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/petsc/lib/petsc/bin/maint/petsclinter/petsclinter/
H A Dpkg_consistency_checks.py10 def assert_py_versions_match(config_file: str, toml_data: dict[str, Any]) -> None:
13 def tuplify_version_str(version_str: str) -> tuple[int, int, int]:
31 def assert_version_match(tool_name: str, version_str: str) -> None:
45 def assert_requirements_match(toml_file: str, toml_data: dict[str, Any], req_file: str, req_lines: …
54 def load_toml_data(toml_path: str) -> dict[str, Any]:
75 def load_requirements_data(req_path: str) -> list[str]:
H A Dqueue_main.py27 def __init__(self, filename: str, *args, **kwargs) -> None:
33 def __handle_error(error_prefix: str, filename: str, error_queue: ParallelPool.ErrorQueueType, file…
94 def __init__(self, verbose: bool, print_prefix: str, lock: ParallelPool.LockType) -> None:
136 updated_check_function_map: dict[str, FunctionChecker],
137 updated_classid_map: dict[str, str], argument
139 compiler_flags: list[str],
H A Dmain.py92 …anitize_compiler_flags(petsc_dir: Path, petsc_arch: str, verbose: int, extra_compiler_flags: Opti…
102 petsc_arch: str,
109 check_function_filter: Optional[Collection[str]] = None,
112 extra_compiler_flags: Optional[list[str]] = None,
113 extra_header_includes: Optional[list[str]] = None,
333 def str2bool(v: Union[str, bool]) -> bool:
380 def str2int(v: str) -> int:
422 …lf, parser: argparse.ArgumentParser, namespace: argparse.Namespace, values: Union[str, bool, Seque…
450 def parse_command_line_args(argv: Optional[list[str]] = None, parent_parsers: Optional[list[argpars…
472 def expand_argv_globs(in_argv: list[str], diagnostics: Iterable[str]) -> list[str]:
H A Dtest_main.py80 def test(generated_output: list[str], reference_file: Path) -> str:
96 def sanitize_output_file(text: Optional[str]) -> list[str]:
99 def sanitize_patch_file(text: Optional[str]) -> list[str]:
103 def rename_patch_file_target(text: str, new_path: Path) -> str:
/petsc/lib/petsc/bin/maint/
H A Dcheck_header_guard.py35 def _strip_empty_lines(self, idx: int, ret: list[str]) -> list[str]:
57 def prologue(self, ret: Sequence[str]) -> list[str]:
73 def replace(self, last_line: str, line: str, ret: list[str]) -> list[str]:
77 def epilogue(self, last_endif: int, ret: list[str]) -> list[str]:
95 def prologue(self, ret: list[str]) -> list[str]:
98 def replace(self, prev_line: str, line: str, ret: list[str]) -> list[str]:
141 def epilogue(self, last_endif: int, ret: list[str]) -> list[str]:
197 def prologue(self, ret: list[str]) -> list[str]:
200 def replace(self, prev_line: str, line: str, ret: list[str]) -> list[str]:
266 def epilogue(self, last_endif: int, ret: list[str]) -> list[str]:
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/petsc/lib/petsc/bin/maint/petsclinter/petsclinter/classes/
H A D_diag.py29 def _fuzzy_get_attribute(self, in_diags: dict[str, str], in_attr: str) -> tuple[bool, str]: argument
39 def __getattr__(self, attr: str) -> str:
65 def _sanitize_input(input_it: Iterable[str]) -> dict[str, str]:
72 def __getattr__(self, attr: str) -> str:
110 def update(self, obj: Any, other: Iterable[str], **kwargs) -> None:
141 def _expand_flag(flag: Union[Iterable[str], str]) -> str:
190 def check_flag(cls, flag: str) -> str:
214 def _inject_diag_map(cls, symbol: _T, diag_pairs: Iterable[tuple[str, str]]) -> _T: argument
269 def register(cls, *args: tuple[str, str]) -> Callable[[_T], _T]: argument
