1 // SPDX-FileCopyrightText: Copyright (c) 2017-2024, HONEE contributors. 2 // SPDX-License-Identifier: Apache-2.0 OR BSD-2-Clause 3 4 // HONEE - High-Order Navier-stokes Equation Evaluator 5 // Sample runs: 6 // 7 // ./navierstokes -ceed /cpu/self -options_file gaussianwave.yml 8 // ./navierstokes -ceed /gpu/cuda -problem advection -degree 1 9 // 10 11 const char help[] = "HONEE - High-Order Navier-stokes Equation Evaluator\n"; 12 13 #include <navierstokes.h> 14 #include <petscdevice.h> 15 16 #include <ceed.h> 17 #include <petscdmplex.h> 18 #include <petscts.h> 19 20 int main(int argc, char **argv) { 21 AppCtx app_ctx; 22 ProblemData problem; 23 Honee honee; 24 SimpleBC bc; 25 Physics phys_ctx; 26 Units units; 27 MPI_Comm comm; 28 29 PetscCall(PetscInitialize(&argc, &argv, NULL, help)); 30 31 PetscCall(PetscCalloc1(1, &honee)); 32 PetscCall(PetscCalloc1(1, &app_ctx)); 33 PetscCall(PetscCalloc1(1, &problem)); 34 PetscCall(PetscCalloc1(1, &bc)); 35 PetscCall(PetscCalloc1(1, &phys_ctx)); 36 PetscCall(PetscCalloc1(1, &units)); 37 honee->app_ctx = app_ctx; 38 honee->units = units; 39 honee->phys = phys_ctx; 40 problem->set_bc_from_ics = PETSC_TRUE; 41 honee->comm = comm = PETSC_COMM_WORLD; 42 honee->start_time = time(NULL); 43 44 PetscCall(RegisterLogEvents()); 45 46 // --------------------------------------------------------------------------- 47 // Process command line options 48 // --------------------------------------------------------------------------- 49 // -- Process general command line options 50 PetscCall(ProcessCommandLineOptions(honee, bc)); 51 PetscCall(BoundaryConditionSetUp(honee, problem, app_ctx, bc)); 52 53 // --------------------------------------------------------------------------- 54 // Initialize libCEED 55 // --------------------------------------------------------------------------- 56 // -- Initialize backend 57 Ceed ceed; 58 { // Initialize Ceed 59 PetscCheck(CeedInit(app_ctx->ceed_resource, &ceed) == CEED_ERROR_SUCCESS, comm, PETSC_ERR_LIB, "Ceed initialization failed"); 60 honee->ceed = ceed; 61 PetscCheck(CeedSetErrorHandler(ceed, CeedErrorStore) == CEED_ERROR_SUCCESS, comm, PETSC_ERR_LIB, "Setting libCEED error handler failed"); 62 63 { // For SYCL backend, get stream handle from PETSc 64 const char *resource; 65 PetscCallCeed(ceed, CeedGetResource(ceed, &resource)); 66 if (strstr(resource, "/gpu/sycl")) { 67 PetscDeviceContext dctx; 68 PetscCall(PetscDeviceContextGetCurrentContext(&dctx)); 69 void *stream_handle; 70 PetscCall(PetscDeviceContextGetStreamHandle(dctx, &stream_handle)); 71 PetscCallCeed(ceed, CeedSetStream(ceed, stream_handle)); 72 } 73 } 74 } 75 76 DM dm; 77 { // Create DM 78 VecType vec_type = NULL; 79 MatType mat_type = NULL; 80 CeedMemType mem_type_backend; 81 82 PetscCallCeed(ceed, CeedGetPreferredMemType(ceed, &mem_type_backend)); 83 switch (mem_type_backend) { 84 case CEED_MEM_HOST: 85 vec_type = VECSTANDARD; 86 break; 87 case CEED_MEM_DEVICE: { 88 const char *resource; 89 PetscCallCeed(ceed, CeedGetResource(ceed, &resource)); 90 if (strstr(resource, "/gpu/cuda")) vec_type = VECCUDA; 91 else if (strstr(resource, "/gpu/hip")) vec_type = VECKOKKOS; 92 else if (strstr(resource, "/gpu/sycl")) vec_type = VECKOKKOS; 93 else vec_type = VECSTANDARD; 94 } 95 } 96 if (strstr(vec_type, VECCUDA)) mat_type = MATAIJCUSPARSE; 97 else if (strstr(vec_type, VECKOKKOS)) mat_type = MATAIJKOKKOS; 98 else mat_type = MATAIJ; 99 100 PetscCall(CreateDM(comm, problem, mat_type, vec_type, &dm)); 101 honee->dm = dm; 102 PetscCall(DMSetApplicationContext(dm, honee)); 103 } 104 105 { // Run problem setup function 106 PetscErrorCode (*p)(ProblemData, DM, void *, SimpleBC); 107 PetscCall(PetscFunctionListFind(app_ctx->problems, app_ctx->problem_name, &p)); 108 PetscCheck(p, PETSC_COMM_SELF, 1, "Problem '%s' not found", app_ctx->problem_name); 109 PetscCall((*p)(problem, dm, &honee, bc)); 110 } 111 112 // -- Set up DM 113 PetscCall(SetUpDM(dm, problem, app_ctx->degree, app_ctx->q_extra, bc, phys_ctx)); 114 115 // -- Refine DM for high-order viz 116 if (app_ctx->viz_refine) PetscCall(VizRefineDM(dm, honee, problem, bc, phys_ctx)); 117 118 // --------------------------------------------------------------------------- 119 // Create solution vectors 120 // --------------------------------------------------------------------------- 121 // -- Set up global state vector Q 122 Vec Q; 123 PetscCall(DMCreateGlobalVector(dm, &Q)); 124 PetscCall(VecZeroEntries(Q)); 125 PetscCall(DMCreateLocalVector(dm, &honee->Q_loc)); 126 PetscCall(DMCreateLocalVector(dm, &honee->Q_dot_loc)); 127 PetscCall(VecZeroEntries(honee->Q_dot_loc)); 128 129 // --------------------------------------------------------------------------- 130 // Set up libCEED 131 // --------------------------------------------------------------------------- 132 // -- Set up libCEED objects 133 PetscCall(SetupLibceed(ceed, dm, honee, app_ctx, problem, bc)); 134 135 // --------------------------------------------------------------------------- 136 // Set up ICs 137 // --------------------------------------------------------------------------- 138 // -- Fix multiplicity for ICs 139 PetscCall(ICs_FixMultiplicity(dm, honee, honee->Q_loc, Q, 0.0)); 140 141 // --------------------------------------------------------------------------- 142 // Record boundary values from initial condition 143 // --------------------------------------------------------------------------- 144 // -- This overrides DMPlexInsertBoundaryValues(). 145 // We use this for the main simulation DM because the reference DMPlexInsertBoundaryValues() is very slow on the GPU due to extra device-to-host 146 // communication. If we disable this, we should still get the same results due to the problem->bc function, but with potentially much slower 147 // execution. 148 if (problem->set_bc_from_ics) { 149 PetscCall(SetBCsFromICs(dm, Q, honee->Q_loc)); 150 } 151 152 // --------------------------------------------------------------------------- 153 // Gather initial Q values in case of continuation of simulation 154 // --------------------------------------------------------------------------- 155 // -- Set up initial values from binary file 156 if (app_ctx->use_continue_file) { 157 PetscCall(HoneeLoadInitialCondition(app_ctx->cont_file, &app_ctx->cont_steps, &app_ctx->cont_time, Q)); 158 } 159 160 // -- Zero Q_loc 161 PetscCall(VecZeroEntries(honee->Q_loc)); 162 163 // --------------------------------------------------------------------------- 164 // TS: Create, setup, and solve 165 // --------------------------------------------------------------------------- 166 TS ts; 167 PetscScalar final_time; 168 PetscCall(TSSolve_NS(dm, honee, app_ctx, phys_ctx, problem, Q, &final_time, &ts)); 169 170 // --------------------------------------------------------------------------- 171 // Post-processing 172 // --------------------------------------------------------------------------- 173 PetscCall(PostProcess(ts, dm, problem, honee, Q, final_time)); 174 175 // --------------------------------------------------------------------------- 176 // Destroy libCEED objects 177 // --------------------------------------------------------------------------- 178 179 PetscCall(TurbulenceStatisticsDestroy(honee->spanstats)); 180 PetscCall(NodalProjectionDataDestroy(honee->grad_velo_proj)); 181 PetscCall(SgsDDDataDestroy(honee->sgs_dd_data)); 182 PetscCall(DifferentialFilterDataDestroy(honee->diff_filter)); 183 PetscCall(SGS_DD_TrainingDataDestroy(honee->sgs_dd_train)); 184 PetscCall(SmartSimDataDestroy(honee->smartsim)); 185 PetscCall(QDataClearStoredData()); 186 PetscCall(DivDiffFluxProjectionDataDestroy(honee->diff_flux_proj)); 187 188 // -- Vectors 189 PetscCallCeed(ceed, CeedVectorDestroy(&honee->x_coord)); 190 PetscCallCeed(ceed, CeedVectorDestroy(&honee->q_ceed)); 191 PetscCallCeed(ceed, CeedVectorDestroy(&honee->q_dot_ceed)); 192 PetscCallCeed(ceed, CeedVectorDestroy(&honee->g_ceed)); 193 194 // -- Bases 195 PetscCallCeed(ceed, CeedBasisDestroy(&honee->basis_q)); 196 PetscCallCeed(ceed, CeedBasisDestroy(&honee->basis_x)); 197 198 // -- Restrictions 199 PetscCallCeed(ceed, CeedElemRestrictionDestroy(&honee->elem_restr_q)); 200 PetscCallCeed(ceed, CeedElemRestrictionDestroy(&honee->elem_restr_x)); 201 202 // Destroy QFunction contexts after using 203 // ToDo: Simplify tracked libCEED objects, smaller struct 204 { 205 PetscCallCeed(ceed, CeedQFunctionContextDestroy(&problem->apply_inflow.qfctx)); 206 PetscCallCeed(ceed, CeedQFunctionContextDestroy(&problem->apply_inflow_jacobian.qfctx)); 207 PetscCallCeed(ceed, CeedQFunctionContextDestroy(&problem->apply_outflow.qfctx)); 208 PetscCallCeed(ceed, CeedQFunctionContextDestroy(&problem->apply_outflow_jacobian.qfctx)); 209 PetscCallCeed(ceed, CeedQFunctionContextDestroy(&problem->apply_freestream.qfctx)); 210 PetscCallCeed(ceed, CeedQFunctionContextDestroy(&problem->apply_freestream_jacobian.qfctx)); 211 PetscCallCeed(ceed, CeedQFunctionContextDestroy(&problem->apply_slip.qfctx)); 212 PetscCallCeed(ceed, CeedQFunctionContextDestroy(&problem->apply_slip_jacobian.qfctx)); 213 PetscCallCeed(ceed, CeedQFunctionContextDestroy(&problem->ics.qfctx)); 214 PetscCallCeed(ceed, CeedQFunctionContextDestroy(&problem->apply_vol_rhs.qfctx)); 215 PetscCallCeed(ceed, CeedQFunctionContextDestroy(&problem->apply_vol_ifunction.qfctx)); 216 PetscCallCeed(ceed, CeedQFunctionContextDestroy(&problem->apply_vol_ijacobian.qfctx)); 217 } 218 219 // -- Operators 220 PetscCall(OperatorApplyContextDestroy(honee->op_ics_ctx)); 221 PetscCall(OperatorApplyContextDestroy(honee->op_rhs_ctx)); 222 PetscCall(OperatorApplyContextDestroy(honee->op_strong_bc_ctx)); 223 PetscCallCeed(ceed, CeedOperatorDestroy(&honee->op_ifunction)); 224 225 // -- Ceed 226 PetscCheck(CeedDestroy(&ceed) == CEED_ERROR_SUCCESS, comm, PETSC_ERR_LIB, "Destroying Ceed object failed"); 227 228 if (app_ctx->test_type != TESTTYPE_NONE) { 229 PetscInt num_options_left = 0; 230 PetscBool options_left = PETSC_TRUE; 231 232 PetscCall(PetscOptionsLeftGet(NULL, &num_options_left, NULL, NULL)); 233 PetscCall(PetscOptionsGetBool(NULL, NULL, "-options_left", &options_left, NULL)); 234 if (options_left) 235 PetscCheck(num_options_left == 0, PETSC_COMM_WORLD, -1, 236 "There are unused options. This is not allowed. See error message for the unused options (or use -options_left directly)"); 237 } 238 239 // --------------------------------------------------------------------------- 240 // Clean up PETSc 241 // --------------------------------------------------------------------------- 242 // -- Vectors 243 PetscCall(VecDestroy(&Q)); 244 PetscCall(VecDestroy(&honee->Q_loc)); 245 PetscCall(VecDestroy(&honee->Q_dot_loc)); 246 247 