xref: /petsc/src/ksp/pc/impls/is/nn/nn.c (revision 07096847e834a96a7931f57b99070e602a3a6b18)
1 #include <../src/ksp/pc/impls/is/nn/nn.h>
2 
3 /*
4    PCSetUp_NN - Prepares for the use of the NN preconditioner
5                     by setting data structures and options.
6 
7    Input Parameter:
8 .  pc - the preconditioner context
9 
10    Application Interface Routine: PCSetUp()
11 
12    Note:
13    The interface routine PCSetUp() is not usually called directly by
14    the user, but instead is called by PCApply() if necessary.
15 */
PCSetUp_NN(PC pc)16 static PetscErrorCode PCSetUp_NN(PC pc)
17 {
18   PetscFunctionBegin;
19   if (!pc->setupcalled) {
20     /* Set up all the "iterative substructuring" common block */
21     PetscCall(PCISSetUp(pc, PETSC_TRUE, PETSC_TRUE));
22     /* Create the coarse matrix. */
23     PetscCall(PCNNCreateCoarseMatrix(pc));
24   }
25   PetscFunctionReturn(PETSC_SUCCESS);
26 }
27 
28 /*
29    PCApply_NN - Applies the NN preconditioner to a vector.
30 
31    Input Parameters:
32 +  pc - the preconditioner context
33 -  r - input vector (global)
34 
35    Output Parameter:
36 .  z - output vector (global)
37 
38    Application Interface Routine: PCApply()
39  */
PCApply_NN(PC pc,Vec r,Vec z)40 static PetscErrorCode PCApply_NN(PC pc, Vec r, Vec z)
41 {
42   PC_IS      *pcis  = (PC_IS *)pc->data;
43   PetscScalar m_one = -1.0;
44   Vec         w     = pcis->vec1_global;
45 
46   PetscFunctionBegin;
47   /*
48     Dirichlet solvers.
49     Solving $ B_I^{(i)}r_I^{(i)} $ at each processor.
50     Storing the local results at vec2_D
51   */
52   PetscCall(VecScatterBegin(pcis->global_to_D, r, pcis->vec1_D, INSERT_VALUES, SCATTER_FORWARD));
53   PetscCall(VecScatterEnd(pcis->global_to_D, r, pcis->vec1_D, INSERT_VALUES, SCATTER_FORWARD));
54   PetscCall(KSPSolve(pcis->ksp_D, pcis->vec1_D, pcis->vec2_D));
55 
56   /*
57     Computing $ r_B - \sum_j \tilde R_j^T A_{BI}^{(j)} (B_I^{(j)}r_I^{(j)}) $ .
58     Storing the result in the interface portion of the global vector w.
59   */
60   PetscCall(MatMult(pcis->A_BI, pcis->vec2_D, pcis->vec1_B));
61   PetscCall(VecScale(pcis->vec1_B, m_one));
62   PetscCall(VecCopy(r, w));
63   PetscCall(VecScatterBegin(pcis->global_to_B, pcis->vec1_B, w, ADD_VALUES, SCATTER_REVERSE));
64   PetscCall(VecScatterEnd(pcis->global_to_B, pcis->vec1_B, w, ADD_VALUES, SCATTER_REVERSE));
65 
66   /*
67     Apply the interface preconditioner
68   */
69   PetscCall(PCNNApplyInterfacePreconditioner(pc, w, z, pcis->work_N, pcis->vec1_B, pcis->vec2_B, pcis->vec3_B, pcis->vec1_D, pcis->vec3_D, pcis->vec1_N, pcis->vec2_N));
70 
71   /*
72     Computing $ t_I^{(i)} = A_{IB}^{(i)} \tilde R_i z_B $
73     The result is stored in vec1_D.
74   */
75   PetscCall(VecScatterBegin(pcis->global_to_B, z, pcis->vec1_B, INSERT_VALUES, SCATTER_FORWARD));
76   PetscCall(VecScatterEnd(pcis->global_to_B, z, pcis->vec1_B, INSERT_VALUES, SCATTER_FORWARD));
77   PetscCall(MatMult(pcis->A_IB, pcis->vec1_B, pcis->vec1_D));
78 
79   /*
80     Dirichlet solvers.
81     Computing $ B_I^{(i)}t_I^{(i)} $ and sticking into the global vector the blocks
82     $ B_I^{(i)}r_I^{(i)} - B_I^{(i)}t_I^{(i)} $.
