xref: /honee/qfunctions/differential_filter.h (revision 0d8cd81889a18fbc7e30da75e69ab2b87cb23f57)
1 // Copyright (c) 2017-2023, Lawrence Livermore National Security, LLC and other CEED contributors.
2 // All Rights Reserved. See the top-level LICENSE and NOTICE files for details.
3 //
4 // SPDX-License-Identifier: BSD-2-Clause
5 //
6 // This file is part of CEED:  http://github.com/ceed
7 //
8 /// @file
9 /// Implementation of differential filtering
10 
11 #include <ceed.h>
12 
13 #include "newtonian_state.h"
14 #include "newtonian_types.h"
15 #include "utils.h"
16 
17 enum DifferentialFilterStateComponent {
18   DIFF_FILTER_PRESSURE,
19   DIFF_FILTER_VELOCITY_X,
20   DIFF_FILTER_VELOCITY_Y,
21   DIFF_FILTER_VELOCITY_Z,
22   DIFF_FILTER_TEMPERATURE,
23   DIFF_FILTER_STATE_NUM,
24 };
25 
26 enum DifferentialFilterVelocitySquared {
27   DIFF_FILTER_VELOCITY_SQUARED_XX,
28   DIFF_FILTER_VELOCITY_SQUARED_YY,
29   DIFF_FILTER_VELOCITY_SQUARED_ZZ,
30   DIFF_FILTER_VELOCITY_SQUARED_YZ,
31   DIFF_FILTER_VELOCITY_SQUARED_XZ,
32   DIFF_FILTER_VELOCITY_SQUARED_XY,
33   DIFF_FILTER_VELOCITY_SQUARED_NUM,
34 };
35 
36 enum DifferentialFilterDampingFunction { DIFF_FILTER_DAMP_NONE, DIFF_FILTER_DAMP_VAN_DRIEST, DIFF_FILTER_DAMP_MMS };
37 
38 typedef struct DifferentialFilterContext_ *DifferentialFilterContext;
39 struct DifferentialFilterContext_ {
40   bool                                   grid_based_width;
41   CeedScalar                             width_scaling[3];
42   CeedScalar                             kernel_scaling;
43   CeedScalar                             friction_length;
44   enum DifferentialFilterDampingFunction damping_function;
45   CeedScalar                             damping_constant;
46   struct NewtonianIdealGasContext_       gas;
47 };
48 
49 CEED_QFUNCTION_HELPER int DifferentialFilter_RHS(void *ctx, CeedInt Q, const CeedScalar *const *in, CeedScalar *const *out, StateVariable state_var) {
50   const CeedScalar(*q)[CEED_Q_VLA]      = (const CeedScalar(*)[CEED_Q_VLA])in[0];
51   const CeedScalar(*q_data)[CEED_Q_VLA] = (const CeedScalar(*)[CEED_Q_VLA])in[1];
52   CeedScalar(*v0)[CEED_Q_VLA]           = (CeedScalar(*)[CEED_Q_VLA])out[0];
53   CeedScalar(*v1)[CEED_Q_VLA]           = (CeedScalar(*)[CEED_Q_VLA])out[1];
54 
55   DifferentialFilterContext context = (DifferentialFilterContext)ctx;
56   NewtonianIdealGasContext  gas     = &context->gas;
57 
58   CeedPragmaSIMD for (CeedInt i = 0; i < Q; i++) {
59     const CeedScalar qi[5] = {q[0][i], q[1][i], q[2][i], q[3][i], q[4][i]};
60     const CeedScalar wdetJ = q_data[0][i];
61     const State      s     = StateFromQ(gas, qi, state_var);
62 
63     v0[DIFF_FILTER_PRESSURE][i]            = wdetJ * s.Y.pressure;
64     v0[DIFF_FILTER_VELOCITY_X][i]          = wdetJ * s.Y.velocity[0];
65     v0[DIFF_FILTER_VELOCITY_Y][i]          = wdetJ * s.Y.velocity[1];
66     v0[DIFF_FILTER_VELOCITY_Z][i]          = wdetJ * s.Y.velocity[2];
67     v0[DIFF_FILTER_TEMPERATURE][i]         = wdetJ * s.Y.temperature;
68     v1[DIFF_FILTER_VELOCITY_SQUARED_XX][i] = wdetJ * s.Y.velocity[0] * s.Y.velocity[0];
69     v1[DIFF_FILTER_VELOCITY_SQUARED_YY][i] = wdetJ * s.Y.velocity[1] * s.Y.velocity[1];
