1 // SPDX-FileCopyrightText: Copyright (c) 2017-2024, HONEE contributors. 2 // SPDX-License-Identifier: Apache-2.0 OR BSD-2-Clause 3 #pragma once 4 5 #include <bc_definition.h> 6 #include <ceed.h> 7 #include <dm-utils.h> 8 #include <honee-file.h> 9 #include <honee.h> 10 #include <log_events.h> 11 #include <mat-ceed.h> 12 #include <petsc-ceed-utils.h> 13 #include <petscts.h> 14 #include <stdbool.h> 15 #include <time.h> 16 17 #include <nodal_projection.h> 18 19 #include <petsc_ops.h> 20 #include "../qfunctions/newtonian_types.h" 21 22 #if PETSC_VERSION_LT(3, 23, 0) 23 #error "PETSc v3.23 or later is required" 24 #endif 25 26 // ----------------------------------------------------------------------------- 27 // Enums 28 // ----------------------------------------------------------------------------- 29 30 // Euler - test cases 31 typedef enum { 32 EULER_TEST_ISENTROPIC_VORTEX = 0, 33 EULER_TEST_1 = 1, 34 EULER_TEST_2 = 2, 35 EULER_TEST_3 = 3, 36 EULER_TEST_4 = 4, 37 EULER_TEST_5 = 5, 38 } EulerTestType; 39 static const char *const EulerTestTypes[] = {"ISENTROPIC_VORTEX", "1", "2", "3", "4", "5", "EulerTestType", "EULER_TEST_", NULL}; 40 41 // Test mode type 42 typedef enum { 43 TESTTYPE_NONE = 0, 44 TESTTYPE_SOLVER = 1, 45 TESTTYPE_TURB_SPANSTATS = 2, 46 TESTTYPE_DIFF_FILTER = 3, 47 TESTTYPE_SPANSTATS = 4, 48 } TestType; 49 static const char *const TestTypes[] = {"NONE", "SOLVER", "TURB_SPANSTATS", "DIFF_FILTER", "SPANSTATS", "TestType", "TESTTYPE_", NULL}; 50 51 // Subgrid-Stress mode type 52 typedef enum { 53 SGS_MODEL_NONE = 0, 54 SGS_MODEL_DATA_DRIVEN = 1, 55 } SGSModelType; 56 static const char *const SGSModelTypes[] = {"NONE", "DATA_DRIVEN", "SGSModelType", "SGS_MODEL_", NULL}; 57 58 // Subgrid-Stress mode type 59 typedef enum { 60 SGS_MODEL_DD_FUSED = 0, 61 SGS_MODEL_DD_SEQENTIAL_CEED = 1, 62 SGS_MODEL_DD_SEQENTIAL_TORCH = 2, 63 } SGSModelDDImplementation; 64 static const char *const SGSModelDDImplementations[] = {"FUSED", "SEQUENTIAL_CEED", "SEQUENTIAL_TORCH", "SGSModelDDImplementation", "SGS_MODEL_DD_", 65 NULL}; 66 67 // ----------------------------------------------------------------------------- 68 // Structs 69 // ----------------------------------------------------------------------------- 70 // Structs declarations 71 typedef struct AppCtx_private *AppCtx; 72 typedef struct Units_private *Units; 73 typedef struct SimpleBC_private *SimpleBC; 74 typedef struct Physics_private *Physics; 75 typedef struct ProblemData_private *ProblemData; 76 77 // Application context from user command line options 78 struct AppCtx_private { 79 // libCEED arguments 80 char ceed_resource[PETSC_MAX_PATH_LEN]; // libCEED backend 81 PetscInt degree; 82 PetscInt q_extra; 83 // Solver arguments 84 MatType amat_type; 85 // Post-processing arguments 86 PetscInt checkpoint_interval; 87 PetscInt viz_refine; 88 PetscBool use_continue_file; 89 PetscInt cont_steps; 90 PetscReal cont_time; 91 char cont_file[PETSC_MAX_PATH_LEN]; 92 char output_dir[PETSC_MAX_PATH_LEN]; 93 PetscBool add_stepnum2bin; 94 PetscBool checkpoint_vtk; 95 // Problem type arguments 96 PetscFunctionList problems; 97 char problem_name[PETSC_MAX_PATH_LEN]; 98 // Test mode arguments 99 TestType test_type; 100 PetscScalar test_tol; 101 char