83   */
84   PetscCall(VecScatterBegin(pcis->global_to_D, pcis->vec2_D, z, INSERT_VALUES, SCATTER_REVERSE));
85   PetscCall(VecScatterEnd(pcis->global_to_D, pcis->vec2_D, z, INSERT_VALUES, SCATTER_REVERSE));
86   PetscCall(KSPSolve(pcis->ksp_D, pcis->vec1_D, pcis->vec2_D));
87   PetscCall(VecScale(pcis->vec2_D, m_one));
88   PetscCall(VecScatterBegin(pcis->global_to_D, pcis->vec2_D, z, ADD_VALUES, SCATTER_REVERSE));
89   PetscCall(VecScatterEnd(pcis->global_to_D, pcis->vec2_D, z, ADD_VALUES, SCATTER_REVERSE));
90   PetscFunctionReturn(PETSC_SUCCESS);
91 }
92 
93 /*
94    PCDestroy_NN - Destroys the private context for the NN preconditioner
95    that was created with PCCreate_NN().
96 
97    Input Parameter:
98 .  pc - the preconditioner context
99 
100    Application Interface Routine: PCDestroy()
101 */
PCDestroy_NN(PC pc)102 static PetscErrorCode PCDestroy_NN(PC pc)
103 {
104   PC_NN *pcnn = (PC_NN *)pc->data;
105 
106   PetscFunctionBegin;
107   PetscCall(PCISReset(pc));
108 
109   PetscCall(MatDestroy(&pcnn->coarse_mat));
110   PetscCall(VecDestroy(&pcnn->coarse_x));
111   PetscCall(VecDestroy(&pcnn->coarse_b));
112   PetscCall(KSPDestroy(&pcnn->ksp_coarse));
113   if (pcnn->DZ_IN) {
114     PetscCall(PetscFree(pcnn->DZ_IN[0]));
115     PetscCall(PetscFree(pcnn->DZ_IN));
116   }
117 
118   /*
119       Free the private data structure that was hanging off the PC
120   */
121   PetscCall(PetscFree(pc->data));
122   PetscFunctionReturn(PETSC_SUCCESS);
123 }
124 
125 /*MC
126    PCNN - Balancing Neumann-Neumann for scalar elliptic PDEs.
127 
128    Options Database Keys:
129 +    -pc_nn_turn_off_first_balancing - do not balance the residual before solving the local Neumann problems
130                                        (this skips the first coarse grid solve in the preconditioner)
131 .    -pc_nn_turn_off_second_balancing - do not balance the solution solving the local Neumann problems
132                                        (this skips the second coarse grid solve in the preconditioner)
133 .    -pc_is_damp_fixed <fact> -
134 .    -pc_is_remove_nullspace_fixed -
135 .    -pc_is_set_damping_factor_floating <fact> -
136 .    -pc_is_not_damp_floating -
137 -    -pc_is_not_remove_nullspace_floating -
138 
139    Options Database prefixes for the subsolvers this preconditioner uses:
140 +  -nn_coarse_pc_ - for the coarse grid preconditioner
141 .  -is_localD_pc_ - for the Dirichlet subproblem preconditioner
142 -  -is_localN_pc_ - for the Neumann subproblem preconditioner
143 
144    Level: intermediate
145 
146    Notes:
147    The matrix used with this preconditioner must be of type `MATIS`
148 
149    Unlike more 'conventional' Neumann-Neumann preconditioners this iterates over ALL the
150    degrees of freedom, NOT just those on the interface (this allows the use of approximate solvers
151    on the subdomains; though in our experience using approximate solvers is slower.).
152 
153    Contributed by Paulo Goldfeld
154 
155 .seealso: [](ch_ksp), `PCCreate()`, `PCSetType()`, `PCType`, `PC`, `MATIS`, `PCBDDC`
156 M*/
157 
PCCreate_NN(PC pc)158 PETSC_EXTERN PetscErrorCode PCCreate_NN(PC pc)
159 {
160   PC_NN *pcnn;
161 
162   PetscFunctionBegin;
163   /*
164      Creates the private data structure for this preconditioner and
165      attach it to the PC object.