PetscCall(KSPDestroy(&honee->mass_ksp)); 248 249 // -- Matrices 250 PetscCall(MatDestroy(&honee->interp_viz)); 251 PetscCall(MatDestroy(&honee->mat_ijacobian)); 252 253 // -- DM 254 PetscCall(DMDestroy(&dm)); 255 PetscCall(DMDestroy(&honee->dm_viz)); 256 257 // -- TS 258 PetscCall(TSDestroy(&ts)); 259 260 // -- Function list 261 PetscCall(PetscFunctionListDestroy(&app_ctx->problems)); 262 263 PetscCall(PetscFree(app_ctx->amat_type)); 264 PetscCall(PetscFree(app_ctx->wall_forces.walls)); 265 PetscCall(PetscViewerDestroy(&app_ctx->wall_forces.viewer)); 266 PetscCall(PetscViewerDestroy(&app_ctx->turb_spanstats_viewer)); 267 268 // -- Structs 269 for (PetscInt i = 0; i < problem->num_bc_defs; i++) { 270 PetscCall(BCDefinitionDestroy(&problem->bc_defs[i])); 271 } 272 PetscCall(PetscFree(problem->bc_defs)); 273 PetscCall(PetscFree(units)); 274 PetscCall(PetscFree(honee)); 275 PetscCall(PetscFree(problem)); 276 PetscCall(PetscFree(bc)); 277 PetscCall(PetscFree(phys_ctx)); 278 PetscCall(PetscFree(app_ctx)); 279 PetscCall(PetscFree(honee)); 280 PetscCall(PetscFree(problem)); 281 282 return PetscFinalize(); 283 } 284 285 // ---------- Test Cases ---------- 286 287 //TESTARGS(name="Channel explicit div(F_diff) verify") -ceed {ceed_resource} -test_type solver -options_file tests/channel_divdiff_verify.yaml -div_diff_flux_projection_method direct -dm_plex_box_faces 4,3,1 -ts_max_steps 5 -compare_final_state_atol 2e-11 -compare_final_state_filename tests/output/channel_div_diff_verify_indirect_explicit.bin 288 //TESTARGS(name="Gaussian Wave, CGNS load",only="cpu") -ceed {ceed_resource} -options_file tests/gaussianwave_cgns_load.yaml -test_type solver -ts_max_steps 7 -dm_plex_filename tests/gaussianwave_test_5.cgns -continue_filename tests/gaussianwave_test_5.cgns -dm_plex_cgns_parallel -dm_plex_box_label -dm_plex_box_label_bd none,none,periodic -compare_final_state_atol 2e-11 -compare_final_state_filename tests/output/gaussianwave-cgns-load.bin 289 //TESTARGS(name="Taylor-Green Vortex Total KE") -ceed {ceed_resource} -test_type solver -options_file examples/taylor_green_vortex.yaml -dm_plex_box_faces 2,2,2 -ts_max_steps 3 -ts_monitor_total_kinetic_energy_interval 2 -ts_monitor_total_kinetic_energy ascii:taylorgreen_totalke.csv:ascii_csv -compare_final_state_atol 1e-10 -compare_final_state_filename tests/output/taylor-green.bin 290 //TESTARGS(name="Flat Plate STG",only="cpu") -ceed {ceed_resource} -options_file examples/flatplate_STG.yaml -dm_plex_box_faces 3,63,3 -dm_plex_box_upper -3.082,2.4,.00726 -ts_max_steps 1 -test_type solver -compare_final_state_atol 1e-10 -compare_final_state_filename tests/output/flatplate-STG.bin 291 //TESTARGS(name="Advection 2D, boundary layer IC",only="cpu") -ceed {ceed_resource} -test_type solver -options_file examples/advection_bl.yaml -dm_plex_box_faces 3,3 -ts_max_steps 0 -advection_ic_bl_height_factor 0.5 -compare_final_state_atol 1e-12 -compare_final_state_filename tests/output/adv2d-boundary-layer-ic.bin 292 //TESTARGS(name="Advection 2D, implicit square wave, direct div(F_diff)") -ceed {ceed_resource} -test_type solver -options_file examples/advection_wave.yaml -snes_mf -snes_fd -ts_type alpha -dm_plex_box_faces 5,5 -ts_max_steps 5 -diffusion_coeff 5e-3 -div_diff_flux_projection_method direct -ts_monitor_cfl ascii:adv2d-wave-square-direct_divdiff_cfl.csv:ascii_csv -compare_final_state_atol 1e-12 -compare_final_state_filename tests/output/adv2d-wave-square-direct_divdiff.bin 293 //TESTARGS(name="Advection 2D, explicit square wave, indirect div(F_diff)") -ceed {ceed_resource} -test_type solver -options_file examples/advection_wave.yaml -ts_max_steps 5 -dm_plex_box_faces 5,5 -diffusion_coeff 1e-2 -Ctau_d 2 -div_diff_flux_projection_method indirect -compare_final_state_atol 1e-12 -compare_final_state_filename tests/output/adv2d-wave-square-indirect_divdiff.bin 294 //TESTARGS(name="Advection 2D, sine wave IC",only="cpu") -ceed {ceed_resource} -test_type solver -options_file examples/advection_wave.yaml -ts_max_steps 0 -dm_plex_box_faces 3,3 -advection_ic_wave_type sine -compare_final_state_atol 1e-12 -compare_final_state_filename tests/output/adv2d-wave-sine.bin 295 //TESTARGS(name="Newtonian and Riemann Solver Unit Tests",only="cpu") -ceed {ceed_resource} -test_type solver -options_file examples/gaussianwave.yaml -compare_final_state_atol 1e100 -compare_final_state_filename tests/output/gaussianwave-IDL-entropy.bin -dm_plex_box_faces 5,5,1 -ts_max_steps 0 -newtonian_unit_tests -riemann_solver_unit_tests 296 //TESTARGS(name="Gaussian Wave, IDL and Entropy variables") -ceed {ceed_resource} -test_type solver -options_file examples/gaussianwave.yaml -compare_final_state_atol 2e-11 -compare_final_state_filename tests/output/gaussianwave-IDL-entropy.bin -state_var entropy -dm_plex_box_faces 5,5,1 -ts_max_steps 5 -idl_decay_time 2e-3 -idl_length 0.25 -idl_start 0 -idl_pressure 70 297 //TESTARGS(name="Blasius, SGS DataDriven Sequential Torch",only="torch") -ceed {ceed_resource} -options_file tests/blasius_stgtest.yaml -sgs_model_type data_driven -sgs_model_dd_leakyrelu_alpha 0.3 -sgs_model_dd_parameter_dir examples/dd_sgs_data -ts_dt 2e-9 -state_var primitive -ksp_rtol 1e-12 -snes_rtol 1e-12 -stg_mean_only -stg_fluctuating_IC -test_type solver -compare_final_state_atol 1e-10 -compare_final_state_filename tests/output/blasius-sgs-data-driven.bin -sgs_model_dd_implementation sequential_torch -sgs_model_dd_torch_model_path ./tests/createPyTorchModel/NNModel_HIT_fp64_jit.pt 298 //TESTARGS(name="Blasius, SGS DataDriven Sequential Ceed") -ceed {ceed_resource} -options_file tests/blasius_stgtest.yaml -sgs_model_type data_driven -sgs_model_dd_leakyrelu_alpha 0.3 -sgs_model_dd_parameter_dir examples/dd_sgs_data -ts_dt 2e-9 -state_var primitive -ksp_rtol 1e-12 -snes_rtol 1e-12 -stg_mean_only -stg_fluctuating_IC -test_type solver -compare_final_state_atol 1e-10 -compare_final_state_filename tests/output/blasius-sgs-data-driven.bin -sgs_model_dd_implementation sequential_ceed 299 //TESTARGS(name="Gaussian Wave, explicit, supg, IDL") -ceed {ceed_resource} -test_type solver -options_file examples/gaussianwave.yaml -compare_final_state_atol 1e-8 -compare_final_state_filename tests/output/gaussianwave-explicit.bin -dm_plex_box_faces 2,2,1 -ts_max_steps 5 -degree 3 -implicit false -ts_type rk -stab supg -state_var conservative -mass_ksp_type gmres -mass_pc_jacobi_type diagonal -idl_decay_time 2e-3 -idl_length 0.25 -idl_start 0 -idl_pressure 70 300 //TESTARGS(name="Advection 2D, rotation, explicit, supg, consistent mass") -ceed {ceed_resource} -test_type solver -problem advection -degree 3 -dm_plex_box_faces 2,2 -dm_plex_box_lower 0,0 -dm_plex_box_upper 125,125 -bc_wall 1,2,3,4 -wall_comps 4 -units_kilogram 1e-9 -advection_ic_bubble_rc 100. -ts_dt 1e-3 -ts_max_steps 10 -stab supg -Ctaus 0.5 -mass_ksp_type gmres -mass_pc_type vpbjacobi -compare_final_state_atol 1e-10 -compare_final_state_filename tests/output/adv2d-rotation-explicit-stab-supg-consistent-mass.bin 301 //TESTARGS(name="Advection, skew") -ceed {ceed_resource} -test_type solver -options_file examples/advection.yaml -ts_max_steps 5 -wind_type translation -wind_translation -0.5547002,0.83205029,0 -advection_ic_type skew -dm_plex_box_faces 2,1,1 -degree 2 -stab supg -stab_tau advdiff_shakib -Ctau_a 4 -Ctau_d 0 -ksp_type gmres -diffusion_coeff 5e-4 -compare_final_state_atol 7e-10 -compare_final_state_filename tests/output/adv-skew.bin 302 //TESTARGS(name="Blasius, bc_slip, Indirect Diffusive Flux Projection") -ceed {ceed_resource} -test_type solver -options_file examples/blasius.yaml -ts_max_steps 5 -dm_plex_box_faces 3,20,1 -platemesh_nDelta 10 -platemesh_growth 1.2 -bc_outflow 5 -bc_slip 4 -compare_final_state_atol 2E-11 -compare_final_state_filename tests/output/blasius-bc_slip_indirect.bin -div_diff_flux_projection_method indirect 303 //TESTARGS(name="Blasius, bc_slip, Direct Diffusive Flux Projection") -ceed {ceed_resource} -test_type solver -options_file examples/blasius.yaml -ts_max_steps 5 -dm_plex_box_faces 3,20,1 -platemesh_nDelta 10 -platemesh_growth 1.2 -bc_outflow 5 -bc_slip 4 -compare_final_state_atol 2E-11 -compare_final_state_filename tests/output/blasius-bc_slip.bin -div_diff_flux_projection_method direct 304 //TESTARGS(name="Advection, rotation, cosine, direct div(F_diff)") -ceed {ceed_resource} -test_type solver -options_file examples/advection.yaml -ts_max_steps 5 -advection_ic_type cosine_hill -dm_plex_box_faces 2,2,1 -diffusion_coeff 5e-3 -div_diff_flux_projection_method direct -compare_final_state_atol 1e-10 -compare_final_state_filename tests/output/adv-rotation-cosine.bin 305 //TESTARGS(name="Gaussian Wave, using MatShell") -ceed {ceed_resource} -test_type solver -options_file examples/gaussianwave.yaml -compare_final_state_atol 1e-8 -compare_final_state_filename tests/output/gaussianwave-shell.bin -dm_plex_box_faces 2,2,1 -ts_max_steps 5 -degree 3 -amat_type shell -pc_type vpbjacobi -ts_alpha_radius 0.5 306 //TESTARGS(name="Taylor-Green Vortex IC") -ceed {ceed_resource} -problem taylor_green -test_type solver -dm_plex_dim 3 -dm_plex_box_faces 6,6,6 -ts_max_steps 0 -compare_final_state_atol 1e-12 -compare_final_state_filename tests/output/taylor-green-IC.bin 307 //TESTARGS(name="Blasius, SGS DataDriven Fused") -ceed {ceed_resource} -options_file tests/blasius_stgtest.yaml -sgs_model_type data_driven -sgs_model_dd_leakyrelu_alpha 0.3 -sgs_model_dd_parameter_dir examples/dd_sgs_data -ts_dt 2e-9 -state_var primitive -ksp_rtol 1e-12 -snes_rtol 1e-12 -stg_mean_only -stg_fluctuating_IC -test_type solver -compare_final_state_atol 1e-10 -compare_final_state_filename tests/output/blasius-sgs-data-driven.bin 308 //TESTARGS(name="Blasius, Anisotropic Differential Filter") -ceed {ceed_resource} -test_type diff_filter -options_file tests/blasius_test.yaml -compare_final_state_atol 5e-10 -compare_final_state_filename tests/output/blasius_diff_filter_aniso_vandriest.bin -diff_filter_monitor -ts_max_steps 0 -state_var primitive -diff_filter_friction_length 1e-5 -diff_filter_wall_damping_function van_driest -diff_filter_ksp_rtol 1e-8 -diff_filter_grid_based_width -diff_filter_width_scaling 1,0.7,1 309 //TESTARGS(name="Blasius, Isotropic Differential Filter") -ceed {ceed_resource} -test_type diff_filter -options_file tests/blasius_test.yaml -compare_final_state_atol 2e-12 -compare_final_state_filename tests/output/blasius_diff_filter_iso.bin -diff_filter_monitor -ts_max_steps 0 -diff_filter_width_scaling 4.2e-5,4.2e-5,4.2e-5 -diff_filter_ksp_atol 1e-14 -diff_filter_ksp_rtol 1e-16 310 //TESTARGS(name="Gaussian Wave, with IDL") -ceed {ceed_resource} -test_type solver -options_file examples/gaussianwave.yaml -compare_final_state_atol 2e-11 -compare_final_state_filename