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/petsc/config/BuildSystem/config/packages/
H A DBlasLapack.py20 …lf.libDirs = [os.path.join('lib','64'),os.path.join('lib','ia64'),os.path.join('lib','…
21 … 'ia64','em64t','intel64', os.path.join('lib','32'),os.path.join('lib','ia32'),'32','ia32','']
238 libDir = os.path.join(self.f2cblaslapack.directory,'lib')
239 f2cBlas = [os.path.join(libDir,'libf2cblas.a')]
243 f2cLapack = [os.path.join(libDir,'libf2clapack.a')]
250 libDir = os.path.join(self.netliblapack.directory,'lib')
252 …iblapack', [os.path.join(libDir,'libcblas.a'), os.path.join(libDir,'libblas.a')], [os.path.join(li…
254 …yield ('netliblapack', [os.path.join(libDir,'libnblas.a')], [os.path.join(libDir,'libnlapack.a')],…
259 libDir = os.path.join(self.fblaslapack.directory,'lib')
260 …yield ('fblaslapack', os.path.join(libDir,'libfblas.a'), os.path.join(libDir,'libflapack.a'), '32'…
[all …]
H A DHPDDM.py39 buildDir = os.path.join(self.packageDir,'petsc-build')
51 prefix = os.path.join(self.petscdir.dir,self.arch)
52 incDir = os.path.join(prefix,'include')
53 libDir = os.path.join(prefix,self.libDirs[0])
57 …output,err,ret = config.package.Package.executeShellCommand(['cp','-rf',os.path.join(self.packageD…
62 ldflags = ' '.join(self.setCompilers.sharedLibraryFlags)
63 …cxxflags += ' '+self.headers.toStringNoDupes(self.dinclude+[os.path.join(PETSC_DIR,'include'),incD…
65 ldflags += ' '+self.libraries.toStringNoDupes(self.dlib+[os.path.join(libDir,'libpetsc')])
67 …ldflags += ' '+self.libraries.toStringNoDupes(self.dlib+[os.path.join(libDir,'libpetscml'),'-lpets…
76 …' ' + cxxflags + ' ' + os.path.join(self.packageDir,'interface','hpddm_petsc.cpp') + ' ' + ldflags…
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H A Dgrid.py24 args.append('--exec-prefix='+os.path.join(self.installDir, 'Grid'))
38 eigenDir = os.path.join(self.installDir, 'include', 'eigen3', 'Eigen')
39 gridDir = os.path.join(self.packageDir, 'Grid', 'Eigen')
42 eigenDir = os.path.join(self.installDir, 'include', 'eigen3', 'unsupported', 'Eigen')
43 eigenUnDir = os.path.join(self.installDir, 'include', 'eigen3', 'Eigen', 'unsupported')
52 eigenDir = os.path.join(self.installDir, 'include', 'eigen3', 'Eigen')
56 files.append(os.path.join(root, filename))
57 with open(os.path.join(self.packageDir, 'Grid', 'Eigen.inc'), 'w') as f:
60 f.write(' ' + os.path.join(root, filename) + ' \\\n')
61 f.write(' ' + os.path.join(root, files[-1]) + '\n')
H A DMatlab.py41 if os.path.isfile(os.path.join('/Applications',dir,'bin','matlab')):
42 yield os.path.join('/Applications',dir)
52 interpreter = os.path.join(matlab,'bin','matlab')
69 if not os.path.isdir(os.path.join(matlab,'extern','lib')):
74 ls = os.listdir(os.path.join(matlab,'extern','lib'))
84 self.mex = os.path.join(matlab,'bin','mex')
88 self.executable = os.path.join(matlab,'bin','matlab -'+self.matlab_arch)
89 self.include = [os.path.join(matlab,'extern','include')]
100 …= [self.setCompilers.CSharedLinkerFlag+os.path.join(self.matlab,'bin',self.matlab_arch),'-L'+os.pa…
109 …o use MATLAB because cannot locate MATLAB external libraries at '+os.path.join(matlab,'extern','li…
H A DAMReX.py72 args.append('-DPETSC_DIR='+os.path.join(self.petscdir.dir))
74 args.append('-DHYPRE_ROOT='+os.path.join(self.petscdir.dir,self.arch))
78 args.append('-DHYPRE_ROOT='+os.path.join(self.petscdir.dir,self.arch))
91 args = ' '.join(args)
92 conffile = os.path.join(self.packageDir,self.package+'.petscconf')
103 folder = os.path.join(self.packageDir, 'petsc-build')
112 …self.include_a = '-I'+os.path.join(os.path.abspath(os.path.expanduser(self.argDB['prefix'])),'incl…
113 …self.lib_a = [os.path.join(os.path.abspath(os.path.expanduser(self.argDB['prefix'])),'lib',self.li…
116 self.include_a = '-I'+os.path.join(self.petscdir.dir,self.arch,'include')