166   */
167   PetscCall(PetscNew(&pcnn));
168   pc->data = (void *)pcnn;
169 
170   PetscCall(PCISInitialize(pc));
171   pcnn->coarse_mat = NULL;
172   pcnn->coarse_x   = NULL;
173   pcnn->coarse_b   = NULL;
174   pcnn->ksp_coarse = NULL;
175   pcnn->DZ_IN      = NULL;
176 
177   /*
178       Set the pointers for the functions that are provided above.
179       Now when the user-level routines (such as PCApply(), PCDestroy(), etc.)
180       are called, they will automatically call these functions.  Note we
181       choose not to provide a couple of these functions since they are
182       not needed.
183   */
184   pc->ops->apply               = PCApply_NN;
185   pc->ops->applytranspose      = NULL;
186   pc->ops->setup               = PCSetUp_NN;
187   pc->ops->destroy             = PCDestroy_NN;
188   pc->ops->view                = NULL;
189   pc->ops->applyrichardson     = NULL;
190   pc->ops->applysymmetricleft  = NULL;
191   pc->ops->applysymmetricright = NULL;
192   PetscFunctionReturn(PETSC_SUCCESS);
193 }
194 
195 /*
196    PCNNCreateCoarseMatrix -
197 */
PCNNCreateCoarseMatrix(PC pc)198 PetscErrorCode PCNNCreateCoarseMatrix(PC pc)
199 {
200   MPI_Request  *send_request, *recv_request;
201   PetscInt      i, j, k;
202   PetscScalar  *mat;    /* Sub-matrix with this subdomain's contribution to the coarse matrix             */
203   PetscScalar **DZ_OUT; /* proc[k].DZ_OUT[i][] = bit of vector to be sent from processor k to processor i */
204 
205   PC_IS        *pcis     = (PC_IS *)pc->data;
206   PC_NN        *pcnn     = (PC_NN *)pc->data;
207   PetscInt     *neigh    = pcis->neigh;
208   PetscInt     *n_shared = pcis->n_shared;
209   PetscInt    **shared   = pcis->shared;
210   PetscMPIInt   n_neigh;
211   PetscScalar **DZ_IN; /* Must be initialized after memory allocation. */
212 
213   PetscFunctionBegin;
214   PetscCall(PetscMPIIntCast(pcis->n_neigh, &n_neigh));
215   /* Allocate memory for mat (the +1 is to handle the case n_neigh equal to zero) */
216   PetscCall(PetscMalloc1(n_neigh * n_neigh + 1, &mat));
217 
218   /* Allocate memory for DZ */
219   /* Notice that DZ_OUT[0] is allocated some space that is never used. */
220   /* This is just in order to DZ_OUT and DZ_IN to have exactly the same form. */
221   {
222     PetscInt size_of_Z = 0;
223     PetscCall(PetscMalloc((n_neigh + 1) * sizeof(PetscScalar *), &pcnn->DZ_IN));
224     DZ_IN = pcnn->DZ_IN;
225     PetscCall(PetscMalloc((n_neigh + 1) * sizeof(PetscScalar *), &DZ_OUT));
226     for (i = 0; i < n_neigh; i++) size_of_Z += n_shared[i];
227     PetscCall(PetscMalloc((size_of_Z + 1) * sizeof(PetscScalar), &DZ_IN[0]));
228     PetscCall(PetscMalloc((size_of_Z + 1) * sizeof(PetscScalar), &DZ_OUT[0]));
229   }
230   for (i = 1; i < n_neigh; i++) {
231     DZ_IN[i]  = DZ_IN[i - 1] + n_shared[i - 1];
232     DZ_OUT[i] = DZ_OUT[i - 1] + n_shared[i - 1];
233   }
234 
235   /* Set the values of DZ_OUT, in order to send this info to the neighbours */
236   /* First, set the auxiliary array pcis->work_N. */
237   PetscCall(PCISScatterArrayNToVecB(pc, pcis->work_N, pcis->D, INSERT_VALUES, SCATTER_REVERSE));
238   for (i = 1; i < n_neigh; i++) {
239     for (j = 0; j < n_shared[i]; j++) DZ_OUT[i][j] = pcis->work_N[shared[i][j]];
240   }
241 
