Home
last modified time | relevance | path

Searched +full:petsc4py +full:- +full:pip (Results 1 – 16 of 16) sorted by relevance

/petsc/src/binding/petsc4py/docs/source/
H A Dinstall.rst6 Install from PyPI using **pip**
7 -------------------------------
9 You can use :program:`pip` to install :mod:`petsc4py` and its dependencies::
11 $ python -m pip install petsc petsc4py
14 ----------------------------------
20 $ python -m pip install src/binding/petsc4py
22 The installation of :mod:`petsc4py` supports multiple `PETSC_ARCH
25 $ PETSC_ARCH='arch-0:...:arch-N' python -m pip install src/binding/petsc4py
27 If you are cross-compiling, and the :mod:`numpy` module cannot be loaded on
28 your build host, then before invoking :program:`pip`, set the
[all …]
H A Dcontributing.rst8 New contributions to petsc4py **must** adhere with the coding standards.
9 We use cython-lint_ for Cython and ruff_ for Python source codes.
12 $ python -m pip install -r src/binding/petsc4py/conf/requirements-lint.txt
16 $ make cython-lint -C src/binding/petsc4py
20 $ make ruff-lint -C src/binding/petsc4py
22 Python code can be auto-formatted using::
24 $ make ruff-lint RUFF_OPTS='format' -C src/binding/petsc4py
26 New contributions to petsc4py must be tested.
27 Tests are located in the :file:`src/binding/petsc4py/test` folder.
29 pre-existing file according to the
[all …]
/petsc/src/binding/petsc4py/
H A Dmakefile1 -include ../../../petscdir.mk
4 default: opt=--inplace
6 package = petsc4py
12 # ----
21 test-%:
22 ${MPIEXEC} -n $* ${VALGRIND} ${PYTHON} ${PWD}/test/runtests.py ${opt}
28 -${RM} src/${package}/${MODULE}.c
29 -${RM} src/${package}/${MODULE}.h
30 -${RM} src/${package}/${MODULE}_api.h
34 ${PYTHON} setup.py clean --all
[all …]
H A DDESCRIPTION.rst7 -------
13 $ pip install mpi4py
17 $ pip install numpy
21 $ pip install petsc petsc4py
25 ---------
33 Advances in Water Resources, 34(9):1124-1139, 2011.
43 *PETSc/TAO Users Manual*, ANL-21/39 - Revision 3.24, 2025.
H A DCHANGES.rst12 - Update to PETSc 3.24 release.
14 - Support (opt-in via setting the environment variable
21 - Update to PETSc 3.23 release.
26 - Update to PETSc 3.22 release.
31 - Update to PETSc 3.21 release.
36 - Update to PETSc 3.20 release.
37 - Update Cython build, require ``Cython >= 3.0.0``.
42 - Update to PETSc 3.19 release.
43 - Expose ``PetscDevice`` and ``PetscDeviceContext`` API as
49 - Update to PETSc 3.18 release.
[all …]
/petsc/config/BuildSystem/config/packages/
H A Dpetsc4py.py17 …help.addArgument('PETSc', '-with-petsc4py=<bool>', nargs.ArgBool(None, False, 'Build PETSc Python …
18 ….addArgument('PETSc', '-with-petsc4py-test-np=<np>',nargs.ArgInt(None, None, min=1, help='Number o…
19 …help.addArgument('PETSc', '-with-numpy-include=<dir>', nargs.Arg(None, None, 'Path to numpy header…
24 s = 'petsc4py:\n'
44 return os.path.join('src','binding','petsc4py')
58 archflags = "ARCHFLAGS=\'-arch arm64\' "
59 elif self.types.sizes['void-p'] == 4:
60 archflags = "ARCHFLAGS=\'-arch i386\' "
62 archflags = "ARCHFLAGS=\'-arch x86_64\' "
65 # if DESTDIR is non-empty, then PETSc has been installed into staging dir
[all …]
H A DFEniCS-DOLFINx.py24 self.petsc4py = framework.require('config.packages.petsc4py',self)
26 self.basix = framework.require('config.packages.fenics-basix',self)
38 …self.deps = [self.mpi4py,self.petsc4py,self.boost,self.basix,self.ffcx,self.hdf5,self…
44 args.append('-DDOLFINX_ENABLE_PETSC=ON')
45 args.append('-DDOLFINX_ENABLE_SLEPC=ON')
46 args.append('-DHDF5_DIR=' + self.hdf5.include[0])
48 args.append('-DDOLFINX_ENABLE_PARMETIS=ON')
50 args.append('-DDOLFINX_ENABLE_SCOTCH=ON')
52 …ror('PETSc must provide either ParMETIS or PTSCOTCH, suggest --download-parmetis --download-metis')
60 …raise RuntimeError("FEniCS-DOLFINx requires HDF5 with C++ bindings, ensure you use --with-hdf5-cxx…
[all …]
/petsc/
H A D.gitlab-ci.yml2 # stage-1 take only a few minutes; they do not run the full test suite or external packages.