test_file_path[PETSC_MAX_PATH_LEN]; 102 // Wall forces 103 struct { 104 PetscInt num_wall; 105 PetscInt *walls; 106 PetscViewer viewer; 107 PetscViewerFormat viewer_format; 108 PetscBool header_written; 109 } wall_forces; 110 // Subgrid Stress Model 111 SGSModelType sgs_model_type; 112 PetscBool sgs_train_enable; 113 114 // Divergence of Diffusive Flux Projection 115 DivDiffFluxProjectionMethod divFdiffproj_method; 116 117 PetscInt check_step_interval; 118 }; 119 120 typedef struct DivDiffFluxProjectionData_ *DivDiffFluxProjectionData; 121 struct DivDiffFluxProjectionData_ { 122 PetscInt num_diff_flux_comps; 123 DivDiffFluxProjectionMethod method; 124 NodalProjectionData projection; 125 126 // CeedOperator Objects 127 CeedElemRestriction elem_restr_div_diff_flux; 128 CeedBasis basis_div_diff_flux; 129 CeedEvalMode eval_mode_div_diff_flux; 130 CeedVector div_diff_flux_ceed; 131 132 // Problem specific setup functions 133 PetscErrorCode (*CreateRHSOperator_Direct)(Honee, DivDiffFluxProjectionData, CeedOperator *); 134 PetscErrorCode (*CreateRHSOperator_Indirect)(Honee, DivDiffFluxProjectionData, CeedOperator *); 135 136 // Only used for direct method: 137 Vec DivDiffFlux_loc; 138 PetscMemType DivDiffFlux_memtype; 139 PetscBool ceed_vec_has_array; 140 141 // Only used for indirect method: 142 OperatorApplyContext calc_div_diff_flux; 143 }; 144 145 typedef struct _HoneeOps *HoneeOps; 146 struct _HoneeOps {}; 147 148 PetscErrorCode HoneeInit(MPI_Comm comm, Honee *honee); 149 PetscErrorCode HoneeDestroy(Honee *honee); 150 151 // PETSc user data 152 struct Honee_private { 153 PETSCHEADER(struct _HoneeOps); 154 MPI_Comm comm; 155 DM dm; 156 DM dm_viz; 157 Mat interp_viz; 158 Ceed ceed; 159 Units units; 160 Vec Q_loc, Q_dot_loc; 161 Physics phys; 162 AppCtx app_ctx; 163 CeedVector q_ceed, q_dot_ceed, g_ceed, x_ceed; 164 CeedOperator op_ifunction; 165 Mat mat_ijacobian; 166 KSP mass_ksp; 167 OperatorApplyContext op_rhs_ctx, op_strong_bc_ctx; 168 CeedScalar time_bc_set; 169 DivDiffFluxProjectionData diff_flux_proj; 170 171 ProblemData problem_data; 172 173 // old CeedData 174 CeedVector x_coord; 175 CeedBasis basis_x; 176 CeedElemRestriction elem_restr_x; 177 OperatorApplyContext op_ics_ctx; 178 179 PetscBool set_poststep; 180 time_t start_time; 181 time_t max_wall_time; 182 PetscInt max_wall_time_interval; 183 }; 184 185 // Units 186 struct Units_private { 187 // fundamental units 188 PetscScalar meter; 189 PetscScalar kilogram; 190 PetscScalar second; 191 PetscScalar Kelvin; 192 // derived units 193 PetscScalar Pascal; 194 PetscScalar J_per_kg_K; 195 PetscScalar m_per_squared_s; 196 PetscScalar W_per_m_K; 197 PetscScalar Joule; 198 }; 199 200 // Struct that contains all enums and structs used for the physics of all problems 201 struct Physics_private { 202 PetscBool implicit; 203 StateVariable state_var; 204 CeedContextFieldLabel solution_time_label; 205 CeedContextFieldLabel stg_solution_time_label; 206 CeedContextFieldLabel timestep_size_label; 207 CeedContextFieldLabel ics_time_label; 208 }; 209 210 typedef struct HoneeBCStruct_ *HoneeBCStruct; 211 struct HoneeBCStruct_ { 212 Honee honee; 213 CeedInt num_comps_jac_data; 214 CeedQFunctionContext qfctx; 215 void *ctx; 216 PetscCtxDestroyFn *DestroyCtx; 217 }; 