242   /* Non-blocking send/receive the common-interface chunks of scaled nullspaces */
243   /* Notice that send_request[] and recv_request[] could have one less element. */
244   /* We make them longer to have request[i] corresponding to neigh[i].          */
245   {
246     PetscMPIInt tag;
247     PetscCall(PetscObjectGetNewTag((PetscObject)pc, &tag));
248     PetscCall(PetscMalloc2(n_neigh + 1, &send_request, n_neigh + 1, &recv_request));
249     for (i = 1; i < n_neigh; i++) {
250       PetscMPIInt nn;
251 
252       PetscCall(PetscMPIIntCast(neigh[i], &nn));
253       PetscCallMPI(MPIU_Isend(DZ_OUT[i], n_shared[i], MPIU_SCALAR, nn, tag, PetscObjectComm((PetscObject)pc), &send_request[i]));
254       PetscCallMPI(MPIU_Irecv(DZ_IN[i], n_shared[i], MPIU_SCALAR, nn, tag, PetscObjectComm((PetscObject)pc), &recv_request[i]));
255     }
256   }
257 
258   /* Set DZ_IN[0][] (recall that neigh[0]==rank, always) */
259   for (j = 0; j < n_shared[0]; j++) DZ_IN[0][j] = pcis->work_N[shared[0][j]];
260 
261   /* Start computing with local D*Z while communication goes on.    */
262   /* Apply Schur complement. The result is "stored" in vec (more    */
263   /* precisely, vec points to the result, stored in pc_nn->vec1_B)  */
264   /* and also scattered to pcnn->work_N.                            */
265   PetscCall(PCNNApplySchurToChunk(pc, n_shared[0], shared[0], DZ_IN[0], pcis->work_N, pcis->vec1_B, pcis->vec2_B, pcis->vec1_D, pcis->vec2_D));
266 
267   /* Compute the first column, while completing the receiving. */
268   for (i = 0; i < n_neigh; i++) {
269     MPI_Status  stat;
270     PetscMPIInt ind = 0;
271     if (i > 0) {
272       PetscCallMPI(MPI_Waitany(n_neigh - 1, recv_request + 1, &ind, &stat));
273       ind++;
274     }
275     mat[ind * n_neigh + 0] = 0.0;
276     for (k = 0; k < n_shared[ind]; k++) mat[ind * n_neigh + 0] += DZ_IN[ind][k] * pcis->work_N[shared[ind][k]];
277   }
278 
279   /* Compute the remaining of the columns */
280   for (j = 1; j < n_neigh; j++) {
281     PetscCall(PCNNApplySchurToChunk(pc, n_shared[j], shared[j], DZ_IN[j], pcis->work_N, pcis->vec1_B, pcis->vec2_B, pcis->vec1_D, pcis->vec2_D));
282     for (i = 0; i < n_neigh; i++) {
283       mat[i * n_neigh + j] = 0.0;
284       for (k = 0; k < n_shared[i]; k++) mat[i * n_neigh + j] += DZ_IN[i][k] * pcis->work_N[shared[i][k]];
285     }
286   }
287 
288   /* Complete the sending. */
289   if (n_neigh > 1) {
290     MPI_Status *stat;
291     PetscCall(PetscMalloc1(n_neigh - 1, &stat));
292     if (n_neigh - 1) PetscCallMPI(MPI_Waitall(n_neigh - 1, &send_request[1], stat));
293     PetscCall(PetscFree(stat));
294   }
295 
296   /* Free the memory for the MPI requests */
297   PetscCall(PetscFree2(send_request, recv_request));
298 
299   /* Free the memory for DZ_OUT */
300   if (DZ_OUT) {
301     PetscCall(PetscFree(DZ_OUT[0]));
302     PetscCall(PetscFree(DZ_OUT));
303   }
304 
305   {
306     PetscMPIInt size;
307     PetscCallMPI(MPI_Comm_size(PetscObjectComm((PetscObject)pc), &size));
308     /* Create the global coarse vectors (rhs and solution). */
309     PetscCall(VecCreateMPI(PetscObjectComm((PetscObject)pc), 1, size, &pcnn->coarse_b));
310     PetscCall(VecDuplicate(pcnn->coarse_b, &pcnn->coarse_x));
311     /* Create and set the global coarse AIJ matrix. */