274 def __init__(self, flagprefix: str = '-f') -> None:
[all …]
H A D_pool.py75 …def _setup(self: PoolImpl, compiler_flags: list[str], clang_lib: PathLike, clang_options: CXTransl…
90 …def setup(self: PoolImpl, compiler_flags: list[str], clang_lib: Optional[PathLike] = None, clang_o…
122 …thLike], exclude_dirs: Optional[Collection[str]] = None, exclude_dir_suff: Optional[tuple[str, ...…
250 def __crash_and_burn(self, message: str) -> NoReturn:
310 …def _setup(self, compiler_flags: list[str], clang_lib: PathLike, clang_options: CXTranslationUnit,…
508 …def _setup(self, compiler_flags: list[str], clang_lib: PathLike, clang_options: CXTranslationUnit,…
H A D_path.py30 def append_suffix(self, suffix: str) -> Path:
49 def append_name(self, name: str) -> Path:
H A D_patch.py20 def __init__(self, value: str, extent: SourceRange, ctxlines: int) -> None:
50 def apply(self, src: str, offset: int) -> tuple[str, int]:
100 def __init__(self, src_range: SourceRangeLike, value: str, contextlines: int = 2) -> None:
122 def from_cursor(cls, cursor: CursorLike, value: str, **kwargs) -> Patch:
H A D_attr_cache.py21 def __init__(self, init_cache: Optional[dict[str, Any]] = None) -> None:
41 def _get_cached(self, attr: str, func: Callable[..., _T], *args, **kwargs) -> _T:
/petsc/src/binding/petsc4py/src/petsc4py/PETSc/
H A DOptions.pyx144 def hasName(self, name: str) -> bool:
153 def used(self, name: str) -> bool:
161 def setValue(self, name: str,
162 …value: bool | int | float | Scalar | Sequence[bool] | Sequence[int] | Sequence[float] | Sequence[S…
203 def delValue(self, name: str) -> None:
226 def getBool(self, name: str, default=None) -> bool:
246 def getBoolArray(self, name: str, default=None) -> ArrayBool:
266 def getInt(self, name: str, default=None) -> int:
286 def getIntArray(self, name: str, default=None) -> ArrayInt:
306 def getReal(self, name: str, default=None) -> float:
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H A DDMSwarm.pyx65 def createGlobalVectorFromField(self, fieldname: str) -> Vec:
89 def destroyGlobalVectorFromField(self, fieldname: str) -> None:
109 def createGlobalVectorFromFields(self, fieldnames: Sequence[str]) -> Vec:
139 def destroyGlobalVectorFromFields(self, fieldnames: Sequence[str]) -> None:
165 def createLocalVectorFromField(self, fieldname: str) -> Vec:
189 def destroyLocalVectorFromField(self, fieldname: str) -> None:
209 def createLocalVectorFromFields(self, fieldnames: Sequence[str]) -> Vec:
239 def destroyLocalVectorFromFields(self, fieldnames: Sequence[str]) -> None:
313 … def registerField(self, fieldname: str, blocksize: int, dtype: type | dtype = ScalarType) -> None:
343 def getField(self, fieldname: str) -> Sequence[int | float | complex]:
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H A DSys.pyx159 sep: str = ' ',
160 end: str = '\n',
201 sep: str = ' ',
202 end: str = '\n',
332 def pushErrorHandler(cls, errhandler: str) -> None:
397 mode: str = "w") -> None:
427 def registerCitation(cls, citation: str) -> None:
450 def hasExternalPackage(cls, package: str) -> bool:
H A DDMShell.pyx80 kargs: dict[str, Any] | None = None) -> None:
112 kargs: dict[str, Any] | None = None) -> None:
145 begin_kargs: dict[str, Any] | None = None,
147 end_kargs: dict[str, Any] | None = None) -> None:
211 begin_kargs: dict[str, Any] | None = None,
213 end_kargs: dict[str, Any] | None = None) -> None:
275 begin_kargs: dict[str, Any] | None = None,
