
31015 pages = {212--229}
31018 @Article{ hoppe.mittelmann:multi-grid,
31020 title = {A Multi-grid Continuation Strategy for Parameter-dependent Variational
31025 pages = {35--46}
31042 pages = {359--366}
31051 pages = {277--292}
31061 pages = {208--223}
31066 title = {Numerical simulation of piston ring in mixed lubrication---a nonaxisymmetrical
31071 pages = {470--478}
31077 Video-On-Demand Systems},
31081 pages = {89--100}
31090 pages = {31--60}
31100 publisher = {North--Holland},
31102 pages = {207--219}
31128 pages = {117--130}
31137 pages = {463--468}
31146 pages = {766--782}
31151 title = {A Reduction Algorithm for the Zero--One Single Knapsack Problem},
31155 pages = {460--463}
31161 Second--Order Directional Derivative},
31172 pages = {455--482}
31188 pages = {227--232},
31195 publisher = {Springer-Verlag},
31208 pages = {309--321}
31218 pages = {33--48}
31223 title = {Probability of Radiation-Induced Complications for Normal Tissues with Parallel
31224 Architecture subject to Non-Uniform Irradiation},
31228 pages = {613--625}
31253 title = {Polynomiality of Primal-Dual Affine Scaling Algorithms for Nonlinear
31257 pages = {315--346},
31266 pages = {140--157},
31275 pages = {178--193},
31311 pages = {439--455}
31319 pages = {110--115}
31336 pages = {293--319},
31347 pages = {865--892}
31356 pages = {240--253}
31365 pages = {475--489}
31374 pages = {7--25}
31380 institution = {Mathematics Research Center, University of Wisconsin--Madison},
31390 institution = {Mathematics Research Center, University of Wisconsin--Madison},
31401 school = {Department of Industrial Engineering, University of Wisconsin--Madison}
31414 @TechReport{ josephy:quasi-newton,
31416 title = {Quasi--{N}ewton Methods for Generalized Equations},
31427 school = {Universit\'{e} de Montpellier II -- Sciences et Techniques du Languedoc},
31442 title = {Tumor and Normal Tissue Responses to Fractionated Non-Uniform Dose Delivery},
31446 pages = {249--262}
31459 title = {Complete solution of a class of elastic-plastic structures},
31463 pages = {193--209}
31473 pages = {1137--1154}
31478 title = {Piecewise linear elastic-plastic analysis},
31482 pages = {757--767}
31492 pages = {643--651}
31501 pages = {366--422},
31512 pages = {581--603}
31517 title = {Theoretical and Numerical Investigation of the {D}-gap function for
31518 Box-Constrained Variational Inequalities},
31522 pages = {55--88}
31531 pages = {103--125}
31536 title = {A Class of {N}ewton-Type Methods for Equality and Inequality Constrained
31541 pages = {173--198}
31546 title = {A New Class of Semismooth {N}ewton-Type Methods for Nonlinear Complementarity
31550 pages = {227--251},
31560 pages = {342--373}
31563 @Article{ kanzow.qi:qp-free,
31564 author = {C. Kanzow and H. -D. Qi},
31565 title = {A {QP}-free constrained {N}ewton-type method for variational inequality
31570 pages = {81--106}
31573 @Article{ kanzow.yamashita.ea:ncp-functions,
31575 title = {New {NCP}-functions and their properties},
31579 pages = {115--135}
31584 title = {Inexact Trust-Region Methods for Nonlinear Complementarity Problems},
31595 {P}-Functions},
31599 pages = {85--92}
31602 @Article{ kanzow:equation-based,
31604 title = {Some Equation--Based Methods for the Nonlinear Complementarity Problem},
31608 pages = {327--340}
31618 pages = {326--341}
31623 title = {An Inexact {QP}--based method for nonlinear complementarity problems},
31633 pages = {851--868},
31643 pages = {139--155}
31648 title = {Semismooth {N}ewton-Type Methods for the Solution of Nonlinear Complementarity
31659 title = {Some Tools Allowing Interior--Point Methods to Become Noninterior},
31671 pages = {457--481}
31680 pages = {107--129}
31689 pages = {445--454}
31698 pages = {161--167}
31707 pages = {626--645}
31716 pages = {373--395}
31733 pages = {85--103}
31755 title = {Multilevel k-way Partitioning Scheme for Irregular Graphs},
31758 number = {95-064},
31769 pages = {457--459}
31778 pages = {462--466}
31788 pages = {133--147}
31803 pages = {291--307},
31814 pages = {191--194}
31824 pages = {1462--1473}
31841 pages = {1311--1323}
31859 pages = {671--680}
31866 publisher = {Springer-Verlag},
31878 pages = {233--236}
31888 pages = {1185--1198}
31898 pages = {249--269}
31910 title = {On Discrete and Discretized Non-linear Elastic Structures in Unilateral Contact
31914 pages = {459--479},
31922 number = {LiTH-IKP-R-798},
31935 pages = {175--200}
31947 pages = {409--422}
31958 pages = {233--264}
31966 pages = {1207--1217},
31973 booktitle = {Inequalities--III},
31976 pages = {159--175}
31982 journal = {Stochastic Programming E-Print Series},
31984 note = {Available from dochost.rz.hu-berlin.de/speps}
31990 publisher = {Addison-Wesley Longman Inc.},
32001 pages = {148--164}
32010 pages = {869--887}
32021 pages = {172--192}
32029 publisher = {North--Holland},
32033 pages = {150--198}
32042 pages = {754--774}
32045 @TechReport{ kojima.megiddo.ea:primal-dual,
32047 title = {A primal-dual exterior point algorithm for linear programming},
32059 publisher = {Springer-Verlag},
32068 {P}-function},
32072 pages = {107--113}
32077 title = {Infeasible interior-point primal-dual potential-reduction algorithms for linear
32093 pages = {331--342}
32096 @Article{ kojima.mizuno.ea:polynomial-time,
32098 title = {A Polynomial-Time Algorithm for a Class of Linear Complementarity Problems},
32102 pages = {1--20}
32107 title = {Global Convergence in Infeasible Interior--Point Algorithms},
32110 pages = {43--72},
32114 @Article{ kojima.shindo.ea:interior-point,
32116 title = {Interior--Point Methods for the Monotone Semidefinite Linear Complementarity
32120 pages = {86--125}
32125 title = {Extensions of {N}ewton and Quasi-{N}ewton Methods to Systems of {PC}$^1$
32130 pages = {352--374}
32139 pages = {1--41}
32149 pages = {421--430}
32158 pages = {723--735}
32182 pages = {747--756}
32192 pages = {47--61}
32198 Hybrid Algorithm 1985-6'},
32202 number = {87--1},
32206 @TechReport{ kortanek:vector-supercomputer,
32208 title = {Vector--Supercomputer Experiments with the Linear Programming Scaling Algorithm},
32212 number = {87--2},
32221 pages = {207--215},
32225 @Article{ kostreva:elasto-hydrodynamic,