312     PetscCall(MatCreate(PetscObjectComm((PetscObject)pc), &pcnn->coarse_mat));
313     PetscCall(MatSetSizes(pcnn->coarse_mat, 1, 1, size, size));
314     PetscCall(MatSetType(pcnn->coarse_mat, MATAIJ));
315     PetscCall(MatSeqAIJSetPreallocation(pcnn->coarse_mat, 1, NULL));
316     PetscCall(MatMPIAIJSetPreallocation(pcnn->coarse_mat, 1, NULL, n_neigh, NULL));
317     PetscCall(MatSetOption(pcnn->coarse_mat, MAT_NEW_NONZERO_ALLOCATION_ERR, PETSC_FALSE));
318     PetscCall(MatSetOption(pcnn->coarse_mat, MAT_NEW_NONZERO_LOCATION_ERR, PETSC_FALSE));
319     PetscCall(MatSetValues(pcnn->coarse_mat, n_neigh, neigh, n_neigh, neigh, mat, ADD_VALUES));
320     PetscCall(MatAssemblyBegin(pcnn->coarse_mat, MAT_FINAL_ASSEMBLY));
321     PetscCall(MatAssemblyEnd(pcnn->coarse_mat, MAT_FINAL_ASSEMBLY));
322   }
323 
324   {
325     PetscMPIInt rank;
326     PetscScalar one = 1.0;
327     PetscCallMPI(MPI_Comm_rank(PetscObjectComm((PetscObject)pc), &rank));
328     /* "Zero out" rows of not-purely-Neumann subdomains */
329     if (pcis->pure_neumann) { /* does NOT zero the row; create an empty index set. The reason is that MatZeroRows() is collective. */
330       PetscCall(MatZeroRows(pcnn->coarse_mat, 0, NULL, one, NULL, NULL));
331     } else { /* here it DOES zero the row, since it's not a floating subdomain. */
332       PetscInt row = rank;
333       PetscCall(MatZeroRows(pcnn->coarse_mat, 1, &row, one, NULL, NULL));
334     }
335   }
336 
337   /* Create the coarse linear solver context */
338   {
339     PC  pc_ctx, inner_pc;
340     KSP inner_ksp;
341 
342     PetscCall(KSPCreate(PetscObjectComm((PetscObject)pc), &pcnn->ksp_coarse));
343     PetscCall(KSPSetNestLevel(pcnn->ksp_coarse, pc->kspnestlevel));
344     PetscCall(PetscObjectIncrementTabLevel((PetscObject)pcnn->ksp_coarse, (PetscObject)pc, 2));
345     PetscCall(KSPSetOperators(pcnn->ksp_coarse, pcnn->coarse_mat, pcnn->coarse_mat));
346     PetscCall(KSPGetPC(pcnn->ksp_coarse, &pc_ctx));
347     PetscCall(PCSetType(pc_ctx, PCREDUNDANT));
348     PetscCall(KSPSetType(pcnn->ksp_coarse, KSPPREONLY));
349     PetscCall(PCRedundantGetKSP(pc_ctx, &inner_ksp));
350     PetscCall(KSPGetPC(inner_ksp, &inner_pc));
351     PetscCall(PCSetType(inner_pc, PCLU));
352     PetscCall(KSPSetOptionsPrefix(pcnn->ksp_coarse, "nn_coarse_"));
353     PetscCall(KSPSetFromOptions(pcnn->ksp_coarse));
354     /* the vectors in the following line are dummy arguments, just telling the KSP the vector size. Values are not used */
355     PetscCall(KSPSetUp(pcnn->ksp_coarse));
356   }
357 
358   /* Free the memory for mat */
359   PetscCall(PetscFree(mat));
360 
361   /* for DEBUGGING, save the coarse matrix to a file. */
362   {
363     PetscBool flg = PETSC_FALSE;
364     PetscCall(PetscOptionsGetBool(NULL, NULL, "-pc_nn_save_coarse_matrix", &flg, NULL));
365     if (flg) {
366       PetscViewer viewer;
367       PetscCall(PetscViewerASCIIOpen(PETSC_COMM_WORLD, "coarse.m", &viewer));
368       PetscCall(PetscViewerPushFormat(viewer, PETSC_VIEWER_ASCII_MATLAB));
369       PetscCall(MatView(pcnn->coarse_mat, viewer));
370       PetscCall(PetscViewerPopFormat(viewer));
371       PetscCall(PetscViewerDestroy(&viewer));
372     }
373   }
374 
375   /*  Set the variable pcnn->factor_coarse_rhs. */