70     v1[DIFF_FILTER_VELOCITY_SQUARED_ZZ][i] = wdetJ * s.Y.velocity[2] * s.Y.velocity[2];
71     v1[DIFF_FILTER_VELOCITY_SQUARED_YZ][i] = wdetJ * s.Y.velocity[1] * s.Y.velocity[2];
72     v1[DIFF_FILTER_VELOCITY_SQUARED_XZ][i] = wdetJ * s.Y.velocity[0] * s.Y.velocity[2];
73     v1[DIFF_FILTER_VELOCITY_SQUARED_XY][i] = wdetJ * s.Y.velocity[0] * s.Y.velocity[1];
74   }
75   return 0;
76 }
77 
78 CEED_QFUNCTION(DifferentialFilter_RHS_Conserv)(void *ctx, CeedInt Q, const CeedScalar *const *in, CeedScalar *const *out) {
79   return DifferentialFilter_RHS(ctx, Q, in, out, STATEVAR_CONSERVATIVE);
80 }
81 
82 CEED_QFUNCTION(DifferentialFilter_RHS_Prim)(void *ctx, CeedInt Q, const CeedScalar *const *in, CeedScalar *const *out) {
83   return DifferentialFilter_RHS(ctx, Q, in, out, STATEVAR_PRIMITIVE);
84 }
85 
86 CEED_QFUNCTION_HELPER CeedScalar VanDriestWallDamping(const CeedScalar wall_dist_plus, const CeedScalar A_plus) {
87   return -expm1(-wall_dist_plus / A_plus);
88 }
89 
90 CEED_QFUNCTION_HELPER int DifferentialFilter_LHS_N(void *ctx, CeedInt Q, const CeedScalar *const *in, CeedScalar *const *out, const CeedInt N) {
91   const CeedScalar(*q)[CEED_Q_VLA]          = (const CeedScalar(*)[CEED_Q_VLA])in[0];
92   const CeedScalar(*Grad_q)[CEED_Q_VLA]     = (const CeedScalar(*)[CEED_Q_VLA])in[1];
93   const CeedScalar(*A_ij_delta)[CEED_Q_VLA] = (const CeedScalar(*)[CEED_Q_VLA])in[2];
94   const CeedScalar(*x)[CEED_Q_VLA]          = (const CeedScalar(*)[CEED_Q_VLA])in[3];
95   const CeedScalar(*q_data)                 = in[4];
96   CeedScalar(*v)[CEED_Q_VLA]                = (CeedScalar(*)[CEED_Q_VLA])out[0];
97   CeedScalar(*Grad_v)[CEED_Q_VLA]           = (CeedScalar(*)[CEED_Q_VLA])out[1];
98 
99   DifferentialFilterContext context = (DifferentialFilterContext)ctx;
100 
101   CeedPragmaSIMD for (CeedInt i = 0; i < Q; i++) {
102     CeedPragmaSIMD for (CeedInt j = 0; j < N; j++) {
103       const CeedScalar x_i[3] = {x[0][i], x[1][i], x[2][i]};
104       CeedScalar       wdetJ, dXdx[3][3];
105       QdataUnpack_3D(Q, i, q_data, &wdetJ, dXdx);
106 
107       CeedScalar Delta_ij[3][3] = {{0.}};
108       if (context->grid_based_width) {
109         CeedScalar       km_A_ij[6] = {A_ij_delta[0][i], A_ij_delta[1][i], A_ij_delta[2][i], A_ij_delta[3][i], A_ij_delta[4][i], A_ij_delta[5][i]};
110         const CeedScalar delta      = A_ij_delta[6][i];
111         ScaleN(km_A_ij, delta, 6);  // Dimensionalize the normalized anisotropy tensor
112         KMUnpack(km_A_ij, Delta_ij);
113       } else {
114         Delta_ij[0][0] = Delta_ij[1][1] = Delta_ij[2][2] = 1;
115       }
116 
117       CeedScalar scaling_matrix[3][3] = {{0}};
118       if (context->damping_function == DIFF_FILTER_DAMP_VAN_DRIEST) {
119         const CeedScalar damping_coeff = VanDriestWallDamping(x_i[1] / context->friction_length, context->damping_constant);
120         scaling_matrix[0][0]           = Max(1, damping_coeff * context->width_scaling[0]);
121         scaling_matrix[1][1]           = damping_coeff * context->width_scaling[1];
122         scaling_matrix[2][2]           = Max(1, damping_coeff * context->width_scaling[2]);
123       } else if (context->damping_function == DIFF_FILTER_DAMP_NONE) {