218 219 PetscErrorCode BoundaryConditionSetUp(Honee honee, ProblemData problem, AppCtx app_ctx); 220 PetscErrorCode HoneeBCDestroy(void **ctx); 221 PetscErrorCode HoneeBCCreateIFunctionQF(BCDefinition bc_def, CeedQFunctionUser qf_func_ptr, const char *qf_loc, CeedQFunctionContext qfctx, 222 CeedQFunction *qf_ifunc); 223 PetscErrorCode HoneeBCCreateIJacobianQF(BCDefinition bc_def, CeedQFunctionUser qf_func_ptr, const char *qf_loc, CeedQFunctionContext qfctx, 224 CeedQFunction *qf_ijac); 225 PetscErrorCode HoneeBCAddIFunctionOp(BCDefinition bc_def, DMLabel domain_label, PetscInt label_value, CeedQFunction qf_ifunc, CeedOperator op_ifunc, 226 CeedOperator *sub_op_ifunc); 227 PetscErrorCode HoneeBCAddIJacobianOp(BCDefinition bc_def, CeedOperator sub_op_ifunc, DMLabel domain_label, PetscInt label_value, 228 CeedQFunction qf_ijac, CeedOperator op_ijac); 229 230 typedef struct { 231 CeedQFunctionUser qf_func_ptr; // !< QFunction function pointer 232 const char *qf_loc; // !< Absolute path to QFunction source file 233 CeedQFunctionContext qfctx; // !< QFunctionContext to attach to QFunction 234 } HoneeQFSpec; 235 236 // Problem specific data 237 struct ProblemData_private { 238 // DM Field Settings 239 PetscInt num_components; 240 char **component_names; 241 242 CeedInt num_comps_jac_data; 243 HoneeQFSpec ics, apply_vol_rhs, apply_vol_ifunction, apply_vol_ijacobian; 244 bool compute_exact_solution_error; 245 PetscBool set_bc_from_ics, use_strong_bc_ceed; 246 247 // BC Definitions 248 PetscCount num_bc_defs; 249 BCDefinition *bc_defs; 250 251 PetscErrorCode (*print_info)(Honee, ProblemData, AppCtx); 252 PetscErrorCode (*create_mass_operator)(Honee, CeedOperator *); 253 }; 254 255 extern int FreeContextPetsc(void *); 256 257 // ----------------------------------------------------------------------------- 258 // Set up problems 259 // ----------------------------------------------------------------------------- 260 // Set up function for each problem 261 extern PetscErrorCode NS_TAYLOR_GREEN(ProblemData problem, DM dm, void *ctx); 262 extern PetscErrorCode NS_GAUSSIAN_WAVE(ProblemData problem, DM dm, void *ctx); 263 extern PetscErrorCode NS_CHANNEL(ProblemData problem, DM dm, void *ctx); 264 extern PetscErrorCode NS_BLASIUS(ProblemData problem, DM dm, void *ctx); 265 extern PetscErrorCode NS_NEWTONIAN_IG(ProblemData problem, DM dm, void *ctx); 266 extern PetscErrorCode NS_DENSITY_CURRENT(ProblemData problem, DM dm, void *ctx); 267 extern PetscErrorCode NS_EULER_VORTEX(ProblemData problem, DM dm, void *ctx); 268 extern PetscErrorCode NS_SHOCKTUBE(ProblemData problem, DM dm, void *ctx); 269 extern PetscErrorCode NS_ADVECTION(ProblemData problem, DM dm, void *ctx); 270 271 PetscErrorCode PrintRunInfo(Honee honee, Physics phys_ctx, ProblemData problem, TS ts); 272 273 // ----------------------------------------------------------------------------- 274 // libCEED functions 275 // ----------------------------------------------------------------------------- 276 PetscErrorCode SetupLibceed(Ceed ceed, DM dm, Honee honee, AppCtx app_ctx, ProblemData problem); 277 278 PetscErrorCode QDataGet(Ceed ceed, DM dm, DMLabel domain_label, PetscInt label_value, CeedElemRestriction *elem_restr_qd, CeedVector *q_data, 279 