277 end_kargs: dict[str, Any] | None = None) -> None:
340 kargs: dict[str, Any] | None = None) -> None:
372 kargs: dict[str, Any] | None = None) -> None:
[all …]
H A DViewer.pyx202 name: str,
240 name: str,
273 name: str,
310 name: str,
346 name: str,
430 def setType(self, vwr_type: Type | str) -> None:
605 def ASCII(cls, name : str, comm: Comm | None = None) -> Viewer:
779 def printfASCII(self, msg: str) -> None:
793 def printfASCIISynchronized(self, msg: str) -> None:
821 def setFileMode(self, mode: FileMode | str) -> None:
[all …]
H A DDM.pyx169 def setType(self, dm_type: DM.Type | str) -> None:
821 def setVecType(self, vec_type: Vec.Type | str) -> None:
1462 def setMatType(self, mat_type: Mat.Type | str) -> None:
1577 def convert(self, dm_type: DM.Type | str) -> DM:
1750 def adaptLabel(self, label: str) -> DM:
1809 def getLabel(self, name: str) -> DMLabel:
2006 def hasLabel(self, name: str) -> bool:
2027 def createLabel(self, name: str) -> None:
2046 def removeLabel(self, name: str) -> None:
2068 def getLabelValue(self, name: str, point: int) -> int:
[all …]
H A DTAO.pyx173 def setType(self, tao_type: Type | str) -> None:
309 …bjective: TAOObjectiveFunction, args: tuple[Any, ...] | None = None, kargs: dict[str, Any] | None …
334 …al: TAOResidualFunction, Vec R, args: tuple[Any, ...] | None = None, kargs: dict[str, Any] | None …
361 …nction, Mat J=None, Mat P=None, args: tuple[Any, ...] | None = None, kargs: dict[str, Any] | None …
394 …AOGradientFunction, Vec g=None, args: tuple[Any, ...] | None = None, kargs: dict[str, Any] | None …
452 …veGradientFunction, Vec g=None, args: tuple[Any, ...] | None = None, kargs: dict[str, Any] | None …
498 …c] | TAOVariableBoundsFunction, args: tuple[Any, ...] | None = None, kargs: dict[str, Any] | None …
534 …onstraintsFunction, Vec C=None, args: tuple[Any, ...] | None = None, kargs: dict[str, Any] | None …
564 … args: tuple[Any, ...] | None = None, kargs: dict[str, Any] | None = None) -> None:
617 … args: tuple[Any, ...] | None = None, kargs: dict[str, Any] | None = None) -> None:
[all …]
/petsc/doc/ext/
H A Dhtml5_petsc.py100 def _add_manpage_links(self, string: str) -> str:
196 def htmlmap_to_dict(htmlmap_filename: str) -> Dict[str,str]:
212 def dict_complete_links(string_to_link: Dict[str,str], prefix: str = '') -> Dict[str,str]: argument
216 def link_string(name: str, link: str, prefix: str) -> str:
/petsc/lib/petsc/bin/maint/petsclinter/petsclinter/classes/docs/
H A D_doc_str.py134 def __getattr__(self, attr: str) -> SectionBase:
188 def find(self, heading: str, cache_result: bool = True, strict: bool = False) -> SectionBase:
322 def is_heading(self, line: str, prev_line: str) -> Verdict:
337 def handle_header_with_colon(text: str) -> Verdict:
359 def handle_header_without_colon(line: str, prev_line: str) -> Verdict:
379 …def fuzzy_find_section(self, line: str, strict: bool = False, **kwargs) -> tuple[str, str, Section…
499 def _is_valid_docstring(cls, cursor: Cursor, raw: str, doc_extent: SourceRange) -> bool:
617 def str_remove_prefix(string: str, prefix: str) -> str:
664 def make_source_range(self, token: str, string: str, lineno: int, offset: int = 0) -> SourceRange:
693 …def make_diagnostic(self, kind: DiagnosticKind, diag_flag: str, msg: str, src_range: Optional[Unio…
[all …]
H A D_doc_section_base.py37 …def __init__(self, raw: str, prefixes: Optional[Sequence[str]] = None, expected_sep: str = '-') ->…
