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/petsc/doc/developers/contributing/
H A Dsubmittingmr.md6 Alternatively, use [GitLab's web interface](https://docs.gitlab.com/ee/user/project/merge_requests/…
8 - The default **target** branch is `main`; if your branch started from `release`, select that as th…
9 - If the merge request resolves an outstanding [issue](https://gitlab.com/petsc/petsc/issues),
10 …include a [closing pattern](https://docs.gitlab.com/ee/user/project/issues/managing_issues.html#de…
11 …cription to automatically have the issue closed when the MR is merged [^closing-patterns-release] .
15 - Select appropriate [labels](https://gitlab.com/petsc/petsc/-/labels) including a {any}`workflow l…
16 - Assign yourself to the MR.
17 - Select reviewers for the MR; clicking on `> Approval Rules` will list appropriate reviewers.
18 - If the branch started from `release` select the `milestone` of `Vxx.yy-release-fixes`
19 - For changes only to documentation, add the `docs-only` label, which will
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/petsc/
H A D.gitlab-ci.yml2 # stage-1 take only a few minutes; they do not run the full test suite or external packages.
4 # stage-2 runs on MCS systems and may take 10 to 15 minutes. They run the full test suite but with …
6 # stage-3 runs on MCS systems and may take an hour or more. They run the full test suite and heavil…
8 # The stage-(n) tests are only started if all of the stage-(n-1) tests run without error
13 - stage-1
14 - stage-2
15 - stage-3
16 - stage-4
19 GIT_CLEAN_FLAGS: -ffdxq
21 BASE_EXTRA_OPTIONS: -nox -nox_warning -malloc_dump
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/petsc/doc/faq/
H A Dindex.md22 …e: A Guide to Good Style](https://www.cambridge.org/core/books/writing-scientific-software/2320670…
32 - Fast, **low-latency** interconnect; any ethernet (even 10 GigE) simply cannot provide
34 - High per-core **memory** performance. Each core needs to
72 - [MPICH2 binding with the Hydra process manager](https://github.com/pmodels/mpich/blob/main/doc/wi…
75 $ mpiexec.hydra -n 4 --binding cpu:sockets
78 - [Open MPI binding](https://www.open-mpi.org/faq/?category=tuning#using-paffinity)
81 $ mpiexec -n 4 --map-by socket --bind-to socket --report-bindings
84 - `taskset`, part of the [util-linux](https://github.com/karelzak/util-linux) package
89 - `numactl`
97 The option `--localalloc` allocates memory on the local NUMA node, similar to the
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/petsc/doc/
H A Dpetsc.bib3 % bibtool petsc.bib -- expand.macros=on -- print.line.length=100 -- pass.comments=on
17 % LiteralHTML: <a name="nano"><H3><center>Nano-simulations</center></H3>
19 @Misc{ semver-webpage,
25 title = {{D}-stability and {K}aps-{R}entrop-methods},
30 pages = {229--237},
41 pages = {93--113},
55 …title = {Generalized {R}unge--{K}utta methods of order four with stepsize control for sti…
59 pages = {55--68},
73 …gorithm for Structural Dynamics With Improved Numerical Dissipation: The Generalized-alpha Method},
77 pages = {371-375},
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