32227 title = {Elasto-hydrodynamic Lubrication: {A} non-linear complementarity problem},
32231 pages = {377--397}
32240 pages = {324--334}
32250 pages = {107--112}
32259 pages = {374--376}
32271 pages = {481--492}
32291 title = {{N}ewton's Method for Non--Differentiable Functions},
32293 publisher = {Akademie--Verlag},
32296 pages = {114--125},
32304 note = {Institute for Mathematics, Karl-Franzens University of Graz},
32311 publisher = {Springer-Verlag},
32319 three-dimensional treatment planning evaluation},
32323 optpages = {137-146}
32328 title = {Calculation of Complication Probability Factors for Non-Uniform Normal Tissue
32333 pages = {1623--1630}
32338 title = {A Complementarity Problem Formulation for Two-Dimensional Frictional Contact
32342 pages = {469--480},
32348 title = {Complementarity Problem Formulation of Three-Dimensional Frictional Contact},
32351 pages = {134--140},
32357 title = {Convergence of the {N}elder-{M}ead Simplex method in Low Dimensions},
32361 pages = {112--147}
32371 pages = {1840--1842}
32380 pages = {805--822}
32389 pages = {1--11}
32394 title = {Optimal Single--Machine Scheduling with Earliness and Tardiness},
32398 pages = {1079--1082}
32407 pages = {497-520}
32418 pages = {957--964}
32427 pages = {53--79}
32437 pages = {9--15}
32446 number = {BS--R89xx}
32455 pages = {339--356}
32468 title = {On fixed points of non-expansive piecewise isometric mappings},
32473 pages = {605--624}
32478 title = {Dynamic wedge field techniques through computer-controlled collimator motion and
32484 pages = {87--92}
32494 pages = {309--318}
32504 pages = {217--228}
32510 school = {University of Wisconsin -- Madison},
32523 pages = {823--833}
32534 pages = {145--165}
32543 pages = {111--147}
32553 pages = {245--282},
32563 pages = {413--423}
32572 pages = {681--689}
32585 pages = {95--114}
32594 pages = {164--168}
32603 pages = {1--50},
32609 title = {The Linear $\ell_1$ Estimator and the {H}uber {M}-Estimator},
32612 pages = {457-475},
32622 number = {TR93-1},
32633 number = {TR93-3},
32639 title = {A Merit Function and a {N}ewton-Type Method for Symmetric Linear Complementarity
32651 pages = {155--163}
32660 number = {TR91-13},
32670 pages = {498--516}
32679 pages = {383--411}
32684 title = {A {B}ranch-and-{P}rice Approach to Stochastic Integer Programming},
32696 pages = {493--19}
32700 author = {P.--L. Lions and B. Mercier},
32705 pages = {964--979}
32709 author = {P.--L. Lions},
32715 pages = {204--208}
32724 pages = {104--111},
32734 pages = {503--528}
32743 pages = {311--337}
32754 pages = {1751--1764}
32759 title = {Ensembles semi-analytiques},
32762 address = {Bures-sur-Yvette}
32771 pages = {329--344}
32785 @TechReport{ lopezdesilanes.markusen.ea:anti-competitive,
32786 author = {F. {Lopez-de-Silanes} and J. R. Markusen and T. F. Rutherford},
32787 title = {Anti--Competitive and Rent--Shifting Aspects of Domestic--Content Provisions in
32796 author = {F. {Lopez-de-Silanes} and J. R. Markusen and T. F. Rutherford},
32797 title = {The auto industry and the {N}orth {A}merican free-trade agreement},
32805 author = {F. {Lopez-de-Silanes} and J. R. Markusen and T. F. Rutherford},
32810 pages = {133--151}
32814 author = {F. {Lopez-de-Silanes} and J. R. Markusen and T. F. Rutherford},
32822 title = {Coulomb friction in two-dimensional rigid body systems},
32826 pages = {605--615}
32835 pages = {281--296}
32842 publisher = {Addison-Wesley},
32860 pages = {111--124}
32864 author = {X.-D. Luo and Z.-Q. Luo},
32869 pages = {383--392}
32873 author = {Z.-Q. Luo and O. L. Mangasarian and J. Ren and M. V. Solodov},
32877 pages = {880--892},
32882 author = {Z.-Q. Luo and J. S. Pang and D. Ralph and S.-Q. Wu},
32887 pages = {19--76},
32892 author = {Z.-Q. Luo and J. S. Pang and D. Ralph},
32899 author = {Z.-Q. Luo and J. S. Pang},
32904 pages = {1--28}
32915 pages = {1339--1346}
32919 author = {Z.-Q. Luo and P. Tseng},
32922 pages = {204--225}
32926 author = {Z.-Q. Luo and P. Tseng},
32932 pages = {7--35}
32936 author = {Z.-Q. Luo and P. Tseng},
32942 pages = {1037--1060}
32946 author = {Z.-Q. Luo and P. Tseng},
32951 pages = {846--867}
32955 author = {Z.--Q. Luo and P. Tseng},
32961 pages = {43--54}
32965 author = {Z.-Q. Luo and P. Tseng},
32971 pages = {43--59}
32975 author = {Z.-Q. Luo and P. Tseng},
32981 pages = {157--178}
32985 author = {Z.-Q. Luo and P. Tseng},
32991 pages = {159--165}
32995 author = {Z.-Q. Luo and P. Tseng},
33001 pages = {408--425}
33005 author = {Z.-Q. Luo},
33006 title = {Convergence Analysis of Primal--Dual Interior--Point Algorithms for Convex
33015 title = {Computational Experience with a Primal-Dual Interior Point Method for Linear
33020 pages = {191--222}
33025 title = {On implementing {M}ehrotra's predictor-corrector interior point method for linear
33030 pages = {435--449}
33033 @Article{ lustig.marsten.ea:interior-point,
33035 title = {Interior-Point Methods for Linear Programming: Computational State of the Art},
33040 pages = {1--38}
33050 pages = {433--436}
33061 pages = {1709--1719}
33070 pages = {43--55}
33075 title = {A convolution method of calculating dose from 15 Me{V} x-rays},
33079 pages = {188--196}
33088 pages = {293--307}
33114 pages = {153--186}
33121 pages = {461--473}
33138 pages = {454--466}
33147 pages = {375--392}
33159 pages = {451--471}
33169 pages = {345--372}
33179 pages = {203--209}
33189 pages = {54--66}
33199 pages = {121--130}
33206 publisher = {Addison-Wesley}
33212 Iterative Schemes for the Least 2--norm Solution of Linear Programs},
33216 pages = {1--14}
33226 pages = {437--446}
33236 pages = {37--47}
33246 pages = {32--40}
33255 pages = {745--752}
33263 number = {00-04},
33272 number = {00-06},
33281 number = {99-09},
33291 pages = {1032-1037}
33301 pages = {1--8}
33317 pages = {49--56},
33327 pages = {241--255}
33331 crossref = {coleman.li:large-scale},
33335 pages = {22--31}
33339 author = {O. L. Mangasarian and T.--H. Shiau},
33344 pages = {81--89}
33348 author = {O. L. Mangasarian and T.--H. Shiau},
33354 pages = {583--595}
33363 pages = {277--298}
33373 pages = {103--116}
33382 pages = {570--577}
33400 publisher = {Springer-Verlag},
33402 pages = {307--329},