4 # stage-2 runs on MCS systems and may take 10 to 15 minutes. They run the full test suite but with …
6 # stage-3 runs on MCS systems and may take an hour or more. They run the full test suite and heavil…
8 # The stage-(n) tests are only started if all of the stage-(n-1) tests run without error
13 - stage-1
14 - stage-2
15 - stage-3
16 - stage-4
19 GIT_CLEAN_FLAGS: -ffdxq
21 BASE_EXTRA_OPTIONS: -nox -nox_warning -malloc_dump
[all …]
H A Dsetup.py11 all message-passing communication.
15 To install the ``PETSc`` and ``petsc4py`` packages use::
17 $ python -m pip install numpy
18 $ python -m pip install petsc petsc4py
22 You can also install the in-development versions with::
24 $ python -m pip install cython numpy
25 … $ python -m pip install --no-deps https://gitlab.com/petsc/petsc/-/archive/main/petsc-main.tar.gz
29 …t use the ``PETSc`` ``./configure`` options ``--with-cc``, ``--with-cxx``, ``--with-fc``, or ``--w…
50 # Contact: petsc-maint@mcs.anl.gov
65 # Contact: petsc-maint@mcs.anl.gov
[all …]
H A Dmakefile5 # * make help - useful messages on functionality
6 # * make all - compile the PETSc libraries and utilities, run after ./configure
7 # * make check - runs a quick test that the libraries are built correctly and PETSc applications …
9 # * make install - for use with ./configure is run with the --prefix=directory option
10 # * make test - runs a comprehensive test suite (requires gnumake)
11 # * make docs - build the entire PETSc website of documentation (locally)
15 # gmakefile - manages the compiling PETSc in parallel
16 # gmakefile.test - manages running the comprehensive test suite
32 OMAKE_SELF = $(OMAKE) -f makefile
33 OMAKE_SELF_PRINTDIR = $(OMAKE_PRINTDIR) -f makefile
[all …]
/petsc/lib/petsc/bin/maint/
H A Dbuilddist1 #!/bin/bash -ex
5 # Usage: builddist petscrepo [branch/commit] [version-suffix]
9 # when version-suffix="SETVERSION", obtain it from include/petscversion.h
12 # builddist /sandbox/petsc/petsc.clone balay/foo [creates petsc-HASH.tar.gz]
13 # builddist /sandbox/petsc/petsc.clone main ver-suffix [creates petsc-ver-suffix.tar.gz]
14 # builddist /sandbox/petsc/petsc.clone release SETVERSION [creates petsc-3.24.5.tar.gz]
18 # ignore command line options in CI mode - and build tarball from current state setup by CI
19 if [ ! -z "${CI_PIPELINE_ID+x}" ]; then
20 petscrepo=`pwd -P`
24 version=-$3
[all …]
/petsc/doc/install/
H A Dindex.md12 - Archlinux <https://aur.archlinux.org/packages/petsc>
13 - Conda: <https://anaconda.org/conda-forge/petsc>
14 : `conda install -c conda-forge petsc`
15 - Debian: <https://packages.debian.org/petsc-dev>
16 : `sudo apt install petsc-dev`
17 - E4S: <https://e4s.io/download.html>
18 - Fedora: <https://packages.fedoraproject.org/pkgs/petsc/petsc>