124         scaling_matrix[0][0] = context->width_scaling[0];
125         scaling_matrix[1][1] = context->width_scaling[1];
126         scaling_matrix[2][2] = context->width_scaling[2];
127       } else if (context->damping_function == DIFF_FILTER_DAMP_MMS) {
128         const CeedScalar damping_coeff = tanh(60 * x_i[1]);
129         scaling_matrix[0][0]           = 1;
130         scaling_matrix[1][1]           = damping_coeff;
131         scaling_matrix[2][2]           = 1;
132       }
133 
134       CeedScalar scaled_Delta_ij[3][3] = {{0.}};
135       MatMat3(scaling_matrix, Delta_ij, CEED_NOTRANSPOSE, CEED_NOTRANSPOSE, scaled_Delta_ij);
136       CopyMat3(scaled_Delta_ij, Delta_ij);
137 
138       CeedScalar alpha_ij[3][3] = {{0.}};
139       MatMat3(Delta_ij, Delta_ij, CEED_NOTRANSPOSE, CEED_NOTRANSPOSE, alpha_ij);
140       ScaleN((CeedScalar *)alpha_ij, context->kernel_scaling, 9);
141 
142       v[j][i] = wdetJ * q[j][i];
143       CeedScalar dq[3], dq_dXdx[3] = {0.}, dq_dXdx_a[3] = {0.};
144       for (int k = 0; k < 3; k++) {
145         dq[k] = Grad_q[0 * N + j][i] * dXdx[0][k] + Grad_q[1 * N + j][i] * dXdx[1][k] + Grad_q[2 * N + j][i] * dXdx[2][k];
146       }
147       MatVec3(dXdx, dq, CEED_NOTRANSPOSE, dq_dXdx);
148       MatVec3(alpha_ij, dq_dXdx, CEED_NOTRANSPOSE, dq_dXdx_a);
149       for (int k = 0; k < 3; k++) {
150         Grad_v[k * N + j][i] = wdetJ * dq_dXdx_a[k];
151       }
152     }
153   }
154   return 0;
155 }
156 
157 CEED_QFUNCTION(DifferentialFilter_LHS_1)(void *ctx, CeedInt Q, const CeedScalar *const *in, CeedScalar *const *out) {
158   return DifferentialFilter_LHS_N(ctx, Q, in, out, 1);
159 }
160 
161 CEED_QFUNCTION(DifferentialFilter_LHS_5)(void *ctx, CeedInt Q, const CeedScalar *const *in, CeedScalar *const *out) {
162   return DifferentialFilter_LHS_N(ctx, Q, in, out, 5);
163 }
164 
165 CEED_QFUNCTION(DifferentialFilter_LHS_6)(void *ctx, CeedInt Q, const CeedScalar *const *in, CeedScalar *const *out) {
166   return DifferentialFilter_LHS_N(ctx, Q, in, out, 6);
167 }
168 
169 CEED_QFUNCTION(DifferentialFilter_LHS_11)(void *ctx, CeedInt Q, const CeedScalar *const *in, CeedScalar *const *out) {
170   return DifferentialFilter_LHS_N(ctx, Q, in, out, 11);
171 }
172 
173 CEED_QFUNCTION_HELPER CeedScalar MMS_Solution(const CeedScalar x_i[3], const CeedScalar omega) {
174   return sin(6 * omega * x_i[0]) + sin(6 * omega * x_i[1]);
175 }
176 
177 CEED_QFUNCTION(DifferentialFilter_MMS_RHS)(void *ctx, CeedInt Q, const CeedScalar *const *in, CeedScalar *const *out) {
178   const CeedScalar(*q)[CEED_Q_VLA]      = (const CeedScalar(*)[CEED_Q_VLA])in[0];
179   const CeedScalar(*q_data)[CEED_Q_VLA] = (const CeedScalar(*)[CEED_Q_VLA])in[1];
180   CeedScalar(*v)[CEED_Q_VLA]            = (CeedScalar(*)[CEED_Q_VLA])out[0];
181 
182   CeedPragmaSIMD for (CeedInt i = 0; i < Q; i++) {
183     const CeedScalar wdetJ = q_data[0][i];
184     v[0][i]                = wdetJ * q[0][i];
185   }
186   return 0;
187 }
188 
189 // @brief Generate initial condition such that the solution of the differential filtering is given by MMS_Solution() above
190 //
191 // This requires a *very* specific grid, as the anisotropic filtering is grid dependent.