33412 pages = {74--87}
33418 booktitle = {Proceedings of 6. Symposium uber Operations Research, Augsburg, 7-9 September
33424 pages = {3--15}
33433 pages = {114--122},
33443 pages = {89--92}
33451 pages = {187--192},
33461 pages = {437--445}
33471 pages = {393--402}
33478 pages = {135-146},
33490 pages = {153--164}
33495 title = {Least Norm Solution of Non--Monotone Complementarity Problems},
33500 pages = {217--221}
33503 @Article{ mangasarian:least-norm,
33505 title = {Least--Norm Linear Programming Solution as an Unconstrained Minimization
33510 pages = {240--251}
33519 pages = {263--270}
33528 pages = {444--452}
33538 pages = {200--212}
33545 booktitle = {Applied Mathematics and Parallel Computing - Festschrift for Klaus Ritter},
33546 pages = {175-188},
33549 publisher = {Physica-Verlag A Springer-Verlag Company}
33557 pages = {349--360},
33568 pages = {283--295},
33578 pages = {183-201}
33581 @Article{ mangasarian:multi-surface,
33583 title = {Multi-surface Method of Pattern Separation},
33586 volume = {IT-14},
33587 pages = {801--807}
33594 publisher = {McGraw--Hill},
33605 pages = {206--216}
33615 pages = {123--128}
33623 pages = {1916--1925},
33634 number = {97--13},
33635 url = {ftp: //ftp.cs.wisc.edu/math-prog/tech-reports/97-13.ps}
33644 pages = {21--26}
33654 pages = {465--485}
33663 pages = {209--223}
33673 pages = {30--37}
33682 pages = {772--791}
33695 title = {Global {CO2} Emission Reductions - the Impacts of Rising Energy Costs},
33699 pages = {87--107}
33708 pages = {135--139}
33718 pages = {1--20}
33721 @InCollection{ manne:eta-macro,
33723 title = {{ETA}-{M}acro: {A} {M}odel of Energy-Economy Interactions},
33724 booktitle = {Modeling Energy-Economy Interactions},
33740 author = {P. Marcotte and J.--P. Dussault},
33746 pages = {35--42}
33756 pages = {141--158}
33766 pages = {339--351}
33776 pages = {258--270}
33785 pages = {142--162}
33794 pages = {57--68}
33799 title = {Trade liberalization in a multinational-dominated industry},
33803 pages = {95--118}
33808 title = {Discrete plant-location decisions in an applied general equilibrium model of
33821 pages = {368--386}
33826 title = {An Algorithm for Least--Squares Estimation of Nonlinear Parameters},
33830 pages = {431--441}
33835 title = {A New Algorithm for the 0--1 Knapsack Problem},
33839 pages = {633--644}
33848 publisher = {Annals of Discrete Mathematics 31, North--Holland},
33854 title = {A Mixture of Dynamic Programming and Branch--and--Bound for the Subset--Sum
33859 pages = {765--771}
33862 @Article{ martello.toth:worst-case,
33864 title = {Worst--Case Analysis of Greedy Algorithms for the Subset Sum Problem},
33868 pages = {198--205}
33877 pages = {154--159}
33887 pages = {549--569}
33897 pages = {571--579}
33915 pages = {728--746}
33920 title = {Error bounds for the linear complementarity problem with a {P}-matrix},
33924 pages = {123--136}
33934 pages = {1--18}
33944 pages = {144--162}
33954 pages = {1225--1250}
33975 title = {A Modification of {A}rmijo's Step--Size Rule for Negative Curvature},
33979 pages = {111--115}
33996 pages = {115--133}
34010 title = {Convergence of the {N}elder-{M}ead Simplex Method to a Nonstationary Point},
34014 pages = {148--158}
34019 title = {An implementation of a primal-dual interior point method for linear programming},
34023 pages = {70--83}
34028 title = {Decomposition of Structured Large--Scale Optimization Problems and Parallel
34038 title = {Parallel Bundle-Based Decomposition for Large-Scale Structured Mathematical
34043 pages = {101--127}
34052 pages = {325--337}
34057 title = {On Finding Primal-- and Dual--Optimal Bases},
34061 pages = {63--65}
34066 title = {On the implementation of a primal-dual interior point method},
34070 pages = {575--601}
34087 pages = {518--528}
34105 pages = {23--34}
34114 pages = {957--972}
34122 pages = {141--158},
34148 pages = {341--346}
34157 pages = {243--247}
34162 title = {A Unified approach to infeasible--interior--point algorithms via geometrical
34173 title = {Polynomiality of {K}ojima-{M}egiddo-{M}izuno infeasible-interior-point algorithm
34185 title = {Clinically Relevant Optimization of 3-{D} Conformal Treatments},
34190 pages = {933--944}
34195 title = {Field Shaping for Three-Dimensional Conformal Radiation Therapy and Multileaf
34201 pages = {86--99}
34210 pages = {129--148}
34219 pages = {793--814},
34225 title = {Local Convergence of Interior--Point Algorithms for Degenerate {LCP}},
34229 pages = {131--155}
34234 title = {A Superlinear Infeasible-Interior-Point Affine Scaling Algorithm for {LCP}},
34238 pages = {1--18}
34243 title = {Superlinear Primal-Dual Affine Scaling Algorithms for {LCP}},
34247 pages = {311--333}
34256 pages = {17--41}
34261 title = {On {P}-- and {S}--functions and Related Classes of {N}--Dimensional Nonlinear
34266 pages = {45--68}
34275 pages = {1--20}
34284 pages = {553--572}
34293 pages = {93--113}
34302 number = {ANL/MCS--P40--1288},
34322 number = {MCS-P505-0395},
34328 title = {Issues in Large-Scale Global Molecular Optimization},
34332 number = {MCS-P539-1095},
34343 number = {MCS-P60-0289}
34351 pages = {589--614},
34356 author = {J.--J. Moreau},
34361 pages = {273--299}
34364 @Article{ morrill.lane.ea:dose-volume,
34366 title = {Dose-volume considerations with linear programming},
34371 pages = {1201--1210}
34380 pages = {179--188}
34388 number = {87--7},
34398 pages = {202--206}
34407 pages = {393--404}
34414 pages = {416--421}
34424 pages = {317--330}
34433 pages = {205--215}
34438 title = {A New Scenario Decomposition Method for Large--Scale Stochastic Optimization},
34442 number = {SOR 91-19},
34449 school = {University of Wisconsin--Madison},
34453 url = {ftp: //ftp.cs.wisc.edu/math-prog/tech-reports/00-02.ps}
34470 pages = {391--394}
34496 pages = {92--106}
34516 pages = {322--327}
34523 publisher = {Helderman-Verlag},
34542 pages = {65--108}
34555 title = {Network Economics -- {A} Variational Inequality Approach},
34563 title = {A Numerical Study of the Limited Memory {BFGS} Method and the Truncated-{N}ewton
34568 pages = {358--372}
34573 title = {Equilibrium Points in {N}--Person Games},
34577 pages = {48--49}