19 : `sudo yum install petsc-mpich-devel`
20 - Homebrew: <https://formulae.brew.sh/formula/petsc>
22 - MacPorts: <https://ports.macports.org/port/petsc>
[all …]
/petsc/doc/changes/
H A D324.md12 - Add `PETSCPYTHONPATH` to the generated `$PETSC_DIR/$PETSC_ARCH/lib/petsc/conf/petscvariables` fil…
13 - Add `PETSCPYTHONPATH` to the generated `$PETSC_DIR/$PETSC_ARCH/lib/pkgconfig/PETSc.pc` file so it…
14 …`PKG_CONFIG_PATH=$PETSC_DIR/$PETSC_ARCH/lib/pkgconfig pkg-config --variable=PETSCPYTHONPATH PETSc.…
15 - Add `EXTRA_OPTIONS_INITIAL` to the test system, which prepends options
20 - Change `make sphinxhtml` in the `doc` directory to be `make docs`
21 - Change `make docs` to put all its artifacts in `${PETSC_ARCH}-doc` instead of `doc`
22 - Add support for `--download-xxx`, `--with-xxx`, and `-with-xxx-dir` for Python packages that inst…
23 - Change `make alletags` to `make etags`
24 - Deactivate Fortran bindings of SuperLU_DIST and ExodusII by default, but they can still be built …
25 - Add `--with-python-exec-from-env=python` to allow providing the Python to be used by mpi4py and p…
[all …]
/petsc/src/snes/tutorials/
H A Dex34.c11 To visualize the solution, configure with petsc4py, pip install pyvista, and use
13 -potential_view pyvista -view_pyvista_warp 1.
17 -snes_convergence_estimate -convest_num_refine 2 -convest_monitor -convest_error_view pyvista
21 -snes_vi_monitor_residual pyvista -snes_vi_monitor_active pyvista
25 -snes_vi_monitor -snes_converged_reason -convest_monitor
57 const PetscReal r_0 = par->r_0; in obstacle_ball()
59 const PetscReal psi_0 = PetscSqrtReal(1. - PetscSqr(r_0)); in obstacle_ball()
60 const PetscReal dpsi_0 = -r_0 / psi_0; in obstacle_ball()
64 if (r < r_0) u[0] = PetscSqrtReal(1.0 - PetscSqr(r)); in obstacle_ball()
65 else u[0] = psi_0 + dpsi_0 * (r - r_0); in obstacle_ball()
[all …]
/petsc/lib/petsc/conf/
H A Drules_util.mk1 # -*- mode: makefile-gmake -*-
10 -@${PETSC_DIR}/lib/petsc/bin/petscversion
13 -@echo ${MPI_LIB}
16 -@echo ${MPI_INCLUDE}
19 -@echo ${MPIEXEC}
22 -@echo ${CC}
25 -@echo ${FC}
28 -@echo ${CXX}
31 -@echo ${C_SH_LIB_PATH} ${PETSC_TS_LIB}
34 -@echo ${PETSC_CC_INCLUDES}
[all …]
/petsc/doc/
H A Dpetsc.bib3 % bibtool petsc.bib -- expand.macros=on -- print.line.length=100 -- pass.comments=on
17 % LiteralHTML: <a name="nano"><H3><center>Nano-simulations</center></H3>
19 @Misc{ semver-webpage,
25 title = {{D}-stability and {K}aps-{R}entrop-methods},
30 pages = {229--237},
41 pages = {93--113},
55 …title = {Generalized {R}unge--{K}utta methods of order four with stepsize control for sti…
59 pages = {55--68},
73 …gorithm for Structural Dynamics With Improved Numerical Dissipation: The Generalized-alpha Method},
77 pages = {371-375},
[all …]