CeedInt *q_data_size); 280 PetscErrorCode QDataGetNumComponents(DM dm, CeedInt *q_data_size); 281 PetscErrorCode QDataBoundaryGet(Ceed ceed, DM dm, DMLabel domain_label, PetscInt label_value, CeedElemRestriction *elem_restr_qd, CeedVector *q_data, 282 CeedInt *q_data_size); 283 PetscErrorCode QDataBoundaryGetNumComponents(DM dm, CeedInt *q_data_size); 284 PetscErrorCode QDataBoundaryGradientGetNumComponents(DM dm, CeedInt *q_data_size); 285 PetscErrorCode QDataBoundaryGradientGet(Ceed ceed, DM dm, DMLabel domain_label, PetscInt label_value, CeedVector x_coord, 286 CeedElemRestriction *elem_restr_qd, CeedVector *q_data, CeedInt *q_data_size); 287 PetscErrorCode QDataClearStoredData(); 288 // ----------------------------------------------------------------------------- 289 // Time-stepping functions 290 // ----------------------------------------------------------------------------- 291 PetscErrorCode TSSolve_NS(DM dm, Honee honee, AppCtx app_ctx, Physics phys, ProblemData problem, Vec Q, PetscScalar *f_time, TS *ts); 292 PetscErrorCode UpdateBoundaryValues(Honee honee, Vec Q_loc, PetscReal t); 293 294 // ----------------------------------------------------------------------------- 295 // Setup DM 296 // ----------------------------------------------------------------------------- 297 PetscErrorCode CreateDM(Honee honee, ProblemData problem, MatType, VecType, DM *dm); 298 PetscErrorCode SetUpDM(DM dm, ProblemData problem, PetscInt degree, PetscInt q_extra, Physics phys); 299 PetscErrorCode VizRefineDM(DM dm, Honee honee, ProblemData problem, Physics phys); 300 301 // ----------------------------------------------------------------------------- 302 // Process command line options 303 // ----------------------------------------------------------------------------- 304 PetscErrorCode ProcessCommandLineOptions(Honee honee); 305 PetscErrorCode HoneeOptionsSetValueDefault(PetscOptions options, const char name[], const char value[]); 306 307 // ----------------------------------------------------------------------------- 308 // Miscellaneous utility functions 309 // ----------------------------------------------------------------------------- 310 PetscErrorCode GetInverseMultiplicity(Ceed ceed, DM dm, DMLabel domain_label, PetscInt label_value, PetscInt height, PetscInt dm_field, 311 PetscBool get_global_multiplicity, CeedElemRestriction *elem_restr_inv_multiplicity, 312 CeedVector *inv_multiplicity); 313 PetscErrorCode ICs_FixMultiplicity(DM dm, Honee honee, Vec Q_loc, Vec Q, CeedScalar time); 314 315 PetscErrorCode DMPlexInsertBoundaryValues_FromICs(DM dm, PetscBool insert_essential, Vec Q_loc, PetscReal time, Vec face_geom_FVM, Vec cell_geom_FVM, 316 Vec grad_FVM); 317 318 PetscErrorCode RegressionTest(AppCtx app_ctx, Vec Q); 319 PetscErrorCode PrintError(DM dm, Honee honee, Vec Q, PetscScalar final_time); 320 PetscErrorCode PostProcess(TS ts, DM dm, ProblemData problem, Honee honee, Vec Q, PetscScalar final_time); 321 PetscErrorCode SetBCsFromICs(DM dm, Vec Q, Vec Q_loc); 322 PetscErrorCode HoneeMassQFunctionCreate(Ceed ceed, CeedInt N, CeedInt q_data_size, CeedQFunction *qf); 323 PetscErrorCode HoneeCalculateDomainSize(Honee honee, PetscScalar *volume); 324 325 // ----------------------------------------------------------------------------- 326 // Data-Driven Subgrid Stress (DD-SGS) Modeling Functions 327 // ----------------------------------------------------------------------------- 328 PetscErrorCode SgsDDSetup(Ceed ceed, Honee honee, ProblemData problem); 329 PetscErrorCode SgsDDApplyIFunction(Honee honee, const Vec Q_loc, Vec G_loc); 330 PetscErrorCode VelocityGradientProjectionSetup(Ceed ceed, Honee honee, ProblemData problem, StateVariable state_var_input, 331 CeedElemRestriction elem_restr_input, CeedBasis basis_input, NodalProjectionData *pgrad_velo_proj); 332 PetscErrorCode VelocityGradientProjectionApply(NodalProjectionData grad_velo_proj, Vec Q_loc, Vec VelocityGradient); 333 PetscErrorCode GridAnisotropyTensorProjectionSetupApply(Ceed ceed, Honee honee, CeedElemRestriction *elem_restr_grid_aniso, 334 CeedVector *grid_aniso_vector); 335 PetscErrorCode GridAnisotropyTensorCalculateCollocatedVector(Ceed ceed, Honee honee, CeedElemRestriction *elem_restr_grid_aniso, 336 CeedVector *aniso_colloc_ceed, PetscInt *num_comp_aniso); 337 338 // ----------------------------------------------------------------------------- 339 // Boundary Condition Related Functions 340 // ----------------------------------------------------------------------------- 341 PetscErrorCode SetupStrongBC_Ceed(Ceed ceed, DM dm, Honee honee, ProblemData problem); 342 PetscErrorCode FreestreamBCSetup(BCDefinition bc_def, ProblemData problem, DM dm, void *ctx, NewtonianIdealGasContext newtonian_ig_ctx, 343 const StatePrimitive *reference); 344 PetscErrorCode OutflowBCSetup(BCDefinition bc_def, ProblemData problem, DM dm, void *ctx, NewtonianIdealGasContext newtonian_ig_ctx, 345 const StatePrimitive *reference); 346 PetscErrorCode SlipBCSetup(BCDefinition bc_def, ProblemData problem, DM dm, void *ctx, CeedQFunctionContext newtonian_ig_qfctx); 347 348 // ----------------------------------------------------------------------------- 349 // Divergence of Diffusive Flux Projection 350 // ----------------------------------------------------------------------------- 351 PetscErrorCode DivDiffFluxProjectionCreate(Honee honee, DivDiffFluxProjectionMethod divFdiffproj_method, PetscInt num_diff_flux_comps, 352 DivDiffFluxProjectionData *pdiff_flux_proj); 353 PetscErrorCode DivDiffFluxProjectionGetOperatorFieldData(DivDiffFluxProjectionData diff_flux_proj, CeedElemRestriction *elem_restr, CeedBasis *basis, 354 CeedVector *vector, CeedEvalMode *eval_mode); 355 PetscErrorCode DivDiffFluxProjectionSetup(Honee honee, DivDiffFluxProjectionData diff_flux_proj); 356 PetscErrorCode DivDiffFluxProjectionApply(DivDiffFluxProjectionData diff_flux_proj, Vec Q_loc); 357 PetscErrorCode DivDiffFluxProjectionDataDestroy(DivDiffFluxProjectionData diff_flux_proj); 358 359 PetscErrorCode SetupMontiorTotalKineticEnergy(TS ts, PetscViewerAndFormat *ctx); 360 PetscErrorCode TSMonitor_TotalKineticEnergy(TS ts, PetscInt steps, PetscReal solution_time, Vec Q, PetscViewerAndFormat *ctx); 361 362 PetscErrorCode SetupMontiorCfl(TS ts, PetscViewerAndFormat *ctx); 363 PetscErrorCode TSMonitor_Cfl(TS ts, PetscInt step, PetscReal solution_time, Vec Q, PetscViewerAndFormat *ctx); 364 365 PetscErrorCode KSPPostSolve_Honee(KSP ksp, Vec rhs, Vec x, void *ctx); 366