376   pcnn->factor_coarse_rhs = (pcis->pure_neumann) ? 1.0 : 0.0;
377 
378   /* See historical note 02, at the bottom of this file. */
379   PetscFunctionReturn(PETSC_SUCCESS);
380 }
381 
382 /*
383    PCNNApplySchurToChunk -
384 
385    Input parameters:
386 .  pcnn
387 .  n - size of chunk
388 .  idx - indices of chunk
389 .  chunk - values
390 
391    Output parameters:
392 .  array_N - result of Schur complement applied to chunk, scattered to big array
393 .  vec1_B  - result of Schur complement applied to chunk
394 .  vec2_B  - garbage (used as work space)
395 .  vec1_D  - garbage (used as work space)
396 .  vec2_D  - garbage (used as work space)
397 
398 */
PCNNApplySchurToChunk(PC pc,PetscInt n,PetscInt * idx,PetscScalar * chunk,PetscScalar * array_N,Vec vec1_B,Vec vec2_B,Vec vec1_D,Vec vec2_D)399 PetscErrorCode PCNNApplySchurToChunk(PC pc, PetscInt n, PetscInt *idx, PetscScalar *chunk, PetscScalar *array_N, Vec vec1_B, Vec vec2_B, Vec vec1_D, Vec vec2_D)
400 {
401   PetscInt i;
402   PC_IS   *pcis = (PC_IS *)pc->data;
403 
404   PetscFunctionBegin;
405   PetscCall(PetscArrayzero(array_N, pcis->n));
406   for (i = 0; i < n; i++) array_N[idx[i]] = chunk[i];
407   PetscCall(PCISScatterArrayNToVecB(pc, array_N, vec2_B, INSERT_VALUES, SCATTER_FORWARD));
408   PetscCall(PCISApplySchur(pc, vec2_B, vec1_B, (Vec)0, vec1_D, vec2_D));
409   PetscCall(PCISScatterArrayNToVecB(pc, array_N, vec1_B, INSERT_VALUES, SCATTER_REVERSE));
410   PetscFunctionReturn(PETSC_SUCCESS);
411 }
412 
413 /*
414    PCNNApplyInterfacePreconditioner - Apply the interface preconditioner, i.e.,
415                                       the preconditioner for the Schur complement.
416 
417    Input parameter:
418 .  r - global vector of interior and interface nodes. The values on the interior nodes are NOT used.
419 
420    Output parameters:
421 .  z - global vector of interior and interface nodes. The values on the interface are the result of
422        the application of the interface preconditioner to the interface part of r. The values on the
423        interior nodes are garbage.
424 .  work_N - array of local nodes (interior and interface, including ghosts); returns garbage (used as work space)
425 .  vec1_B - vector of local interface nodes (including ghosts); returns garbage (used as work space)
426 .  vec2_B - vector of local interface nodes (including ghosts); returns garbage (used as work space)
427 .  vec3_B - vector of local interface nodes (including ghosts); returns garbage (used as work space)
428 .  vec1_D - vector of local interior nodes; returns garbage (used as work space)
429 .  vec2_D - vector of local interior nodes; returns garbage (used as work space)
430 .  vec1_N - vector of local nodes (interior and interface, including ghosts); returns garbage (used as work space)
431 .  vec2_N - vector of local nodes (interior and interface, including ghosts); returns garbage (used as work space)
432 
433 */
PCNNApplyInterfacePreconditioner(PC pc,Vec r,Vec z,PetscScalar * work_N,Vec vec1_B,Vec vec2_B,Vec vec3_B,Vec vec1_D,Vec vec2_D,Vec vec1_N,Vec vec2_N)434 PetscErrorCode PCNNApplyInterfacePreconditioner(PC pc, Vec r, Vec z, PetscScalar *work_N, Vec vec1_B, Vec vec2_B, Vec vec3_B, Vec vec1_D, Vec vec2_D, Vec vec1_N, Vec vec2_N)