117 self.lib_a = [os.path.join(self.petscdir.dir,self.arch,'lib',self.liblist[0][0])]
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H A DTriangle.py35 libDir = os.path.join(self.installDir, 'lib')
36 includeDir = os.path.join(self.installDir, 'include')
37 makeinc = os.path.join(self.packageDir, 'make.inc')
38 installmakeinc = os.path.join(self.installDir, 'make.inc')
126 …output,err,ret = config.package.Package.executeShellCommand('mkdir -p '+os.path.join(self.installD…
127 …output,err,ret = config.package.Package.executeShellCommand('mkdir -p '+os.path.join(self.installD…
128 …output,err,ret = config.package.Package.executeShellCommand('mkdir -p '+os.path.join(self.installD…
129 …cuteShellCommand('cp -f '+os.path.join(self.packageDir,'libtriangle.'+self.setCompilers.AR_LIB_SUF…
130 …output2,err2,ret2 = config.package.Package.executeShellCommand('cp -f '+os.path.join(self.package…
136 …ackage.Package.executeShellCommand('cp -f '+os.path.join(self.packageDir,'triangle')+' '+os.path.j…
H A Dtchem.py24 includeDir = os.path.join(self.installDir, 'include')
25 shareDir = os.path.join(self.installDir, 'share')
38 conffile = os.path.join(self.packageDir, self.package)
40 fd.write(' '.join(args))
54 ['cp'] + glob.glob(os.path.join(self.packageDir, 'include', 'TC_*')) + [includeDir],
55 ['cp'] + glob.glob(os.path.join(self.packageDir, 'lib', 'libtchem*')) + [libDir],
56 ['cp', os.path.join(self.packageDir, 'data', 'periodictable.dat'), shareDir],
/petsc/doc/
H A Dbuild_man_pages.py32 doctext_path = os.path.join(build_dir,'manualpages','doctext')
34 if os.path.isfile(os.path.join(dir,'makefile')):
35 lmansec = findlmansec(os.path.join(dir,'makefile'))
40 …if os.path.isfile(os.path.join(dir,file)) and pathlib.Path(file).suffix in ['.c', '.cxx', '.h', '.…
43 llmansec = findlmansec(os.path.join(dir,file))
45 …if not os.path.isdir(os.path.join(build_dir,'manualpages',llmansec)): os.mkdir(os.path.join(build_…
49 '-mpath', os.path.join(build_dir,'manualpages',llmansec),
51 '-defn', os.path.join(build_dir,'manualpages','doctext','myst.def'),
53 '-index', os.path.join(build_dir,'manualpages','manualpages.cit'),
55 '-Wargdesc', os.path.join(build_dir,'manualpages','doctext','doctextcommon.txt'),
[all …]
H A Dbuild_c2html.py27 …with open('htmlmap.tmp', "w") as fdw, open(os.path.join(build_dir,'manualpages','htmlmap'), "r") a…
29 …with open('htmlmap.tmp', "a") as fdw, open(os.path.join(build_dir,'manualpages','mpi.www.index'), …
40 if not os.path.isdir(os.path.join(loc,root)): os.makedirs(os.path.join(loc,root))
41 …allfiles.extend([os.path.join(loc,root,f+'.html') for f in files if any([s for s in SUFFIXES if f.…
44 with open(os.path.join(loc,root,'index.html'),'w') as fdw:
49 if os.path.isfile(os.path.join(root,'makefile')):
50 with open(os.path.join(root,'makefile')) as mklines:
54 with open(os.path.join('doc','manualpages','MANSECHeaders',mansec)) as fd:
66 with open(os.path.join(root,f)) as fd:
87 fdw.write('<a href="' + os.path.join(d,'index.html') + '">' + d + '</a><br>\n')
[all …]
H A Dconf.py42 includedir = os.path.join('..', 'include', 'petscversion.h')
43 if not os.path.isfile(includedir): includedir = os.path.join('..', '..', 'include', 'petscversion.h…
56 version = '.'.join([major_version, minor_version])
57 release = '.'.join([major_version,minor_version,subminor_version])
100 html_logo_light = os.path.join('images', 'logos', 'PETSc_TAO_logos', 'PETSc-TAO', 'web', 'PETSc-TAO…
101 html_logo_dark = os.path.join('images', 'logos', 'PETSc_TAO_logos', 'PETSc-TAO', 'web', 'PETSc-TAO_…
147 html_favicon = os.path.join('images', 'logos', 'PETSc_TAO_logos', 'PETSc', 'petsc_favicon.png')
191 … app.petsc_dir = os.path.abspath(os.path.join(os.path.dirname(os.path.abspath(__file__)), ".."))