tests/output/gaussianwave-IDL.bin -dm_plex_box_faces 5,5,1 -ts_max_steps 5 -idl_decay_time 2e-3 -idl_length 0.25 -idl_start 0 -ts_alpha_radius 0.5 -idl_pressure 70 311 //TESTARGS(name="Spanwise Turbulence Statistics") -ceed {ceed_resource} -test_type turb_spanstats -options_file tests/stats_test.yaml -compare_final_state_atol 1E-11 -compare_final_state_filename tests/output/turb-spanstats-stats.bin 312 //TESTARGS(name="Blasius") -ceed {ceed_resource} -test_type solver -options_file tests/blasius_test.yaml -compare_final_state_atol 2E-11 -compare_final_state_filename tests/output/blasius.bin 313 //TESTARGS(name="Blasius, STG Inflow") -ceed {ceed_resource} -test_type solver -options_file tests/blasius_stgtest.yaml -compare_final_state_atol 2E-11 -compare_final_state_filename tests/output/blasius_STG.bin 314 //TESTARGS(name="Blasius, STG Inflow, Weak Temperature") -ceed {ceed_resource} -test_type solver -options_file tests/blasius_stgtest.yaml -compare_final_state_atol 1E-11 -compare_final_state_filename tests/output/blasius_STG_weakT.bin -weakT 315 //TESTARGS(name="Blasius, Strong STG Inflow") -ceed {ceed_resource} -test_type solver -options_file tests/blasius_stgtest.yaml -compare_final_state_atol 1E-10 -compare_final_state_filename tests/output/blasius_STG_strongBC.bin -stg_strong true 316 //TESTARGS(name="Channel") -ceed {ceed_resource} -test_type solver -options_file examples/channel.yaml -compare_final_state_atol 2e-11 -compare_final_state_filename tests/output/channel.bin -dm_plex_box_faces 5,5,1 -ts_max_steps 5 317 //TESTARGS(name="Channel, Primitive") -ceed {ceed_resource} -test_type solver -options_file examples/channel.yaml -compare_final_state_atol 2e-11 -compare_final_state_filename tests/output/channel-prim.bin -dm_plex_box_faces 5,5,1 -ts_max_steps 5 -state_var primitive 318 //TESTARGS(name="Density Current, explicit") -ceed {ceed_resource} -test_type solver -degree 3 -q_extra 2 -dm_plex_box_faces 1,1,2 -dm_plex_box_lower 0,0,0 -dm_plex_box_upper 125,125,250 -dm_plex_dim 3 -bc_symmetry_x 5,6 -bc_symmetry_y 3,4 -bc_symmetry_z 1,2 -units_kilogram 1e-9 -center 62.5,62.5,187.5 -rc 100. -thetaC -35. -mu 75 -gravity 0,0,-9.81 -ts_dt 1e-3 -units_meter 1e-2 -units_second 1e-2 -ts_max_steps 10 -compare_final_state_atol 1E-11 -compare_final_state_filename tests/output/dc-explicit.bin 319 //TESTARGS(name="Density Current, implicit, no stabilization") -ceed {ceed_resource} -test_type solver -degree 3 -dm_plex_box_faces 1,1,2 -dm_plex_box_lower 0,0,0 -dm_plex_box_upper 125,125,250 -dm_plex_dim 3 -bc_symmetry_x 5,6 -bc_symmetry_y 3,4 -bc_symmetry_z 1,2 -units_kilogram 1e-9 -center 62.5,62.5,187.5 -rc 100. -thetaC -35. -mu 75 -gravity 0,0,-9.81 -units_meter 1e-2 -units_second 1e-2 -ksp_atol 1e-4 -ksp_rtol 1e-3 -ksp_type bcgs -snes_atol 1e-3 -snes_lag_jacobian 100 -snes_lag_jacobian_persists -snes_mf_operator -ts_dt 1e-3 -implicit -ts_type alpha -ts_max_steps 10 -compare_final_state_atol 5E-4 -compare_final_state_filename tests/output/dc-implicit-stab-none.bin 320 //TESTARGS(name="Advection, rotation, implicit, SUPG stabilization") -ceed {ceed_resource} -test_type solver -problem advection -CtauS .3 -stab supg -degree 3 -dm_plex_box_faces 1,1,2 -dm_plex_box_lower 0,0,0 -dm_plex_box_upper 125,125,250 -dm_plex_dim 3 -bc_wall 1,2,3,4,5,6 -wall_comps 4 -units_kilogram 1e-9 -advection_ic_bubble_rc 100. -ksp_atol 1e-4 -ksp_rtol 1e-3 -ksp_type bcgs -snes_atol 1e-3 -snes_lag_jacobian 100 -snes_lag_jacobian_persists -snes_mf_operator -ts_dt 1e-3 -implicit -dm_mat_preallocate_skip 0 -ts_type alpha -compare_final_state_atol 