435 {
436   PC_IS *pcis = (PC_IS *)pc->data;
437 
438   PetscFunctionBegin;
439   /*
440     First balancing step.
441   */
442   {
443     PetscBool flg = PETSC_FALSE;
444     PetscCall(PetscOptionsGetBool(NULL, NULL, "-pc_nn_turn_off_first_balancing", &flg, NULL));
445     if (!flg) {
446       PetscCall(PCNNBalancing(pc, r, (Vec)0, z, vec1_B, vec2_B, (Vec)0, vec1_D, vec2_D, work_N));
447     } else {
448       PetscCall(VecCopy(r, z));
449     }
450   }
451 
452   /*
453     Extract the local interface part of z and scale it by D
454   */
455   PetscCall(VecScatterBegin(pcis->global_to_B, z, vec1_B, INSERT_VALUES, SCATTER_FORWARD));
456   PetscCall(VecScatterEnd(pcis->global_to_B, z, vec1_B, INSERT_VALUES, SCATTER_FORWARD));
457   PetscCall(VecPointwiseMult(vec2_B, pcis->D, vec1_B));
458 
459   /* Neumann Solver */
460   PetscCall(PCISApplyInvSchur(pc, vec2_B, vec1_B, vec1_N, vec2_N));
461 
462   /*
463     Second balancing step.
464   */
465   {
466     PetscBool flg = PETSC_FALSE;
467     PetscCall(PetscOptionsGetBool(NULL, NULL, "-pc_turn_off_second_balancing", &flg, NULL));
468     if (!flg) {
469       PetscCall(PCNNBalancing(pc, r, vec1_B, z, vec2_B, vec3_B, (Vec)0, vec1_D, vec2_D, work_N));
470     } else {
471       PetscCall(VecPointwiseMult(vec2_B, pcis->D, vec1_B));
472       PetscCall(VecSet(z, 0.0));
473       PetscCall(VecScatterBegin(pcis->global_to_B, vec2_B, z, ADD_VALUES, SCATTER_REVERSE));
474       PetscCall(VecScatterEnd(pcis->global_to_B, vec2_B, z, ADD_VALUES, SCATTER_REVERSE));
475     }
476   }
477   PetscFunctionReturn(PETSC_SUCCESS);
478 }
479 
480 /*
481    PCNNBalancing - Computes z, as given in equations (15) and (16) (if the
482                    input argument u is provided), or s, as given in equations
483                    (12) and (13), if the input argument u is a null vector.
484                    Notice that the input argument u plays the role of u_i in
485                    equation (14). The equation numbers refer to [Man93].
486 
487    Input Parameters:
488 +  pcnn - NN preconditioner context.
489 .  r - MPI vector of all nodes (interior and interface). It's preserved.
490 -  u - (Optional) sequential vector of local interface nodes. It's preserved UNLESS vec3_B is null.
491 
492    Output Parameters:
493 +  z - MPI vector of interior and interface nodes. Returns s or z (see description above).
494 .  vec1_B - Sequential vector of local interface nodes. Workspace.
495 .  vec2_B - Sequential vector of local interface nodes. Workspace.
496 .  vec3_B - (Optional) sequential vector of local interface nodes. Workspace.
497 .  vec1_D - Sequential vector of local interior nodes. Workspace.
498 .  vec2_D - Sequential vector of local interior nodes. Workspace.
499 -  work_N - Array of all local nodes (interior and interface). Workspace.
500 
501 */
PCNNBalancing(PC pc,Vec r,Vec u,Vec z,Vec vec1_B,Vec vec2_B,Vec vec3_B,Vec vec1_D,Vec vec2_D,PetscScalar * work_N)502 PetscErrorCode PCNNBalancing(PC pc, Vec r, Vec u, Vec z, Vec vec1_B, Vec vec2_B, Vec vec3_B, Vec vec1_D, Vec vec2_D, PetscScalar *work_N)
503 {
504   PetscInt     k;
505   PetscScalar  value;
506   PetscScalar *lambda;
507   PC_NN       *pcnn = (PC_NN *)pc->data;
508   PC_IS       *pcis = (PC_IS *)pc->data;
509 
510   PetscFunctionBegin;
511   PetscCall(PetscLogEventBegin(PC_ApplyCoarse, pc, 0, 0, 0));
512   if (u) {
513     if (!vec3_B) vec3_B = u;
514     PetscCall(VecPointwiseMult(vec1_B, pcis->D, u));
515     PetscCall(VecSet(z, 0.0));
516     PetscCall(VecScatterBegin(pcis->global_to_B, vec1_B, z, ADD_VALUES, SCATTER_REVERSE));
517     PetscCall(VecScatterEnd(pcis->global_to_B, vec1_B, z, ADD_VALUES, SCATTER_REVERSE));
518     PetscCall(VecScatterBegin(pcis->global_to_B, z, vec2_B, INSERT_VALUES, SCATTER_FORWARD));
