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/honee/doc/
H A Dtheory.md13 \frac{\partial \rho}{\partial t} + \nabla \cdot \bm{U} &= 0 \\
14 \frac{\partial \bm{U}}{\partial t} + \nabla \cdot \left( \frac{\bm{U} \otimes \bm{U}}{\rho} + P \bm…
15 \frac{\partial E}{\partial t} + \nabla \cdot \left( \frac{(E + P)\bm{U}}{\rho} -\bm{u} \cdot \bm{\s…
31 \frac{\partial \bm{q}}{\partial t} + \nabla \cdot \bm{F}(\bm{q}) -S(\bm{q}) = 0 \, ,
79 \bm{q}_N (\bm{x},t)^{(e)} = \sum_{k=1}^{P}\psi_k (\bm{x})\bm{q}_k^{(e)}
88 \int_{\Omega} \bm v \cdot \left(\frac{\partial \bm{q}_N}{\partial t} + \nabla \cdot \bm{F}(\bm{q}_N…
97 \int_{\Omega} \bm v \cdot \left( \frac{\partial \bm{q}_N}{\partial t} - \bm{S}(\bm{q}_N) \right) \…
111 <!-- TODO: This should be reframed in terms of PETSc TS's F(t, u, \dot u) = G(t, u) rather than spe…
120 \bm{q}_N^{n+1} = \bm{q}_N^n + \Delta t \sum_{i=1}^{s} b_i k_i \, ,
127 k_1 &= f(t^n, \bm{q}_N^n)\\
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H A Dauxiliary.md13 …= \frac{1}{L_z + (T_f - T_0)}\int_0^{L_z} \int_{T_0}^{T_f} \phi(x, y, z, t) \mathrm{d}t \mathrm{d}z
34 \langle \phi \rangle_z(x,y,t) = \frac{1}{L_z} \int_0^{L_z} \phi(x, y, z, t) \mathrm{d}z
47 …_N = \int_0^{L_x} \int_0^{L_y} \left [\frac{1}{L_z} \int_0^{L_z} \phi(x,y,z,t) \mathrm{d}z \right …
53 \bm M [\langle \phi \rangle_z]_N = \frac{1}{L_z} \int_\Omega \phi(x,y,z,t) \psi^\mathrm{parent}_N(x…
73 …_z + (T_f - T_0)} \int_\Omega \int_{T_0}^{T_f} \phi(x,y,z,t) \psi^\mathrm{parent}_N \mathrm{d}t \m…
75 where the integral $\int_{T_0}^{T_f} \phi(x,y,z,t) \mathrm{d}t$ is calculated on a running basis.
H A Dexamples.md67 At time $t=0$, this domain is subjected to freestream boundary conditions at the inflow (left) and …
119 …defined in terms of the Exner pressure, $\pi(\bm{x},t)$, and potential temperature, $\theta(\bm{x}…
122 …{P_0}{( c_p - c_v)\theta(\bm{x},t)} \pi(\bm{x},t)^{\frac{c_v}{ c_p - c_v}} \, , \\ e &= c_v \theta…
423 \frac{\partial \rho}{\partial t} + \nabla \cdot \bm{U} &= 0 \\
424 \frac{\partial \bm{U}}{\partial t} + \nabla \cdot \left( \frac{\bm{U} \otimes \bm{U}}{\rho} + P \bm…
425 \frac{\partial E}{\partial t} + \nabla \cdot \left( \frac{(E + P)\bm{U}}{\rho} \right) &= 0 \, , \\
549 \frac{\partial E}{\partial t} + \nabla \cdot (\bm{u} E ) - \kappa \nabla E = 0 \, ,
/honee/src/
H A Dsetupts.c18 PetscErrorCode UpdateBoundaryValues(Honee honee, Vec Q_loc, PetscReal t) { in UpdateBoundaryValues() argument
20 if (honee->time_bc_set != t) { in UpdateBoundaryValues()
21 PetscCall(DMPlexInsertBoundaryValues(honee->dm, PETSC_TRUE, Q_loc, t, NULL, NULL, NULL)); in UpdateBoundaryValues()
22 honee->time_bc_set = t; in UpdateBoundaryValues()
30 PetscErrorCode RHS_NS(TS ts, PetscReal t, Vec Q, Vec G, void *user_data) { in RHS_NS() argument
39 PetscCall(UpdateBoundaryValues(honee, Q_loc, t)); in RHS_NS()
41 …d(ceed, CeedOperatorSetContextDouble(honee->op_rhs_ctx->op, honee->phys->solution_time_label, &t)); in RHS_NS()