80 def split_param(text: str, prefixes: Sequence[str], sep: str) -> tuple[str, str, str]:
167 def __diagnostic_prefix__(cls, *flags: str) -> collections.deque[str]:
171 …def diagnostic_flag(cls, text: Union[str, collections.deque[str]], *, prefix: str = 'doc') -> coll…
227 …def __init__(self, name: str, required: bool = False, keywords: Optional[tuple[str, ...]] = None, …
316 …def consume(self, data: Collection[tuple[SourceRange, str, Verdict]]) -> list[tuple[SourceRange, s… argument
391 def transform(text: str) -> str:
464 …dings: Optional[Sequence[tuple[SourceRange, str, Verdict]]] = None, transform: Optional[Callable[[… argument
572 …string: PetscDocStringImpl, headings: Optional[Sequence[tuple[SourceRange, str, Verdict]]] = None)… argument
676 … def __call__(self, ds: PetscDocStringImpl, loc: SourceRange, line: str, verdict: Verdict) -> None:
[all …]
H A D_doc_section.py86 … def __call__(self, ds: PetscDocStringImpl, loc: SourceRange, line: str, verdict: Verdict) -> None:
327 … def __call__(self, ds: PetscDocStringImpl, loc: SourceRange, line: str, verdict: Verdict) -> None:
560 def mark_as_seen(self, name: str) -> int:
666 …ocStringImpl, arg_cursors: Sequence[Cursor], not_found: list[tuple[str, SourceRange]], args_left: …
1049 …lid_level_spelling(self, docstring: PetscDocStringImpl, loc: SourceRange, level_name: str) -> None:
1064 def make_sub_loc(loc: SourceRange, substr: str) -> SourceRange:
1221 def transform(text: str) -> str:
1225 def __make_deletion_patch(loc: SourceRange, text: str, look_behind: bool) -> Patch:
1301 …ial_chars(self, docstring: PetscDocStringImpl, item_remain: list[tuple[SourceRange, str]]) -> None: argument
1311 def enclosed_by(string: str, char: str) -> bool:
[all …]
/petsc/share/petsc/matlab/
H A DPetscReadBinaryMatlab.m26 str = str(1+matlabHeaderLen:end); variable
30 str = 'fd = PetscOpenFile(Set.filename);'; variable
32 str = '%'; variable
34 str = 'close(fd);'; variable
/petsc/lib/petsc/bin/maint/petsclinter/petsclinter/util/
H A D_utility.py190 def get_petsc_extra_includes(petsc_dir: Path, petsc_arch: str) -> list[str]:
220 def split_and_strip(line: str) -> list[str]:
231 def filter_flags(flags: list[str], keep_prefix: str) -> Iterable[str]:
262 def build_compiler_flags(petsc_dir: Path, petsc_arch: str, extra_compiler_flags: Optional[list[str]…
336 …def from_flags(cls, petsc_dir: Path, compiler_flags: list[str], extra_header_includes: Optional[li…
/petsc/lib/petsc/bin/maint/petsclinter/petsclinter/checks/
H A D_util.py38 …_fix_to_bad_source(linter: Linter, obj: Cursor, func_cursor: Cursor, valid_func_name: str) -> None:
106 …_not_type_y(type_x: str, type_y: str, linter: Linter, obj: Cursor, obj_type: clx.Type, func_cursor…
189 def check_is_not_type(typename: str, linter: Linter, obj: Cursor, func_cursor: Cursor, valid_func: …
256 …j: Cursor, obj_type: clx.Type, func_cursor: Optional[Cursor] = None, valid_func: str = '') -> bool:
374 def _do_check_traceable_to_parent_args(obj: Cursor, parent_arg_names: tuple[str, ...], trace: list[…
514 def check_traceable_to_parent_args(obj: Cursor, parent_arg_names: tuple[str, ...]) -> tuple[int, li…
H A D_register.py19 def filter_check_function_map(allowed_symbol_names: Collection[str]) -> None:
49 def register_classid(struct_name: str, classid_name: str, exist_ok: bool = False) -> None:
69 def register_symbol_check(name: str, function: FunctionChecker, exist_ok: bool = False) -> None:

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