519     PetscCall(VecScatterEnd(pcis->global_to_B, z, vec2_B, INSERT_VALUES, SCATTER_FORWARD));
520     PetscCall(PCISApplySchur(pc, vec2_B, vec3_B, (Vec)0, vec1_D, vec2_D));
521     PetscCall(VecScale(vec3_B, -1.0));
522     PetscCall(VecCopy(r, z));
523     PetscCall(VecScatterBegin(pcis->global_to_B, vec3_B, z, ADD_VALUES, SCATTER_REVERSE));
524     PetscCall(VecScatterEnd(pcis->global_to_B, vec3_B, z, ADD_VALUES, SCATTER_REVERSE));
525   } else {
526     PetscCall(VecCopy(r, z));
527   }
528   PetscCall(VecScatterBegin(pcis->global_to_B, z, vec2_B, INSERT_VALUES, SCATTER_FORWARD));
529   PetscCall(VecScatterEnd(pcis->global_to_B, z, vec2_B, INSERT_VALUES, SCATTER_FORWARD));
530   PetscCall(PCISScatterArrayNToVecB(pc, work_N, vec2_B, INSERT_VALUES, SCATTER_REVERSE));
531   for (k = 0, value = 0.0; k < pcis->n_shared[0]; k++) value += pcnn->DZ_IN[0][k] * work_N[pcis->shared[0][k]];
532   value *= pcnn->factor_coarse_rhs; /* This factor is set in CreateCoarseMatrix(). */
533   {
534     PetscMPIInt rank;
535     PetscCallMPI(MPI_Comm_rank(PetscObjectComm((PetscObject)pc), &rank));
536     PetscCall(VecSetValue(pcnn->coarse_b, rank, value, INSERT_VALUES));
537     /*
538        Since we are only inserting local values (one value actually) we don't need to do the
539        reduction that tells us there is no data that needs to be moved. Hence we comment out these
540        PetscCall(VecAssemblyBegin(pcnn->coarse_b));
541        PetscCall(VecAssemblyEnd  (pcnn->coarse_b));
542     */
543   }
544   PetscCall(KSPSolve(pcnn->ksp_coarse, pcnn->coarse_b, pcnn->coarse_x));
545   if (!u) PetscCall(VecScale(pcnn->coarse_x, -1.0));
546   PetscCall(VecGetArray(pcnn->coarse_x, &lambda));
547   for (k = 0; k < pcis->n_shared[0]; k++) work_N[pcis->shared[0][k]] = *lambda * pcnn->DZ_IN[0][k];
548   PetscCall(VecRestoreArray(pcnn->coarse_x, &lambda));
549   PetscCall(PCISScatterArrayNToVecB(pc, work_N, vec2_B, INSERT_VALUES, SCATTER_FORWARD));
550   PetscCall(VecSet(z, 0.0));
551   PetscCall(VecScatterBegin(pcis->global_to_B, vec2_B, z, ADD_VALUES, SCATTER_REVERSE));
552   PetscCall(VecScatterEnd(pcis->global_to_B, vec2_B, z, ADD_VALUES, SCATTER_REVERSE));
553   if (!u) {
554     PetscCall(VecScatterBegin(pcis->global_to_B, z, vec2_B, INSERT_VALUES, SCATTER_FORWARD));
555     PetscCall(VecScatterEnd(pcis->global_to_B, z, vec2_B, INSERT_VALUES, SCATTER_FORWARD));
556     PetscCall(PCISApplySchur(pc, vec2_B, vec1_B, (Vec)0, vec1_D, vec2_D));
557     PetscCall(VecCopy(r, z));
558   }
559   PetscCall(VecScatterBegin(pcis->global_to_B, vec1_B, z, ADD_VALUES, SCATTER_REVERSE));
560   PetscCall(VecScatterEnd(pcis->global_to_B, vec1_B, z, ADD_VALUES, SCATTER_REVERSE));
561   PetscCall(PetscLogEventEnd(PC_ApplyCoarse, pc, 0, 0, 0));
562   PetscFunctionReturn(PETSC_SUCCESS);
563 }
564 
565 /*  From now on, "footnotes" (or "historical notes").  */
566 /*
567    Historical note 01
568 
569    We considered the possibility of an alternative D_i that would still
570    provide a partition of unity (i.e., $ \sum_i  N_i D_i N_i^T = I $).
571    The basic principle was still the pseudo-inverse of the counting
572    function; the difference was that we would not count subdomains
573    that do not contribute to the coarse space (i.e., not pure-Neumann
574    subdomains).
575 
576    This turned out to be a bad idea:  we would solve trivial Neumann
577    problems in the not pure-Neumann subdomains, since we would be scaling
578    the balanced residual by zero.
579 */
580 
581 /*
582    Historical note 02
583 
584    We tried an alternative coarse problem, that would eliminate exactly a
585    constant error. Turned out not to improve the overall convergence.
586 */
587