116 PetscErrorCode IFunction_NS(TS ts, PetscReal t, Vec Q, Vec Q_dot, Vec G, void *user_data) { in IFunction_NS() argument
128 PetscCall(UpdateBoundaryValues(honee, Q_loc, t)); in IFunction_NS()
129 …eed(ceed, CeedOperatorSetContextDouble(honee->op_ifunction, honee->phys->solution_time_label, &t)); in IFunction_NS()
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H A Dmonitor_cfl.c168 time_t t = time(NULL); in TSMonitor_Cfl() local
176 …PetscCheck(strftime(buf, sizeof(buf), "%FT%T%z", localtime(&t)), comm, PETSC_ERR_SYS, "strftime() … in TSMonitor_Cfl()
178 …PetscCheck(strftime(buf, sizeof(buf), "%Z", localtime(&t)), comm, PETSC_ERR_SYS, "strftime() call … in TSMonitor_Cfl()
H A Dmonitor_totalkineticenergy.c167 time_t t = time(NULL); in TSMonitor_TotalKineticEnergy() local
179 …PetscCheck(strftime(buf, sizeof(buf), "%FT%T%z", localtime(&t)), comm, PETSC_ERR_SYS, "strftime() … in TSMonitor_TotalKineticEnergy()
181 …PetscCheck(strftime(buf, sizeof(buf), "%Z", localtime(&t)), comm, PETSC_ERR_SYS, "strftime() call … in TSMonitor_TotalKineticEnergy()
/honee/qfunctions/spanstats/
H A Dturbulence.h103 const CeedScalar t = context->time; in ChildStatsCollectionMMSTest() local
110 v[0][i] = wdetJ * (ChildStatsCollectionTest_Exact(x_i) + t - 0.5) * 4 * Cube(x_i[2]); in ChildStatsCollectionMMSTest()
/honee/qfunctions/
H A Dbc_outflow.h25 const CeedScalar t = exp(x / width); in Softplus_fwd() local
26 return t / (1 + t); in Softplus_fwd()
H A Dstg_shur14.h152 CEED_QFUNCTION_HELPER void StgShur14Calc(const CeedScalar X[3], const CeedScalar t, const CeedScala… in StgShur14Calc() argument
163 xhat[0] = (X[0] - stg_ctx->u0 * t) * Max(2 * kappa[0] / kappa[n], 0.1); in StgShur14Calc()
193 CEED_QFUNCTION_HELPER void StgShur14Calc_PrecompEktot(const CeedScalar X[3], const CeedScalar t, co… in StgShur14Calc_PrecompEktot() argument
208 xhat[0] = (X[0] - stg_ctx->u0 * t) * Max(2 * kappa[0] / kappa[n], 0.1); in StgShur14Calc_PrecompEktot()
/honee/tests/
H A Djunit_common.py786 …t for t in get_test_args(suite_spec.get_source_path(test)) if re.search(search, t.name, re.IGNOREC…
/honee/tests/junit-xml/
H A DREADME.rst17 something doesn't work like you expect it to.
/honee/
H A DCONTRIBUTING.md54 …n issue if you believe your contributions have met these criteria and haven't yet been acknowledge…
H A DLICENSE-APACHE182 replaced with your own identifying information. (Don't include
H A DDoxyfile199 # less readable) file names. This can be useful is your file systems doesn't
859 # a documented function twice, or documenting parameters that don't exist or
2295 # so different doxyrules.make files included by the same Makefile don't
2761 # Note: This tag requires that UML_LOOK isn't set, i.e. the doxygen internal
/honee/include/
H A Dnavierstokes.h288 PetscErrorCode UpdateBoundaryValues(Honee honee, Vec Q_loc, PetscReal t);