219 if os.path.isdir(os.path.join(app.outdir,'_sources','manualpages')):
220 shutil.rmtree(os.path.join(app.outdir,'_sources','manualpages'))
[all …]
/petsc/src/binding/petsc4py/demo/legacy/wrap-cython/
H A Dsetup.py21 from os.path import join, isdir
22 if PETSC_ARCH and isdir(join(PETSC_DIR, PETSC_ARCH)):
23 INCLUDE_DIRS += [join(PETSC_DIR, PETSC_ARCH, 'include'),
24 join(PETSC_DIR, 'include')]
25 LIBRARY_DIRS += [join(PETSC_DIR, PETSC_ARCH, 'lib')]
28 INCLUDE_DIRS += [join(PETSC_DIR, 'include')]
29 LIBRARY_DIRS += [join(PETSC_DIR, 'lib')]
/petsc/lib/petsc/bin/maint/
H A Dabicheck.py46 petscconf = os.path.join(petsc_dir, petsc_arch, 'include', 'petscconf.h')
61 libname_so = os.path.join(petsc_dir, petsc_arch, 'lib', libname+'.so')
62 libname_dylib = os.path.join(petsc_dir, petsc_arch, 'lib', libname+'.dylib')
63 libname_a = os.path.join(petsc_dir, petsc_arch, 'lib', libname+'.a')
76 header = os.path.join(petsc_dir,'include',name+'.h')
97 file.write(os.path.join(petsc_dir,'include'))
99 file.write(os.path.join(petsc_dir,petsc_arch,'include'))
108 reportfile = os.path.join(abi_dir, report)
110 …abichecker = os.path.join(petsc_dir, 'lib', 'petsc', 'bin', 'maint', 'abi-compliance-checker',…
132 petscvariables = os.path.join(petsc_dir, petsc_arch, 'lib', 'petsc','conf', 'petscvariables')
[all …]
/petsc/src/binding/petsc4py/demo/legacy/wrap-f2py/
H A Dsetup.py25 from os.path import join, isdir
26 if PETSC_ARCH and isdir(join(PETSC_DIR, PETSC_ARCH)):
27 INCLUDE_DIRS += [join(PETSC_DIR, PETSC_ARCH, 'include'),
28 join(PETSC_DIR, 'include')]
29 LIBRARY_DIRS += [join(PETSC_DIR, PETSC_ARCH, 'lib')]
32 INCLUDE_DIRS += [join(PETSC_DIR, 'include')]
33 LIBRARY_DIRS += [join(PETSC_DIR, 'lib')]
/petsc/src/binding/petsc4py/demo/legacy/wrap-swig/
H A Dsetup.py27 from os.path import join, isdir
28 if PETSC_ARCH and isdir(join(PETSC_DIR, PETSC_ARCH)):
29 INCLUDE_DIRS += [join(PETSC_DIR, PETSC_ARCH, 'include'),
30 join(PETSC_DIR, 'include')]
31 LIBRARY_DIRS += [join(PETSC_DIR, PETSC_ARCH, 'lib')]
34 INCLUDE_DIRS += [join(PETSC_DIR, 'include')]
35 LIBRARY_DIRS += [join(PETSC_DIR, 'lib')]
/petsc/config/
H A Dinstall.py9 fd = open(os.path.join('lib','petsc','conf','petscvariables'))
18 fd = open(os.path.join('lib','petsc','conf','petscvariables'))
23 sys.path.insert(0, os.path.join(PETSC_DIR, 'config'))
24 sys.path.insert(0, os.path.join(PETSC_DIR, 'config', 'BuildSystem'))
37 argDB.saveFilename = os.path.join(PETSC_DIR, PETSC_ARCH, 'lib','petsc','conf', 'RDict.db')
70 self.archDir = os.path.join(self.rootDir, self.arch)
71 self.rootIncludeDir = os.path.join(self.rootDir, 'include')
72 self.archIncludeDir = os.path.join(self.rootDir, self.arch, 'include')
73 self.rootConfDir = os.path.join(self.rootDir, 'lib','petsc','conf')
74 self.archConfDir = os.path.join(self.rootDir, self.arch, 'lib','petsc','conf')
[all …]
H A Dgmakegentest.py71 install_files(os.path.join(source, name), os.path.join(destdir, os.path.basename(source)))
73 shutil.copyfile(source, os.path.join(destdir, os.path.basename(source)))
108 installdir=os.path.sep.join(dirlist[0:len(dirlist)-4])
111 self.srcdir=os.path.join(os.path.dirname(thisscriptdir),'src')
116 self.arch_dir=os.path.join(self.petsc_dir,self.petsc_arch)
118 self.srcdir=os.path.join(self.petsc_dir,'src')
170 lastfour=os.path.sep.join(dirlist[len(dirlist)-4:])