34580 @Article{ nash:non-cooperative,
34582 title = {Non-cooperative games},
34586 pages = {286--295}
34589 @Article{ nash:newton-type,
34591 title = {{N}ewton--Type Minimization via {L}anczos Method},
34595 pages = {770--788}
34600 title = {An Efficient Algorithm for the 0--1 Knapsack Problem},
34604 pages = {27--31}
34620 pages = {308--313},
34632 optpages = {47--58},
34653 pages = {273--280}
34663 pages = {53--59}
34672 pages = {673--682}
34681 pages = {1034--1056}
34691 number = {92-01-05}
34701 pages = {99--108}
34707 booktitle = {3-D Radiation Treatment Planning and Conformal Therapy},
34711 pages = {49--55},
34725 title = {Radiation Therapy and You - {A} Guide to Self-Help During Treatment},
34729 edition = {97-2227},
34746 pages = {199--242}
34755 publisher = {Indiana-Purdue University},
34757 pages = {1--12}
34766 pages = {353--364}
34775 pages = {389--395}
34783 pages = {356--362},
34792 pages = {78--87},
34803 pages = {598--604}
34813 pages = {88--95}
34822 pages = {3277--3294}
34832 pages = {591--597}
34835 @Book{ orchard-hays:advanced,
34836 author = {W. Orchard--Hays},
34839 publisher = {McGraw--Hill},
34852 title = {Open economy forces and late 19th century {S}wedish catch-up: a quantitative
34857 pages = {171--203}
34866 pages = {215--259}
34871 title = {Industrial policy, employment policy and the non-traded sector},
34912 pages = {379--384}
34940 pages = {105--130}
34949 pages = {305--320}
34958 pages = {255--278}
34967 pages = {340--357}
34976 pages = {43--71}
34985 pages = {617--629}
34988 @Article{ palacios-gomez.lasdon.ea:nonlinear,
34989 author = {F. Palacios--Gomez and L. Lasdon and M. Engquist},
34994 pages = {1106--1120}
34999 title = {Superlinearly Convergent {Q}uasi--{N}ewton Algorithms for Nonlinearly Constrained
35004 pages = {1--13}
35007 @Article{ panagiotopoulos.al-fahed:robot,
35008 author = {P. D. Panagiotopoulos and A. M. Al-Fahed},
35013 pages = {127--136}
35019 publisher = {Springer-Verlag},
35038 pages = {284--313}
35047 pages = {295--338}
35051 author = {J. S. Pang and S.--P. Han and N. Rangaraj},
35056 pages = {57--82}
35065 pages = {443--465}
35070 title = {A Complementarity Approach to a Quasistatic Multi-Rigid-Body Contact Problem},
35073 pages = {97--138},
35079 title = {Complementarity Formulations and Existence of Solutions of Multi-Rigid-Body
35084 pages = {199--226}
35111 pages = {427--438},
35115 @Article{ pang:b-differentiable,
35117 title = {A {B}--Differentiable Equation Based, Globally and Locally Quadratically
35123 pages = {101--132}
35143 pages = {149--162}
35153 pages = {149--160}
35162 pages = {54--71}
35172 pages = {107--134}
35182 pages = {107--134}
35192 pages = {1--17}
35197 title = {{N}ewton's Method for {B}--Differentiable Equations},
35201 pages = {311--341}
35206 title = {A Posteriori Error Bound for the Linearly--Constrained Variational Inequality
35211 pages = {474--484}
35221 pages = {823--836}
35228 publisher = {Prentice-Hall, Inc},
35233 author = {N. Papanikolaou and T. R. Mackie and C. Meger-Wells and M. Gehring and P.
35240 pages = {1327--1336}
35250 pages = {227--259}
35259 pages = {231--237}
35270 pages = {593--600}
35287 pages = {383--390}
35296 pages = {28--41}
35309 author = {J. -M. Peng},
35318 author = {J. -M. Peng},
35323 pages = {347--356}
35332 pages = {978--979}
35341 pages = {28--66}
35347 publisher = {Lippincott-Raven},
35367 pages = {335--343}
35381 title = {A Review of Constraint Qualifications in Finite--Dimensional Spaces},
35385 pages = {639--654}
35401 title = {Modelling {J}apanese--{A}merican Trade, {A} Study of Asymmetric Interdependence},
35411 publisher = {North--Holland},
35413 pages = {185--189}
35420 pages = {155--161}
35427 pages = {398--405}
35452 publisher = {Springer-Verlag},
35463 pages = {495--519}
35472 pages = {618--628}
35482 pages = {72--84}
35492 pages = {1--18}
35496 author = {E. L. Plambeck and B. --R. Fu and S.M. Robinson and R. Suri},
35503 pages = {70--75}
35506 @Article{ plambeck.fu.ea:sample-path,
35507 author = {E. L. Plambeck and B. --R. Fu and S.M. Robinson and R. Suri},
35508 title = {Sample-Path Optimization of Convex Stochastic Performance Functions},
35512 pages = {137--176}
35520 booktitle = {Advances in Kernel Methods {-} Support Vector Learning},
35522 pages = {185-208},
35531 address = {Gauthier--Villars, Paris}
35539 volume = {16-R1},
35540 pages = {35--43}
35557 pages = {337--349}
35567 pages = {740--751},
35577 pages = {42--58}
35586 pages = {94--112},
35629 pages = {133--143}
35638 number = {RR--2445},
35642 @Article{ potra.sheng:large-step,
35644 title = {A Large--Step Infeasible--Interior--Point Method for the ${P}_*$--Matrix {LCP}},
35648 pages = {318--335}
35653 title = {An infeasible interior-point predictor-corrector algorithm for linear
35658 pages = {19--32}
35663 title = {An ${O}(n{L})$ infeasible--interior--point algorithm for {LCP} with quadratic
35672 @TechReport{ potra:predictor-corrector,
35674 title = {On a predictor-corrector method for solving linear programs from infeasible
35685 title = {A quadratically convergent infeasible interior-point algorithm for linear
35699 pages = {27--63}
35711 pages = {51--67},
35722 pages = {155--162}
35733 pages = {187--218}
35763 pages = {283--298}
35788 pages = {67--85}
35795 publisher = {Springer-Verlag},
35805 school = {University of Wisconsin--Madison},
35829 title = {Semismooth {K}arush--{K}uhn--{T}ucker Equations and Convergence Analysis of
35830 {N}ewton Methods and Quasi--{N}ewton Methods for Solving these Equations},
35833 pages = {301--325},
35838 author = {H. -D. Qi and J. -M. Peng},
35853 pages = {121--146},
35866 pages = {353--368}
35875 pages = {227--244}
35880 title = {Regular pseudo-smooth {NCP} and {BVIP} functions and globally and quadratically
35896 pages = {31--58}
35905 pages = {165--169}
35910 title = {On Connections between Zero--One Integer Programming and Concave Programming
35915 pages = {680--684}
35924 pages = {671--677}
35932 pages = {1041--1050},
35943 pages = {352--389}
35972 @InProceedings{ reckwerdt.mackie.ea:three-dimensional,
35974 title = {Three-Dimensional Inverse Treatment Optimization for Tomotherapy},
35981 pages = {420--422}