5E-4 -ts_max_steps 10 -compare_final_state_filename tests/output/adv-rotation-implicit-stab-supg.bin 321 //TESTARGS(name="Advection, translation, implicit, SU stabilization") -ceed {ceed_resource} -test_type solver -problem advection -CtauS .3 -stab su -degree 3 -dm_plex_box_faces 1,1,2 -dm_plex_box_lower 0,0,0 -dm_plex_box_upper 125,125,250 -dm_plex_dim 3 -units_kilogram 1e-9 -advection_ic_bubble_rc 100. -ksp_atol 1e-4 -ksp_rtol 1e-3 -ksp_type bcgs -snes_atol 1e-3 -snes_lag_jacobian 100 -snes_lag_jacobian_persists -snes_mf_operator -ts_dt 1e-3 -implicit -dm_mat_preallocate_skip 0 -ts_type alpha -wind_type translation -wind_translation .53,-1.33,-2.65 -bc_inflow 1,2,3,4,5,6 -ts_max_steps 10 -compare_final_state_atol 5E-4 -compare_final_state_filename tests/output/adv-translation-implicit-stab-su.bin 322 //TESTARGS(name="Advection 2D, rotation, explicit, strong form") -ceed {ceed_resource} -test_type solver -problem advection -strong_form 1 -degree 3 -dm_plex_box_faces 2,2 -dm_plex_box_lower 0,0 -dm_plex_box_upper 125,125 -bc_wall 1,2,3,4 -wall_comps 4 -units_kilogram 1e-9 -advection_ic_bubble_rc 100. -ts_dt 1e-3 -compare_final_state_atol 5E-11 -ts_max_steps 10 -compare_final_state_filename tests/output/adv2d-rotation-explicit-strong.bin 323 //TESTARGS(name="Advection 2D, rotation, implicit, SUPG stabilization") -ceed {ceed_resource} -test_type solver -problem advection -CtauS .3 -stab supg -degree 3 -dm_plex_box_faces 1,1,2 -dm_plex_box_lower 0,0 -dm_plex_box_upper 125,125 -bc_wall 1,2,3,4 -wall_comps 4 -units_kilogram 1e-9 -advection_ic_bubble_rc 100. -ksp_atol 1e-4 -ksp_rtol 1e-3 -ksp_type bcgs -snes_atol 1e-3 -snes_lag_jacobian 100 -snes_lag_jacobian_persists -snes_mf_operator -ts_dt 1e-3 -implicit -dm_mat_preallocate_skip 0 -ts_type alpha -ts_max_steps 10 -compare_final_state_atol 5E-4 -compare_final_state_filename tests/output/adv2d-rotation-implicit-stab-supg.bin 324 //TESTARGS(name="Euler, implicit") -ceed {ceed_resource} -test_type solver -problem euler_vortex -degree 3 -dm_plex_box_faces 1,1,2 -dm_plex_box_lower 0,0,0 -dm_plex_box_upper 125,125,250 -dm_plex_dim 3 -units_meter 1e-4 -units_second 1e-4 -mean_velocity 1.4,-2.,0 -bc_inflow 4,6 -bc_outflow 3,5 -bc_symmetry_z 1,2 -vortex_strength 2 -ksp_atol 1e-4 -ksp_rtol 1e-3 -ksp_type bcgs -snes_atol 1e-3 -snes_lag_jacobian 100 -snes_lag_jacobian_persists -snes_mf_operator -ts_dt 1e-3 -implicit -dm_mat_preallocate_skip 0 -ts_type alpha -ts_max_steps 10 -compare_final_state_atol 5E-4 -compare_final_state_filename tests/output/euler-implicit.bin 325 //TESTARGS(name="Euler, explicit") -ceed {ceed_resource} -test_type solver -problem euler_vortex -degree 3 -q_extra 2 -dm_plex_box_faces 2,2,1 -dm_plex_box_lower 0,0,0 -dm_plex_box_upper 125,125,250 -dm_plex_dim 3 -units_meter 1e-4 -units_second 1e-4 -mean_velocity 1.4,-2.,0 -bc_inflow 4,6 -bc_outflow 3,5 -bc_symmetry_z 1,2 -vortex_strength 2 -ts_dt 1e-7 -ts_rk_type 5bs -ts_rtol 1e-10 -ts_atol 1e-10 -ts_max_steps 10 -compare_final_state_atol 1E-7 -compare_final_state_filename tests/output/euler-explicit.bin 326 //TESTARGS(name="Sod Shocktube, explicit, SU stabilization, y-z-beta shock capturing") -ceed {ceed_resource} -test_type solver -problem shocktube -degree 1 -q_extra 2 -dm_plex_box_faces 50,1,1 -units_meter 1e-2 units_second 1e-2 -dm_plex_box_lower 0,0,0 -dm_plex_box_upper 1000,20,20 -dm_plex_dim 3 -bc_symmetry_x 5,6 -bc_symmetry_y 3,4 -bc_symmetry_z 1,2 -yzb -stab su -ts_max_steps 10 -compare_final_state_atol 1E-11 -compare_final_state_filename tests/output/shocktube-explicit-su-yzb.bin 327