171 if lastfour==os.path.join('share','petsc','examples','config'):
207 srcaf=os.path.join(srcdir,af)
208 fullaf=os.path.join(self.petsc_dir,srcaf)
[all …]
H A Dgmakegen.py31 if loc > -1: return os.path.join(os.path.dirname(name),file[:loc])
64 … petsc_dir = parse_makefile(os.path.join('lib','petsc','conf', 'petscvariables')).get('PETSC_DIR')
72 …petsc_arch = parse_makefile(os.path.join(petsc_dir, 'lib','petsc','conf', 'petscvariables')).get('…
104 return os.path.join(self.petsc_dir, self.petsc_arch, *args)
107 return os.path.join(self.pkg_dir, self.pkg_arch, *args)
149 return os.path.relpath(os.path.join(root, src), self.pkg_dir)
164 …chain.from_iterable(os.walk(path) for path in [os.path.join(self.pkg_dir, 'src', pkg),os.path.join…
170 makefile = os.path.join(root,'makefile')
187 if root.find('/ftn/') > -1: nroot = ''.join(root.rsplit(pkg_arch + '/', 1))
201 …g)s := %(srcs)s\n' % dict(stem=stem, lang=lang.replace('_','.'), srcs=' '.join(sorted(srcs[lang]))…
[all …]
/petsc/config/PETSc/options/
H A DdataFilesPath.py31 homeloc = os.path.join(os.getenv('HOME', '.'), 'datafiles')
32 parentloc = os.path.join(self.petscdir.dir,'..','datafiles')
36 …if os.path.isdir(self.framework.argDB['DATAFILESPATH']) and os.path.isdir(os.path.join(self.framew…
40 elif os.path.isdir(homeloc) and os.path.isdir(os.path.join(homeloc,'matrices')):
42 elif os.path.isdir(parentloc) and os.path.isdir(os.path.join(parentloc,'matrices')):
44 …elif os.path.isdir(os.path.join(self.petscdir.dir, '..', '..','Datafiles')) & os.path.isdir(os.pa…
45 self.datafilespath = os.path.join(self.petscdir.dir, '..','..', 'Datafiles')
H A DinstallDir.py40 os.makedirs(os.path.join(self.dir,'PETScTestDirectory'))
41 os.rmdir(os.path.join(self.dir,'PETScTestDirectory'))
46 self.dir = os.path.abspath(os.path.join(self.petscdir.dir, self.arch.arch))
50 self.confDir = os.path.abspath(os.path.join(self.petscdir.dir, self.arch.arch))
54 dir = os.path.abspath(os.path.join(self.petscdir.dir, self.arch.arch))
57 for i in ['include','lib','bin',os.path.join('lib','petsc','conf')]:
58 newdir = os.path.join(dir,i)
63 confdir = os.path.join(dir,'lib','petsc','conf')
64 self.framework.argDB.saveFilename = os.path.abspath(os.path.join(confdir, 'RDict.db'))
78 …self.reconfigure_file = os.path.join(self.dir,'lib','petsc','conf','reconfigure-'+self.arch.arch+'…
/petsc/lib/petsc/bin/
H A Dpetsc_conf.py25 if os.path.isfile(os.path.join(petscdir,'lib','petsc','conf','petscrules')):
27 petscvariables = os.path.join(petscdir,'lib','petsc','conf','petscvariables')
28 petscconfinclude = os.path.join(petscdir,'include','petscconf.h')
32 if os.path.isfile(os.path.join(petscdir,petscarch,'lib','petsc','conf','petscrules')):
34 … petscvariables = os.path.join(petscdir,petscarch,'lib','petsc','conf','petscvariables')
35 petscconfinclude = os.path.join(petscdir,petscarch,'include','petscconf.h')
H A Dgeneratefortranbindings.py71 ofile = os.path.join(petscarch,'ftn', getAPI.mansecpath(mansec),file)
81 …with open(os.path.join(petscarch, 'include', pkgname, 'finclude', file.replace('.h90', '.h')),'a')…
227 dir = os.path.join(petscarch,'ftn',fun.mansec.lower(),'stubs')
230 dir = os.path.join(petscarch,fun.dir.replace('src/','ftn/'))
233 dir = os.path.join(fun.dir,'ftn-custom')
237 with open(os.path.join(dir,filename.replace('.c','f.c')),'a') as fd:
432 shutil.copy(os.path.join(fun.dir,'makefile'), os.path.join(dir,'makefile'))
434 with open(os.path.join(fun.dir,'makefile')) as fin:
435 with open(os.path.join(dir,'makefile'),'w') as fout:
437 output = check_output('git add ' + os.path.join(dir,'makefile'), shell=True).decode('utf-8')
[all …]
/petsc/config/BuildSystem/config/
H A Dpython.py28 …self.compilers.CPPFLAGS += ' '+' '.join([self.headers.getIncludeArgument(inc) for inc in includeDi…
38 …self.compilers.CPPFLAGS += ' '+' '.join([self.headers.getIncludeArgument(inc) for inc in self.incl…
39 …self.compilers.LIBS = ' '.join([self.libraries.getLibArgument(lib) for lib in self.lib])+' '+self.…
60 os.path.join('/System', 'Library', 'Frameworks'),
61 os.path.join('/Library', 'Frameworks')]
65 lib = os.path.join(libDir, dylib)
97 self.addMakeMacro('PYTHON_INCLUDE', ' '.join(['-I'+inc for inc in self.include]))
98 self.addSubstitution('PYTHON_INCLUDE', ' '.join(['-I'+inc for inc in self.include]))
104 self.addMakeMacro('PYTHON_LIB', ' '.join(map(self.libraries.getLibArgument, self.lib)))
105 self.addSubstitution('PYTHON_LIB', ' '.join(map(self.libraries.getLibArgument, self.lib)))
/petsc/src/binding/petsc4py/docs/source/
H A Dconf.py39 topdir = os.path.abspath(os.path.join(docdir, *[os.path.pardir] * 2))
43 with open(os.path.join(topdir, 'src', package, '__init__.py')) as f:
50 if topdir.endswith(os.path.join(os.path.sep, 'src', 'binding', package)):
51 rootdir = os.path.abspath(os.path.join(topdir, *[os.path.pardir] * 3))
53 version_h = os.path.join(rootdir, 'include', f'{rootname}version.h')
165 os.path.join(os.environ['LOC'], 'objects.inv')
167 inventory_url = 'file://' + os.path.join(os.environ['LOC'], 'objects.inv')
176 obj.name = 'petsc.' + '/'.join(obj.name.split('/')[2:])
224 args = ', '.join(stringify_annotation(a, *p, **kw) for a in args)
328 demo_dir = os.path.join('demo', os.path.dirname(demo))
[all …]
/petsc/systems/Apple/iOS/bin/
H A Diosbuilder.py21 sys.path.insert(0, os.path.join(os.environ['PETSC_DIR'], 'config'))
22 sys.path.insert(0, os.path.join(os.environ['PETSC_DIR'], 'config', 'BuildSystem'))
32 …argDB.saveFilename = os.path.join(os.environ['PETSC_DIR'], os.environ['PETSC_ARCH'], 'lib','petsc'…
114 basedir = os.path.join(os.environ['PETSC_DIR'],os.environ['PETSC_ARCH'],'xcode-links')
135 …if not os.path.islink(os.path.join(basedir,i)) and not i.startswith('.') and i.find(".BACKUP") == …
136 if i.endswith('openglops.c') and not os.path.islink(os.path.join(basedir,'openglops.m')):
137 os.symlink(os.path.join(dirname,i),os.path.join(basedir,'openglops.m'))
139 os.symlink(os.path.join(dirname,i),os.path.join(basedir,i))
174 fname = os.path.join(dirname, 'makefile')
176 …if os.path.isfile(os.path.join(dirname, 'Makefile')): print('ERROR: Change Makefile to makefile in…
[all …]
/petsc/
H A Dsetup.py90 sys.path.insert(0, os.path.join(PETSC_DIR, 'config'))
91 sys.path.insert(0, os.path.join(PETSC_DIR, 'lib','petsc','conf'))
94 pkgdir = os.path.join('config', 'pypi')
100 with open(os.path.join(pkgdir, pyfile), 'w') as fh:
169 status = os.system(" ".join(command))
181 include = os.path.join(pdir, parch, 'include')
187 filename = os.path.join(include, filename)
212 status = os.system(" ".join(command))
229 status = os.system(" ".join(command))
261 prefix = os.path.join(root_dir, 'petsc')
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