35984 @Article{ reid:sparsity-exploiting,
35986 title = {A Sparsity-Exploiting Variant of the {B}artels-{G}olub Decomposition for Linear
35991 pages = {55--69}
35997 publisher = {Prentice-Hall, Inc},
36015 pages = {307--320}
36027 @Article{ renegar:polynomial-time,
36029 title = {A Polynomial--Time Algorithm, based on {N}ewton's method, for Linear
36034 pages = {59--94}
36043 pages = {400--407}
36048 title = {Analysis of Sample-Path Optimization},
36052 pages = {513--528}
36055 @InCollection{ robinson:bundle-based,
36057 title = {Bundle-Based Decomposition: Conditions for Convergence},
36061 publisher = {Gauthier-Villaars},
36063 pages = {435--447}
36066 @InCollection{ robinson:bundle-based*1,
36068 title = {Bundle-Based Decomposition: Description and Preliminary Results},
36072 publisher = {Springer-Verlag},
36074 pages = {751--756},
36085 pages = {206--214}
36094 pages = {341--347}
36101 pages = {346--367}
36110 pages = {128--141}
36121 pages = {240--248},
36125 @Article{ robinson:implicit-function,
36127 title = {An Implicit--Function Theorem for a Class of Nonsmooth Functions},
36131 pages = {292--309}
36136 title = {Local Epi--Continuity and Local Optimization},
36140 pages = {208--222}
36150 pages = {217--230}
36160 pages = {45--66}
36169 pages = {221--229}
36178 pages = {291--305}
36187 pages = {415--425}
36194 pages = {282--291},
36199 publisher = {Springer-Verlag},
36209 pages = {691--714}
36218 pages = {127--140}
36227 pages = {161--169}
36236 pages = {130--143}
36251 pages = {518--535}
36260 pages = {536--548}
36275 pages = {754--769}
36285 pages = {497--513}
36294 pages = {43--62}
36298 author = {R. T. Rockafellar and R. J.--B. Wets},
36299 title = {Generalized Linear-Quadratic Problems of Deterministic and Stochastic Optimal
36304 pages = {810--822}
36308 author = {R. T. Rockafellar and R. J.--B. Wets},
36309 title = {A {L}agrangian Finite Generation Technique for Solving Linear-Quadratic Problems
36314 pages = {63--93}
36317 @InCollection{ rockafellar.wets:linear-quadratic,
36318 author = {R. T. Rockafellar and R. J.--B. Wets},
36319 title = {Linear-Quadratic Programming Problems with Stochastic Penalties: the Finite
36322 publisher = {Springer-Verlag},
36324 editor = {V. I. Arkin and A. Shiraer and R. J.--B. Wets},
36326 pages = {545--560},
36331 author = {R. T. Rockafellar and R. J.--B. Wets},
36336 pages = {119--147}
36353 pages = {268--285}
36363 pages = {97--116}
36373 pages = {497--510}
36378 title = {Computational Schemes for Large--Scale Problems in Extended Linear--Quadratic
36383 pages = {447--474}
36404 @Article{ rockafellar:first-,
36406 title = {First-- and Second--Order Epi--Differentiabilty in Nonlinear Programming},
36410 pages = {75--108}
36415 title = {A Generalized Approach to Linear-Quadratic Programming},
36419 pages = {58--66},
36427 pages = {368--390}
36430 @InCollection{ rockafellar:large-scale,
36432 title = {Large-Scale Extended Linear-Quadratic Programming and Multistage Optimization},
36438 pages = {247--261}
36441 @Article{ rockafellar:linear-quadratic,
36443 title = {Linear-Quadratic Programming and Optimal Control},
36447 pages = {781--814}
36456 pages = {75--88}
36463 pages = {1--26}
36472 pages = {877--898}
36481 pages = {555--562}
36486 title = {Multistage Convex Programming and Discrete-Time Optimal Control},
36490 number = {2-3},
36491 pages = {225--245}
36509 pages = {19--28}
36521 author = {C. Roos and T. Terlaky and J.--Ph. Vial},
36522 title = {Theory and Algorithms for Linear Optimization: An Interior-Point Approach},
36533 number = {WP-96-013},
36534 address = {A-2361 Laxenburg, Austria}
36544 pages = {141--152}
36547 @TechReport{ rosenblatt:perceptron-a,
36549 title = {The perceptron--a perceiving and recognizing automaton},
36554 number = {85-460-1}
36581 pages = {175--184}
36590 pages = {66--80}
36604 title = {A Comparison of Maximum-Likelihood and Iterative Filtered Backprojection
36614 publisher = {McGraw--Hill},
36623 publisher = {McGraw--Hill},
36636 pages = {318--362}
36653 publisher = {Springer-Verlag},
36657 pages = {93--108}
36662 title = {{L}'accord de libre-echange entre le {M}aroc et la {CE}: une evaluation
36685 pages = {1--46},
36702 pages = {1299--1324},
36744 pages = {784--793}
36754 pages = {856--869}
36771 pages = {115--124}
36791 pages = {1147--1170}
36800 pages = {445--454}
36809 pages = {1328--1343}
36836 pages = {424--445}
36845 pages = {1136--1158}
36854 pages = {439--455}
36863 isbn = {0-262-19416-3}
36871 pages = {617--652},
36893 pages = {121--152}
36902 pages = {583--602}
36908 booktitle = {Proceedings of the Parallel Object-Oriented Methods and Applications ({POOMA})},
36920 pages = {327--343},
36931 pages = {563--578}
36937 school = {University of Wisconsin -- Madison},
36948 pages = {317--337}
36958 note = {A story--poem about the activities of such unusual animals as the Nook, Wump,
36968 pages = {1303--1310}
36973 title = {An Infeasible Interior--Point Method for Linear Complementarity Problems},
36977 pages = {620--640}
36996 pages = {7--14}
37023 pages = {111--143}
37029 publisher = {Prentice-Hall, Inc},
37036 title = {A Quadratically {CO}nvergent Infeasible-Interior-Point {AL}gorithm for {LCP} with
37041 pages = {304--317}
37070 pages = {721--744},
37072 url = {ftp://ftp.cs.wisc.edu/math-prog/tech-reports/98-07.ps},
37076 number = {98-07},
37087 pages = {14--31}
37090 @Article{ sherali.soyster.ea:stackelberg-nash-cournot,
37092 title = {{S}tackelberg--{N}ash--{C}ournot Equilibria: Characterization and Computation},
37096 pages = {253--276}
37105 pages = {409--426}
37109 author = {T.--H. Shiau},
37122 pages = {501--529}
37129 publisher = {Springer-Verlag},
37140 pages = {1007--1051}
37149 pages = {583--602}
37154 title = {A Family of Trust--Region--Based Algorithms for Unconstrained Minimization},
37158 pages = {44--67}
37168 pages = {65--183}
37173 title = {Optimal Single--Machine Scheduling with Earliness and Tardiness Penalties},
37177 pages = {62--69}
37182 title = {{CORBA} - Fundamentals and Programming},
37188 @TechReport{ simantiraki.shanno:infeasible-interior-point,
37190 title = {An infeasible-interior-point algorithm for linear complementarity problems},