192 // It's for a 75x75x1 grid on a [0,0.5]x3 domain.
193 // The grid is evenly distributed in x, but distributed based on the analytical mesh distribution \Delta_y = .001 + .01*tanh(6*y).
194 // The MMS test can optionally include a wall damping function (must also be enabled for the differential filtering itself).
195 // It can be run via:
196 // ./navierstokes -options_file tests-output/blasius_test.yaml -diff_filter_monitor -diff_filter_view cgns:filtered_solution.cgns -ts_max_steps 0
197 // -diff_filter_mms -diff_filter_kernel_scaling 1 -diff_filter_wall_damping_function mms -dm_plex_box_upper 0.5,0.5,0.5 -dm_plex_box_faces 75,75,1
198 // -mesh_transform platemesh -platemesh_y_node_locs_path tests-output/diff_filter_mms_y_spacing.dat -platemesh_top_angle 0
199 // -diff_filter_grid_based_width
200 CEED_QFUNCTION(DifferentialFilter_MMS_IC)(void *ctx, CeedInt Q, const CeedScalar *const *in, CeedScalar *const *out) {
201   const CeedScalar(*x)[CEED_Q_VLA] = (const CeedScalar(*)[CEED_Q_VLA])in[0];
202   CeedScalar(*q0)[CEED_Q_VLA]      = (CeedScalar(*)[CEED_Q_VLA])out[0];
203 
204   CeedPragmaSIMD for (CeedInt i = 0; i < Q; i++) {
205     const CeedScalar x_i[3] = {x[0][i], x[1][i], x[2][i]};
206 
207     const CeedScalar aniso_scale_factor = 1;  // Must match the one passed in by -diff_filter_aniso_scale
208     const CeedScalar omega              = 2 * M_PI;
209     const CeedScalar omega6             = 6 * omega;
210     const CeedScalar phi_bar            = MMS_Solution(x_i, omega);
211     const CeedScalar dx                 = 0.5 / 75;
212     const CeedScalar dy_analytic        = .001 + .01 * tanh(6 * x_i[1]);
213     const CeedScalar dy                 = dy_analytic;
214     const CeedScalar d_dy_dy            = 0.06 * Square(1 / cosh(6 * x_i[1]));  // Change of \Delta_y w.r.t. y
215     CeedScalar       alpha[2]           = {Square(dx) * aniso_scale_factor, Square(dy) * aniso_scale_factor};
216     bool             damping            = true;
217     CeedScalar       dalpha1dy;
218     if (damping) {
219       CeedScalar damping_coeff   = tanh(60 * x_i[1]);
220       CeedScalar d_damping_coeff = 60 / Square(cosh(60 * x_i[1]));
221       dalpha1dy                  = aniso_scale_factor * 2 * (damping_coeff * dy) * (dy * d_damping_coeff + damping_coeff * d_dy_dy);
222       alpha[1] *= Square(damping_coeff);
223     } else {
224       dalpha1dy = aniso_scale_factor * 2 * dy * d_dy_dy;
225     }
226 
227     CeedScalar phi = phi_bar + alpha[0] * Square(omega6) * sin(6 * omega * x_i[0]) + alpha[1] * Square(omega6) * sin(omega6 * x_i[1]);
228     phi -= dalpha1dy * omega6 * cos(omega6 * x_i[1]);
229 
230     for (CeedInt j = 0; j < 5; j++) q0[j][i] = phi;
231   }
232   return 0;
233 }
234