37192 number = {7-95},
37198 @InProceedings{ simantiraki.shanno:infeasible-interior-point*1,
37200 title = {An Infeasible-Interior-Point Algorithm for Solving Mixed Complementarity
37203 pages = {386--404}
37224 optpages = {1--32},
37231 title = {Design of Multicategory Pattern Classifiers with Two-Category Classifier Design
37236 pages = {367--372}
37245 pages = {295--304}
37254 pages = {291--303}
37262 volume = {C-17},
37263 pages = {367--372}
37271 pages = {765--776},
37277 title = {Modified Projection--Type Methods for Monotone Variational Inequalities},
37280 pages = {1814--1830},
37298 pages = {441--461},
37308 pages = {199--223}
37327 author = {G. E. Stavroulakis and P. D. Panagiotopoulos and A. M. Al-Fahed},
37333 pages = {599--614}
37361 title = {Asymptotic Results for Goodness-of-Fit Statistics with Unknown Parameters},
37365 pages = {357--369}
37374 pages = {730--737}
37383 pages = {19--34}
37388 title = {An Implicit Time-Stepping Scheme for Rigid Body Dynamics with Inelastic
37393 pages = {2673--2691}
37400 publisher = {Springer-Verlag},
37406 title = {The complexity of an infeasible interior--point path--following method for the
37411 pages = {1--12}
37414 @Article{ stone:cross-validatory,
37416 title = {Cross-validatory choice and assessment of statistical predictions},
37420 pages = {111--147}
37446 publisher = {SPIE--The International Society for Optical Engineering},
37448 pages = {861--870},
37452 @Article{ subramanian:gauss-newton,
37454 title = {Gauss--{N}ewton Methods for the Complementarity Problem},
37458 pages = {467--482}
37472 institution = {Mathematics Research Center, University of Wisconsin--Madison},
37494 pages = {3781--3800},
37498 @Article{ sun.qi:ncp-functions,
37500 title = {On {NCP}-Functions},
37508 inequality problems and a damped {G}auss-{N}ewton method},
37512 pages = {388--413}
37521 pages = {123--140}
37534 title = {A Thermal Elastic Theory of Piston-Ring and Cylinder-Bore Contact},
37537 pages = {141--153},
37543 title = {Minimizing the Sum of Absolute Lateness in Single--Machine and Multimachine
37548 pages = {325--333}
37553 title = {Generalizations of ${P}_0$-- and ${P}$-- properties; extended vertical and
37555 institution = {Department of Mathematics, University of Maryland--Baltimore County},
37558 number = {92--16},
37568 pages = {221--238}
37578 pages = {369--383}
37588 pages = {310--331}
37597 pages = {430--454}
37606 pages = {383--399}
37613 pages = {434--439}
37620 pages = {177--183}
37629 pages = {670--690}
37638 pages = {1005--1011}
37643 title = {Solutions of Ill--Posed Problems},
37649 @InProceedings{ tin-loi.ferris:complementarity,
37650 author = {F. Tin-Loi and M. C. Ferris},
37654 pages = {1029--1036},
37658 series = {Proceedings of APCOM '99, Fourth Asia-Pacific Conference on Computational
37660 url = {ftp: //ftp.cs.wisc.edu/math-prog/tech-reports/99-02.ps},
37665 number = {99-02}
37668 @InProceedings{ tin-loi.ferris:holonomic,
37669 author = {F. Tin-Loi and M. C. Ferris},
37676 pages = {2183--2190},
37680 @InProceedings{ tin-loi.ferris:simple,
37681 author = {F. Tin-Loi and M. C. Ferris},
37685 (ICCCBE-VII), Seoul, Korea, 19-21 August},
37687 publisher = {Techno-Press},
37690 pages = {511--518},
37694 @Article{ tin-loi.misa:large,
37695 author = {F. Tin-Loi and J. S. Misa},
37699 pages = {741--762},
37703 @Article{ tin-loi.pang:elastoplastic,
37704 author = {F. Tin-Loi and J. S. Pang},
37709 pages = {299--312}
37712 @Article{ tin-loi.vimonsatit:nonlinear,
37713 author = {F. Tin-Loi and V. Vimonsatit},
37714 title = {Nonlinear Analysis of Semi-Rigid Frames: a Parametric Complementarity Approach},
37718 pages = {115--124}
37723 title = {Uniqueness results and algorithm for Stackelberg-Cournot-Nash equilibria},
37727 pages = {21--36}
37737 pages = {33--51}
37747 pages = {409--424}
37753 publisher = {Springer-Verlag},
37767 pages = {135--144}
37772 title = {An Assesment of Non--Monotone Linesearch Techniques for Unconstrained
37777 pages = {725=-739}
37782 title = {An Assesment of Non--Monotone Linesearch Techniques for Unconstrained
37797 pages = {231--252}
37800 @Article{ toint:non-monotone,
37802 title = {A Non--Monotone Trust--Region Algorithm for Nonlinear Optimization subject to
37807 pages = {69--94}
37815 publisher = {Springer-Verlag},
37828 pages = {7--11}
37837 pages = {123--145}
37846 pages = {1--25}
37859 title = {On Dynamic Multi-Rigid-Body Contact Problems},
37862 pages = {267--279},
37868 title = {Dynamic multi-rigid-body systems with concurrent distributed contacts friction},
37870 pages = {2276--2281},
37881 number = {LIDS-P-1995},
37892 pages = {446--460}
37902 pages = {119--138}
37912 pages = {214--242}
37922 pages = {214--242}
37927 title = {Dual Coordinate Ascent Methods for Non--Strictly Convex Minimization},
37931 pages = {231--248}
37934 @Article{ tseng:fortified-descent,
37936 title = {Fortified-Descent Simplicial Search Method: a General Approach},
37939 pages = {269--288},
37950 pages = {17--37}
37966 pages = {438--441}
37984 pages = {307--311}
37991 booktitle = {Contributions to the Calculus of Variations, 1933--1937},
37995 pages = {407--448}
38001 Flow-Injection Systems},
38005 pages = {31--42}
38011 of resistive piecewise-linear circuits},
38015 pages = {1382--1391}
38024 pages = {395--407}
38027 @Article{ vanderbei:affine-scaling,
38029 title = {Affine--Scaling for Linear Programs with Free Variables},
38033 pages = {31--44}
38038 title = {Solving Mixed Integer 0-1 Programs by Automatic Reformulation},
38041 pages = {45--57},
38068 pages = {100--113}
38077 pages = {479--493}
38086 pages = {367--375}
38090 author = {H.--J. Wacker},
38094 editor = {H.--J. Wacker},
38097 pages = {1--35}
38100 @Article{ wakefield.tin-loi:large,
38101 author = {R. R. Wakefield and F. Tin-Loi},
38107 pages = {229--242}
38110 @Article{ wakefield.tin-loi:large*1,
38111 author = {R. R. Wakefield and F. Tin-Loi},
38117 pages = {379--391}
38126 pages = {152--163}
38150 pages = {159--196},
38156 title = {A Stochastic Steepest-Descent Algorithm},
38160 pages = {307--323}
38169 pages = {399--417}
38177 pages = {325--378}
38186 pages = {588--593}
38196 pages = {281--310}
38205 pages = {317--323}
38214 pages = {275--288}
38223 pages = {36--46}
38233 pages = {1895--1914}
38270 author = {R. J.-B. Wets},
38275 editor = {R. W. Cottle and F. Giannessi and J.--L. Lions},
38278 pages = {375--403}
38282 author = {R. J.-B. Wets},
38285 publisher = {Springer-Verlag},
38287 editor = {Yu. M. Ermoliev and R. J. -B. Wets},
38289 pages = {65--93}
38294 title = {Some asymptotic results for learning in single hidden-layer feedforward network
38300 pages = {1003--1013}
38309 pages = {425--461}
38317 pages = {133--140}
38361 pages = {9193--9196}
38369 wisc.edu/math-prog/cpo-dataset/machine-learn/cancer1/}
38379 pages = {396--404}
38387 cs.wisc.edu/math-prog/cpo-dataset/machine-learn/WDBC/}
38395 cs.wisc.edu/math-prog/cpo-dataset/machine-learn/WPBC/}
38412 pages = {69--89}
38422 pages = {213--214}
38427 title = {A Superlinear Infeasible--Interior--Point Algorithm for Monotone Complementarity
38432 pages = {815--838}
38437 title = {A Superquadratic Infeasible--Interior--Point Method for linear complementarity
38442 number = {MCS--P418--0294},
38455 @Article{ wright:infeasible-interior-point,
38457 title = {An Infeasible--Interior--Point Algorithm for Linear Complementarity Problems},
38460 pages = {29--51},
38464 @Article{ wright:path-following,
38466 title = {A Path--Following Infeasible--Interior--Point Algorithm for Linear
38471 pages = {79--106}
38474 @TechReport{ wright:path-following*1,
38476 title = {A Path--Following Infeasible--Interior--Point Algorithm for Linear and Quadratic
38480 number = {MCS--P401--1293},
38484 @Book{ wright:primal-dual,
38486 title = {Primal--Dual Interior--Point Methods},
38497 number = {MCS--P808--0400},
38503 title = {Solution of Discrete--Time Optimal Control Problems on Parallel Computers},
38507 pages = {221--238}
38512 title = {Morphology-guided radiosurgery treatment planning and optimization for multiple
38518 pages = {2151--2160}
38523 title = {{SOPLEX}: The Sequential Object-Oriented Simplex Class Library},
38533 pages = {151--194}
38543 pages = {195--216}
38553 pages = {303--317}
38559 {B}-differentiable equation approach},
38568 title = {A Polynomial Time Interior-Point Path-Following Algorithm for {LCP} based on
38569 {C}hen-{H}arker-{K}anzow Smoothing Techniques},
38573 pages = {91--104}
38578 title = {The Global Linear Convergence of an Infeasible Non-Interior Path-Following
38579 Algorithm for Complementarity Problems with Uniform {P}-Functions},
38593 pages = {155--171}
38596 @Article{ yamamoto:path-following,
38598 title = {A Path--Following Algorithm for Stationary Point Problems},
38602 pages = {181--198}
38612 pages = {469--492}
38621 pages = {653--663},
38631 pages = {439--456}
38636 title = {Some Properties of the Restricted {NCP}-Functions for the Nonlinear
38652 pages = {425--436}
38662 pages = {247--254}
38671 pages = {123--141}
38689 pages = {285--300}
38698 school = {Department of Engineering--Economic Systems, Stanford University}
38703 title = {Interior-Point Algorithms: Theory and Analysis},
38710 author = {W. --C. Yu},
38715 pages = {68--77}
38724 pages = {2085--2091}
38734 pages = {269--285}
38741 publisher = {Prentice-Hall, Inc},
38761 pages = {344--358}
38766 title = {Massively Parallel Row-Action Algorithms for some Nonlinear Transportation
38771 number = {89-09-10},
38781 pages = {147--163}
38790 pages = {43--56}
38799 number = {90-03-01},
38810 number = {89-10-02},
38815 author = {J. Zhang and N.--H. Kim and L. Lasdon},
38820 pages = {1312--1331}
38831 pages = {413--422},
38836 title = {A superlinearly convergent polynomial primal-dual interior-point algorirthm for
38841 pages = {118--133}
38846 title = {Superlinear convergence of infeasible interior-point methods for linear
38850 number = {92-15},
38856 title = {On the Convergence of a Class of Infeasible Interior--Point Methods for the
38861 pages = {208--227}
38866 title = {On the convergence of a class of infeasible interior-point methods for the
38871 pages = {208--227}
38874 @Article{ zhu.rockafellar:primal-dual,
38876 title = {Primal-Dual Projected Gradient Algorithms for Extended Linear-Quadratic
38881 pages = {751--783}
38886 title = {Modified Proximal Point Algorithm for Extended Linear--Quadratic Programming},
38890 pages = {182--205}
38893 @Article{ zhu:primal-dual,
38895 title = {On the Primal--Dual Steepest Descent Algorithm for Extended Linear--Quadratic
38900 pages = {114--128}
38917 pages = {49--62}
38926 publisher = {Springer-Verlag},
38947 @Proceedings{ coleman.li:large-scale,
38952 note = {Proceedings of the Workshop on Large-Scale Numerical Optimization, Cornell
38953 University, Ithaca, New York, October 19-20, 1989},
38954 booktitle = {Large-Scale Numerical Optimization}
38990 publisher = {Springer-Verlag},
39028 publisher = {Springer-Verlag},
39031 pages = {240--251},
39052 title = {Introduction to Derivative-Free Optimization},
39058 isbn = {0-89871-460-5}
39079 pages = {303--320},
39088 pages = {283--298},
39106 pages = {268--285},
39117 pages = {2633--2649},
39128 pages = {A4105--A4130},
39133 title = {Nonsymmetric reduction-based algebraic multigrid},
39138 pages = {S242--S268},
39151 title = {Streamline upwind/{Petrov-Galerkin} formulations for convection dominated flows
39152 with particular emphasis on the incompressible {Navier-Stokes} equations},
39156 number = {1-3},
39157 pages = {199--259},
39167 pages = {1--12},
39173 title = {Metric-Based Anisotropic Mesh Adaptation},
39180 title = {A quasi-minimal residual variant of the {Bi-CGSTAB} algorithm for nonsymmetric
39187 pages = {338--347},
39193 title = {A comparison of preconditioned {K}rylov subspace methods for large-scale
39235 title = {A one-dimensional mathematical model for shear-induced droplet formation in co-flowing fluids},
39239 doi = {10.1007/s00162-024-00690-5},
39244 title = {Uncertainty Quantification of Shear-induced Paraffin Droplet Pinch-off in Hybrid Rocket Motors},
39253 title = {Performance Portable Solid Mechanics via Matrix-Free $p$-Multigrid},
39269 pages = {539-571},
39270 isbn = {978-0-323-85733-8},
39271 doi = {https://doi.org/10.1016/B978-0-323-85733-8.00020-2},
39282 pages = {B360-B381},
39300 title = {A Numerical Study of {Landau} Damping with {PETSc-PIC}},
39306 pages = {135--152},
39323 title = {Structure Preservation using Discrete Gradients in the Vlasov-Poisson-Landau System},
39332 title = {Efficient N-to-M Checkpointing Algorithm for Finite Element Simulations},
39363 doi = {10.1007/s00366-025-02175-3},
39364 url = {https://link.springer.com/content/pdf/10.1007/s00366-025-02175-3.pdf},
39370 title = {Drop formation in a one-dimensional approximation of the {Navier--Stokes}
39375 pages = {205--221},
39381 title = {A Particle Basis Vlasov-Poisson-Landau Solver for Plasma Simulation in PETSc},
39391 title = {Structure-Preserving Particle-In-Cell Methods for the Vlasov-Poisson-Landau
39395 school = {University at Buffalo, Program in Computational and Data-Enabled Science and
39403 title = {Droplet Formation: One-dimensional Mathematical Model and Computations},
39406 school = {University at Buffalo, Program in Computational and Data-Enabled Science and
39438 title = {On the positivity of matrix-vector products},
39442 pages = {253--258},
39458 journal = {Journal of Non-Equilibrium Thermodynamics},
39461 pages = {89--100},
39462 doi = {10.1515/jnet-2017-0034},
39469 title = {Accurate Monotonicity-Preserving Schemes with {Runge--Kutta} Time Stepping},
39474 pages = {83--99},
39475 issn = {0021-9991},
39481 title = {Relaxation {Runge--Kutta} methods: Conservation and stability for inner-product norms},
39486 pages = {2850--2870},
39491 title = {Relaxation {Runge--Kutta} methods for {Hamiltonian} problems},
39501 title = {High order {Runge--Kutta} methods on manifolds},
39502 author = {Hans Munthe-Kaas},
39506 pages = {115--127},
39516 pages = {143--146},
39533 school = {Universit{\'e} Paris-Est},
39538 title = {A generalized-$\alpha$ method for integrating the filtered Navier--Stokes equations with a stabilized finite element method},
39542 number = {3-4},
39543 pages = {305--319},
39553 pages = {93--113},
39558 title = {On the {Hamiltonian} interpolation of near-to-the identity symplectic mappings with application to symplectic integration algorithms},
39562 pages = {1117--1143},
39580 pages = {449--467},
39585 title = {On upstream differencing and Godunov-type schemes for hyperbolic conservation laws},
39590 pages = {35--61},
39596 author = {Gerald Feinberg and Richard M Friedberg and Tsung-Dao Lee and Hai-Cang Ren},
39599 pages = {343--368},
39604 title = {Physics of shock waves and high-temperature hydrodynamic phenomena},
39612 title = {Linear-algebraic representation and transformation of unstructured meshes},
39615 pages = {154--166},
39628 pages = {816--833},
39633 title = {Accuracy of stable, high-order finite difference methods for hyperbolic systems with non-smooth wave speeds},
39637 pages = {2356--2387},
39642 title = {Hybridized summation-by-parts finite difference methods},
39652 title = {Community-driven code comparisons for three-dimensional dynamic modeling of sequences of earthquakes and aseismic slip},
39653 author = {Junle Jiang and Brittany A Erickson and Val{\`e}re R Lambert and Jean-Paul Ampuero and Ryosuke Ando and Sylvain D Barbot and Camilla Cattania and Luca Dal Zilio and Benchun Duan and Eric M Dunham and Alice-Agnes Gabriel and Nadia Lapusta and Duo Li and Meng Li and Dunyu Liu and Yajing Liu and So Ozawa and Casper Pranger and Ylona van Dinther},
39662 title = {A non-stiff summation-by-parts finite difference method for the scalar wave equation in second order form: Characteristic boundary conditions and nonlinear interfaces},
39672 title = {A Computational Framework for Time-Dependent Deformation in Viscoelastic Magmatic Systems},
39682 title = {A High-order Accurate Summation-by-Parts Finite Difference Method for Fully-dynamic Earthquake Sequence Simulations within Sedimentary Basins},
39691 author = {Brittany A Erickson and Junle Jiang and Val{\`e}re Lambert and Sylvain D Barbot and Mohamed Abdelmeguid and Martin Almquist and Jean-Paul Ampuero and Ryosuke Ando and Camilla Cattania and Alexandre Chen and Luca Dal Zilio and Shuai Deng and Eric M. Dunham and Ahmed E. Elbanna and Alice‐Agnes Gabriel and Tobias W. Harvey and Yihe Huang and Yoshihiro Kaneko and Jeremy E. Kozdon and Nadia Lapusta and Duo Li and Meng Li and Chao Liang and Yajing Liu and So Ozawa and Andrea Perez‐Silva and Casper Pranger and Paul Segall and Yudong Sun and Prithvi Thakur and Carsten Uphoff and Ylona van Dinther and Yuyun Yang},
39695 pages = {499--523},
39700 title = {On solving large-scale limited-memory quasi-{N}ewton equations},
39704 pages = {196--225},
39709 @article{Ritto-CorreaCamotim2008,
39710 title={On the arc-length and other quadratic control methods: Established, less known and new implementation procedures},
39712 ISSN={0045-7949},
39716 author={Ritto-Corr{\^{e}}a, Manuel and Camotim, Dinar},
39719 pages={1353-1368},
39726 ISSN={0003-6900, 2379-0407},
39742 pages = {33--42},
39747 title = {Underworld3: Mathematically Self-Describing Modelling in Python for Desktop, HPC and Cloud},
39756 title = {Development of a River Dynamical Core for E3sm to Simulate Compound Flooding on Exascale-Class Heterogeneous Supercomputers},
39764 title = {Large-signal analysis of a silicon Read diode oscillator},
39769 pages = {64--77},
39770 doi = {10.1109/T-ED.1969.16566},
39775 title = {Fluid moment models for {Landau} damping with application to the ion-temperature-gradient instability},
39799 title = {Machine-learning heat flux closure for multi-moment fluid modeling of nonlinear {Landau} damping},
39812 title = {Reducing communication in algebraic multigrid with multi-step node aware communication},
39817 pages = {547--561},
39832 url = {https://news.microsoft.com/source/features/innovation/microfluidics-liquid-cooling-ai-chips/},
39833 note = {Accessed: 2026-02-11},
39838 title = {An abstraction for solving multi-domain problems using finite element methods},
39850 pages = {2553--2569},
39859 pages = {32-42},
39860 issn = {0168-874X},
39867 title = {A graph-based computational framework for simulation and optimisation of coupled infrastructure networks},
39872 pages = {3163--3176},
39873 doi = {10.1049/iet-gtd.2016.1582},